0s autopkgtest [01:43:17]: starting date and time: 2026-02-10 01:43:17+0000
  0s autopkgtest [01:43:17]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op
  0s autopkgtest [01:43:17]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.swuga0e4/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:lattice --apt-upgrade r-bioc-gviz --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=lattice/0.22-9-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-amd64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@sto01-11.secgroup --name adt-resolute-amd64-r-bioc-gviz-20260210-014317-juju-7f2275-prod-proposed-migration-environment-2-60e48575-3282-415f-a4c7-35f6758c6690 --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-autopkgtest-workers-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/
  4s Creating nova instance adt-resolute-amd64-r-bioc-gviz-20260210-014317-juju-7f2275-prod-proposed-migration-environment-2-60e48575-3282-415f-a4c7-35f6758c6690 from image adt/ubuntu-resolute-amd64-server-20260204.img (UUID fedf54b4-458b-493e-8072-6425c19717b4)...
 78s autopkgtest [01:44:35]: testbed dpkg architecture: amd64
 78s autopkgtest [01:44:35]: testbed apt version: 3.1.14
 78s autopkgtest [01:44:35]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 78s autopkgtest [01:44:35]: testbed release detected to be: None
 79s autopkgtest [01:44:36]: updating testbed package index (apt update)
 79s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB]
 79s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
 79s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
 79s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
 79s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [29.4 kB]
 79s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [173 kB]
 79s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1637 kB]
 80s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [253 kB]
 80s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [201 kB]
 80s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [5996 B]
 80s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [316 B]
 80s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [639 kB]
 80s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [1584 kB]
 80s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [33.3 kB]
 80s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [25.2 kB]
 80s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [4320 B]
 80s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [996 B]
 81s Fetched 4710 kB in 1s (6534 kB/s)
 81s Reading package lists...
 82s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease
 82s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
 82s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
 82s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
 83s Reading package lists...
 83s Reading package lists...
 83s Building dependency tree...
 83s Reading state information...
 84s Calculating upgrade...
 84s The following package was automatically installed and is no longer required:
 84s   libpython3.13
 84s Use 'sudo apt autoremove' to remove it.
 84s The following NEW packages will be installed:
 84s   gcc-16-base libpython3.14 libpython3.14-minimal libpython3.14-stdlib
 84s   linux-headers-6.19.0-3 linux-headers-6.19.0-3-generic
 84s   linux-image-6.19.0-3-generic linux-modules-6.19.0-3-generic
 84s   linux-tools-6.19.0-3 linux-tools-6.19.0-3-generic
 84s The following packages will be upgraded:
 84s   3cpio amd64-microcode apt bpftool busybox-initramfs busybox-static
 84s   cryptsetup-bin dash dbus dbus-bin dbus-daemon dbus-session-bus-common
 84s   dbus-system-bus-common dbus-user-session debianutils dmsetup dracut-install
 84s   ethtool findutils gir1.2-girepository-3.0 gir1.2-glib-2.0 hwdata iproute2
 84s   iptables less libapt-pkg7.0 libatomic1 libattr1 libbpf1 libbsd0
 84s   libcryptsetup12 libdbus-1-3 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common
 84s   libdrm2 libevent-core-2.1-7t64 libgcc-s1 libgdbm-compat4t64 libgdbm6t64
 84s   libgirepository-2.0-0 libglib2.0-0t64 libglib2.0-data libgpm2 libgudev-1.0-0
 84s   libidn2-0 libip4tc2 libip6tc2 libjansson4 libkeyutils1 liblsof0
 84s   libmaxminddb0 libnetfilter-conntrack3 libnpth0t64 libonig5 libpcap0.8t64
 84s   libpci3 libsensors-config libsensors5 libstdc++6 libusb-1.0-0 libwrap0
 84s   libxau6 libxkbcommon0 libxtables12 linux-generic linux-headers-generic
 84s   linux-headers-virtual linux-image-generic linux-image-virtual linux-perf
 84s   linux-tools-common linux-virtual lsof man-db mawk patch pciutils pnp.ids
 84s   pollinate python3-linkify-it python3-markdown-it python3-referencing sed
 84s   shared-mime-info tar tcpdump ubuntu-kernel-accessories ubuntu-standard wget
 84s 90 upgraded, 10 newly installed, 0 to remove and 0 not upgraded.
 84s Need to get 237 MB of archives.
 84s After this operation, 339 MB of additional disk space will be used.
 84s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 debianutils amd64 5.23.2build1 [93.3 kB]
 84s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 dash amd64 0.5.12-12ubuntu3 [96.0 kB]
 84s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 findutils amd64 4.10.0-3build2 [307 kB]
 84s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 sed amd64 4.9-2build3 [195 kB]
 84s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 tar amd64 1.35+dfsg-3.1build2 [257 kB]
 84s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libattr1 amd64 1:2.5.2-3build2 [11.4 kB]
 84s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-16-base amd64 16-20260208-1ubuntu1 [59.7 kB]
 84s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-s1 amd64 16-20260208-1ubuntu1 [80.3 kB]
 84s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libbsd0 amd64 0.12.2-2build2 [42.3 kB]
 84s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 mawk amd64 1.3.4.20260129-1 [133 kB]
 84s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++6 amd64 16-20260208-1ubuntu1 [844 kB]
 84s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libapt-pkg7.0 amd64 3.1.15 [1151 kB]
 84s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 apt amd64 3.1.15 [1479 kB]
 85s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-system-bus-common all 1.16.2-2ubuntu3 [55.8 kB]
 85s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-session-bus-common all 1.16.2-2ubuntu3 [54.4 kB]
 85s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-user-session amd64 1.16.2-2ubuntu3 [9696 B]
 85s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-daemon amd64 1.16.2-2ubuntu3 [119 kB]
 85s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-bin amd64 1.16.2-2ubuntu3 [40.1 kB]
 85s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus amd64 1.16.2-2ubuntu3 [24.2 kB]
 85s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libdbus-1-3 amd64 1.16.2-2ubuntu3 [185 kB]
 85s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libdevmapper1.02.1 amd64 2:1.02.205-2ubuntu3 [142 kB]
 85s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 dmsetup amd64 2:1.02.205-2ubuntu3 [79.4 kB]
 85s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 ethtool amd64 1:6.15-3build1 [318 kB]
 85s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-girepository-3.0 amd64 2.87.2-2 [25.2 kB]
 85s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libgirepository-2.0-0 amd64 2.87.2-2 [76.1 kB]
 85s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libatomic1 amd64 16-20260208-1ubuntu1 [11.4 kB]
 85s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-glib-2.0 amd64 2.87.2-2 [182 kB]
 85s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-0t64 amd64 2.87.2-2 [1613 kB]
 85s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libbpf1 amd64 1:1.6.2-1build1 [184 kB]
 85s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 iptables amd64 1.8.11-2ubuntu3 [381 kB]
 85s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libip4tc2 amd64 1.8.11-2ubuntu3 [24.2 kB]
 85s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libip6tc2 amd64 1.8.11-2ubuntu3 [24.4 kB]
 85s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 libnetfilter-conntrack3 amd64 1.1.1-1 [47.5 kB]
 85s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 libxtables12 amd64 1.8.11-2ubuntu3 [36.6 kB]
 85s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 iproute2 amd64 6.18.0-1ubuntu1 [1178 kB]
 85s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 less amd64 668-1build1 [172 kB]
 85s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libcryptsetup12 amd64 2:2.8.0-1ubuntu3 [283 kB]
 85s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-data all 2.87.2-2 [58.2 kB]
 85s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libidn2-0 amd64 2.3.8-4build1 [67.6 kB]
 85s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libkeyutils1 amd64 1.6.3-6ubuntu3 [10.6 kB]
 85s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-linkify-it all 2.0.3-1ubuntu3 [19.4 kB]
 85s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-markdown-it all 3.0.0-3build1 [54.4 kB]
 85s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 shared-mime-info amd64 2.4-5build3 [476 kB]
 85s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-static amd64 1:1.37.0-7ubuntu1 [1034 kB]
 85s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-common all 2.4.131-1 [9774 B]
 85s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm2 amd64 2.4.131-1 [42.3 kB]
 85s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm6t64 amd64 1.26-1build1 [36.5 kB]
 85s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libgpm2 amd64 1.20.7-12build1 [14.4 kB]
 85s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libjansson4 amd64 2.14-2build4 [33.2 kB]
 85s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 lsof amd64 4.99.4+dfsg-2build2 [239 kB]
 85s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsof0 amd64 4.99.4+dfsg-2build2 [56.5 kB]
 85s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libmaxminddb0 amd64 1.12.2-1build2 [18.9 kB]
 85s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcap0.8t64 amd64 1.10.5-2ubuntu3 [154 kB]
 85s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 pciutils amd64 1:3.14.0-1build2 [95.5 kB]
 85s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libpci3 amd64 1:3.14.0-1build2 [38.1 kB]
 85s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors-config all 1:3.6.2-2build1 [6862 B]
 85s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors5 amd64 1:3.6.2-2build1 [28.9 kB]
 85s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libusb-1.0-0 amd64 2:1.0.29-2build1 [56.9 kB]
 85s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libxau6 amd64 1:1.0.11-1build2 [7502 B]
 85s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libxkbcommon0 amd64 1.13.1-1 [159 kB]
 85s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 man-db amd64 2.13.1-1build1 [1392 kB]
 85s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 tcpdump amd64 4.99.5-2ubuntu3 [477 kB]
 85s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 wget amd64 1.25.0-2ubuntu4 [353 kB]
 85s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-standard amd64 1.564 [13.3 kB]
 85s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 3cpio amd64 0.14.0-1ubuntu1 [285 kB]
 85s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 bpftool amd64 7.7.0+6.19.0-3.3 [1229 kB]
 86s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-initramfs amd64 1:1.37.0-7ubuntu1 [191 kB]
 86s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 cryptsetup-bin amd64 2:2.8.0-1ubuntu3 [228 kB]
 86s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 dracut-install amd64 109-11ubuntu1 [45.8 kB]
 86s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 hwdata all 0.394-1build1 [1566 B]
 86s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 pnp.ids all 0.394-1build1 [29.6 kB]
 86s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-amdgpu1 amd64 2.4.131-1 [23.2 kB]
 86s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10build2 [93.1 kB]
 86s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm-compat4t64 amd64 1.26-1build1 [6796 B]
 86s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libgudev-1.0-0 amd64 1:238-7build1 [15.9 kB]
 86s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libnpth0t64 amd64 1.8-3build1 [9302 B]
 86s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libonig5 amd64 6.9.10-1build1 [174 kB]
 86s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-minimal amd64 3.14.2-1 [920 kB]
 86s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-stdlib amd64 3.14.2-1 [2398 kB]
 87s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14 amd64 3.14.2-1 [2568 kB]
 87s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 libwrap0 amd64 7.6.q-36build2 [48.5 kB]
 87s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-modules-6.19.0-3-generic amd64 6.19.0-3.3 [171 MB]
 96s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-6.19.0-3-generic amd64 6.19.0-3.3+1 [16.8 MB]
 96s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 amd64-microcode amd64 3.20251202.1ubuntu1 [459 kB]
 96s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-generic amd64 6.19.0-3.3 [1698 B]
 96s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-generic amd64 6.19.0-3.3 [12.2 kB]
 96s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-virtual amd64 6.19.0-3.3 [1700 B]
 96s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-virtual amd64 6.19.0-3.3 [12.1 kB]
 96s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-virtual amd64 6.19.0-3.3 [1646 B]
 96s Get:90 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3 all 6.19.0-3.3 [14.9 MB]
 97s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3-generic amd64 6.19.0-3.3 [4330 kB]
 97s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-generic amd64 6.19.0-3.3 [12.0 kB]
 97s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-perf amd64 6.19.0-3.3 [4480 kB]
 97s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-common all 6.19.0-3.3 [345 kB]
 97s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3 amd64 6.19.0-3.3 [1455 kB]
 97s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3-generic amd64 6.19.0-3.3 [1612 B]
 97s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 patch amd64 2.8-2build1 [95.7 kB]
 97s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 pollinate all 4.33-4ubuntu5 [14.0 kB]
 97s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-referencing all 0.36.2-1ubuntu2 [22.2 kB]
 97s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-kernel-accessories amd64 1.564 [13.1 kB]
 97s dpkg-preconfigure: unable to re-open stdin: No such file or directory
 97s Fetched 237 MB in 13s (17.6 MB/s)
 98s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83957 files and directories currently installed.)
 98s Preparing to unpack .../debianutils_5.23.2build1_amd64.deb ...
 98s Unpacking debianutils (5.23.2build1) over (5.23.2) ...
 98s Setting up debianutils (5.23.2build1) ...
 98s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83957 files and directories currently installed.)
 98s Preparing to unpack .../dash_0.5.12-12ubuntu3_amd64.deb ...
 98s Unpacking dash (0.5.12-12ubuntu3) over (0.5.12-12ubuntu2) ...
 98s Setting up dash (0.5.12-12ubuntu3) ...
 98s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83957 files and directories currently installed.)
 98s Preparing to unpack .../findutils_4.10.0-3build2_amd64.deb ...
 98s Unpacking findutils (4.10.0-3build2) over (4.10.0-3build1) ...
 98s Setting up findutils (4.10.0-3build2) ...
 98s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83957 files and directories currently installed.)
 98s Preparing to unpack .../sed_4.9-2build3_amd64.deb ...
 98s Unpacking sed (4.9-2build3) over (4.9-2build2) ...
 98s Setting up sed (4.9-2build3) ...
 98s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83957 files and directories currently installed.)
 98s Preparing to unpack .../tar_1.35+dfsg-3.1build2_amd64.deb ...
 98s Unpacking tar (1.35+dfsg-3.1build2) over (1.35+dfsg-3.1build1) ...
 98s Setting up tar (1.35+dfsg-3.1build2) ...
 99s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83957 files and directories currently installed.)
 99s Preparing to unpack .../libattr1_1%3a2.5.2-3build2_amd64.deb ...
 99s Unpacking libattr1:amd64 (1:2.5.2-3build2) over (1:2.5.2-3build1) ...
 99s Setting up libattr1:amd64 (1:2.5.2-3build2) ...
 99s Selecting previously unselected package gcc-16-base:amd64.
 99s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83957 files and directories currently installed.)
 99s Preparing to unpack .../gcc-16-base_16-20260208-1ubuntu1_amd64.deb ...
 99s Unpacking gcc-16-base:amd64 (16-20260208-1ubuntu1) ...
 99s Setting up gcc-16-base:amd64 (16-20260208-1ubuntu1) ...
 99s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83962 files and directories currently installed.)
 99s Preparing to unpack .../libgcc-s1_16-20260208-1ubuntu1_amd64.deb ...
 99s Unpacking libgcc-s1:amd64 (16-20260208-1ubuntu1) over (15.2.0-12ubuntu1) ...
 99s Setting up libgcc-s1:amd64 (16-20260208-1ubuntu1) ...
 99s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83962 files and directories currently installed.)
 99s Preparing to unpack .../00-libbsd0_0.12.2-2build2_amd64.deb ...
 99s Unpacking libbsd0:amd64 (0.12.2-2build2) over (0.12.2-2build1) ...
 99s Preparing to unpack .../01-mawk_1.3.4.20260129-1_amd64.deb ...
 99s Unpacking mawk (1.3.4.20260129-1) over (1.3.4.20250131-2) ...
 99s Preparing to unpack .../02-libstdc++6_16-20260208-1ubuntu1_amd64.deb ...
 99s Unpacking libstdc++6:amd64 (16-20260208-1ubuntu1) over (15.2.0-12ubuntu1) ...
 99s Preparing to unpack .../03-libapt-pkg7.0_3.1.15_amd64.deb ...
 99s Unpacking libapt-pkg7.0:amd64 (3.1.15) over (3.1.14) ...
 99s Preparing to unpack .../04-apt_3.1.15_amd64.deb ...
 99s Unpacking apt (3.1.15) over (3.1.14) ...
 99s Preparing to unpack .../05-dbus-system-bus-common_1.16.2-2ubuntu3_all.deb ...
 99s Unpacking dbus-system-bus-common (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ...
 99s Preparing to unpack .../06-dbus-session-bus-common_1.16.2-2ubuntu3_all.deb ...
 99s Unpacking dbus-session-bus-common (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ...
 99s Preparing to unpack .../07-dbus-user-session_1.16.2-2ubuntu3_amd64.deb ...
 99s Unpacking dbus-user-session (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ...
 99s Preparing to unpack .../08-dbus-daemon_1.16.2-2ubuntu3_amd64.deb ...
 99s Unpacking dbus-daemon (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ...
 99s Preparing to unpack .../09-dbus-bin_1.16.2-2ubuntu3_amd64.deb ...
 99s Unpacking dbus-bin (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ...
 99s Preparing to unpack .../10-dbus_1.16.2-2ubuntu3_amd64.deb ...
 99s Unpacking dbus (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ...
100s Preparing to unpack .../11-libdbus-1-3_1.16.2-2ubuntu3_amd64.deb ...
100s Unpacking libdbus-1-3:amd64 (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ...
100s Preparing to unpack .../12-libdevmapper1.02.1_2%3a1.02.205-2ubuntu3_amd64.deb ...
100s Unpacking libdevmapper1.02.1:amd64 (2:1.02.205-2ubuntu3) over (2:1.02.205-2ubuntu2) ...
100s Preparing to unpack .../13-dmsetup_2%3a1.02.205-2ubuntu3_amd64.deb ...
100s Unpacking dmsetup (2:1.02.205-2ubuntu3) over (2:1.02.205-2ubuntu2) ...
100s Preparing to unpack .../14-ethtool_1%3a6.15-3build1_amd64.deb ...
100s Unpacking ethtool (1:6.15-3build1) over (1:6.15-3) ...
100s Preparing to unpack .../15-gir1.2-girepository-3.0_2.87.2-2_amd64.deb ...
100s Unpacking gir1.2-girepository-3.0:amd64 (2.87.2-2) over (2.86.3-4) ...
100s Preparing to unpack .../16-libgirepository-2.0-0_2.87.2-2_amd64.deb ...
100s Unpacking libgirepository-2.0-0:amd64 (2.87.2-2) over (2.86.3-4) ...
100s Preparing to unpack .../17-libatomic1_16-20260208-1ubuntu1_amd64.deb ...
100s Unpacking libatomic1:amd64 (16-20260208-1ubuntu1) over (15.2.0-12ubuntu1) ...
100s Preparing to unpack .../18-gir1.2-glib-2.0_2.87.2-2_amd64.deb ...
100s Unpacking gir1.2-glib-2.0:amd64 (2.87.2-2) over (2.86.3-4) ...
100s Preparing to unpack .../19-libglib2.0-0t64_2.87.2-2_amd64.deb ...
100s Unpacking libglib2.0-0t64:amd64 (2.87.2-2) over (2.86.3-4) ...
100s Preparing to unpack .../20-libbpf1_1%3a1.6.2-1build1_amd64.deb ...
100s Unpacking libbpf1:amd64 (1:1.6.2-1build1) over (1:1.6.2-1) ...
100s Preparing to unpack .../21-iptables_1.8.11-2ubuntu3_amd64.deb ...
100s Unpacking iptables (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ...
100s Preparing to unpack .../22-libip4tc2_1.8.11-2ubuntu3_amd64.deb ...
100s Unpacking libip4tc2:amd64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ...
100s Preparing to unpack .../23-libip6tc2_1.8.11-2ubuntu3_amd64.deb ...
100s Unpacking libip6tc2:amd64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ...
100s Preparing to unpack .../24-libnetfilter-conntrack3_1.1.1-1_amd64.deb ...
100s Unpacking libnetfilter-conntrack3:amd64 (1.1.1-1) over (1.1.0-1build1) ...
100s Preparing to unpack .../25-libxtables12_1.8.11-2ubuntu3_amd64.deb ...
100s Unpacking libxtables12:amd64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ...
100s Preparing to unpack .../26-iproute2_6.18.0-1ubuntu1_amd64.deb ...
100s Unpacking iproute2 (6.18.0-1ubuntu1) over (6.16.0-1ubuntu3) ...
101s Preparing to unpack .../27-less_668-1build1_amd64.deb ...
101s Unpacking less (668-1build1) over (668-1) ...
101s Preparing to unpack .../28-libcryptsetup12_2%3a2.8.0-1ubuntu3_amd64.deb ...
101s Unpacking libcryptsetup12:amd64 (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ...
101s Preparing to unpack .../29-libglib2.0-data_2.87.2-2_all.deb ...
101s Unpacking libglib2.0-data (2.87.2-2) over (2.86.3-4) ...
101s Preparing to unpack .../30-libidn2-0_2.3.8-4build1_amd64.deb ...
101s Unpacking libidn2-0:amd64 (2.3.8-4build1) over (2.3.8-4) ...
101s Preparing to unpack .../31-libkeyutils1_1.6.3-6ubuntu3_amd64.deb ...
101s Unpacking libkeyutils1:amd64 (1.6.3-6ubuntu3) over (1.6.3-6ubuntu2) ...
101s Preparing to unpack .../32-python3-linkify-it_2.0.3-1ubuntu3_all.deb ...
101s Unpacking python3-linkify-it (2.0.3-1ubuntu3) over (2.0.3-1ubuntu2) ...
101s Preparing to unpack .../33-python3-markdown-it_3.0.0-3build1_all.deb ...
101s Unpacking python3-markdown-it (3.0.0-3build1) over (3.0.0-3) ...
101s Preparing to unpack .../34-shared-mime-info_2.4-5build3_amd64.deb ...
101s Unpacking shared-mime-info (2.4-5build3) over (2.4-5build2) ...
101s Preparing to unpack .../35-busybox-static_1%3a1.37.0-7ubuntu1_amd64.deb ...
