0s autopkgtest [04:08:49]: starting date and time: 2026-02-10 04:08:49+0000 0s autopkgtest [04:08:49]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [04:08:49]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.1zw4f6m7/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-ggplot2 --apt-upgrade r-bioc-demixt --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-ggplot2/4.0.2+dfsg-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-amd64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@sto01-8.secgroup --name adt-resolute-amd64-r-bioc-demixt-20260210-040849-juju-7f2275-prod-proposed-migration-environment-2-68ba1399-3de4-4933-9af7-bb503c9778a0 --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-autopkgtest-workers-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 3s Creating nova instance adt-resolute-amd64-r-bioc-demixt-20260210-040849-juju-7f2275-prod-proposed-migration-environment-2-68ba1399-3de4-4933-9af7-bb503c9778a0 from image adt/ubuntu-resolute-amd64-server-20260204.img (UUID fedf54b4-458b-493e-8072-6425c19717b4)... 73s autopkgtest [04:10:02]: testbed dpkg architecture: amd64 73s autopkgtest [04:10:02]: testbed apt version: 3.1.14 73s autopkgtest [04:10:02]: @@@@@@@@@@@@@@@@@@@@ test bed setup 74s autopkgtest [04:10:03]: testbed release detected to be: None 74s autopkgtest [04:10:03]: updating testbed package index (apt update) 74s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 74s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 75s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 75s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 75s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1735 kB] 75s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [31.1 kB] 75s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [181 kB] 75s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [220 kB] 75s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [268 kB] 75s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [5980 B] 75s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [120 B] 75s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [768 kB] 75s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [1791 kB] 75s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [32.6 kB] 75s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [5020 B] 75s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [26.4 kB] 75s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [996 B] 76s Fetched 5189 kB in 1s (5325 kB/s) 77s Reading package lists... 77s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 77s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 77s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 77s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 78s Reading package lists... 78s Reading package lists... 78s Building dependency tree... 78s Reading state information... 78s Calculating upgrade... 78s The following package was automatically installed and is no longer required: 78s libpython3.13 78s Use 'sudo apt autoremove' to remove it. 78s The following NEW packages will be installed: 78s gcc-16-base libpython3.14 libpython3.14-minimal libpython3.14-stdlib 78s linux-headers-6.19.0-3 linux-headers-6.19.0-3-generic 78s linux-image-6.19.0-3-generic linux-modules-6.19.0-3-generic 78s linux-tools-6.19.0-3 linux-tools-6.19.0-3-generic 78s The following packages will be upgraded: 78s 3cpio amd64-microcode apt bpftool busybox-initramfs busybox-static 78s cryptsetup-bin dash dbus dbus-bin dbus-daemon dbus-session-bus-common 78s dbus-system-bus-common dbus-user-session debianutils dmsetup dracut-install 78s ethtool findutils gir1.2-girepository-3.0 gir1.2-glib-2.0 hwdata iproute2 78s iptables less libapt-pkg7.0 libatomic1 libattr1 libbpf1 libbsd0 78s libcryptsetup12 libdbus-1-3 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common 78s libdrm2 libevent-core-2.1-7t64 libgcc-s1 libgdbm-compat4t64 libgdbm6t64 78s libgirepository-2.0-0 libglib2.0-0t64 libglib2.0-data libgpm2 libgudev-1.0-0 78s libidn2-0 libip4tc2 libip6tc2 libjansson4 libkeyutils1 liblsof0 78s libmaxminddb0 libnetfilter-conntrack3 libnpth0t64 libonig5 libpcap0.8t64 78s libpci3 libsensors-config libsensors5 libstdc++6 libusb-1.0-0 libwrap0 78s libxau6 libxkbcommon0 libxtables12 linux-generic linux-headers-generic 78s linux-headers-virtual linux-image-generic linux-image-virtual linux-perf 78s linux-tools-common linux-virtual lsof man-db mawk patch pciutils pnp.ids 78s pollinate python3-linkify-it python3-markdown-it python3-referencing sed 78s shared-mime-info tar tcpdump ubuntu-kernel-accessories ubuntu-standard wget 78s 90 upgraded, 10 newly installed, 0 to remove and 0 not upgraded. 78s Need to get 237 MB of archives. 