101s Unpacking busybox-static (1:1.37.0-7ubuntu1) over (1:1.37.0-4ubuntu1) ...
101s Preparing to unpack .../36-libdrm-common_2.4.131-1_all.deb ...
101s Unpacking libdrm-common (2.4.131-1) over (2.4.129-1) ...
101s Preparing to unpack .../37-libdrm2_2.4.131-1_amd64.deb ...
101s Unpacking libdrm2:amd64 (2.4.131-1) over (2.4.129-1) ...
101s Preparing to unpack .../38-libgdbm6t64_1.26-1build1_amd64.deb ...
101s Unpacking libgdbm6t64:amd64 (1.26-1build1) over (1.26-1) ...
101s Preparing to unpack .../39-libgpm2_1.20.7-12build1_amd64.deb ...
101s Unpacking libgpm2:amd64 (1.20.7-12build1) over (1.20.7-12) ...
101s Preparing to unpack .../40-libjansson4_2.14-2build4_amd64.deb ...
101s Unpacking libjansson4:amd64 (2.14-2build4) over (2.14-2build3) ...
101s Preparing to unpack .../41-lsof_4.99.4+dfsg-2build2_amd64.deb ...
101s Unpacking lsof (4.99.4+dfsg-2build2) over (4.99.4+dfsg-2build1) ...
102s Preparing to unpack .../42-liblsof0_4.99.4+dfsg-2build2_amd64.deb ...
102s Unpacking liblsof0 (4.99.4+dfsg-2build2) over (4.99.4+dfsg-2build1) ...
102s Preparing to unpack .../43-libmaxminddb0_1.12.2-1build2_amd64.deb ...
102s Unpacking libmaxminddb0:amd64 (1.12.2-1build2) over (1.12.2-1build1) ...
102s Preparing to unpack .../44-libpcap0.8t64_1.10.5-2ubuntu3_amd64.deb ...
102s Unpacking libpcap0.8t64:amd64 (1.10.5-2ubuntu3) over (1.10.5-2ubuntu2) ...
102s Preparing to unpack .../45-pciutils_1%3a3.14.0-1build2_amd64.deb ...
102s Unpacking pciutils (1:3.14.0-1build2) over (1:3.14.0-1build1) ...
102s Preparing to unpack .../46-libpci3_1%3a3.14.0-1build2_amd64.deb ...
102s Unpacking libpci3:amd64 (1:3.14.0-1build2) over (1:3.14.0-1build1) ...
102s Preparing to unpack .../47-libsensors-config_1%3a3.6.2-2build1_all.deb ...
102s Unpacking libsensors-config (1:3.6.2-2build1) over (1:3.6.2-2) ...
102s Preparing to unpack .../48-libsensors5_1%3a3.6.2-2build1_amd64.deb ...
102s Unpacking libsensors5:amd64 (1:3.6.2-2build1) over (1:3.6.2-2) ...
102s Preparing to unpack .../49-libusb-1.0-0_2%3a1.0.29-2build1_amd64.deb ...
102s Unpacking libusb-1.0-0:amd64 (2:1.0.29-2build1) over (2:1.0.29-2) ...
102s Preparing to unpack .../50-libxau6_1%3a1.0.11-1build2_amd64.deb ...
102s Unpacking libxau6:amd64 (1:1.0.11-1build2) over (1:1.0.11-1build1) ...
102s Preparing to unpack .../51-libxkbcommon0_1.13.1-1_amd64.deb ...
102s Unpacking libxkbcommon0:amd64 (1.13.1-1) over (1.12.3-1) ...
102s Preparing to unpack .../52-man-db_2.13.1-1build1_amd64.deb ...
102s Unpacking man-db (2.13.1-1build1) over (2.13.1-1) ...
102s Preparing to unpack .../53-tcpdump_4.99.5-2ubuntu3_amd64.deb ...
102s Unpacking tcpdump (4.99.5-2ubuntu3) over (4.99.5-2ubuntu2) ...
102s Preparing to unpack .../54-wget_1.25.0-2ubuntu4_amd64.deb ...
102s Unpacking wget (1.25.0-2ubuntu4) over (1.25.0-2ubuntu3) ...
102s Preparing to unpack .../55-ubuntu-standard_1.564_amd64.deb ...
102s Unpacking ubuntu-standard (1.564) over (1.563) ...
102s Preparing to unpack .../56-3cpio_0.14.0-1ubuntu1_amd64.deb ...
102s Unpacking 3cpio (0.14.0-1ubuntu1) over (0.13.1-1ubuntu1) ...
102s Preparing to unpack .../57-bpftool_7.7.0+6.19.0-3.3_amd64.deb ...
102s Unpacking bpftool (7.7.0+6.19.0-3.3) over (7.7.0+6.18.0-9.9) ...
102s Preparing to unpack .../58-busybox-initramfs_1%3a1.37.0-7ubuntu1_amd64.deb ...
102s Unpacking busybox-initramfs (1:1.37.0-7ubuntu1) over (1:1.37.0-4ubuntu1) ...
102s Preparing to unpack .../59-cryptsetup-bin_2%3a2.8.0-1ubuntu3_amd64.deb ...
102s Unpacking cryptsetup-bin (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ...
102s Preparing to unpack .../60-dracut-install_109-11ubuntu1_amd64.deb ...
103s Unpacking dracut-install (109-11ubuntu1) over (109-9ubuntu1) ...
103s Preparing to unpack .../61-hwdata_0.394-1build1_all.deb ...
103s Unpacking hwdata (0.394-1build1) over (0.394-1) ...
103s Preparing to unpack .../62-pnp.ids_0.394-1build1_all.deb ...
103s Unpacking pnp.ids (0.394-1build1) over (0.394-1) ...
103s Preparing to unpack .../63-libdrm-amdgpu1_2.4.131-1_amd64.deb ...
103s Unpacking libdrm-amdgpu1:amd64 (2.4.131-1) over (2.4.129-1) ...
103s Preparing to unpack .../64-libevent-core-2.1-7t64_2.1.12-stable-10build2_amd64.deb ...
103s Unpacking libevent-core-2.1-7t64:amd64 (2.1.12-stable-10build2) over (2.1.12-stable-10build1) ...
103s Preparing to unpack .../65-libgdbm-compat4t64_1.26-1build1_amd64.deb ...
103s Unpacking libgdbm-compat4t64:amd64 (1.26-1build1) over (1.26-1) ...
103s Preparing to unpack .../66-libgudev-1.0-0_1%3a238-7build1_amd64.deb ...
103s Unpacking libgudev-1.0-0:amd64 (1:238-7build1) over (1:238-7) ...
103s Preparing to unpack .../67-libnpth0t64_1.8-3build1_amd64.deb ...
103s Unpacking libnpth0t64:amd64 (1.8-3build1) over (1.8-3) ...
103s Preparing to unpack .../68-libonig5_6.9.10-1build1_amd64.deb ...
103s Unpacking libonig5:amd64 (6.9.10-1build1) over (6.9.10-1) ...
103s Selecting previously unselected package libpython3.14-minimal:amd64.
103s Preparing to unpack .../69-libpython3.14-minimal_3.14.2-1_amd64.deb ...
103s Unpacking libpython3.14-minimal:amd64 (3.14.2-1) ...
103s Selecting previously unselected package libpython3.14-stdlib:amd64.
103s Preparing to unpack .../70-libpython3.14-stdlib_3.14.2-1_amd64.deb ...
103s Unpacking libpython3.14-stdlib:amd64 (3.14.2-1) ...
103s Selecting previously unselected package libpython3.14:amd64.
103s Preparing to unpack .../71-libpython3.14_3.14.2-1_amd64.deb ...
103s Unpacking libpython3.14:amd64 (3.14.2-1) ...
103s Preparing to unpack .../72-libwrap0_7.6.q-36build2_amd64.deb ...
103s Unpacking libwrap0:amd64 (7.6.q-36build2) over (7.6.q-36build1) ...
103s Selecting previously unselected package linux-modules-6.19.0-3-generic.
103s Preparing to unpack .../73-linux-modules-6.19.0-3-generic_6.19.0-3.3_amd64.deb ...
103s Unpacking linux-modules-6.19.0-3-generic (6.19.0-3.3) ...
104s Selecting previously unselected package linux-image-6.19.0-3-generic.
104s Preparing to unpack .../74-linux-image-6.19.0-3-generic_6.19.0-3.3+1_amd64.deb ...
104s Unpacking linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
104s Preparing to unpack .../75-amd64-microcode_3.20251202.1ubuntu1_amd64.deb ...
104s Unpacking amd64-microcode (3.20251202.1ubuntu1) over (3.20250708.1ubuntu1) ...
104s Preparing to unpack .../76-linux-generic_6.19.0-3.3_amd64.deb ...
104s Unpacking linux-generic (6.19.0-3.3) over (6.18.0-9.9+1) ...
104s Preparing to unpack .../77-linux-image-generic_6.19.0-3.3_amd64.deb ...
104s Unpacking linux-image-generic (6.19.0-3.3) over (6.18.0-9.9+1) ...
104s Preparing to unpack .../78-linux-virtual_6.19.0-3.3_amd64.deb ...
104s Unpacking linux-virtual (6.19.0-3.3) over (6.18.0-9.9+1) ...
104s Preparing to unpack .../79-linux-image-virtual_6.19.0-3.3_amd64.deb ...
104s Unpacking linux-image-virtual (6.19.0-3.3) over (6.18.0-9.9+1) ...
104s Preparing to unpack .../80-linux-headers-virtual_6.19.0-3.3_amd64.deb ...
104s Unpacking linux-headers-virtual (6.19.0-3.3) over (6.18.0-9.9+1) ...
104s Selecting previously unselected package linux-headers-6.19.0-3.
104s Preparing to unpack .../81-linux-headers-6.19.0-3_6.19.0-3.3_all.deb ...
104s Unpacking linux-headers-6.19.0-3 (6.19.0-3.3) ...
106s Selecting previously unselected package linux-headers-6.19.0-3-generic.
106s Preparing to unpack .../82-linux-headers-6.19.0-3-generic_6.19.0-3.3_amd64.deb ...
106s Unpacking linux-headers-6.19.0-3-generic (6.19.0-3.3) ...
107s Preparing to unpack .../83-linux-headers-generic_6.19.0-3.3_amd64.deb ...
107s Unpacking linux-headers-generic (6.19.0-3.3) over (6.18.0-9.9+1) ...
107s Preparing to unpack .../84-linux-perf_6.19.0-3.3_amd64.deb ...
107s Unpacking linux-perf (6.19.0-3.3) over (6.18.0-9.9) ...
107s Preparing to unpack .../85-linux-tools-common_6.19.0-3.3_all.deb ...
107s Unpacking linux-tools-common (6.19.0-3.3) over (6.18.0-9.9) ...
107s Selecting previously unselected package linux-tools-6.19.0-3.
107s Preparing to unpack .../86-linux-tools-6.19.0-3_6.19.0-3.3_amd64.deb ...
107s Unpacking linux-tools-6.19.0-3 (6.19.0-3.3) ...
107s Selecting previously unselected package linux-tools-6.19.0-3-generic.
107s Preparing to unpack .../87-linux-tools-6.19.0-3-generic_6.19.0-3.3_amd64.deb ...
107s Unpacking linux-tools-6.19.0-3-generic (6.19.0-3.3) ...
107s Preparing to unpack .../88-patch_2.8-2build1_amd64.deb ...
107s Unpacking patch (2.8-2build1) over (2.8-2) ...
107s Preparing to unpack .../89-pollinate_4.33-4ubuntu5_all.deb ...
107s Unpacking pollinate (4.33-4ubuntu5) over (4.33-4ubuntu4) ...
107s Preparing to unpack .../90-python3-referencing_0.36.2-1ubuntu2_all.deb ...
107s Unpacking python3-referencing (0.36.2-1ubuntu2) over (0.36.2-1ubuntu1) ...
107s Preparing to unpack .../91-ubuntu-kernel-accessories_1.564_amd64.deb ...
107s Unpacking ubuntu-kernel-accessories (1.564) over (1.563) ...
107s Setting up libip4tc2:amd64 (1.8.11-2ubuntu3) ...
107s Setting up 3cpio (0.14.0-1ubuntu1) ...
107s Setting up libxau6:amd64 (1:1.0.11-1build2) ...
107s Setting up libnpth0t64:amd64 (1.8-3build1) ...
107s Setting up libkeyutils1:amd64 (1.6.3-6ubuntu3) ...
107s Setting up ubuntu-kernel-accessories (1.564) ...
107s Setting up libgpm2:amd64 (1.20.7-12build1) ...
107s Setting up libgdbm6t64:amd64 (1.26-1build1) ...
107s Setting up linux-modules-6.19.0-3-generic (6.19.0-3.3) ...
109s Setting up libgdbm-compat4t64:amd64 (1.26-1build1) ...
109s Setting up bpftool (7.7.0+6.19.0-3.3) ...
109s Setting up libip6tc2:amd64 (1.8.11-2ubuntu3) ...
109s Setting up liblsof0 (4.99.4+dfsg-2build2) ...
109s Setting up libmaxminddb0:amd64 (1.12.2-1build2) ...
109s Setting up libpython3.14-minimal:amd64 (3.14.2-1) ...
109s Setting up libsensors-config (1:3.6.2-2build1) ...
109s Setting up less (668-1build1) ...
109s Setting up linux-headers-6.19.0-3 (6.19.0-3.3) ...
109s Setting up libidn2-0:amd64 (2.3.8-4build1) ...
109s Setting up amd64-microcode (3.20251202.1ubuntu1) ...
109s amd64-microcode: microcode will be updated at next boot
109s Setting up man-db (2.13.1-1build1) ...
109s Updating database of manual pages ...
111s man-db.service is a disabled or a static unit not running, not starting it.
111s Setting up libjansson4:amd64 (2.14-2build4) ...
111s Setting up libglib2.0-data (2.87.2-2) ...
111s Setting up pollinate (4.33-4ubuntu5) ...
121s Setting up busybox-static (1:1.37.0-7ubuntu1) ...
121s Setting up libwrap0:amd64 (7.6.q-36build2) ...
121s Setting up linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
123s I: /boot/vmlinuz is now a symlink to vmlinuz-6.19.0-3-generic
123s I: /boot/initrd.img is now a symlink to initrd.img-6.19.0-3-generic
123s Setting up libdbus-1-3:amd64 (1.16.2-2ubuntu3) ...
123s Setting up libatomic1:amd64 (16-20260208-1ubuntu1) ...
123s Setting up patch (2.8-2build1) ...
123s Setting up libsensors5:amd64 (1:3.6.2-2build1) ...
123s Setting up busybox-initramfs (1:1.37.0-7ubuntu1) ...
123s Setting up libxtables12:amd64 (1.8.11-2ubuntu3) ...
123s Setting up lsof (4.99.4+dfsg-2build2) ...
123s Setting up libpci3:amd64 (1:3.14.0-1build2) ...
123s Setting up libdevmapper1.02.1:amd64 (2:1.02.205-2ubuntu3) ...
123s Setting up dracut-install (109-11ubuntu1) ...
123s Setting up dmsetup (2:1.02.205-2ubuntu3) ...
123s Setting up libnetfilter-conntrack3:amd64 (1.1.1-1) ...
123s Setting up pnp.ids (0.394-1build1) ...
123s Setting up dbus-session-bus-common (1.16.2-2ubuntu3) ...
123s Setting up python3-linkify-it (2.0.3-1ubuntu3) ...
123s Setting up libpcap0.8t64:amd64 (1.10.5-2ubuntu3) ...
123s Setting up libcryptsetup12:amd64 (2:2.8.0-1ubuntu3) ...
123s Setting up mawk (1.3.4.20260129-1) ...
123s Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10build2) ...
123s Setting up libusb-1.0-0:amd64 (2:1.0.29-2build1) ...
123s Setting up linux-image-virtual (6.19.0-3.3) ...
123s Setting up dbus-system-bus-common (1.16.2-2ubuntu3) ...
123s Setting up libbsd0:amd64 (0.12.2-2build2) ...
123s Setting up libdrm-common (2.4.131-1) ...
123s Setting up libstdc++6:amd64 (16-20260208-1ubuntu1) ...
123s Setting up dbus-bin (1.16.2-2ubuntu3) ...
123s Setting up libonig5:amd64 (6.9.10-1build1) ...
123s Setting up libbpf1:amd64 (1:1.6.2-1build1) ...
123s Setting up ethtool (1:6.15-3build1) ...
123s Setting up python3-referencing (0.36.2-1ubuntu2) ...
123s Setting up libxkbcommon0:amd64 (1.13.1-1) ...
123s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ...
123s Setting up linux-headers-6.19.0-3-generic (6.19.0-3.3) ...
123s Setting up tcpdump (4.99.5-2ubuntu3) ...
123s Setting up linux-image-generic (6.19.0-3.3) ...
123s Setting up wget (1.25.0-2ubuntu4) ...
123s Setting up libpython3.14-stdlib:amd64 (3.14.2-1) ...
123s Setting up iptables (1.8.11-2ubuntu3) ...
123s Setting up iproute2 (6.18.0-1ubuntu1) ...
124s Setting up linux-headers-generic (6.19.0-3.3) ...
124s Setting up dbus-daemon (1.16.2-2ubuntu3) ...
124s Setting up hwdata (0.394-1build1) ...
124s Setting up dbus-user-session (1.16.2-2ubuntu3) ...
124s Setting up libglib2.0-0t64:amd64 (2.87.2-2) ...
124s No schema files found: doing nothing.
124s Setting up dbus (1.16.2-2ubuntu3) ...
124s A reboot is required to replace the running dbus-daemon.
124s Please reboot the system when convenient.
124s Setting up shared-mime-info (2.4-5build3) ...
125s Setting up gir1.2-glib-2.0:amd64 (2.87.2-2) ...
125s Setting up pciutils (1:3.14.0-1build2) ...
125s Setting up python3-markdown-it (3.0.0-3build1) ...
125s Setting up libdrm2:amd64 (2.4.131-1) ...
125s Setting up libpython3.14:amd64 (3.14.2-1) ...
125s Setting up libapt-pkg7.0:amd64 (3.1.15) ...
125s Setting up linux-tools-common (6.19.0-3.3) ...
125s Setting up libgudev-1.0-0:amd64 (1:238-7build1) ...
125s Setting up libdrm-amdgpu1:amd64 (2.4.131-1) ...
125s Setting up apt (3.1.15) ...
125s Setting up linux-headers-virtual (6.19.0-3.3) ...
125s Setting up linux-generic (6.19.0-3.3) ...
125s Setting up libgirepository-2.0-0:amd64 (2.87.2-2) ...
125s Setting up linux-tools-6.19.0-3 (6.19.0-3.3) ...
125s Setting up ubuntu-standard (1.564) ...
125s Setting up gir1.2-girepository-3.0:amd64 (2.87.2-2) ...
125s Setting up linux-virtual (6.19.0-3.3) ...
125s Setting up linux-perf (6.19.0-3.3) ...
125s Setting up linux-tools-6.19.0-3-generic (6.19.0-3.3) ...
125s Processing triggers for debianutils (5.23.2build1) ...
125s Processing triggers for install-info (7.2-5) ...
126s Processing triggers for initramfs-tools (0.150ubuntu7) ...
126s update-initramfs: Generating /boot/initrd.img-6.18.0-9-generic
131s Processing triggers for libc-bin (2.42-2ubuntu4) ...
131s Processing triggers for linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
131s /etc/kernel/postinst.d/initramfs-tools:
131s update-initramfs: Generating /boot/initrd.img-6.19.0-3-generic
136s /etc/kernel/postinst.d/zz-update-grub:
136s Sourcing file `/etc/default/grub'
136s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
136s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg'
136s Generating grub configuration file ...
136s Found linux image: /boot/vmlinuz-6.19.0-3-generic
136s Found initrd image: /boot/initrd.img-6.19.0-3-generic
136s Found linux image: /boot/vmlinuz-6.18.0-9-generic
136s Found initrd image: /boot/initrd.img-6.18.0-9-generic
136s Warning: os-prober will not be executed to detect other bootable partitions.
136s Systems on them will not be added to the GRUB boot configuration.
136s Check GRUB_DISABLE_OS_PROBER documentation entry.
136s Adding boot menu entry for UEFI Firmware Settings ...
136s done
136s autopkgtest [01:45:33]: upgrading testbed (apt dist-upgrade and autopurge)
137s Reading package lists...
137s Building dependency tree...
137s Reading state information...
137s Calculating upgrade...
138s The following package was automatically installed and is no longer required:
138s   libpython3.13
138s Use 'sudo apt autoremove' to remove it.
138s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
138s Reading package lists...
138s Building dependency tree...
138s Reading state information...
138s Solving dependencies...
138s The following packages will be REMOVED:
138s   libpython3.13*
138s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded.
138s After this operation, 7599 kB disk space will be freed.
138s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 125273 files and directories currently installed.)
138s Removing libpython3.13:amd64 (3.13.11-1) ...
138s Processing triggers for libc-bin (2.42-2ubuntu4) ...
139s autopkgtest [01:45:36]: rebooting testbed after setup commands that affected boot
169s autopkgtest [01:46:06]: testbed running kernel: Linux 6.19.0-3-generic #3-Ubuntu SMP PREEMPT_DYNAMIC Fri Jan 23 20:01:24 UTC 2026
172s autopkgtest [01:46:09]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-gviz
173s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-gviz 1.50.0+dfsg-2 (dsc) [2483 B]
173s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-gviz 1.50.0+dfsg-2 (tar) [3826 kB]
173s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-gviz 1.50.0+dfsg-2 (diff) [7412 B]
173s gpgv: Signature made Tue Jan 14 10:31:19 2025 UTC
173s gpgv:                using RSA key 724D609337113C710550D7473C26763F6C67E6E2
173s gpgv:                issuer "crusoe@debian.org"
173s gpgv: Can't check signature: No public key
173s dpkg-source: warning: cannot verify inline signature for ./r-bioc-gviz_1.50.0+dfsg-2.dsc: no acceptable signature found
173s autopkgtest [01:46:10]: testing package r-bioc-gviz version 1.50.0+dfsg-2
174s autopkgtest [01:46:11]: build not needed
183s autopkgtest [01:46:20]: test pkg-r-autopkgtest: preparing testbed
183s Reading package lists...
183s Building dependency tree...
183s Reading state information...
183s Solving dependencies...
183s The following NEW packages will be installed:
183s   build-essential cpp cpp-15 cpp-15-x86-64-linux-gnu cpp-x86-64-linux-gnu
183s   dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
183s   fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax
183s   g++ g++-15 g++-15-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-15
183s   gcc-15-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-15
183s   gfortran-15-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools
183s   javascript-common libasan8 libbibtex-parser-perl libblas-dev libblas3
183s   libboost-dev libboost1.90-dev libbz2-dev libc-dev-bin libc6-dev libcairo2
183s   libcc1-0 libcrypt-dev libdatrie1 libdeflate-dev libdeflate0 libfontconfig1
183s   libgcc-15-dev libgfortran-15-dev libgfortran5 libgomp1 libgraphite2-3
183s   libharfbuzz0b libhwasan0 libice6 libicu-dev libio-string-perl libisl23
183s   libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8
183s   libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim
183s   libjs-highlight.js libjs-jquery libjs-jquery-datatables
183s   libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr
183s   libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js
183s   libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker
183s   libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4
183s   liblsan0 liblua5.4-0 liblzma-dev libmpc3 libmpfi0 libncurses-dev
183s   libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
183s   libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
183s   libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libptexenc1 libquadmath0
183s   libreadline-dev libsharpyuv0 libsm6 libstdc++-15-dev libsynctex2 libtcl8.6
183s   libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev
183s   libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0
183s   libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6t64 libzstd-dev
183s   libzzip-0-13t64 linux-libc-dev node-bootstrap-sass node-html5shiv
183s   node-normalize.css pandoc pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin
183s   r-base-core r-base-dev r-bioc-annotationdbi r-bioc-annotationfilter
183s   r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio
183s   r-bioc-biocparallel r-bioc-biocstyle r-bioc-biocversion r-bioc-biomart
183s   r-bioc-biostrings r-bioc-biovizbase r-bioc-bsgenome r-bioc-delayedarray
183s   r-bioc-ensembldb r-bioc-genomeinfodb r-bioc-genomeinfodbdata
183s   r-bioc-genomicalignments r-bioc-genomicfeatures r-bioc-genomicranges
183s   r-bioc-gviz r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics
183s   r-bioc-protgenerics r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer
183s   r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray
183s   r-bioc-summarizedexperiment r-bioc-ucsc.utils r-bioc-variantannotation
183s   r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-acepack r-cran-askpass
183s   r-cran-backports r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit
183s   r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-brio
183s   r-cran-bslib r-cran-cachem r-cran-callr r-cran-checkmate r-cran-chron
183s   r-cran-cli r-cran-cluster r-cran-codetools r-cran-colorspace
183s   r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-data.table
183s   r-cran-dbi r-cran-dbplyr r-cran-deldir r-cran-desc r-cran-dichromat
183s   r-cran-diffobj r-cran-digest r-cran-dplyr r-cran-evaluate r-cran-fansi
183s   r-cran-farver r-cran-fastmap r-cran-filelock r-cran-fontawesome
183s   r-cran-foreign r-cran-formatr r-cran-formula r-cran-fs r-cran-futile.logger
183s   r-cran-futile.options r-cran-generics r-cran-ggplot2 r-cran-glue
183s   r-cran-gridextra r-cran-gtable r-cran-highr r-cran-hmisc r-cran-hms
183s   r-cran-htmltable r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv
183s   r-cran-httr r-cran-httr2 r-cran-interp r-cran-isoband r-cran-jpeg
183s   r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling
183s   r-cran-lambda.r r-cran-later r-cran-lattice r-cran-latticeextra
183s   r-cran-lazyeval r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass
183s   r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-mime
183s   r-cran-nlme r-cran-nnet r-cran-openssl r-cran-pillar r-cran-pkgbuild
183s   r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-png
183s   r-cran-praise r-cran-prettyunits r-cran-processx r-cran-progress
183s   r-cran-promises r-cran-ps r-cran-purrr r-cran-r6 r-cran-rappdirs
183s   r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppeigen r-cran-rcurl
183s   r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rpart
183s   r-cran-rprojroot r-cran-rsqlite r-cran-rstudioapi r-cran-sass r-cran-scales
183s   r-cran-shiny r-cran-snow r-cran-sourcetools r-cran-stringi r-cran-stringr
183s   r-cran-survival r-cran-sys r-cran-testthat r-cran-tibble r-cran-tidyr
183s   r-cran-tidyselect r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-viridis
183s   r-cran-viridislite r-cran-waldo r-cran-withr r-cran-xfun r-cran-xml
183s   r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto t1utils tex-common
183s   texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base unzip
183s   x11-common xdg-utils zip zlib1g-dev
184s 0 upgraded, 331 newly installed, 0 to remove and 0 not upgraded.
184s Need to get 509 MB of archives.
184s After this operation, 1490 MB of additional disk space will be used.
184s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 libc-dev-bin amd64 2.42-2ubuntu4 [23.3 kB]
184s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-libc-dev amd64 6.19.0-3.3 [1846 kB]
186s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libcrypt-dev amd64 1:4.5.1-1 [122 kB]
186s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 rpcsvc-proto amd64 1.4.3-1build1 [68.3 kB]
186s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 libc6-dev amd64 2.42-2ubuntu4 [2207 kB]
188s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libisl23 amd64 0.27-1build1 [691 kB]
189s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 libmpc3 amd64 1.3.1-2 [54.8 kB]
189s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [12.9 MB]
200s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15 amd64 15.2.0-12ubuntu1 [1034 B]
200s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [5746 B]
200s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp amd64 4:15.2.0-4ubuntu1 [22.4 kB]
200s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libcc1-0 amd64 16-20260208-1ubuntu1 [51.2 kB]
200s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 16-20260208-1ubuntu1 [162 kB]
200s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 libitm1 amd64 16-20260208-1ubuntu1 [30.2 kB]
200s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libasan8 amd64 16-20260208-1ubuntu1 [3182 kB]
202s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsan0 amd64 16-20260208-1ubuntu1 [1392 kB]
203s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 libtsan2 amd64 16-20260208-1ubuntu1 [2838 kB]
205s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 libubsan1 amd64 16-20260208-1ubuntu1 [1238 kB]
207s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 libhwasan0 amd64 16-20260208-1ubuntu1 [1729 kB]
208s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libquadmath0 amd64 16-20260208-1ubuntu1 [155 kB]
208s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-15-dev amd64 15.2.0-12ubuntu1 [2866 kB]
210s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [25.4 MB]
227s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15 amd64 15.2.0-12ubuntu1 [530 kB]
227s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1208 B]
227s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc amd64 4:15.2.0-4ubuntu1 [5024 B]
227s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++-15-dev amd64 15.2.0-12ubuntu1 [2553 kB]
228s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [14.4 MB]
234s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15 amd64 15.2.0-12ubuntu1 [25.3 kB]
234s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [966 B]
234s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 g++ amd64 4:15.2.0-4ubuntu1 [1100 B]
234s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 build-essential amd64 12.12ubuntu2 [5256 B]
234s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 dctrl-tools amd64 2.24-3build4 [104 kB]
234s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-mono all 2.37-8build1 [502 kB]
234s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-core all 2.37-8build1 [834 kB]
235s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig-config amd64 2.17.1-3ubuntu1 [38.5 kB]
235s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 libfontconfig1 amd64 2.17.1-3ubuntu1 [144 kB]
235s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig amd64 2.17.1-3ubuntu1 [180 kB]
235s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB]
235s Get:39 http://ftpmaster.internal/ubuntu resolute/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB]
235s Get:40 http://ftpmaster.internal/ubuntu resolute/universe amd64 fonts-lmodern all 2.005-1build1 [4788 kB]
236s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB]
237s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 16-20260208-1ubuntu1 [957 kB]
237s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran-15-dev amd64 15.2.0-12ubuntu1 [973 kB]
238s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [13.6 MB]
241s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15 amd64 15.2.0-12ubuntu1 [18.1 kB]
241s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1014 B]
241s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran amd64 4:15.2.0-4ubuntu1 [1172 B]
241s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 icu-devtools amd64 78.2-1ubuntu1 [214 kB]
241s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 javascript-common all 12+nmu1build1 [4864 B]
241s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 libio-string-perl all 1.08-4 [11.1 kB]
241s Get:51 http://ftpmaster.internal/ubuntu resolute/universe amd64 liblatex-tounicode-perl all 1.93-1 [29.2 kB]
241s Get:52 http://ftpmaster.internal/ubuntu resolute/universe amd64 libbibtex-parser-perl all 1.93+dfsg-1 [17.4 kB]
241s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7ubuntu1 [260 kB]
241s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas-dev amd64 3.12.1-7ubuntu1 [235 kB]
241s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost1.90-dev amd64 1.90.0-2ubuntu1 [11.5 MB]
243s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-dev amd64 1.90.0.0ubuntu3 [4764 B]
243s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libbz2-dev amd64 1.0.8-6build2 [36.2 kB]
243s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libpixman-1-0 amd64 0.46.4-1 [287 kB]
243s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-render0 amd64 1.17.0-2ubuntu1 [16.2 kB]
243s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-shm0 amd64 1.17.0-2ubuntu1 [5808 B]
243s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 libxrender1 amd64 1:0.9.12-1 [19.8 kB]
243s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 libcairo2 amd64 1.18.4-3 [579 kB]
244s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 libdatrie1 amd64 0.2.14-1 [19.8 kB]
244s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate0 amd64 1.23-2build1 [51.6 kB]
244s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate-dev amd64 1.23-2build1 [58.8 kB]
244s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 libgraphite2-3 amd64 1.3.14-11ubuntu1 [73.7 kB]
244s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 libharfbuzz0b amd64 12.3.2-1 [519 kB]
244s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 x11-common all 1:7.7+24ubuntu1 [22.4 kB]
244s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 libice6 amd64 2:1.1.1-1build1 [44.0 kB]
244s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 libicu-dev amd64 78.2-1ubuntu1 [12.5 MB]
246s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8 amd64 2.1.5-4ubuntu3 [156 kB]
247s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8-dev amd64 2.1.5-4ubuntu3 [300 kB]
247s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8 amd64 8c-2ubuntu12 [2142 B]
247s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8-dev amd64 8c-2ubuntu12 [1480 B]
247s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-dev amd64 8c-2ubuntu12 [1480 B]
247s Get:76 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB]
247s Get:77 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB]
247s Get:78 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB]
247s Get:79 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-d3 all 3.5.17-4build1 [136 kB]
247s Get:80 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB]
247s Get:81 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB]
247s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB]
247s Get:83 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB]
247s Get:84 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
247s Get:85 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B]
247s Get:86 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
247s Get:87 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB]
247s Get:88 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB]
247s Get:89 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB]
247s Get:90 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-prettify all 2015.12.04+dfsg-3 [41.4 kB]
247s Get:91 http://ftpmaster.internal/ubuntu resolute/universe amd64 libkpathsea6 amd64 2025.20250727.75242+ds-5build1 [66.0 kB]
247s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7ubuntu1 [2739 kB]
248s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack-dev amd64 3.12.1-7ubuntu1 [5433 kB]
249s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu2 [207 kB]
249s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 liblua5.4-0 amd64 5.4.8-1 [174 kB]
249s Get:96 http://ftpmaster.internal/ubuntu resolute/universe amd64 libmpfi0 amd64 1.5.4+ds-4build1 [36.6 kB]
249s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 libncurses-dev amd64 6.6+20251231-1 [389 kB]
249s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai-data all 0.1.30-1 [155 kB]
250s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai0 amd64 0.1.30-1 [19.2 kB]
250s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 libpango-1.0-0 amd64 1.57.0-1 [241 kB]
250s Get:101 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangoft2-1.0-0 amd64 1.57.0-1 [53.3 kB]
250s Get:102 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangocairo-1.0-0 amd64 1.57.0-1 [29.0 kB]
250s Get:103 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper2 amd64 2.2.5-0.3build1 [17.3 kB]
250s Get:104 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper-utils amd64 2.2.5-0.3build1 [15.6 kB]
250s Get:105 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-16-0 amd64 10.46-1 [243 kB]
250s Get:106 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-32-0 amd64 10.46-1 [230 kB]
250s Get:107 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-posix3 amd64 10.46-1 [7354 B]
250s Get:108 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-dev amd64 10.46-1 [832 kB]
250s Get:109 http://ftpmaster.internal/ubuntu resolute/main amd64 libpkgconf3 amd64 1.8.1-4build1 [32.8 kB]
250s Get:110 http://ftpmaster.internal/ubuntu resolute/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu2 [898 kB]
250s Get:111 http://ftpmaster.internal/ubuntu resolute/main amd64 libpng-dev amd64 1.6.54-1 [273 kB]
250s Get:112 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpotrace0 amd64 1.16-2build2 [17.9 kB]
250s Get:113 http://ftpmaster.internal/ubuntu resolute/universe amd64 libptexenc1 amd64 2025.20250727.75242+ds-5build1 [46.4 kB]
250s Get:114 http://ftpmaster.internal/ubuntu resolute/main amd64 libreadline-dev amd64 8.3-3 [189 kB]
250s Get:115 http://ftpmaster.internal/ubuntu resolute/main amd64 libsharpyuv0 amd64 1.5.0-0.1build1 [17.6 kB]
250s Get:116 http://ftpmaster.internal/ubuntu resolute/main amd64 libsm6 amd64 2:1.2.6-1build1 [16.9 kB]
250s Get:117 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsynctex2 amd64 2025.20250727.75242+ds-5build1 [62.1 kB]
250s Get:118 http://ftpmaster.internal/ubuntu resolute/main amd64 libtcl8.6 amd64 8.6.17+dfsg-1build1 [1003 kB]
251s Get:119 http://ftpmaster.internal/ubuntu resolute/universe amd64 libteckit0 amd64 2.5.13+ds-1 [431 kB]
251s Get:120 http://ftpmaster.internal/ubuntu resolute/universe amd64 libtexlua53-5 amd64 2025.20250727.75242+ds-5build1 [125 kB]
251s Get:121 http://ftpmaster.internal/ubuntu resolute/main amd64 libjbig0 amd64 2.1-6.1ubuntu3 [30.0 kB]
251s Get:122 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebp7 amd64 1.5.0-0.1build1 [264 kB]
251s Get:123 http://ftpmaster.internal/ubuntu resolute/main amd64 libtiff6 amd64 4.7.0-3ubuntu3 [209 kB]
251s Get:124 http://ftpmaster.internal/ubuntu resolute/main amd64 libxft2 amd64 2.3.6-1build2 [45.1 kB]
251s Get:125 http://ftpmaster.internal/ubuntu resolute/main amd64 libxss1 amd64 1:1.2.3-1build4 [7084 B]
251s Get:126 http://ftpmaster.internal/ubuntu resolute/main amd64 libtk8.6 amd64 8.6.17-1 [823 kB]
251s Get:127 http://ftpmaster.internal/ubuntu resolute/main amd64 libxt6t64 amd64 1:1.2.1-1.3 [173 kB]
251s Get:128 http://ftpmaster.internal/ubuntu resolute/main amd64 libxmu6 amd64 2:1.1.3-4 [48.9 kB]
251s Get:129 http://ftpmaster.internal/ubuntu resolute/main amd64 libxpm4 amd64 1:3.5.17-1build3 [37.3 kB]
251s Get:130 http://ftpmaster.internal/ubuntu resolute/main amd64 libxaw7 amd64 2:1.0.16-1build1 [190 kB]
251s Get:131 http://ftpmaster.internal/ubuntu resolute/main amd64 libxi6 amd64 2:1.8.2-2 [33.1 kB]
251s Get:132 http://ftpmaster.internal/ubuntu resolute/main amd64 libzstd-dev amd64 1.5.7+dfsg-3 [376 kB]
251s Get:133 http://ftpmaster.internal/ubuntu resolute/universe amd64 libzzip-0-13t64 amd64 0.13.78+dfsg.1-0.2 [30.1 kB]
251s Get:134 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB]
251s Get:135 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
251s Get:136 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-normalize.css all 8.0.1-5.1 [10.4 kB]
251s Get:137 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB]
252s Get:138 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc amd64 3.1.11.1+ds-4 [27.2 MB]
260s Get:139 http://ftpmaster.internal/ubuntu resolute/main amd64 zip amd64 3.0-15ubuntu3 [175 kB]
260s Get:140 http://ftpmaster.internal/ubuntu resolute/main amd64 unzip amd64 6.0-29ubuntu1 [180 kB]
260s Get:141 http://ftpmaster.internal/ubuntu resolute/main amd64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB]
260s Get:142 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-core amd64 4.5.2-1ubuntu2 [28.8 MB]
271s Get:143 http://ftpmaster.internal/ubuntu resolute/main amd64 liblzma-dev amd64 5.8.2-2 [179 kB]
271s Get:144 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf-bin amd64 1.8.1-4build1 [21.7 kB]
271s Get:145 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf amd64 1.8.1-4build1 [16.8 kB]
271s Get:146 http://ftpmaster.internal/ubuntu resolute/main amd64 libtirpc-dev amd64 1.3.6+ds-1 [195 kB]
271s Get:147 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-dev all 4.5.2-1ubuntu2 [1880 B]
271s Get:148 http://ftpmaster.internal/ubuntu resolute/universe amd64 pkg-r-autopkgtest all 20250812 [6158 B]
271s Get:149 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB]
271s Get:150 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biobase amd64 2.66.0-2 [2332 kB]
272s Get:151 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB]
273s Get:152 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-iranges amd64 2.40.1-3 [2309 kB]
273s Get:153 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dbi all 1.2.3-1build1 [855 kB]
274s Get:154 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bit amd64 4.6.0+dfsg-1 [466 kB]
274s Get:155 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bit64 amd64 4.6.0-1-4 [491 kB]
274s Get:156 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rlang amd64 1.1.5-3 [1721 kB]
275s Get:157 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB]
275s Get:158 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB]
275s Get:159 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB]
275s Get:160 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB]
275s Get:161 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-blob all 1.3.0-1 [54.1 kB]
275s Get:162 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB]
275s Get:163 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB]
275s Get:164 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-memoise all 2.0.1-1build1 [54.5 kB]
275s Get:165 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB]
275s Get:166 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plogr all 0.2.0-3build2 [15.8 kB]
275s Get:167 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cpp11 all 0.5.3-1 [242 kB]
276s Get:168 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rsqlite amd64 2.3.9-1 [1467 kB]
276s Get:169 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-curl amd64 7.0.0+dfsg-1 [202 kB]
276s Get:170 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB]
276s Get:171 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB]
276s Get:172 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB]
276s Get:173 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB]
276s Get:174 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-openssl amd64 2.3.2+dfsg-1 [407 kB]
276s Get:175 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB]
276s Get:176 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB]
276s Get:177 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-png amd64 0.1-8-1build2 [40.6 kB]
276s Get:178 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB]
276s Get:179 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB]
277s Get:180 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB]
277s Get:181 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB]
279s Get:182 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB]
280s Get:183 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB]
280s Get:184 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.3 MB]
283s Get:185 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-keggrest all 1.46.0+dfsg-3 [183 kB]
283s Get:186 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-annotationdbi all 1.68.0-2 [4857 kB]
284s Get:187 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomicranges amd64 1.58.0+dfsg-2 [2083 kB]
284s Get:188 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lazyeval amd64 0.2.2-1build2 [146 kB]
284s Get:189 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-annotationfilter all 1.30.0+dfsg-2 [247 kB]
284s Get:190 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-generics all 0.1.4-1 [84.0 kB]
284s Get:191 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB]
284s Get:192 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB]
284s Get:193 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB]
284s Get:194 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fansi amd64 1.0.6-2 [626 kB]
285s Get:195 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB]
285s Get:196 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
285s Get:197 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB]
285s Get:198 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB]
285s Get:199 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-purrr amd64 1.0.4-1 [552 kB]
285s Get:200 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringi amd64 1.8.4-1build2 [908 kB]
286s Get:201 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB]
286s Get:202 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB]
286s Get:203 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dbplyr all 2.5.1+dfsg-1 [1237 kB]
286s Get:204 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-filelock amd64 1.0.3-1 [29.6 kB]