78s After this operation, 339 MB of additional disk space will be used. 78s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 debianutils amd64 5.23.2build1 [93.3 kB] 78s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 dash amd64 0.5.12-12ubuntu3 [96.0 kB] 78s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 findutils amd64 4.10.0-3build2 [307 kB] 78s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 sed amd64 4.9-2build3 [195 kB] 78s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 tar amd64 1.35+dfsg-3.1build2 [257 kB] 78s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libattr1 amd64 1:2.5.2-3build2 [11.4 kB] 78s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-16-base amd64 16-20260208-1ubuntu1 [59.7 kB] 78s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-s1 amd64 16-20260208-1ubuntu1 [80.3 kB] 78s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libbsd0 amd64 0.12.2-2build2 [42.3 kB] 78s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 mawk amd64 1.3.4.20260129-1 [133 kB] 78s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++6 amd64 16-20260208-1ubuntu1 [844 kB] 78s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libapt-pkg7.0 amd64 3.1.15 [1151 kB] 78s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 apt amd64 3.1.15 [1479 kB] 79s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-system-bus-common all 1.16.2-2ubuntu3 [55.8 kB] 79s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-session-bus-common all 1.16.2-2ubuntu3 [54.4 kB] 79s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-user-session amd64 1.16.2-2ubuntu3 [9696 B] 79s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-daemon amd64 1.16.2-2ubuntu3 [119 kB] 79s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-bin amd64 1.16.2-2ubuntu3 [40.1 kB] 79s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus amd64 1.16.2-2ubuntu3 [24.2 kB] 79s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libdbus-1-3 amd64 1.16.2-2ubuntu3 [185 kB] 79s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libdevmapper1.02.1 amd64 2:1.02.205-2ubuntu3 [142 kB] 79s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 dmsetup amd64 2:1.02.205-2ubuntu3 [79.4 kB] 79s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 ethtool amd64 1:6.15-3build1 [318 kB] 79s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-girepository-3.0 amd64 2.87.2-2 [25.2 kB] 79s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libgirepository-2.0-0 amd64 2.87.2-2 [76.1 kB] 79s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libatomic1 amd64 16-20260208-1ubuntu1 [11.4 kB] 79s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-glib-2.0 amd64 2.87.2-2 [182 kB] 79s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-0t64 amd64 2.87.2-2 [1613 kB] 79s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libbpf1 amd64 1:1.6.2-1build1 [184 kB] 79s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 iptables amd64 1.8.11-2ubuntu3 [381 kB] 79s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libip4tc2 amd64 1.8.11-2ubuntu3 [24.2 kB] 79s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libip6tc2 amd64 1.8.11-2ubuntu3 [24.4 kB] 79s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 libnetfilter-conntrack3 amd64 1.1.1-1 [47.5 kB] 79s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 libxtables12 amd64 1.8.11-2ubuntu3 [36.6 kB] 79s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 iproute2 amd64 6.18.0-1ubuntu1 [1178 kB] 79s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 less amd64 668-1build1 [172 kB] 79s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libcryptsetup12 amd64 2:2.8.0-1ubuntu3 [283 kB] 79s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-data all 2.87.2-2 [58.2 kB] 79s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libidn2-0 amd64 2.3.8-4build1 [67.6 kB] 79s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libkeyutils1 amd64 1.6.3-6ubuntu3 [10.6 kB] 79s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-linkify-it all 2.0.3-1ubuntu3 [19.4 kB] 79s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-markdown-it all 3.0.0-3build1 [54.4 kB] 79s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 shared-mime-info amd64 2.4-5build3 [476 kB] 79s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-static amd64 1:1.37.0-7ubuntu1 [1034 kB] 79s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-common all 2.4.131-1 [9774 B] 79s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm2 amd64 2.4.131-1 [42.3 kB] 79s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm6t64 amd64 1.26-1build1 [36.5 kB] 79s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libgpm2 amd64 1.20.7-12build1 [14.4 kB] 79s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libjansson4 amd64 2.14-2build4 [33.2 kB] 79s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 lsof amd64 4.99.4+dfsg-2build2 [239 kB] 79s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsof0 amd64 4.99.4+dfsg-2build2 [56.5 kB] 79s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libmaxminddb0 amd64 1.12.2-1build2 [18.9 kB] 79s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcap0.8t64 amd64 1.10.5-2ubuntu3 [154 kB] 79s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 pciutils amd64 1:3.14.0-1build2 [95.5 kB] 79s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libpci3 amd64 1:3.14.0-1build2 [38.1 kB] 79s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors-config all 1:3.6.2-2build1 [6862 B] 