286s Get:205 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocfilecache all 2.14.0+dfsg-2 [300 kB]
286s Get:206 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB]
286s Get:207 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-formatr all 1.14-2 [152 kB]
286s Get:208 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lambda.r all 1.2.4-2build2 [118 kB]
286s Get:209 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-futile.options all 1.0.1-3build2 [20.5 kB]
286s Get:210 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-futile.logger all 1.4.3-4build2 [98.4 kB]
286s Get:211 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-snow all 1:0.4.4-2build1 [98.7 kB]
286s Get:212 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-codetools all 0.2-20-1build1 [91.1 kB]
286s Get:213 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bh all 1.84.0-1 [5962 B]
286s Get:214 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocparallel amd64 1.40.0-2 [1337 kB]
286s Get:215 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-base64enc amd64 0.1-3-3build1 [28.5 kB]
286s Get:216 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-digest amd64 0.6.39-1 [203 kB]
286s Get:217 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB]
286s Get:218 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-evaluate all 1.0.5-1 [117 kB]
287s Get:219 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xfun amd64 0.55+dfsg-1 [587 kB]
287s Get:220 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB]
287s Get:221 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB]
287s Get:222 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB]
288s Get:223 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-knitr all 1.51+dfsg-1 [847 kB]
288s Get:224 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB]
288s Get:225 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB]
288s Get:226 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rappdirs amd64 0.3.3-1build1 [49.3 kB]
288s Get:227 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB]
288s Get:228 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB]
289s Get:229 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB]
289s Get:230 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tinytex all 0.58-1 [148 kB]
289s Get:231 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-modernizr all 3.13.0-0.1build1 [100 kB]
289s Get:232 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-littler amd64 0.3.22-1 [85.5 kB]
289s Get:233 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
289s Get:234 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpp amd64 1.1.0-1 [2021 kB]
289s Get:235 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB]
289s Get:236 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB]
289s Get:237 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB]
289s Get:238 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xtable all 1:1.8-4-2build1 [691 kB]
289s Get:239 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB]
289s Get:240 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-commonmark amd64 1.9.5-1 [138 kB]
289s Get:241 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
289s Get:242 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB]
290s Get:243 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rmarkdown all 2.30+dfsg-1 [1501 kB]
290s Get:244 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bookdown all 0.42+dfsg-1 [1409 kB]
290s Get:245 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB]
290s Get:246 http://ftpmaster.internal/ubuntu resolute/universe amd64 tex-common all 6.20 [30.0 kB]
290s Get:247 http://ftpmaster.internal/ubuntu resolute/main amd64 t1utils amd64 1.41-4build4 [62.7 kB]
290s Get:248 http://ftpmaster.internal/ubuntu resolute/universe amd64 texlive-binaries amd64 2025.20250727.75242+ds-5build1 [8747 kB]
292s Get:249 http://ftpmaster.internal/ubuntu resolute/universe amd64 texlive-base all 2025.20260124-1 [22.8 MB]
295s Get:250 http://ftpmaster.internal/ubuntu resolute/universe amd64 texlive-latex-base all 2025.20260124-1 [1321 kB]
295s Get:251 http://ftpmaster.internal/ubuntu resolute/universe amd64 texlive-bibtex-extra all 2025.20260124-1 [80.6 MB]
303s Get:252 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocversion all 3.20.0-2 [11.1 kB]
303s Get:253 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocstyle all 2.34.0+dfsg-1 [451 kB]
303s Get:254 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-hms all 1.1.4-1 [102 kB]
303s Get:255 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-prettyunits all 1.2.0-1 [162 kB]
303s Get:256 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-progress all 1.2.3-1 [91.9 kB]
303s Get:257 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httr2 all 1.1.1-2 [752 kB]
303s Get:258 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xml2 amd64 1.4.1-1 [329 kB]
303s Get:259 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biomart all 2.62.1+dfsg-1 [444 kB]
303s Get:260 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB]
303s Get:261 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB]
303s Get:262 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB]
303s Get:263 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridislite all 0.4.3-1 [1088 kB]
303s Get:264 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-scales all 1.4.0-1 [725 kB]
303s Get:265 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB]
303s Get:266 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB]
303s Get:267 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mass amd64 7.3-65-1 [1116 kB]
303s Get:268 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 r-cran-lattice amd64 0.22-9-1 [1399 kB]
303s Get:269 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nlme amd64 3.1.168-1 [2320 kB]
304s Get:270 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrix amd64 1.7-4-1 [4220 kB]
304s Get:271 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mgcv amd64 1.9-4-1 [3556 kB]
304s Get:272 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB]
304s Get:273 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cluster amd64 2.1.8.2-1 [570 kB]
304s Get:274 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-survival amd64 3.8-6-1 [8274 kB]
304s Get:275 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rpart amd64 4.1.24-1build1 [666 kB]
304s Get:276 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nnet amd64 7.3-20-1 [116 kB]
304s Get:277 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-foreign amd64 0.8.91-1 [245 kB]
305s Get:278 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gridextra all 2.3-3build2 [1032 kB]
305s Get:279 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-data.table amd64 1.17.0+dfsg-1 [2168 kB]
305s Get:280 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-backports amd64 1.5.0-2 [121 kB]
305s Get:281 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-checkmate amd64 2.3.2-1 [706 kB]
305s Get:282 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB]
305s Get:283 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rstudioapi all 0.18.0-1 [326 kB]
305s Get:284 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmltable all 2.4.3-1 [388 kB]
305s Get:285 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB]
305s Get:286 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-formula all 1.2-5-1 [158 kB]
305s Get:287 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-chron amd64 2.3-62-1 [189 kB]
305s Get:288 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jpeg amd64 0.1-10-1 [31.4 kB]
305s Get:289 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-deldir amd64 2.0-4-1build1 [270 kB]
305s Get:290 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB]
305s Get:291 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-interp amd64 1.1-6-1 [1454 kB]
305s Get:292 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-latticeextra all 0.6-31-1 [2177 kB]
305s Get:293 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-acepack amd64 1.6.3-1 [86.2 kB]
305s Get:294 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridis all 0.6.5-1 [2770 kB]
305s Get:295 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-hmisc amd64 5.2-5-2 [3608 kB]
306s Get:296 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dichromat all 1:2.0-0.1-1 [148 kB]
306s Get:297 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrixstats amd64 1.5.0-1 [542 kB]
306s Get:298 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB]
306s Get:299 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-abind all 1.4-8-1build1 [67.0 kB]
306s Get:300 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-s4arrays amd64 1.6.0+dfsg-2 [698 kB]
306s Get:301 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-sparsearray amd64 1.6.2+dfsg-2 [1391 kB]
306s Get:302 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-delayedarray amd64 0.32.0+dfsg-2 [2064 kB]
306s Get:303 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB]
306s Get:304 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bitops amd64 1.0-9-1 [30.3 kB]
306s Get:305 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rhtslib amd64 3.2.0+dfsg-2 [1499 kB]
306s Get:306 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rsamtools amd64 2.22.0+dfsg-2 [3745 kB]
307s Get:307 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomicalignments amd64 1.42.0-2 [2165 kB]
307s Get:308 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xml amd64 3.99-0.20-1 [1751 kB]
307s Get:309 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [807 kB]
307s Get:310 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rjson amd64 0.2.23-1 [104 kB]
307s Get:311 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-restfulr amd64 0.0.15-1 [380 kB]
307s Get:312 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rtracklayer amd64 1.66.0-3 [5225 kB]
307s Get:313 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomicfeatures all 1.58.0+dfsg-2 [937 kB]
308s Get:314 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-bsgenome all 1.74.0-2 [7001 kB]
308s Get:315 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-variantannotation amd64 1.52.0-2 [3642 kB]
308s Get:316 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-protgenerics all 1.38.0-2 [239 kB]
308s Get:317 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-ensembldb all 2.30.0+dfsg-3 [1520 kB]
308s Get:318 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biovizbase amd64 1.54.0-2 [2857 kB]
308s Get:319 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-gviz all 1.50.0+dfsg-2 [4881 kB]
308s Get:320 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB]
308s Get:321 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ps amd64 1.9.0-1 [408 kB]
308s Get:322 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-processx amd64 3.8.6-1 [365 kB]
309s Get:323 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-callr all 3.7.6-1 [458 kB]
309s Get:324 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-desc all 1.4.3-1 [359 kB]
309s Get:325 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-diffobj amd64 0.3.5-1build1 [1156 kB]
309s Get:326 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgbuild all 1.4.8-1 [219 kB]
309s Get:327 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rprojroot all 2.1.1-1 [131 kB]
309s Get:328 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgload all 1.4.1-1 [252 kB]
309s Get:329 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-praise all 1.0.0-4build2 [20.9 kB]
309s Get:330 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-waldo all 0.6.2-1 [153 kB]
309s Get:331 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-testthat amd64 3.2.3-1 [1651 kB]
309s Preconfiguring packages ...
309s Fetched 509 MB in 2min 5s (4061 kB/s)
309s Selecting previously unselected package libc-dev-bin.
309s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 125269 files and directories currently installed.)
309s Preparing to unpack .../000-libc-dev-bin_2.42-2ubuntu4_amd64.deb ...
309s Unpacking libc-dev-bin (2.42-2ubuntu4) ...
309s Selecting previously unselected package linux-libc-dev:amd64.
309s Preparing to unpack .../001-linux-libc-dev_6.19.0-3.3_amd64.deb ...
309s Unpacking linux-libc-dev:amd64 (6.19.0-3.3) ...
310s Selecting previously unselected package libcrypt-dev:amd64.
310s Preparing to unpack .../002-libcrypt-dev_1%3a4.5.1-1_amd64.deb ...
310s Unpacking libcrypt-dev:amd64 (1:4.5.1-1) ...
310s Selecting previously unselected package rpcsvc-proto.
310s Preparing to unpack .../003-rpcsvc-proto_1.4.3-1build1_amd64.deb ...
310s Unpacking rpcsvc-proto (1.4.3-1build1) ...
310s Selecting previously unselected package libc6-dev:amd64.
310s Preparing to unpack .../004-libc6-dev_2.42-2ubuntu4_amd64.deb ...
310s Unpacking libc6-dev:amd64 (2.42-2ubuntu4) ...
310s Selecting previously unselected package libisl23:amd64.
310s Preparing to unpack .../005-libisl23_0.27-1build1_amd64.deb ...
310s Unpacking libisl23:amd64 (0.27-1build1) ...
310s Selecting previously unselected package libmpc3:amd64.
310s Preparing to unpack .../006-libmpc3_1.3.1-2_amd64.deb ...
310s Unpacking libmpc3:amd64 (1.3.1-2) ...
310s Selecting previously unselected package cpp-15-x86-64-linux-gnu.
310s Preparing to unpack .../007-cpp-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ...
310s Unpacking cpp-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
310s Selecting previously unselected package cpp-15.
310s Preparing to unpack .../008-cpp-15_15.2.0-12ubuntu1_amd64.deb ...
310s Unpacking cpp-15 (15.2.0-12ubuntu1) ...
310s Selecting previously unselected package cpp-x86-64-linux-gnu.
310s Preparing to unpack .../009-cpp-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ...
310s Unpacking cpp-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
310s Selecting previously unselected package cpp.
310s Preparing to unpack .../010-cpp_4%3a15.2.0-4ubuntu1_amd64.deb ...
310s Unpacking cpp (4:15.2.0-4ubuntu1) ...
310s Selecting previously unselected package libcc1-0:amd64.
310s Preparing to unpack .../011-libcc1-0_16-20260208-1ubuntu1_amd64.deb ...
310s Unpacking libcc1-0:amd64 (16-20260208-1ubuntu1) ...
310s Selecting previously unselected package libgomp1:amd64.
310s Preparing to unpack .../012-libgomp1_16-20260208-1ubuntu1_amd64.deb ...
310s Unpacking libgomp1:amd64 (16-20260208-1ubuntu1) ...
310s Selecting previously unselected package libitm1:amd64.
310s Preparing to unpack .../013-libitm1_16-20260208-1ubuntu1_amd64.deb ...
310s Unpacking libitm1:amd64 (16-20260208-1ubuntu1) ...
310s Selecting previously unselected package libasan8:amd64.
310s Preparing to unpack .../014-libasan8_16-20260208-1ubuntu1_amd64.deb ...
310s Unpacking libasan8:amd64 (16-20260208-1ubuntu1) ...
310s Selecting previously unselected package liblsan0:amd64.
310s Preparing to unpack .../015-liblsan0_16-20260208-1ubuntu1_amd64.deb ...
310s Unpacking liblsan0:amd64 (16-20260208-1ubuntu1) ...
310s Selecting previously unselected package libtsan2:amd64.
310s Preparing to unpack .../016-libtsan2_16-20260208-1ubuntu1_amd64.deb ...
310s Unpacking libtsan2:amd64 (16-20260208-1ubuntu1) ...
310s Selecting previously unselected package libubsan1:amd64.
310s Preparing to unpack .../017-libubsan1_16-20260208-1ubuntu1_amd64.deb ...
310s Unpacking libubsan1:amd64 (16-20260208-1ubuntu1) ...
310s Selecting previously unselected package libhwasan0:amd64.
310s Preparing to unpack .../018-libhwasan0_16-20260208-1ubuntu1_amd64.deb ...
310s Unpacking libhwasan0:amd64 (16-20260208-1ubuntu1) ...
310s Selecting previously unselected package libquadmath0:amd64.
310s Preparing to unpack .../019-libquadmath0_16-20260208-1ubuntu1_amd64.deb ...
310s Unpacking libquadmath0:amd64 (16-20260208-1ubuntu1) ...
310s Selecting previously unselected package libgcc-15-dev:amd64.
310s Preparing to unpack .../020-libgcc-15-dev_15.2.0-12ubuntu1_amd64.deb ...
310s Unpacking libgcc-15-dev:amd64 (15.2.0-12ubuntu1) ...
310s Selecting previously unselected package gcc-15-x86-64-linux-gnu.
310s Preparing to unpack .../021-gcc-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ...
310s Unpacking gcc-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
311s Selecting previously unselected package gcc-15.
311s Preparing to unpack .../022-gcc-15_15.2.0-12ubuntu1_amd64.deb ...
311s Unpacking gcc-15 (15.2.0-12ubuntu1) ...
311s Selecting previously unselected package gcc-x86-64-linux-gnu.
311s Preparing to unpack .../023-gcc-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ...
311s Unpacking gcc-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
311s Selecting previously unselected package gcc.
311s Preparing to unpack .../024-gcc_4%3a15.2.0-4ubuntu1_amd64.deb ...
311s Unpacking gcc (4:15.2.0-4ubuntu1) ...
311s Selecting previously unselected package libstdc++-15-dev:amd64.
311s Preparing to unpack .../025-libstdc++-15-dev_15.2.0-12ubuntu1_amd64.deb ...
311s Unpacking libstdc++-15-dev:amd64 (15.2.0-12ubuntu1) ...
311s Selecting previously unselected package g++-15-x86-64-linux-gnu.
311s Preparing to unpack .../026-g++-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ...
311s Unpacking g++-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
311s Selecting previously unselected package g++-15.
311s Preparing to unpack .../027-g++-15_15.2.0-12ubuntu1_amd64.deb ...
311s Unpacking g++-15 (15.2.0-12ubuntu1) ...
311s Selecting previously unselected package g++-x86-64-linux-gnu.
311s Preparing to unpack .../028-g++-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ...
311s Unpacking g++-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
311s Selecting previously unselected package g++.
311s Preparing to unpack .../029-g++_4%3a15.2.0-4ubuntu1_amd64.deb ...
311s Unpacking g++ (4:15.2.0-4ubuntu1) ...
311s Selecting previously unselected package build-essential.
311s Preparing to unpack .../030-build-essential_12.12ubuntu2_amd64.deb ...
311s Unpacking build-essential (12.12ubuntu2) ...
311s Selecting previously unselected package dctrl-tools.
311s Preparing to unpack .../031-dctrl-tools_2.24-3build4_amd64.deb ...
311s Unpacking dctrl-tools (2.24-3build4) ...
311s Selecting previously unselected package fonts-dejavu-mono.
311s Preparing to unpack .../032-fonts-dejavu-mono_2.37-8build1_all.deb ...
311s Unpacking fonts-dejavu-mono (2.37-8build1) ...
311s Selecting previously unselected package fonts-dejavu-core.
311s Preparing to unpack .../033-fonts-dejavu-core_2.37-8build1_all.deb ...
311s Unpacking fonts-dejavu-core (2.37-8build1) ...
311s Selecting previously unselected package fontconfig-config.
311s Preparing to unpack .../034-fontconfig-config_2.17.1-3ubuntu1_amd64.deb ...
311s Unpacking fontconfig-config (2.17.1-3ubuntu1) ...
311s Selecting previously unselected package libfontconfig1:amd64.
311s Preparing to unpack .../035-libfontconfig1_2.17.1-3ubuntu1_amd64.deb ...
311s Unpacking libfontconfig1:amd64 (2.17.1-3ubuntu1) ...
311s Selecting previously unselected package fontconfig.
311s Preparing to unpack .../036-fontconfig_2.17.1-3ubuntu1_amd64.deb ...
311s Unpacking fontconfig (2.17.1-3ubuntu1) ...
311s Selecting previously unselected package fonts-font-awesome.
311s Preparing to unpack .../037-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1build1_all.deb ...
311s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ...
311s Selecting previously unselected package fonts-glyphicons-halflings.
311s Preparing to unpack .../038-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-6_all.deb ...
311s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ...
311s Selecting previously unselected package fonts-lmodern.
311s Preparing to unpack .../039-fonts-lmodern_2.005-1build1_all.deb ...
311s Unpacking fonts-lmodern (2.005-1build1) ...
311s Selecting previously unselected package fonts-mathjax.
311s Preparing to unpack .../040-fonts-mathjax_2.7.9+dfsg-1build1_all.deb ...
311s Unpacking fonts-mathjax (2.7.9+dfsg-1build1) ...
311s Selecting previously unselected package libgfortran5:amd64.
311s Preparing to unpack .../041-libgfortran5_16-20260208-1ubuntu1_amd64.deb ...
311s Unpacking libgfortran5:amd64 (16-20260208-1ubuntu1) ...
311s Selecting previously unselected package libgfortran-15-dev:amd64.
311s Preparing to unpack .../042-libgfortran-15-dev_15.2.0-12ubuntu1_amd64.deb ...
311s Unpacking libgfortran-15-dev:amd64 (15.2.0-12ubuntu1) ...
311s Selecting previously unselected package gfortran-15-x86-64-linux-gnu.
311s Preparing to unpack .../043-gfortran-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ...
311s Unpacking gfortran-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
312s Selecting previously unselected package gfortran-15.
312s Preparing to unpack .../044-gfortran-15_15.2.0-12ubuntu1_amd64.deb ...
312s Unpacking gfortran-15 (15.2.0-12ubuntu1) ...
312s Selecting previously unselected package gfortran-x86-64-linux-gnu.
312s Preparing to unpack .../045-gfortran-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ...
312s Unpacking gfortran-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
312s Selecting previously unselected package gfortran.
312s Preparing to unpack .../046-gfortran_4%3a15.2.0-4ubuntu1_amd64.deb ...
312s Unpacking gfortran (4:15.2.0-4ubuntu1) ...
312s Selecting previously unselected package icu-devtools.
312s Preparing to unpack .../047-icu-devtools_78.2-1ubuntu1_amd64.deb ...
312s Unpacking icu-devtools (78.2-1ubuntu1) ...
312s Selecting previously unselected package javascript-common.
312s Preparing to unpack .../048-javascript-common_12+nmu1build1_all.deb ...
312s Unpacking javascript-common (12+nmu1build1) ...
312s Selecting previously unselected package libio-string-perl.
312s Preparing to unpack .../049-libio-string-perl_1.08-4_all.deb ...
312s Unpacking libio-string-perl (1.08-4) ...
312s Selecting previously unselected package liblatex-tounicode-perl.
312s Preparing to unpack .../050-liblatex-tounicode-perl_1.93-1_all.deb ...
312s Unpacking liblatex-tounicode-perl (1.93-1) ...
312s Selecting previously unselected package libbibtex-parser-perl.
312s Preparing to unpack .../051-libbibtex-parser-perl_1.93+dfsg-1_all.deb ...
312s Unpacking libbibtex-parser-perl (1.93+dfsg-1) ...
312s Selecting previously unselected package libblas3:amd64.
312s Preparing to unpack .../052-libblas3_3.12.1-7ubuntu1_amd64.deb ...
312s Unpacking libblas3:amd64 (3.12.1-7ubuntu1) ...
312s Selecting previously unselected package libblas-dev:amd64.
312s Preparing to unpack .../053-libblas-dev_3.12.1-7ubuntu1_amd64.deb ...
312s Unpacking libblas-dev:amd64 (3.12.1-7ubuntu1) ...
312s Selecting previously unselected package libboost1.90-dev:amd64.
312s Preparing to unpack .../054-libboost1.90-dev_1.90.0-2ubuntu1_amd64.deb ...
312s Unpacking libboost1.90-dev:amd64 (1.90.0-2ubuntu1) ...
313s Selecting previously unselected package libboost-dev:amd64.
313s Preparing to unpack .../055-libboost-dev_1.90.0.0ubuntu3_amd64.deb ...
313s Unpacking libboost-dev:amd64 (1.90.0.0ubuntu3) ...
313s Selecting previously unselected package libbz2-dev:amd64.
313s Preparing to unpack .../056-libbz2-dev_1.0.8-6build2_amd64.deb ...
313s Unpacking libbz2-dev:amd64 (1.0.8-6build2) ...
313s Selecting previously unselected package libpixman-1-0:amd64.
313s Preparing to unpack .../057-libpixman-1-0_0.46.4-1_amd64.deb ...
313s Unpacking libpixman-1-0:amd64 (0.46.4-1) ...
313s Selecting previously unselected package libxcb-render0:amd64.
313s Preparing to unpack .../058-libxcb-render0_1.17.0-2ubuntu1_amd64.deb ...
313s Unpacking libxcb-render0:amd64 (1.17.0-2ubuntu1) ...
313s Selecting previously unselected package libxcb-shm0:amd64.
313s Preparing to unpack .../059-libxcb-shm0_1.17.0-2ubuntu1_amd64.deb ...
313s Unpacking libxcb-shm0:amd64 (1.17.0-2ubuntu1) ...
313s Selecting previously unselected package libxrender1:amd64.
313s Preparing to unpack .../060-libxrender1_1%3a0.9.12-1_amd64.deb ...
313s Unpacking libxrender1:amd64 (1:0.9.12-1) ...
313s Selecting previously unselected package libcairo2:amd64.
313s Preparing to unpack .../061-libcairo2_1.18.4-3_amd64.deb ...
313s Unpacking libcairo2:amd64 (1.18.4-3) ...
313s Selecting previously unselected package libdatrie1:amd64.
313s Preparing to unpack .../062-libdatrie1_0.2.14-1_amd64.deb ...
313s Unpacking libdatrie1:amd64 (0.2.14-1) ...
313s Selecting previously unselected package libdeflate0:amd64.
313s Preparing to unpack .../063-libdeflate0_1.23-2build1_amd64.deb ...
313s Unpacking libdeflate0:amd64 (1.23-2build1) ...
313s Selecting previously unselected package libdeflate-dev:amd64.
313s Preparing to unpack .../064-libdeflate-dev_1.23-2build1_amd64.deb ...
313s Unpacking libdeflate-dev:amd64 (1.23-2build1) ...
313s Selecting previously unselected package libgraphite2-3:amd64.
313s Preparing to unpack .../065-libgraphite2-3_1.3.14-11ubuntu1_amd64.deb ...
313s Unpacking libgraphite2-3:amd64 (1.3.14-11ubuntu1) ...
313s Selecting previously unselected package libharfbuzz0b:amd64.
313s Preparing to unpack .../066-libharfbuzz0b_12.3.2-1_amd64.deb ...
313s Unpacking libharfbuzz0b:amd64 (12.3.2-1) ...
313s Selecting previously unselected package x11-common.
313s Preparing to unpack .../067-x11-common_1%3a7.7+24ubuntu1_all.deb ...
313s Unpacking x11-common (1:7.7+24ubuntu1) ...
313s Selecting previously unselected package libice6:amd64.
313s Preparing to unpack .../068-libice6_2%3a1.1.1-1build1_amd64.deb ...
313s Unpacking libice6:amd64 (2:1.1.1-1build1) ...
313s Selecting previously unselected package libicu-dev:amd64.
313s Preparing to unpack .../069-libicu-dev_78.2-1ubuntu1_amd64.deb ...
313s Unpacking libicu-dev:amd64 (78.2-1ubuntu1) ...
313s Selecting previously unselected package libjpeg-turbo8:amd64.
313s Preparing to unpack .../070-libjpeg-turbo8_2.1.5-4ubuntu3_amd64.deb ...
313s Unpacking libjpeg-turbo8:amd64 (2.1.5-4ubuntu3) ...
313s Selecting previously unselected package libjpeg-turbo8-dev:amd64.
313s Preparing to unpack .../071-libjpeg-turbo8-dev_2.1.5-4ubuntu3_amd64.deb ...
313s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-4ubuntu3) ...
313s Selecting previously unselected package libjpeg8:amd64.
313s Preparing to unpack .../072-libjpeg8_8c-2ubuntu12_amd64.deb ...
313s Unpacking libjpeg8:amd64 (8c-2ubuntu12) ...
313s Selecting previously unselected package libjpeg8-dev:amd64.
313s Preparing to unpack .../073-libjpeg8-dev_8c-2ubuntu12_amd64.deb ...
313s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu12) ...
313s Selecting previously unselected package libjpeg-dev:amd64.
313s Preparing to unpack .../074-libjpeg-dev_8c-2ubuntu12_amd64.deb ...
313s Unpacking libjpeg-dev:amd64 (8c-2ubuntu12) ...
313s Selecting previously unselected package libjs-bootstrap.
313s Preparing to unpack .../075-libjs-bootstrap_3.4.1+dfsg-6_all.deb ...
313s Unpacking libjs-bootstrap (3.4.1+dfsg-6) ...
313s Selecting previously unselected package libjs-popper.js.
313s Preparing to unpack .../076-libjs-popper.js_1.16.1+ds-6build1_all.deb ...
313s Unpacking libjs-popper.js (1.16.1+ds-6build1) ...
313s Selecting previously unselected package libjs-bootstrap4.
313s Preparing to unpack .../077-libjs-bootstrap4_4.6.2+dfsg-1_all.deb ...
313s Unpacking libjs-bootstrap4 (4.6.2+dfsg-1) ...
313s Selecting previously unselected package libjs-d3.
313s Preparing to unpack .../078-libjs-d3_3.5.17-4build1_all.deb ...
313s Unpacking libjs-d3 (3.5.17-4build1) ...
313s Selecting previously unselected package libjs-es5-shim.
313s Preparing to unpack .../079-libjs-es5-shim_4.6.7-2_all.deb ...
313s Unpacking libjs-es5-shim (4.6.7-2) ...
313s Selecting previously unselected package libjs-highlight.js.
313s Preparing to unpack .../080-libjs-highlight.js_10.7.3+dfsg-2_all.deb ...
313s Unpacking libjs-highlight.js (10.7.3+dfsg-2) ...
313s Selecting previously unselected package libjs-jquery.
313s Preparing to unpack .../081-libjs-jquery_3.7.1+dfsg+~3.5.33-1build1_all.deb ...
313s Unpacking libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ...
313s Selecting previously unselected package libjs-jquery-datatables.
313s Preparing to unpack .../082-libjs-jquery-datatables_1.11.5+dfsg-2build1_all.deb ...
313s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2build1) ...
313s Selecting previously unselected package libjs-sifter.js.
313s Preparing to unpack .../083-libjs-sifter.js_0.6.0+dfsg-3_all.deb ...
313s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ...
313s Selecting previously unselected package libjs-microplugin.js.
313s Preparing to unpack .../084-libjs-microplugin.js_0.0.3+dfsg-2_all.deb ...
313s Unpacking libjs-microplugin.js (0.0.3+dfsg-2) ...
313s Selecting previously unselected package libjs-jquery-selectize.js.
313s Preparing to unpack .../085-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ...
313s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ...
313s Selecting previously unselected package libjs-jquery-ui.
313s Preparing to unpack .../086-libjs-jquery-ui_1.13.2+dfsg-1build1_all.deb ...
313s Unpacking libjs-jquery-ui (1.13.2+dfsg-1build1) ...
313s Selecting previously unselected package libjs-json.
314s Preparing to unpack .../087-libjs-json_0~20221030+~1.0.8-1build1_all.deb ...
314s Unpacking libjs-json (0~20221030+~1.0.8-1build1) ...
314s Selecting previously unselected package libjs-lunr.
314s Preparing to unpack .../088-libjs-lunr_2.3.9~dfsg-2_all.deb ...
314s Unpacking libjs-lunr (2.3.9~dfsg-2) ...
314s Selecting previously unselected package libjs-prettify.
314s Preparing to unpack .../089-libjs-prettify_2015.12.04+dfsg-3_all.deb ...
314s Unpacking libjs-prettify (2015.12.04+dfsg-3) ...
314s Selecting previously unselected package libkpathsea6:amd64.
314s Preparing to unpack .../090-libkpathsea6_2025.20250727.75242+ds-5build1_amd64.deb ...
314s Unpacking libkpathsea6:amd64 (2025.20250727.75242+ds-5build1) ...
314s Selecting previously unselected package liblapack3:amd64.
314s Preparing to unpack .../091-liblapack3_3.12.1-7ubuntu1_amd64.deb ...
314s Unpacking liblapack3:amd64 (3.12.1-7ubuntu1) ...
314s Selecting previously unselected package liblapack-dev:amd64.
314s Preparing to unpack .../092-liblapack-dev_3.12.1-7ubuntu1_amd64.deb ...
314s Unpacking liblapack-dev:amd64 (3.12.1-7ubuntu1) ...
314s Selecting previously unselected package liblerc4:amd64.
314s Preparing to unpack .../093-liblerc4_4.0.0+ds-5ubuntu2_amd64.deb ...
314s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu2) ...
314s Selecting previously unselected package liblua5.4-0:amd64.
314s Preparing to unpack .../094-liblua5.4-0_5.4.8-1_amd64.deb ...
314s Unpacking liblua5.4-0:amd64 (5.4.8-1) ...
314s Selecting previously unselected package libmpfi0:amd64.
314s Preparing to unpack .../095-libmpfi0_1.5.4+ds-4build1_amd64.deb ...
314s Unpacking libmpfi0:amd64 (1.5.4+ds-4build1) ...
314s Selecting previously unselected package libncurses-dev:amd64.
314s Preparing to unpack .../096-libncurses-dev_6.6+20251231-1_amd64.deb ...
314s Unpacking libncurses-dev:amd64 (6.6+20251231-1) ...
314s Selecting previously unselected package libthai-data.
314s Preparing to unpack .../097-libthai-data_0.1.30-1_all.deb ...
314s Unpacking libthai-data (0.1.30-1) ...
314s Selecting previously unselected package libthai0:amd64.
314s Preparing to unpack .../098-libthai0_0.1.30-1_amd64.deb ...
314s Unpacking libthai0:amd64 (0.1.30-1) ...
314s Selecting previously unselected package libpango-1.0-0:amd64.
314s Preparing to unpack .../099-libpango-1.0-0_1.57.0-1_amd64.deb ...
314s Unpacking libpango-1.0-0:amd64 (1.57.0-1) ...
314s Selecting previously unselected package libpangoft2-1.0-0:amd64.
314s Preparing to unpack .../100-libpangoft2-1.0-0_1.57.0-1_amd64.deb ...
314s Unpacking libpangoft2-1.0-0:amd64 (1.57.0-1) ...
314s Selecting previously unselected package libpangocairo-1.0-0:amd64.
314s Preparing to unpack .../101-libpangocairo-1.0-0_1.57.0-1_amd64.deb ...
314s Unpacking libpangocairo-1.0-0:amd64 (1.57.0-1) ...
314s Selecting previously unselected package libpaper2:amd64.
314s Preparing to unpack .../102-libpaper2_2.2.5-0.3build1_amd64.deb ...
314s Unpacking libpaper2:amd64 (2.2.5-0.3build1) ...
314s Selecting previously unselected package libpaper-utils.
314s Preparing to unpack .../103-libpaper-utils_2.2.5-0.3build1_amd64.deb ...
314s Unpacking libpaper-utils (2.2.5-0.3build1) ...
314s Selecting previously unselected package libpcre2-16-0:amd64.
314s Preparing to unpack .../104-libpcre2-16-0_10.46-1_amd64.deb ...
314s Unpacking libpcre2-16-0:amd64 (10.46-1) ...
314s Selecting previously unselected package libpcre2-32-0:amd64.
314s Preparing to unpack .../105-libpcre2-32-0_10.46-1_amd64.deb ...
314s Unpacking libpcre2-32-0:amd64 (10.46-1) ...
314s Selecting previously unselected package libpcre2-posix3:amd64.
314s Preparing to unpack .../106-libpcre2-posix3_10.46-1_amd64.deb ...
314s Unpacking libpcre2-posix3:amd64 (10.46-1) ...
314s Selecting previously unselected package libpcre2-dev:amd64.
314s Preparing to unpack .../107-libpcre2-dev_10.46-1_amd64.deb ...
314s Unpacking libpcre2-dev:amd64 (10.46-1) ...
314s Selecting previously unselected package libpkgconf3:amd64.
314s Preparing to unpack .../108-libpkgconf3_1.8.1-4build1_amd64.deb ...
314s Unpacking libpkgconf3:amd64 (1.8.1-4build1) ...
314s Selecting previously unselected package zlib1g-dev:amd64.
314s Preparing to unpack .../109-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_amd64.deb ...
314s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ...
314s Selecting previously unselected package libpng-dev:amd64.
314s Preparing to unpack .../110-libpng-dev_1.6.54-1_amd64.deb ...
314s Unpacking libpng-dev:amd64 (1.6.54-1) ...
314s Selecting previously unselected package libpotrace0:amd64.
314s Preparing to unpack .../111-libpotrace0_1.16-2build2_amd64.deb ...
314s Unpacking libpotrace0:amd64 (1.16-2build2) ...
314s Selecting previously unselected package libptexenc1:amd64.
314s Preparing to unpack .../112-libptexenc1_2025.20250727.75242+ds-5build1_amd64.deb ...
314s Unpacking libptexenc1:amd64 (2025.20250727.75242+ds-5build1) ...
314s Selecting previously unselected package libreadline-dev:amd64.
314s Preparing to unpack .../113-libreadline-dev_8.3-3_amd64.deb ...
314s Unpacking libreadline-dev:amd64 (8.3-3) ...
314s Selecting previously unselected package libsharpyuv0:amd64.
314s Preparing to unpack .../114-libsharpyuv0_1.5.0-0.1build1_amd64.deb ...
314s Unpacking libsharpyuv0:amd64 (1.5.0-0.1build1) ...
314s Selecting previously unselected package libsm6:amd64.
314s Preparing to unpack .../115-libsm6_2%3a1.2.6-1build1_amd64.deb ...
314s Unpacking libsm6:amd64 (2:1.2.6-1build1) ...
314s Selecting previously unselected package libsynctex2:amd64.
314s Preparing to unpack .../116-libsynctex2_2025.20250727.75242+ds-5build1_amd64.deb ...
314s Unpacking libsynctex2:amd64 (2025.20250727.75242+ds-5build1) ...
314s Selecting previously unselected package libtcl8.6:amd64.
314s Preparing to unpack .../117-libtcl8.6_8.6.17+dfsg-1build1_amd64.deb ...
314s Unpacking libtcl8.6:amd64 (8.6.17+dfsg-1build1) ...
314s Selecting previously unselected package libteckit0:amd64.
314s Preparing to unpack .../118-libteckit0_2.5.13+ds-1_amd64.deb ...
314s Unpacking libteckit0:amd64 (2.5.13+ds-1) ...
314s Selecting previously unselected package libtexlua53-5:amd64.
314s Preparing to unpack .../119-libtexlua53-5_2025.20250727.75242+ds-5build1_amd64.deb ...
314s Unpacking libtexlua53-5:amd64 (2025.20250727.75242+ds-5build1) ...
314s Selecting previously unselected package libjbig0:amd64.
314s Preparing to unpack .../120-libjbig0_2.1-6.1ubuntu3_amd64.deb ...
314s Unpacking libjbig0:amd64 (2.1-6.1ubuntu3) ...
314s Selecting previously unselected package libwebp7:amd64.
314s Preparing to unpack .../121-libwebp7_1.5.0-0.1build1_amd64.deb ...
314s Unpacking libwebp7:amd64 (1.5.0-0.1build1) ...
314s Selecting previously unselected package libtiff6:amd64.
314s Preparing to unpack .../122-libtiff6_4.7.0-3ubuntu3_amd64.deb ...
314s Unpacking libtiff6:amd64 (4.7.0-3ubuntu3) ...
314s Selecting previously unselected package libxft2:amd64.
314s Preparing to unpack .../123-libxft2_2.3.6-1build2_amd64.deb ...
314s Unpacking libxft2:amd64 (2.3.6-1build2) ...
314s Selecting previously unselected package libxss1:amd64.
314s Preparing to unpack .../124-libxss1_1%3a1.2.3-1build4_amd64.deb ...
314s Unpacking libxss1:amd64 (1:1.2.3-1build4) ...
314s Selecting previously unselected package libtk8.6:amd64.
314s Preparing to unpack .../125-libtk8.6_8.6.17-1_amd64.deb ...
314s Unpacking libtk8.6:amd64 (8.6.17-1) ...
314s Selecting previously unselected package libxt6t64:amd64.
314s Preparing to unpack .../126-libxt6t64_1%3a1.2.1-1.3_amd64.deb ...
314s Unpacking libxt6t64:amd64 (1:1.2.1-1.3) ...
314s Selecting previously unselected package libxmu6:amd64.
314s Preparing to unpack .../127-libxmu6_2%3a1.1.3-4_amd64.deb ...
314s Unpacking libxmu6:amd64 (2:1.1.3-4) ...
314s Selecting previously unselected package libxpm4:amd64.
314s Preparing to unpack .../128-libxpm4_1%3a3.5.17-1build3_amd64.deb ...
314s Unpacking libxpm4:amd64 (1:3.5.17-1build3) ...
314s Selecting previously unselected package libxaw7:amd64.
314s Preparing to unpack .../129-libxaw7_2%3a1.0.16-1build1_amd64.deb ...
314s Unpacking libxaw7:amd64 (2:1.0.16-1build1) ...
314s Selecting previously unselected package libxi6:amd64.
314s Preparing to unpack .../130-libxi6_2%3a1.8.2-2_amd64.deb ...
314s Unpacking libxi6:amd64 (2:1.8.2-2) ...
314s Selecting previously unselected package libzstd-dev:amd64.
314s Preparing to unpack .../131-libzstd-dev_1.5.7+dfsg-3_amd64.deb ...
314s Unpacking libzstd-dev:amd64 (1.5.7+dfsg-3) ...
315s Selecting previously unselected package libzzip-0-13t64:amd64.
315s Preparing to unpack .../132-libzzip-0-13t64_0.13.78+dfsg.1-0.2_amd64.deb ...
315s Unpacking libzzip-0-13t64:amd64 (0.13.78+dfsg.1-0.2) ...
315s Selecting previously unselected package node-bootstrap-sass.
315s Preparing to unpack .../133-node-bootstrap-sass_3.4.3-2_all.deb ...
315s Unpacking node-bootstrap-sass (3.4.3-2) ...
315s Selecting previously unselected package node-html5shiv.
315s Preparing to unpack .../134-node-html5shiv_3.7.3+dfsg-5_all.deb ...
315s Unpacking node-html5shiv (3.7.3+dfsg-5) ...
315s Selecting previously unselected package node-normalize.css.
315s Preparing to unpack .../135-node-normalize.css_8.0.1-5.1_all.deb ...
315s Unpacking node-normalize.css (8.0.1-5.1) ...
315s Selecting previously unselected package pandoc-data.
315s Preparing to unpack .../136-pandoc-data_3.1.11.1-3build1_all.deb ...
315s Unpacking pandoc-data (3.1.11.1-3build1) ...
315s Selecting previously unselected package pandoc.
315s Preparing to unpack .../137-pandoc_3.1.11.1+ds-4_amd64.deb ...
315s Unpacking pandoc (3.1.11.1+ds-4) ...
315s Selecting previously unselected package zip.
315s Preparing to unpack .../138-zip_3.0-15ubuntu3_amd64.deb ...
315s Unpacking zip (3.0-15ubuntu3) ...
315s Selecting previously unselected package unzip.
315s Preparing to unpack .../139-unzip_6.0-29ubuntu1_amd64.deb ...
315s Unpacking unzip (6.0-29ubuntu1) ...
315s Selecting previously unselected package xdg-utils.
315s Preparing to unpack .../140-xdg-utils_1.2.1-2ubuntu2_all.deb ...
315s Unpacking xdg-utils (1.2.1-2ubuntu2) ...
315s Selecting previously unselected package r-base-core.
315s Preparing to unpack .../141-r-base-core_4.5.2-1ubuntu2_amd64.deb ...
315s Unpacking r-base-core (4.5.2-1ubuntu2) ...
315s Selecting previously unselected package liblzma-dev:amd64.
315s Preparing to unpack .../142-liblzma-dev_5.8.2-2_amd64.deb ...
315s Unpacking liblzma-dev:amd64 (5.8.2-2) ...
315s Selecting previously unselected package pkgconf-bin.
316s Preparing to unpack .../143-pkgconf-bin_1.8.1-4build1_amd64.deb ...
316s Unpacking pkgconf-bin (1.8.1-4build1) ...
316s Selecting previously unselected package pkgconf:amd64.
316s Preparing to unpack .../144-pkgconf_1.8.1-4build1_amd64.deb ...
316s Unpacking pkgconf:amd64 (1.8.1-4build1) ...
316s Selecting previously unselected package libtirpc-dev:amd64.
316s Preparing to unpack .../145-libtirpc-dev_1.3.6+ds-1_amd64.deb ...
316s Unpacking libtirpc-dev:amd64 (1.3.6+ds-1) ...
316s Selecting previously unselected package r-base-dev.
316s Preparing to unpack .../146-r-base-dev_4.5.2-1ubuntu2_all.deb ...
316s Unpacking r-base-dev (4.5.2-1ubuntu2) ...
316s Selecting previously unselected package pkg-r-autopkgtest.
316s Preparing to unpack .../147-pkg-r-autopkgtest_20250812_all.deb ...
316s Unpacking pkg-r-autopkgtest (20250812) ...
316s Selecting previously unselected package r-bioc-biocgenerics.
316s Preparing to unpack .../148-r-bioc-biocgenerics_0.52.0-2_all.deb ...
316s Unpacking r-bioc-biocgenerics (0.52.0-2) ...
316s Selecting previously unselected package r-bioc-biobase.
316s Preparing to unpack .../149-r-bioc-biobase_2.66.0-2_amd64.deb ...
316s Unpacking r-bioc-biobase (2.66.0-2) ...
316s Selecting previously unselected package r-bioc-s4vectors.
316s Preparing to unpack .../150-r-bioc-s4vectors_0.44.0+dfsg-2_amd64.deb ...
316s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ...
316s Selecting previously unselected package r-bioc-iranges.
316s Preparing to unpack .../151-r-bioc-iranges_2.40.1-3_amd64.deb ...
316s Unpacking r-bioc-iranges (2.40.1-3) ...
316s Selecting previously unselected package r-cran-dbi.
316s Preparing to unpack .../152-r-cran-dbi_1.2.3-1build1_all.deb ...
316s Unpacking r-cran-dbi (1.2.3-1build1) ...
316s Selecting previously unselected package r-cran-bit.
316s Preparing to unpack .../153-r-cran-bit_4.6.0+dfsg-1_amd64.deb ...
316s Unpacking r-cran-bit (4.6.0+dfsg-1) ...
316s Selecting previously unselected package r-cran-bit64.
316s Preparing to unpack .../154-r-cran-bit64_4.6.0-1-4_amd64.deb ...
316s Unpacking r-cran-bit64 (4.6.0-1-4) ...
316s Selecting previously unselected package r-cran-rlang.
316s Preparing to unpack .../155-r-cran-rlang_1.1.5-3_amd64.deb ...
316s Unpacking r-cran-rlang (1.1.5-3) ...
316s Selecting previously unselected package r-cran-cli.
316s Preparing to unpack .../156-r-cran-cli_3.6.4-1_amd64.deb ...
316s Unpacking r-cran-cli (3.6.4-1) ...
316s Selecting previously unselected package r-cran-glue.
316s Preparing to unpack .../157-r-cran-glue_1.8.0-1_amd64.deb ...
316s Unpacking r-cran-glue (1.8.0-1) ...
316s Selecting previously unselected package r-cran-lifecycle.
316s Preparing to unpack .../158-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ...
316s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ...
316s Selecting previously unselected package r-cran-vctrs.
316s Preparing to unpack .../159-r-cran-vctrs_0.6.5-1_amd64.deb ...
316s Unpacking r-cran-vctrs (0.6.5-1) ...
316s Selecting previously unselected package r-cran-blob.
316s Preparing to unpack .../160-r-cran-blob_1.3.0-1_all.deb ...
316s Unpacking r-cran-blob (1.3.0-1) ...
316s Selecting previously unselected package r-cran-fastmap.
316s Preparing to unpack .../161-r-cran-fastmap_1.2.0-1_amd64.deb ...
316s Unpacking r-cran-fastmap (1.2.0-1) ...
316s Selecting previously unselected package r-cran-cachem.
316s Preparing to unpack .../162-r-cran-cachem_1.1.0-1_amd64.deb ...
316s Unpacking r-cran-cachem (1.1.0-1) ...
316s Selecting previously unselected package r-cran-memoise.
316s Preparing to unpack .../163-r-cran-memoise_2.0.1-1build1_all.deb ...
316s Unpacking r-cran-memoise (2.0.1-1build1) ...
316s Selecting previously unselected package r-cran-pkgconfig.
316s Preparing to unpack .../164-r-cran-pkgconfig_2.0.3-2build2_all.deb ...
316s Unpacking r-cran-pkgconfig (2.0.3-2build2) ...
316s Selecting previously unselected package r-cran-plogr.
316s Preparing to unpack .../165-r-cran-plogr_0.2.0-3build2_all.deb ...
316s Unpacking r-cran-plogr (0.2.0-3build2) ...
316s Selecting previously unselected package r-cran-cpp11.
316s Preparing to unpack .../166-r-cran-cpp11_0.5.3-1_all.deb ...
316s Unpacking r-cran-cpp11 (0.5.3-1) ...
316s Selecting previously unselected package r-cran-rsqlite.
316s Preparing to unpack .../167-r-cran-rsqlite_2.3.9-1_amd64.deb ...
316s Unpacking r-cran-rsqlite (2.3.9-1) ...
316s Selecting previously unselected package r-cran-curl.
316s Preparing to unpack .../168-r-cran-curl_7.0.0+dfsg-1_amd64.deb ...
316s Unpacking r-cran-curl (7.0.0+dfsg-1) ...
316s Selecting previously unselected package r-cran-jsonlite.
316s Preparing to unpack .../169-r-cran-jsonlite_1.9.1+dfsg-1_amd64.deb ...
316s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ...
316s Selecting previously unselected package r-cran-mime.
316s Preparing to unpack .../170-r-cran-mime_0.12-2_amd64.deb ...
316s Unpacking r-cran-mime (0.12-2) ...
316s Selecting previously unselected package r-cran-sys.
316s Preparing to unpack .../171-r-cran-sys_3.4.3-1_amd64.deb ...
316s Unpacking r-cran-sys (3.4.3-1) ...
316s Selecting previously unselected package r-cran-askpass.
316s Preparing to unpack .../172-r-cran-askpass_1.2.1-1_amd64.deb ...
316s Unpacking r-cran-askpass (1.2.1-1) ...
316s Selecting previously unselected package r-cran-openssl.
316s Preparing to unpack .../173-r-cran-openssl_2.3.2+dfsg-1_amd64.deb ...
316s Unpacking r-cran-openssl (2.3.2+dfsg-1) ...
316s Selecting previously unselected package r-cran-r6.
316s Preparing to unpack .../174-r-cran-r6_2.6.1-1_all.deb ...
316s Unpacking r-cran-r6 (2.6.1-1) ...
316s Selecting previously unselected package r-cran-httr.
316s Preparing to unpack .../175-r-cran-httr_1.4.7+dfsg-1_all.deb ...
316s Unpacking r-cran-httr (1.4.7+dfsg-1) ...
316s Selecting previously unselected package r-cran-png.
316s Preparing to unpack .../176-r-cran-png_0.1-8-1build2_amd64.deb ...
316s Unpacking r-cran-png (0.1-8-1build2) ...
316s Selecting previously unselected package r-bioc-zlibbioc.
316s Preparing to unpack .../177-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ...
316s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ...
316s Selecting previously unselected package r-bioc-xvector.
316s Preparing to unpack .../178-r-bioc-xvector_0.46.0-2_amd64.deb ...
316s Unpacking r-bioc-xvector (0.46.0-2) ...
316s Selecting previously unselected package r-bioc-ucsc.utils.
316s Preparing to unpack .../179-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ...
316s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ...
316s Selecting previously unselected package r-bioc-genomeinfodbdata.
316s Preparing to unpack .../180-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ...
316s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ...
317s Selecting previously unselected package r-bioc-genomeinfodb.
317s Preparing to unpack .../181-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ...
317s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ...
317s Selecting previously unselected package r-cran-crayon.
317s Preparing to unpack .../182-r-cran-crayon_1.5.3-1_all.deb ...
317s Unpacking r-cran-crayon (1.5.3-1) ...
317s Selecting previously unselected package r-bioc-biostrings.
317s Preparing to unpack .../183-r-bioc-biostrings_2.74.1+dfsg-2_amd64.deb ...
317s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ...
317s Selecting previously unselected package r-bioc-keggrest.
317s Preparing to unpack .../184-r-bioc-keggrest_1.46.0+dfsg-3_all.deb ...
317s Unpacking r-bioc-keggrest (1.46.0+dfsg-3) ...
317s Selecting previously unselected package r-bioc-annotationdbi.
317s Preparing to unpack .../185-r-bioc-annotationdbi_1.68.0-2_all.deb ...
317s Unpacking r-bioc-annotationdbi (1.68.0-2) ...
317s Selecting previously unselected package r-bioc-genomicranges.
317s Preparing to unpack .../186-r-bioc-genomicranges_1.58.0+dfsg-2_amd64.deb ...
317s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ...
317s Selecting previously unselected package r-cran-lazyeval.
317s Preparing to unpack .../187-r-cran-lazyeval_0.2.2-1build2_amd64.deb ...
317s Unpacking r-cran-lazyeval (0.2.2-1build2) ...
317s Selecting previously unselected package r-bioc-annotationfilter.
317s Preparing to unpack .../188-r-bioc-annotationfilter_1.30.0+dfsg-2_all.deb ...
317s Unpacking r-bioc-annotationfilter (1.30.0+dfsg-2) ...
317s Selecting previously unselected package r-cran-generics.
317s Preparing to unpack .../189-r-cran-generics_0.1.4-1_all.deb ...
317s Unpacking r-cran-generics (0.1.4-1) ...
317s Selecting previously unselected package r-cran-magrittr.
317s Preparing to unpack .../190-r-cran-magrittr_2.0.3-1_amd64.deb ...
317s Unpacking r-cran-magrittr (2.0.3-1) ...
317s Selecting previously unselected package r-cran-utf8.
317s Preparing to unpack .../191-r-cran-utf8_1.2.4-1_amd64.deb ...
317s Unpacking r-cran-utf8 (1.2.4-1) ...
317s Selecting previously unselected package r-cran-pillar.
317s Preparing to unpack .../192-r-cran-pillar_1.11.1+dfsg-1_all.deb ...
317s Unpacking r-cran-pillar (1.11.1+dfsg-1) ...
317s Selecting previously unselected package r-cran-fansi.
317s Preparing to unpack .../193-r-cran-fansi_1.0.6-2_amd64.deb ...
317s Unpacking r-cran-fansi (1.0.6-2) ...
317s Selecting previously unselected package r-cran-tibble.
317s Preparing to unpack .../194-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ...
317s Unpacking r-cran-tibble (3.2.1+dfsg-3) ...
317s Selecting previously unselected package r-cran-withr.
317s Preparing to unpack .../195-r-cran-withr_3.0.2+dfsg-1_all.deb ...
317s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
317s Selecting previously unselected package r-cran-tidyselect.
317s Preparing to unpack .../196-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ...
317s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ...
317s Selecting previously unselected package r-cran-dplyr.
317s Preparing to unpack .../197-r-cran-dplyr_1.1.4-4_amd64.deb ...
317s Unpacking r-cran-dplyr (1.1.4-4) ...
317s Selecting previously unselected package r-cran-purrr.
317s Preparing to unpack .../198-r-cran-purrr_1.0.4-1_amd64.deb ...
317s Unpacking r-cran-purrr (1.0.4-1) ...
317s Selecting previously unselected package r-cran-stringi.
317s Preparing to unpack .../199-r-cran-stringi_1.8.4-1build2_amd64.deb ...
317s Unpacking r-cran-stringi (1.8.4-1build2) ...
317s Selecting previously unselected package r-cran-stringr.
317s Preparing to unpack .../200-r-cran-stringr_1.5.1-1_all.deb ...
317s Unpacking r-cran-stringr (1.5.1-1) ...
317s Selecting previously unselected package r-cran-tidyr.
317s Preparing to unpack .../201-r-cran-tidyr_1.3.1-1_amd64.deb ...
317s Unpacking r-cran-tidyr (1.3.1-1) ...
317s Selecting previously unselected package r-cran-dbplyr.
317s Preparing to unpack .../202-r-cran-dbplyr_2.5.1+dfsg-1_all.deb ...
317s Unpacking r-cran-dbplyr (2.5.1+dfsg-1) ...
317s Selecting previously unselected package r-cran-filelock.
317s Preparing to unpack .../203-r-cran-filelock_1.0.3-1_amd64.deb ...
317s Unpacking r-cran-filelock (1.0.3-1) ...
317s Selecting previously unselected package r-bioc-biocfilecache.
317s Preparing to unpack .../204-r-bioc-biocfilecache_2.14.0+dfsg-2_all.deb ...
317s Unpacking r-bioc-biocfilecache (2.14.0+dfsg-2) ...
317s Selecting previously unselected package r-bioc-biocio.
317s Preparing to unpack .../205-r-bioc-biocio_1.16.0+dfsg-2_all.deb ...
317s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ...
317s Selecting previously unselected package r-cran-formatr.
317s Preparing to unpack .../206-r-cran-formatr_1.14-2_all.deb ...
317s Unpacking r-cran-formatr (1.14-2) ...
317s Selecting previously unselected package r-cran-lambda.r.
317s Preparing to unpack .../207-r-cran-lambda.r_1.2.4-2build2_all.deb ...
317s Unpacking r-cran-lambda.r (1.2.4-2build2) ...
317s Selecting previously unselected package r-cran-futile.options.
317s Preparing to unpack .../208-r-cran-futile.options_1.0.1-3build2_all.deb ...
317s Unpacking r-cran-futile.options (1.0.1-3build2) ...
317s Selecting previously unselected package r-cran-futile.logger.
317s Preparing to unpack .../209-r-cran-futile.logger_1.4.3-4build2_all.deb ...
317s Unpacking r-cran-futile.logger (1.4.3-4build2) ...
317s Selecting previously unselected package r-cran-snow.
317s Preparing to unpack .../210-r-cran-snow_1%3a0.4.4-2build1_all.deb ...
317s Unpacking r-cran-snow (1:0.4.4-2build1) ...
317s Selecting previously unselected package r-cran-codetools.
317s Preparing to unpack .../211-r-cran-codetools_0.2-20-1build1_all.deb ...
317s Unpacking r-cran-codetools (0.2-20-1build1) ...
317s Selecting previously unselected package r-cran-bh.
317s Preparing to unpack .../212-r-cran-bh_1.84.0-1_all.deb ...
317s Unpacking r-cran-bh (1.84.0-1) ...
317s Selecting previously unselected package r-bioc-biocparallel.
317s Preparing to unpack .../213-r-bioc-biocparallel_1.40.0-2_amd64.deb ...
317s Unpacking r-bioc-biocparallel (1.40.0-2) ...
317s Selecting previously unselected package r-cran-base64enc.
317s Preparing to unpack .../214-r-cran-base64enc_0.1-3-3build1_amd64.deb ...
317s Unpacking r-cran-base64enc (0.1-3-3build1) ...
318s Selecting previously unselected package r-cran-digest.
318s Preparing to unpack .../215-r-cran-digest_0.6.39-1_amd64.deb ...
318s Unpacking r-cran-digest (0.6.39-1) ...
318s Selecting previously unselected package r-cran-htmltools.
318s Preparing to unpack .../216-r-cran-htmltools_0.5.8.1-1_amd64.deb ...
318s Unpacking r-cran-htmltools (0.5.8.1-1) ...
318s Selecting previously unselected package r-cran-evaluate.
318s Preparing to unpack .../217-r-cran-evaluate_1.0.5-1_all.deb ...
318s Unpacking r-cran-evaluate (1.0.5-1) ...
318s Selecting previously unselected package r-cran-xfun.
318s Preparing to unpack .../218-r-cran-xfun_0.55+dfsg-1_amd64.deb ...
318s Unpacking r-cran-xfun (0.55+dfsg-1) ...
318s Selecting previously unselected package r-cran-highr.
318s Preparing to unpack .../219-r-cran-highr_0.11+dfsg-1_all.deb ...
318s Unpacking r-cran-highr (0.11+dfsg-1) ...
318s Selecting previously unselected package r-cran-yaml.
318s Preparing to unpack .../220-r-cran-yaml_2.3.10-1_amd64.deb ...
318s Unpacking r-cran-yaml (2.3.10-1) ...
318s Selecting previously unselected package libjs-mathjax.
318s Preparing to unpack .../221-libjs-mathjax_2.7.9+dfsg-1build1_all.deb ...
318s Unpacking libjs-mathjax (2.7.9+dfsg-1build1) ...
318s Selecting previously unselected package r-cran-knitr.
318s Preparing to unpack .../222-r-cran-knitr_1.51+dfsg-1_all.deb ...
318s Unpacking r-cran-knitr (1.51+dfsg-1) ...
318s Selecting previously unselected package r-cran-jquerylib.
318s Preparing to unpack .../223-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ...
318s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ...
318s Selecting previously unselected package r-cran-fs.
318s Preparing to unpack .../224-r-cran-fs_1.6.5+dfsg-1_amd64.deb ...
318s Unpacking r-cran-fs (1.6.5+dfsg-1) ...
318s Selecting previously unselected package r-cran-rappdirs.
318s Preparing to unpack .../225-r-cran-rappdirs_0.3.3-1build1_amd64.deb ...
318s Unpacking r-cran-rappdirs (0.3.3-1build1) ...
318s Selecting previously unselected package r-cran-sass.
318s Preparing to unpack .../226-r-cran-sass_0.4.9+dfsg-1_amd64.deb ...
318s Unpacking r-cran-sass (0.4.9+dfsg-1) ...
318s Selecting previously unselected package r-cran-bslib.
318s Preparing to unpack .../227-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ...
318s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ...
318s Selecting previously unselected package r-cran-fontawesome.
318s Preparing to unpack .../228-r-cran-fontawesome_0.5.3-1_all.deb ...
318s Unpacking r-cran-fontawesome (0.5.3-1) ...
318s Selecting previously unselected package r-cran-tinytex.
318s Preparing to unpack .../229-r-cran-tinytex_0.58-1_all.deb ...
318s Unpacking r-cran-tinytex (0.58-1) ...
318s Selecting previously unselected package libjs-modernizr.
318s Preparing to unpack .../230-libjs-modernizr_3.13.0-0.1build1_all.deb ...
318s Unpacking libjs-modernizr (3.13.0-0.1build1) ...
318s Selecting previously unselected package r-cran-littler.
318s Preparing to unpack .../231-r-cran-littler_0.3.22-1_amd64.deb ...
318s Unpacking r-cran-littler (0.3.22-1) ...
318s Selecting previously unselected package r-cran-pkgkitten.
318s Preparing to unpack .../232-r-cran-pkgkitten_0.2.4-1_all.deb ...
318s Unpacking r-cran-pkgkitten (0.2.4-1) ...
318s Selecting previously unselected package r-cran-rcpp.
318s Preparing to unpack .../233-r-cran-rcpp_1.1.0-1_amd64.deb ...
318s Unpacking r-cran-rcpp (1.1.0-1) ...
318s Selecting previously unselected package r-cran-later.
318s Preparing to unpack .../234-r-cran-later_1.4.1+dfsg-1_amd64.deb ...
318s Unpacking r-cran-later (1.4.1+dfsg-1) ...
318s Selecting previously unselected package r-cran-promises.
318s Preparing to unpack .../235-r-cran-promises_1.3.2+dfsg-1_amd64.deb ...
318s Unpacking r-cran-promises (1.3.2+dfsg-1) ...
318s Selecting previously unselected package r-cran-httpuv.
318s Preparing to unpack .../236-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ...
318s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ...
318s Selecting previously unselected package r-cran-xtable.
318s Preparing to unpack .../237-r-cran-xtable_1%3a1.8-4-2build1_all.deb ...
318s Unpacking r-cran-xtable (1:1.8-4-2build1) ...
318s Selecting previously unselected package r-cran-sourcetools.
318s Preparing to unpack .../238-r-cran-sourcetools_0.1.7-1-1_amd64.deb ...
318s Unpacking r-cran-sourcetools (0.1.7-1-1) ...
318s Selecting previously unselected package r-cran-commonmark.
318s Preparing to unpack .../239-r-cran-commonmark_1.9.5-1_amd64.deb ...
318s Unpacking r-cran-commonmark (1.9.5-1) ...
318s Selecting previously unselected package libjs-twitter-bootstrap-datepicker.
318s Preparing to unpack .../240-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ...
318s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ...
318s Selecting previously unselected package r-cran-shiny.
318s Preparing to unpack .../241-r-cran-shiny_1.10.0+dfsg-2_all.deb ...
318s Unpacking r-cran-shiny (1.10.0+dfsg-2) ...
318s Selecting previously unselected package r-cran-rmarkdown.
319s Preparing to unpack .../242-r-cran-rmarkdown_2.30+dfsg-1_all.deb ...
319s Unpacking r-cran-rmarkdown (2.30+dfsg-1) ...
319s Selecting previously unselected package r-cran-bookdown.
319s Preparing to unpack .../243-r-cran-bookdown_0.42+dfsg-1_all.deb ...
319s Unpacking r-cran-bookdown (0.42+dfsg-1) ...
319s Selecting previously unselected package r-cran-biocmanager.
319s Preparing to unpack .../244-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ...
319s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ...
319s Selecting previously unselected package tex-common.
319s Preparing to unpack .../245-tex-common_6.20_all.deb ...
319s Unpacking tex-common (6.20) ...
319s Selecting previously unselected package t1utils.
319s Preparing to unpack .../246-t1utils_1.41-4build4_amd64.deb ...
319s Unpacking t1utils (1.41-4build4) ...
319s Selecting previously unselected package texlive-binaries.
319s Preparing to unpack .../247-texlive-binaries_2025.20250727.75242+ds-5build1_amd64.deb ...
319s Unpacking texlive-binaries (2025.20250727.75242+ds-5build1) ...
319s Selecting previously unselected package texlive-base.
319s Preparing to unpack .../248-texlive-base_2025.20260124-1_all.deb ...
319s Unpacking texlive-base (2025.20260124-1) ...
319s Selecting previously unselected package texlive-latex-base.
319s Preparing to unpack .../249-texlive-latex-base_2025.20260124-1_all.deb ...
319s Unpacking texlive-latex-base (2025.20260124-1) ...
319s Selecting previously unselected package texlive-bibtex-extra.
320s Preparing to unpack .../250-texlive-bibtex-extra_2025.20260124-1_all.deb ...
320s Unpacking texlive-bibtex-extra (2025.20260124-1) ...
321s Selecting previously unselected package r-bioc-biocversion.
321s Preparing to unpack .../251-r-bioc-biocversion_3.20.0-2_all.deb ...
321s Unpacking r-bioc-biocversion (3.20.0-2) ...
321s Selecting previously unselected package r-bioc-biocstyle.
321s Preparing to unpack .../252-r-bioc-biocstyle_2.34.0+dfsg-1_all.deb ...
321s Unpacking r-bioc-biocstyle (2.34.0+dfsg-1) ...
321s Selecting previously unselected package r-cran-hms.
321s Preparing to unpack .../253-r-cran-hms_1.1.4-1_all.deb ...
321s Unpacking r-cran-hms (1.1.4-1) ...
321s Selecting previously unselected package r-cran-prettyunits.
321s Preparing to unpack .../254-r-cran-prettyunits_1.2.0-1_all.deb ...
321s Unpacking r-cran-prettyunits (1.2.0-1) ...
321s Selecting previously unselected package r-cran-progress.
321s Preparing to unpack .../255-r-cran-progress_1.2.3-1_all.deb ...
321s Unpacking r-cran-progress (1.2.3-1) ...
321s Selecting previously unselected package r-cran-httr2.
321s Preparing to unpack .../256-r-cran-httr2_1.1.1-2_all.deb ...
321s Unpacking r-cran-httr2 (1.1.1-2) ...
321s Selecting previously unselected package r-cran-xml2.
321s Preparing to unpack .../257-r-cran-xml2_1.4.1-1_amd64.deb ...
321s Unpacking r-cran-xml2 (1.4.1-1) ...
321s Selecting previously unselected package r-bioc-biomart.
321s Preparing to unpack .../258-r-bioc-biomart_2.62.1+dfsg-1_all.deb ...
321s Unpacking r-bioc-biomart (2.62.1+dfsg-1) ...
321s Selecting previously unselected package r-cran-farver.
321s Preparing to unpack .../259-r-cran-farver_2.1.2-1_amd64.deb ...
321s Unpacking r-cran-farver (2.1.2-1) ...
321s Selecting previously unselected package r-cran-labeling.
321s Preparing to unpack .../260-r-cran-labeling_0.4.3-1_all.deb ...
321s Unpacking r-cran-labeling (0.4.3-1) ...
321s Selecting previously unselected package r-cran-rcolorbrewer.
321s Preparing to unpack .../261-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ...
321s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ...
321s Selecting previously unselected package r-cran-viridislite.
321s Preparing to unpack .../262-r-cran-viridislite_0.4.3-1_all.deb ...
321s Unpacking r-cran-viridislite (0.4.3-1) ...
321s Selecting previously unselected package r-cran-scales.
321s Preparing to unpack .../263-r-cran-scales_1.4.0-1_all.deb ...
321s Unpacking r-cran-scales (1.4.0-1) ...
321s Selecting previously unselected package r-cran-gtable.
321s Preparing to unpack .../264-r-cran-gtable_0.3.6+dfsg-1_all.deb ...
321s Unpacking r-cran-gtable (0.3.6+dfsg-1) ...
321s Selecting previously unselected package r-cran-isoband.
321s Preparing to unpack .../265-r-cran-isoband_0.2.7-1_amd64.deb ...
321s Unpacking r-cran-isoband (0.2.7-1) ...
321s Selecting previously unselected package r-cran-mass.
321s Preparing to unpack .../266-r-cran-mass_7.3-65-1_amd64.deb ...
321s Unpacking r-cran-mass (7.3-65-1) ...
321s Selecting previously unselected package r-cran-lattice.
321s Preparing to unpack .../267-r-cran-lattice_0.22-9-1_amd64.deb ...
321s Unpacking r-cran-lattice (0.22-9-1) ...
321s Selecting previously unselected package r-cran-nlme.
321s Preparing to unpack .../268-r-cran-nlme_3.1.168-1_amd64.deb ...
321s Unpacking r-cran-nlme (3.1.168-1) ...
321s Selecting previously unselected package r-cran-matrix.
321s Preparing to unpack .../269-r-cran-matrix_1.7-4-1_amd64.deb ...
321s Unpacking r-cran-matrix (1.7-4-1) ...
321s Selecting previously unselected package r-cran-mgcv.
321s Preparing to unpack .../270-r-cran-mgcv_1.9-4-1_amd64.deb ...
321s Unpacking r-cran-mgcv (1.9-4-1) ...
321s Selecting previously unselected package r-cran-ggplot2.
321s Preparing to unpack .../271-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ...
321s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ...
321s Selecting previously unselected package r-cran-cluster.
321s Preparing to unpack .../272-r-cran-cluster_2.1.8.2-1_amd64.deb ...
321s Unpacking r-cran-cluster (2.1.8.2-1) ...
321s Selecting previously unselected package r-cran-survival.
321s Preparing to unpack .../273-r-cran-survival_3.8-6-1_amd64.deb ...
321s Unpacking r-cran-survival (3.8-6-1) ...
321s Selecting previously unselected package r-cran-rpart.
321s Preparing to unpack .../274-r-cran-rpart_4.1.24-1build1_amd64.deb ...
321s Unpacking r-cran-rpart (4.1.24-1build1) ...
321s Selecting previously unselected package r-cran-nnet.
321s Preparing to unpack .../275-r-cran-nnet_7.3-20-1_amd64.deb ...
321s Unpacking r-cran-nnet (7.3-20-1) ...
321s Selecting previously unselected package r-cran-foreign.
321s Preparing to unpack .../276-r-cran-foreign_0.8.91-1_amd64.deb ...
321s Unpacking r-cran-foreign (0.8.91-1) ...
321s Selecting previously unselected package r-cran-gridextra.
321s Preparing to unpack .../277-r-cran-gridextra_2.3-3build2_all.deb ...
321s Unpacking r-cran-gridextra (2.3-3build2) ...
321s Selecting previously unselected package r-cran-data.table.
321s Preparing to unpack .../278-r-cran-data.table_1.17.0+dfsg-1_amd64.deb ...
321s Unpacking r-cran-data.table (1.17.0+dfsg-1) ...
322s Selecting previously unselected package r-cran-backports.
322s Preparing to unpack .../279-r-cran-backports_1.5.0-2_amd64.deb ...
322s Unpacking r-cran-backports (1.5.0-2) ...
322s Selecting previously unselected package r-cran-checkmate.
322s Preparing to unpack .../280-r-cran-checkmate_2.3.2-1_amd64.deb ...
322s Unpacking r-cran-checkmate (2.3.2-1) ...
322s Selecting previously unselected package r-cran-htmlwidgets.
322s Preparing to unpack .../281-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ...
322s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ...
322s Selecting previously unselected package r-cran-rstudioapi.
322s Preparing to unpack .../282-r-cran-rstudioapi_0.18.0-1_all.deb ...
322s Unpacking r-cran-rstudioapi (0.18.0-1) ...
322s Selecting previously unselected package r-cran-htmltable.
322s Preparing to unpack .../283-r-cran-htmltable_2.4.3-1_all.deb ...
322s Unpacking r-cran-htmltable (2.4.3-1) ...
322s Selecting previously unselected package r-cran-colorspace.
322s Preparing to unpack .../284-r-cran-colorspace_2.1-1+dfsg-1_amd64.deb ...
322s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ...
322s Selecting previously unselected package r-cran-formula.
322s Preparing to unpack .../285-r-cran-formula_1.2-5-1_all.deb ...
322s Unpacking r-cran-formula (1.2-5-1) ...
322s Selecting previously unselected package r-cran-chron.
322s Preparing to unpack .../286-r-cran-chron_2.3-62-1_amd64.deb ...
322s Unpacking r-cran-chron (2.3-62-1) ...
322s Selecting previously unselected package r-cran-jpeg.
322s Preparing to unpack .../287-r-cran-jpeg_0.1-10-1_amd64.deb ...
322s Unpacking r-cran-jpeg (0.1-10-1) ...
322s Selecting previously unselected package r-cran-deldir.
322s Preparing to unpack .../288-r-cran-deldir_2.0-4-1build1_amd64.deb ...
322s Unpacking r-cran-deldir (2.0-4-1build1) ...
322s Selecting previously unselected package r-cran-rcppeigen.
322s Preparing to unpack .../289-r-cran-rcppeigen_0.3.4.0.2-1_amd64.deb ...
322s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ...
322s Selecting previously unselected package r-cran-interp.
322s Preparing to unpack .../290-r-cran-interp_1.1-6-1_amd64.deb ...
322s Unpacking r-cran-interp (1.1-6-1) ...
322s Selecting previously unselected package r-cran-latticeextra.
322s Preparing to unpack .../291-r-cran-latticeextra_0.6-31-1_all.deb ...
322s Unpacking r-cran-latticeextra (0.6-31-1) ...
322s Selecting previously unselected package r-cran-acepack.
322s Preparing to unpack .../292-r-cran-acepack_1.6.3-1_amd64.deb ...
322s Unpacking r-cran-acepack (1.6.3-1) ...
322s Selecting previously unselected package r-cran-viridis.
322s Preparing to unpack .../293-r-cran-viridis_0.6.5-1_all.deb ...
322s Unpacking r-cran-viridis (0.6.5-1) ...
322s Selecting previously unselected package r-cran-hmisc.
322s Preparing to unpack .../294-r-cran-hmisc_5.2-5-2_amd64.deb ...
322s Unpacking r-cran-hmisc (5.2-5-2) ...
322s Selecting previously unselected package r-cran-dichromat.
322s Preparing to unpack .../295-r-cran-dichromat_1%3a2.0-0.1-1_all.deb ...
322s Unpacking r-cran-dichromat (1:2.0-0.1-1) ...
322s Selecting previously unselected package r-cran-matrixstats.
322s Preparing to unpack .../296-r-cran-matrixstats_1.5.0-1_amd64.deb ...
322s Unpacking r-cran-matrixstats (1.5.0-1) ...
322s Selecting previously unselected package r-bioc-matrixgenerics.
322s Preparing to unpack .../297-r-bioc-matrixgenerics_1.18.1-1_all.deb ...
322s Unpacking r-bioc-matrixgenerics (1.18.1-1) ...
322s Selecting previously unselected package r-cran-abind.
322s Preparing to unpack .../298-r-cran-abind_1.4-8-1build1_all.deb ...
322s Unpacking r-cran-abind (1.4-8-1build1) ...
322s Selecting previously unselected package r-bioc-s4arrays.
322s Preparing to unpack .../299-r-bioc-s4arrays_1.6.0+dfsg-2_amd64.deb ...
322s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ...
322s Selecting previously unselected package r-bioc-sparsearray.
322s Preparing to unpack .../300-r-bioc-sparsearray_1.6.2+dfsg-2_amd64.deb ...
322s Unpacking r-bioc-sparsearray (1.6.2+dfsg-2) ...
322s Selecting previously unselected package r-bioc-delayedarray.
322s Preparing to unpack .../301-r-bioc-delayedarray_0.32.0+dfsg-2_amd64.deb ...
322s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ...
322s Selecting previously unselected package r-bioc-summarizedexperiment.
322s Preparing to unpack .../302-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ...
322s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ...
322s Selecting previously unselected package r-cran-bitops.
322s Preparing to unpack .../303-r-cran-bitops_1.0-9-1_amd64.deb ...
322s Unpacking r-cran-bitops (1.0-9-1) ...
322s Selecting previously unselected package r-bioc-rhtslib.
322s Preparing to unpack .../304-r-bioc-rhtslib_3.2.0+dfsg-2_amd64.deb ...
322s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ...
322s Selecting previously unselected package r-bioc-rsamtools.
322s Preparing to unpack .../305-r-bioc-rsamtools_2.22.0+dfsg-2_amd64.deb ...
322s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ...
322s Selecting previously unselected package r-bioc-genomicalignments.
322s Preparing to unpack .../306-r-bioc-genomicalignments_1.42.0-2_amd64.deb ...
322s Unpacking r-bioc-genomicalignments (1.42.0-2) ...
322s Selecting previously unselected package r-cran-xml.
322s Preparing to unpack .../307-r-cran-xml_3.99-0.20-1_amd64.deb ...
322s Unpacking r-cran-xml (3.99-0.20-1) ...
322s Selecting previously unselected package r-cran-rcurl.
322s Preparing to unpack .../308-r-cran-rcurl_1.98-1.16+dfsg-1_amd64.deb ...
322s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ...
322s Selecting previously unselected package r-cran-rjson.
322s Preparing to unpack .../309-r-cran-rjson_0.2.23-1_amd64.deb ...
322s Unpacking r-cran-rjson (0.2.23-1) ...
322s Selecting previously unselected package r-cran-restfulr.
322s Preparing to unpack .../310-r-cran-restfulr_0.0.15-1_amd64.deb ...
322s Unpacking r-cran-restfulr (0.0.15-1) ...
322s Selecting previously unselected package r-bioc-rtracklayer.
322s Preparing to unpack .../311-r-bioc-rtracklayer_1.66.0-3_amd64.deb ...
322s Unpacking r-bioc-rtracklayer (1.66.0-3) ...
322s Selecting previously unselected package r-bioc-genomicfeatures.
322s Preparing to unpack .../312-r-bioc-genomicfeatures_1.58.0+dfsg-2_all.deb ...
322s Unpacking r-bioc-genomicfeatures (1.58.0+dfsg-2) ...
322s Selecting previously unselected package r-bioc-bsgenome.
323s Preparing to unpack .../313-r-bioc-bsgenome_1.74.0-2_all.deb ...
323s Unpacking r-bioc-bsgenome (1.74.0-2) ...
323s Selecting previously unselected package r-bioc-variantannotation.
323s Preparing to unpack .../314-r-bioc-variantannotation_1.52.0-2_amd64.deb ...
323s Unpacking r-bioc-variantannotation (1.52.0-2) ...
323s Selecting previously unselected package r-bioc-protgenerics.
323s Preparing to unpack .../315-r-bioc-protgenerics_1.38.0-2_all.deb ...
323s Unpacking r-bioc-protgenerics (1.38.0-2) ...
323s Selecting previously unselected package r-bioc-ensembldb.
323s Preparing to unpack .../316-r-bioc-ensembldb_2.30.0+dfsg-3_all.deb ...
323s Unpacking r-bioc-ensembldb (2.30.0+dfsg-3) ...
323s Selecting previously unselected package r-bioc-biovizbase.
323s Preparing to unpack .../317-r-bioc-biovizbase_1.54.0-2_amd64.deb ...
323s Unpacking r-bioc-biovizbase (1.54.0-2) ...
323s Selecting previously unselected package r-bioc-gviz.
323s Preparing to unpack .../318-r-bioc-gviz_1.50.0+dfsg-2_all.deb ...
323s Unpacking r-bioc-gviz (1.50.0+dfsg-2) ...
323s Selecting previously unselected package r-cran-brio.
323s Preparing to unpack .../319-r-cran-brio_1.1.5-1_amd64.deb ...
323s Unpacking r-cran-brio (1.1.5-1) ...
323s Selecting previously unselected package r-cran-ps.
323s Preparing to unpack .../320-r-cran-ps_1.9.0-1_amd64.deb ...
323s Unpacking r-cran-ps (1.9.0-1) ...
323s Selecting previously unselected package r-cran-processx.
323s Preparing to unpack .../321-r-cran-processx_3.8.6-1_amd64.deb ...
323s Unpacking r-cran-processx (3.8.6-1) ...
323s Selecting previously unselected package r-cran-callr.
323s Preparing to unpack .../322-r-cran-callr_3.7.6-1_all.deb ...
323s Unpacking r-cran-callr (3.7.6-1) ...
323s Selecting previously unselected package r-cran-desc.
323s Preparing to unpack .../323-r-cran-desc_1.4.3-1_all.deb ...
323s Unpacking r-cran-desc (1.4.3-1) ...
323s Selecting previously unselected package r-cran-diffobj.
323s Preparing to unpack .../324-r-cran-diffobj_0.3.5-1build1_amd64.deb ...
323s Unpacking r-cran-diffobj (0.3.5-1build1) ...
323s Selecting previously unselected package r-cran-pkgbuild.
323s Preparing to unpack .../325-r-cran-pkgbuild_1.4.8-1_all.deb ...
323s Unpacking r-cran-pkgbuild (1.4.8-1) ...
323s Selecting previously unselected package r-cran-rprojroot.
323s Preparing to unpack .../326-r-cran-rprojroot_2.1.1-1_all.deb ...
323s Unpacking r-cran-rprojroot (2.1.1-1) ...
323s Selecting previously unselected package r-cran-pkgload.
323s Preparing to unpack .../327-r-cran-pkgload_1.4.1-1_all.deb ...
323s Unpacking r-cran-pkgload (1.4.1-1) ...
323s Selecting previously unselected package r-cran-praise.
323s Preparing to unpack .../328-r-cran-praise_1.0.0-4build2_all.deb ...
323s Unpacking r-cran-praise (1.0.0-4build2) ...
323s Selecting previously unselected package r-cran-waldo.
323s Preparing to unpack .../329-r-cran-waldo_0.6.2-1_all.deb ...
323s Unpacking r-cran-waldo (0.6.2-1) ...
323s Selecting previously unselected package r-cran-testthat.
323s Preparing to unpack .../330-r-cran-testthat_3.2.3-1_amd64.deb ...
323s Unpacking r-cran-testthat (3.2.3-1) ...
323s Setting up libjs-json (0~20221030+~1.0.8-1build1) ...
323s Setting up javascript-common (12+nmu1build1) ...
323s Setting up libgraphite2-3:amd64 (1.3.14-11ubuntu1) ...
323s Setting up libpixman-1-0:amd64 (0.46.4-1) ...
323s Setting up libsharpyuv0:amd64 (1.5.0-0.1build1) ...
323s Setting up fonts-mathjax (2.7.9+dfsg-1build1) ...
323s Setting up liblerc4:amd64 (4.0.0+ds-5ubuntu2) ...
323s Setting up libzstd-dev:amd64 (1.5.7+dfsg-3) ...
323s Setting up libxpm4:amd64 (1:3.5.17-1build3) ...
323s Setting up libjs-mathjax (2.7.9+dfsg-1build1) ...
323s Setting up libxi6:amd64 (2:1.8.2-2) ...
323s Setting up libxrender1:amd64 (1:0.9.12-1) ...
323s Setting up libdatrie1:amd64 (0.2.14-1) ...
323s Setting up libjs-popper.js (1.16.1+ds-6build1) ...
323s Setting up libxcb-render0:amd64 (1.17.0-2ubuntu1) ...
323s Setting up libjs-sifter.js (0.6.0+dfsg-3) ...
323s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ...
323s Setting up libjs-lunr (2.3.9~dfsg-2) ...
323s Setting up unzip (6.0-29ubuntu1) ...
323s Setting up liblatex-tounicode-perl (1.93-1) ...
323s Setting up x11-common (1:7.7+24ubuntu1) ...
324s Setting up node-html5shiv (3.7.3+dfsg-5) ...
324s Setting up libdeflate0:amd64 (1.23-2build1) ...
324s Setting up linux-libc-dev:amd64 (6.19.0-3.3) ...
324s Setting up libjs-microplugin.js (0.0.3+dfsg-2) ...
324s Setting up libxcb-shm0:amd64 (1.17.0-2ubuntu1) ...
324s Setting up libgomp1:amd64 (16-20260208-1ubuntu1) ...
324s Setting up libjs-modernizr (3.13.0-0.1build1) ...
324s Setting up libjbig0:amd64 (2.1-6.1ubuntu3) ...
324s Setting up libpcre2-16-0:amd64 (10.46-1) ...
324s Setting up libjs-es5-shim (4.6.7-2) ...
324s Setting up tex-common (6.20) ...
324s update-language: texlive-base not installed and configured, doing nothing!
324s Setting up libio-string-perl (1.08-4) ...
324s Setting up zip (3.0-15ubuntu3) ...
324s Setting up libpcre2-32-0:amd64 (10.46-1) ...
324s Setting up libblas3:amd64 (3.12.1-7ubuntu1) ...
324s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
324s Setting up libtirpc-dev:amd64 (1.3.6+ds-1) ...
324s Setting up libpkgconf3:amd64 (1.8.1-4build1) ...
324s Setting up rpcsvc-proto (1.4.3-1build1) ...
324s Setting up libzzip-0-13t64:amd64 (0.13.78+dfsg.1-0.2) ...
324s Setting up libteckit0:amd64 (2.5.13+ds-1) ...
324s Setting up t1utils (1.41-4build4) ...
324s Setting up libquadmath0:amd64 (16-20260208-1ubuntu1) ...
324s Setting up libtexlua53-5:amd64 (2025.20250727.75242+ds-5build1) ...
324s Setting up libjs-d3 (3.5.17-4build1) ...
324s Setting up fonts-dejavu-mono (2.37-8build1) ...
324s Setting up libmpc3:amd64 (1.3.1-2) ...
324s Setting up libtcl8.6:amd64 (8.6.17+dfsg-1build1) ...
324s Setting up libmpfi0:amd64 (1.5.4+ds-4build1) ...
324s Setting up icu-devtools (78.2-1ubuntu1) ...
324s Setting up fonts-dejavu-core (2.37-8build1) ...
324s Setting up pkgconf-bin (1.8.1-4build1) ...
324s Setting up libjpeg-turbo8:amd64 (2.1.5-4ubuntu3) ...
324s Setting up libkpathsea6:amd64 (2025.20250727.75242+ds-5build1) ...
324s Setting up libgfortran5:amd64 (16-20260208-1ubuntu1) ...
324s Setting up libwebp7:amd64 (1.5.0-0.1build1) ...
324s Setting up liblzma-dev:amd64 (5.8.2-2) ...
324s Setting up libubsan1:amd64 (16-20260208-1ubuntu1) ...
324s Setting up libpcre2-posix3:amd64 (10.46-1) ...
324s Setting up libjs-highlight.js (10.7.3+dfsg-2) ...
324s Setting up libhwasan0:amd64 (16-20260208-1ubuntu1) ...
324s Setting up libcrypt-dev:amd64 (1:4.5.1-1) ...
324s Setting up libasan8:amd64 (16-20260208-1ubuntu1) ...
324s Setting up fonts-lmodern (2.005-1build1) ...
324s Setting up liblua5.4-0:amd64 (5.4.8-1) ...
324s Setting up libharfbuzz0b:amd64 (12.3.2-1) ...
324s Setting up libthai-data (0.1.30-1) ...
324s Setting up node-bootstrap-sass (3.4.3-2) ...
324s Setting up libjs-prettify (2015.12.04+dfsg-3) ...
324s Setting up libxss1:amd64 (1:1.2.3-1build4) ...
324s Setting up libjs-bootstrap4 (4.6.2+dfsg-1) ...
324s Setting up libpaper2:amd64 (2.2.5-0.3build1) ...
324s Setting up pandoc-data (3.1.11.1-3build1) ...
324s Setting up libtsan2:amd64 (16-20260208-1ubuntu1) ...
324s Setting up libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ...
324s Setting up libisl23:amd64 (0.27-1build1) ...
324s Setting up libc-dev-bin (2.42-2ubuntu4) ...
324s Setting up libdeflate-dev:amd64 (1.23-2build1) ...
324s Setting up node-normalize.css (8.0.1-5.1) ...
324s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ...
324s Setting up xdg-utils (1.2.1-2ubuntu2) ...
324s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
324s Setting up libcc1-0:amd64 (16-20260208-1ubuntu1) ...
324s Setting up liblsan0:amd64 (16-20260208-1ubuntu1) ...
324s Setting up libblas-dev:amd64 (3.12.1-7ubuntu1) ...
324s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode
324s Setting up dctrl-tools (2.24-3build4) ...
324s Setting up libjs-bootstrap (3.4.1+dfsg-6) ...
324s Setting up libitm1:amd64 (16-20260208-1ubuntu1) ...
324s Setting up libsynctex2:amd64 (2025.20250727.75242+ds-5build1) ...
324s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ...
324s Setting up libpotrace0:amd64 (1.16-2build2) ...
324s Setting up libjpeg8:amd64 (8c-2ubuntu12) ...
324s Setting up libice6:amd64 (2:1.1.1-1build1) ...
324s Setting up liblapack3:amd64 (3.12.1-7ubuntu1) ...
324s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
324s Setting up libgcc-15-dev:amd64 (15.2.0-12ubuntu1) ...
324s Setting up fontconfig-config (2.17.1-3ubuntu1) ...
324s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ...
324s Setting up libpaper-utils (2.2.5-0.3build1) ...
324s Setting up cpp-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
324s Setting up libbibtex-parser-perl (1.93+dfsg-1) ...
324s Setting up libgfortran-15-dev:amd64 (15.2.0-12ubuntu1) ...
324s Setting up libjs-jquery-datatables (1.11.5+dfsg-2build1) ...
324s Setting up pkgconf:amd64 (1.8.1-4build1) ...
324s Setting up gcc-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
324s Setting up libthai0:amd64 (0.1.30-1) ...
324s Setting up libjs-jquery-ui (1.13.2+dfsg-1build1) ...
324s Setting up libptexenc1:amd64 (2025.20250727.75242+ds-5build1) ...
324s Setting up pandoc (3.1.11.1+ds-4) ...
324s Setting up liblapack-dev:amd64 (3.12.1-7ubuntu1) ...
324s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode
324s Setting up cpp-15 (15.2.0-12ubuntu1) ...
324s Setting up libtiff6:amd64 (4.7.0-3ubuntu3) ...
324s Setting up libc6-dev:amd64 (2.42-2ubuntu4) ...
324s Setting up libfontconfig1:amd64 (2.17.1-3ubuntu1) ...
324s Setting up libsm6:amd64 (2:1.2.6-1build1) ...
324s Setting up libicu-dev:amd64 (78.2-1ubuntu1) ...
324s Setting up libbz2-dev:amd64 (1.0.8-6build2) ...
324s Setting up cpp-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
324s Setting up gfortran-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
324s Setting up fontconfig (2.17.1-3ubuntu1) ...
326s Regenerating fonts cache... done.
326s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-4ubuntu3) ...
326s Setting up libxft2:amd64 (2.3.6-1build2) ...
326s Setting up libncurses-dev:amd64 (6.6+20251231-1) ...
326s Setting up libpcre2-dev:amd64 (10.46-1) ...
326s Setting up gcc-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
326s Setting up libtk8.6:amd64 (8.6.17-1) ...
326s Setting up libpango-1.0-0:amd64 (1.57.0-1) ...
326s Setting up libreadline-dev:amd64 (8.3-3) ...
326s Setting up gfortran-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
326s Setting up libcairo2:amd64 (1.18.4-3) ...
326s Setting up gcc-15 (15.2.0-12ubuntu1) ...
326s Setting up libstdc++-15-dev:amd64 (15.2.0-12ubuntu1) ...
326s Setting up libxt6t64:amd64 (1:1.2.1-1.3) ...
326s Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ...
326s Setting up cpp (4:15.2.0-4ubuntu1) ...
326s Setting up libboost1.90-dev:amd64 (1.90.0-2ubuntu1) ...
326s Setting up libboost-dev:amd64 (1.90.0.0ubuntu3) ...
326s Setting up libpangoft2-1.0-0:amd64 (1.57.0-1) ...
326s Setting up libjpeg8-dev:amd64 (8c-2ubuntu12) ...
326s Setting up gfortran-15 (15.2.0-12ubuntu1) ...
326s Setting up libpangocairo-1.0-0:amd64 (1.57.0-1) ...
326s Setting up g++-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
326s Setting up libxmu6:amd64 (2:1.1.3-4) ...
326s Setting up libpng-dev:amd64 (1.6.54-1) ...
326s Setting up libjpeg-dev:amd64 (8c-2ubuntu12) ...
326s Setting up libxaw7:amd64 (2:1.0.16-1build1) ...
326s Setting up gcc (4:15.2.0-4ubuntu1) ...
326s Setting up r-base-core (4.5.2-1ubuntu2) ...
326s Creating config file /etc/R/Renviron with new version
326s Setting up r-cran-crayon (1.5.3-1) ...
326s Setting up r-cran-labeling (0.4.3-1) ...
326s Setting up r-cran-sourcetools (0.1.7-1-1) ...
326s Setting up r-cran-futile.options (1.0.1-3build2) ...
326s Setting up r-cran-lattice (0.22-9-1) ...
326s Setting up r-cran-ps (1.9.0-1) ...
326s Setting up r-cran-nlme (3.1.168-1) ...
326s Setting up r-cran-farver (2.1.2-1) ...
326s Setting up r-cran-formatr (1.14-2) ...
326s Setting up r-cran-formula (1.2-5-1) ...
326s Setting up r-cran-xml (3.99-0.20-1) ...
326s Setting up r-cran-viridislite (0.4.3-1) ...
326s Setting up texlive-binaries (2025.20250727.75242+ds-5build1) ...
326s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
326s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
326s Setting up r-cran-cluster (2.1.8.2-1) ...
326s Setting up g++-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
326s Setting up r-cran-nnet (7.3-20-1) ...
326s Setting up r-cran-lazyeval (0.2.2-1build2) ...
326s Setting up r-cran-commonmark (1.9.5-1) ...
326s Setting up r-cran-rjson (0.2.23-1) ...
326s Setting up r-cran-r6 (2.6.1-1) ...
326s Setting up r-cran-pkgkitten (0.2.4-1) ...
326s Setting up r-cran-jpeg (0.1-10-1) ...
326s Setting up r-cran-chron (2.3-62-1) ...
326s Setting up texlive-base (2025.20260124-1) ...
327s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
327s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
327s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
327s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex
327s Setting up g++-15 (15.2.0-12ubuntu1) ...
327s Setting up r-cran-magrittr (2.0.3-1) ...
327s Setting up r-cran-rappdirs (0.3.3-1build1) ...
327s Setting up r-cran-filelock (1.0.3-1) ...
327s Setting up r-bioc-genomeinfodbdata (1.2.13-2) ...
328s Setting up r-cran-littler (0.3.22-1) ...
328s Setting up r-cran-bh (1.84.0-1) ...
328s Setting up r-cran-fs (1.6.5+dfsg-1) ...
328s Setting up r-cran-rcpp (1.1.0-1) ...
328s Setting up r-cran-curl (7.0.0+dfsg-1) ...
328s Setting up r-cran-codetools (0.2-20-1build1) ...
328s Setting up r-cran-brio (1.1.5-1) ...
328s Setting up r-cran-diffobj (0.3.5-1build1) ...
328s Setting up r-bioc-biocgenerics (0.52.0-2) ...
328s Setting up r-cran-rlang (1.1.5-3) ...
328s Setting up r-cran-matrixstats (1.5.0-1) ...
328s Setting up r-bioc-matrixgenerics (1.18.1-1) ...
328s Setting up r-cran-xfun (0.55+dfsg-1) ...
328s Setting up r-cran-sys (3.4.3-1) ...
328s Setting up r-cran-plogr (0.2.0-3build2) ...
328s Setting up r-cran-withr (3.0.2+dfsg-1) ...
328s Setting up r-cran-backports (1.5.0-2) ...
328s Setting up r-cran-processx (3.8.6-1) ...
328s Setting up r-cran-mime (0.12-2) ...
328s Setting up r-cran-praise (1.0.0-4build2) ...
328s Setting up r-cran-generics (0.1.4-1) ...
328s Setting up r-cran-base64enc (0.1-3-3build1) ...
328s Setting up r-cran-abind (1.4-8-1build1) ...
328s Setting up r-cran-digest (0.6.39-1) ...
328s Setting up r-cran-yaml (2.3.10-1) ...
328s Setting up r-cran-lambda.r (1.2.4-2build2) ...
328s Setting up r-bioc-protgenerics (1.38.0-2) ...
328s Setting up r-cran-evaluate (1.0.5-1) ...
328s Setting up r-cran-dbi (1.2.3-1build1) ...
328s Setting up r-cran-highr (0.11+dfsg-1) ...
328s Setting up r-cran-prettyunits (1.2.0-1) ...
328s Setting up r-cran-fansi (1.0.6-2) ...
328s Setting up r-cran-mass (7.3-65-1) ...
328s Setting up r-cran-checkmate (2.3.2-1) ...
328s Setting up r-cran-acepack (1.6.3-1) ...
328s Setting up r-cran-snow (1:0.4.4-2build1) ...
328s Setting up r-cran-data.table (1.17.0+dfsg-1) ...
328s Setting up r-cran-glue (1.8.0-1) ...
328s Setting up r-cran-foreign (0.8.91-1) ...
328s Setting up r-cran-bit (4.6.0+dfsg-1) ...
328s Setting up r-cran-xtable (1:1.8-4-2build1) ...
328s Setting up r-cran-cli (3.6.4-1) ...
328s Setting up gfortran (4:15.2.0-4ubuntu1) ...
328s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
328s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
328s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
328s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
328s Setting up r-cran-lifecycle (1.0.5+dfsg-1) ...
328s Setting up r-cran-bitops (1.0-9-1) ...
328s Setting up r-bioc-biocversion (3.20.0-2) ...
328s Setting up r-cran-rprojroot (2.1.1-1) ...
328s Setting up r-cran-bit64 (4.6.0-1-4) ...
328s Setting up r-cran-biocmanager (1.30.25+dfsg-1) ...
328s Setting up r-cran-dichromat (1:2.0-0.1-1) ...
328s Setting up r-bioc-zlibbioc (1.52.0+dfsg-2) ...
328s Setting up r-cran-deldir (2.0-4-1build1) ...
328s Setting up r-cran-askpass (1.2.1-1) ...
328s Setting up r-cran-fastmap (1.2.0-1) ...
328s Setting up r-cran-png (0.1-8-1build2) ...
328s Setting up r-bioc-biobase (2.66.0-2) ...
328s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ...
328s Setting up r-cran-rstudioapi (0.18.0-1) ...
328s Setting up r-cran-pkgconfig (2.0.3-2build2) ...
328s Setting up r-cran-utf8 (1.2.4-1) ...
328s Setting up r-cran-colorspace (2.1-1+dfsg-1) ...
328s Setting up r-cran-stringi (1.8.4-1build2) ...
328s Setting up texlive-latex-base (2025.20260124-1) ...
328s Setting up r-cran-cpp11 (0.5.3-1) ...
328s Setting up r-cran-rcolorbrewer (1.1-3-1build2) ...
328s Setting up r-bioc-s4vectors (0.44.0+dfsg-2) ...
328s Setting up r-cran-isoband (0.2.7-1) ...
328s Setting up r-cran-futile.logger (1.4.3-4build2) ...
328s Setting up r-cran-waldo (0.6.2-1) ...
328s Setting up r-cran-scales (1.4.0-1) ...
328s Setting up r-cran-gtable (0.3.6+dfsg-1) ...
328s Setting up r-cran-later (1.4.1+dfsg-1) ...
328s Setting up r-cran-matrix (1.7-4-1) ...
328s Setting up r-cran-htmltools (0.5.8.1-1) ...
328s Setting up r-cran-tinytex (0.58-1) ...
328s Setting up r-cran-knitr (1.51+dfsg-1) ...
328s Setting up r-cran-mgcv (1.9-4-1) ...
328s Setting up g++ (4:15.2.0-4ubuntu1) ...
328s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
328s Setting up r-cran-cachem (1.1.0-1) ...
328s Setting up r-cran-sass (0.4.9+dfsg-1) ...
328s Setting up build-essential (12.12ubuntu2) ...
328s Setting up r-bioc-iranges (2.40.1-3) ...
328s Setting up r-cran-rcurl (1.98-1.16+dfsg-1) ...
328s Setting up r-cran-restfulr (0.0.15-1) ...
328s Setting up r-cran-vctrs (0.6.5-1) ...
328s Setting up r-cran-rcppeigen (0.3.4.0.2-1) ...
328s Setting up r-cran-pillar (1.11.1+dfsg-1) ...
328s Setting up r-cran-openssl (2.3.2+dfsg-1) ...
328s Setting up r-base-dev (4.5.2-1ubuntu2) ...
328s Setting up r-bioc-s4arrays (1.6.0+dfsg-2) ...
328s Setting up r-cran-stringr (1.5.1-1) ...
328s Setting up r-bioc-biocparallel (1.40.0-2) ...
328s Setting up r-cran-callr (3.7.6-1) ...
328s Setting up r-bioc-rhtslib (3.2.0+dfsg-2) ...
328s Setting up r-cran-desc (1.4.3-1) ...
328s Setting up r-cran-xml2 (1.4.1-1) ...
328s Setting up r-cran-tibble (3.2.1+dfsg-3) ...
328s Setting up r-cran-fontawesome (0.5.3-1) ...
328s Setting up r-cran-survival (3.8-6-1) ...
328s Setting up r-bioc-biocio (1.16.0+dfsg-2) ...
328s Setting up r-cran-jquerylib (0.1.4+dfsg-5) ...
328s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ...
328s Setting up texlive-bibtex-extra (2025.20260124-1) ...
328s Setting up r-cran-interp (1.1-6-1) ...
328s Setting up r-cran-httr2 (1.1.1-2) ...
328s Setting up r-cran-httr (1.4.7+dfsg-1) ...
328s Setting up r-cran-gridextra (2.3-3build2) ...
328s Setting up r-cran-hms (1.1.4-1) ...
328s Setting up r-cran-memoise (2.0.1-1build1) ...
328s Setting up r-cran-promises (1.3.2+dfsg-1) ...
328s Setting up r-cran-purrr (1.0.4-1) ...
328s Setting up r-cran-blob (1.3.0-1) ...
328s Setting up pkg-r-autopkgtest (20250812) ...
328s Setting up r-bioc-xvector (0.46.0-2) ...
328s Setting up r-cran-pkgbuild (1.4.8-1) ...
328s Setting up r-cran-dplyr (1.1.4-4) ...
328s Setting up r-cran-rsqlite (2.3.9-1) ...
328s Setting up r-cran-progress (1.2.3-1) ...
328s Setting up r-cran-pkgload (1.4.1-1) ...
328s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ...
328s Setting up r-bioc-sparsearray (1.6.2+dfsg-2) ...
328s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ...
328s Setting up r-cran-httpuv (1.6.15+dfsg-1) ...
328s Setting up r-cran-rpart (4.1.24-1build1) ...
328s Setting up r-cran-latticeextra (0.6-31-1) ...
328s Setting up r-cran-viridis (0.6.5-1) ...
328s Setting up r-cran-testthat (3.2.3-1) ...
328s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ...
328s Setting up r-cran-bslib (0.9.0+dfsg-3build1) ...
328s Setting up r-cran-tidyr (1.3.1-1) ...
328s Setting up r-cran-dbplyr (2.5.1+dfsg-1) ...
328s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ...
328s Setting up r-bioc-biocfilecache (2.14.0+dfsg-2) ...
328s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ...
328s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ...
328s Setting up r-bioc-annotationfilter (1.30.0+dfsg-2) ...
328s Setting up r-cran-shiny (1.10.0+dfsg-2) ...
328s Setting up r-cran-rmarkdown (2.30+dfsg-1) ...
328s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ...
328s Setting up r-cran-bookdown (0.42+dfsg-1) ...
328s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ...
328s Setting up r-bioc-keggrest (1.46.0+dfsg-3) ...
328s Setting up r-bioc-annotationdbi (1.68.0-2) ...
328s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ...
328s Setting up r-bioc-biomart (2.62.1+dfsg-1) ...
328s Setting up r-bioc-biocstyle (2.34.0+dfsg-1) ...
328s Setting up r-bioc-genomicalignments (1.42.0-2) ...
328s Setting up r-bioc-rtracklayer (1.66.0-3) ...
328s Setting up r-bioc-genomicfeatures (1.58.0+dfsg-2) ...
328s Setting up r-cran-htmltable (2.4.3-1) ...
328s Setting up r-bioc-bsgenome (1.74.0-2) ...
328s Setting up r-bioc-ensembldb (2.30.0+dfsg-3) ...
328s Setting up r-cran-hmisc (5.2-5-2) ...
328s Setting up r-bioc-variantannotation (1.52.0-2) ...
328s Setting up r-bioc-biovizbase (1.54.0-2) ...
328s Setting up r-bioc-gviz (1.50.0+dfsg-2) ...
328s Processing triggers for libc-bin (2.42-2ubuntu4) ...
328s Processing triggers for man-db (2.13.1-1build1) ...
329s Processing triggers for install-info (7.2-5) ...
329s Processing triggers for tex-common (6.20) ...
329s Running updmap-sys. This may take some time... done.
329s Running mktexlsr /var/lib/texmf ... done.
329s Building format(s) --all.
345s 	This may take some time... done.
346s autopkgtest [01:49:03]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
346s autopkgtest [01:49:03]: test pkg-r-autopkgtest: [-----------------------
346s Test: Try to load the R library Gviz
346s 
346s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
346s Copyright (C) 2025 The R Foundation for Statistical Computing
346s Platform: x86_64-pc-linux-gnu
346s 
346s R is free software and comes with ABSOLUTELY NO WARRANTY.
346s You are welcome to redistribute it under certain conditions.
346s Type 'license()' or 'licence()' for distribution details.
346s 
346s R is a collaborative project with many contributors.
346s Type 'contributors()' for more information and
346s 'citation()' on how to cite R or R packages in publications.
346s 
346s Type 'demo()' for some demos, 'help()' for on-line help, or
346s 'help.start()' for an HTML browser interface to help.
346s Type 'q()' to quit R.
346s 
346s > library('Gviz')
346s Loading required package: S4Vectors
346s Loading required package: stats4
346s Loading required package: BiocGenerics
346s 
346s Attaching package: ‘BiocGenerics’
346s 
346s The following objects are masked from ‘package:stats’:
346s 
346s     IQR, mad, sd, var, xtabs
346s 
346s The following objects are masked from ‘package:base’:
346s 
346s     anyDuplicated, aperm, append, as.data.frame, basename, cbind,
346s     colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find,
346s     get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply,
346s     match, mget, order, paste, pmax, pmax.int, pmin, pmin.int,
346s     Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff,
346s     table, tapply, union, unique, unsplit, which.max, which.min
346s 
347s 
347s Attaching package: ‘S4Vectors’
347s 
347s The following object is masked from ‘package:utils’:
347s 
347s     findMatches
347s 
347s The following objects are masked from ‘package:base’:
347s 
347s     expand.grid, I, unname
347s 
347s Loading required package: IRanges
347s Loading required package: GenomicRanges
347s Loading required package: GenomeInfoDb
348s Loading required package: grid
356s > 
356s Test: Run tests for Gviz
356s Start: testthat.R
356s 
356s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
356s Copyright (C) 2025 The R Foundation for Statistical Computing
356s Platform: x86_64-pc-linux-gnu
356s 
356s R is free software and comes with ABSOLUTELY NO WARRANTY.
356s You are welcome to redistribute it under certain conditions.
356s Type 'license()' or 'licence()' for distribution details.
356s 
356s R is a collaborative project with many contributors.
356s Type 'contributors()' for more information and
356s 'citation()' on how to cite R or R packages in publications.
356s 
356s Type 'demo()' for some demos, 'help()' for on-line help, or
356s 'help.start()' for an HTML browser interface to help.
356s Type 'q()' to quit R.
356s 
356s > library(testthat)
356s > library(Gviz)
356s Loading required package: S4Vectors
356s Loading required package: stats4
356s Loading required package: BiocGenerics
357s 
357s Attaching package: ‘BiocGenerics’
357s 
357s The following objects are masked from ‘package:stats’:
357s 
357s     IQR, mad, sd, var, xtabs
357s 
357s The following objects are masked from ‘package:base’:
357s 
357s     anyDuplicated, aperm, append, as.data.frame, basename, cbind,
357s     colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find,
357s     get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply,
357s     match, mget, order, paste, pmax, pmax.int, pmin, pmin.int,
357s     Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff,
357s     table, tapply, union, unique, unsplit, which.max, which.min
357s 
357s 
357s Attaching package: ‘S4Vectors’
357s 
357s The following object is masked from ‘package:utils’:
357s 
357s     findMatches
357s 
357s The following objects are masked from ‘package:base’:
357s 
357s     expand.grid, I, unname
357s 
357s Loading required package: IRanges
357s Loading required package: GenomicRanges
357s Loading required package: GenomeInfoDb
358s Loading required package: grid
366s > 
366s > test_check("Gviz")
366s Loading required package: BSgenome.Hsapiens.UCSC.hg19
366s [1] "BSgenome.Hsapiens.UCSC.hg19 is not available!"
366s Warning message:
366s In library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE,  :
366s   there is no package called 'BSgenome.Hsapiens.UCSC.hg19'
366s autopkgtest [01:49:23]: test pkg-r-autopkgtest: -----------------------]
367s autopkgtest [01:49:24]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
367s pkg-r-autopkgtest    PASS
367s autopkgtest [01:49:24]: @@@@@@@@@@@@@@@@@@@@ summary
367s pkg-r-autopkgtest    PASS