79s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors5 amd64 1:3.6.2-2build1 [28.9 kB] 79s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libusb-1.0-0 amd64 2:1.0.29-2build1 [56.9 kB] 79s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libxau6 amd64 1:1.0.11-1build2 [7502 B] 79s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libxkbcommon0 amd64 1.13.1-1 [159 kB] 79s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 man-db amd64 2.13.1-1build1 [1392 kB] 79s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 tcpdump amd64 4.99.5-2ubuntu3 [477 kB] 79s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 wget amd64 1.25.0-2ubuntu4 [353 kB] 79s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-standard amd64 1.564 [13.3 kB] 79s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 3cpio amd64 0.14.0-1ubuntu1 [285 kB] 79s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 bpftool amd64 7.7.0+6.19.0-3.3 [1229 kB] 79s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-initramfs amd64 1:1.37.0-7ubuntu1 [191 kB] 79s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 cryptsetup-bin amd64 2:2.8.0-1ubuntu3 [228 kB] 79s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 dracut-install amd64 109-11ubuntu1 [45.8 kB] 79s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 hwdata all 0.394-1build1 [1566 B] 79s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 pnp.ids all 0.394-1build1 [29.6 kB] 79s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-amdgpu1 amd64 2.4.131-1 [23.2 kB] 79s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10build2 [93.1 kB] 79s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm-compat4t64 amd64 1.26-1build1 [6796 B] 79s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libgudev-1.0-0 amd64 1:238-7build1 [15.9 kB] 79s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libnpth0t64 amd64 1.8-3build1 [9302 B] 79s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libonig5 amd64 6.9.10-1build1 [174 kB] 79s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-minimal amd64 3.14.2-1 [920 kB] 79s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-stdlib amd64 3.14.2-1 [2398 kB] 79s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14 amd64 3.14.2-1 [2568 kB] 79s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 libwrap0 amd64 7.6.q-36build2 [48.5 kB] 79s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-modules-6.19.0-3-generic amd64 6.19.0-3.3 [171 MB] 81s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-6.19.0-3-generic amd64 6.19.0-3.3+1 [16.8 MB] 81s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 amd64-microcode amd64 3.20251202.1ubuntu1 [459 kB] 81s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-generic amd64 6.19.0-3.3 [1698 B] 81s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-generic amd64 6.19.0-3.3 [12.2 kB] 81s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-virtual amd64 6.19.0-3.3 [1700 B] 81s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-virtual amd64 6.19.0-3.3 [12.1 kB] 81s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-virtual amd64 6.19.0-3.3 [1646 B] 81s Get:90 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3 all 6.19.0-3.3 [14.9 MB] 82s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3-generic amd64 6.19.0-3.3 [4330 kB] 82s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-generic amd64 6.19.0-3.3 [12.0 kB] 82s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-perf amd64 6.19.0-3.3 [4480 kB] 82s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-common all 6.19.0-3.3 [345 kB] 82s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3 amd64 6.19.0-3.3 [1455 kB] 82s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3-generic amd64 6.19.0-3.3 [1612 B] 82s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 patch amd64 2.8-2build1 [95.7 kB] 82s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 pollinate all 4.33-4ubuntu5 [14.0 kB] 82s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-referencing all 0.36.2-1ubuntu2 [22.2 kB] 82s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-kernel-accessories amd64 1.564 [13.1 kB] 82s dpkg-preconfigure: unable to re-open stdin: No such file or directory 82s Fetched 237 MB in 4s (65.3 MB/s) 82s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 82s Preparing to unpack .../debianutils_5.23.2build1_amd64.deb ... 82s Unpacking debianutils (5.23.2build1) over (5.23.2) ... 82s Setting up debianutils (5.23.2build1) ... 82s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 82s Preparing to unpack .../dash_0.5.12-12ubuntu3_amd64.deb ... 82s Unpacking dash (0.5.12-12ubuntu3) over (0.5.12-12ubuntu2) ... 82s Setting up dash (0.5.12-12ubuntu3) ... 82s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 82s Preparing to unpack .../findutils_4.10.0-3build2_amd64.deb ... 82s Unpacking findutils (4.10.0-3build2) over (4.10.0-3build1) ... 83s Setting up findutils (4.10.0-3build2) ... 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 83s Preparing to unpack .../sed_4.9-2build3_amd64.deb ... 83s Unpacking sed (4.9-2build3) over (4.9-2build2) ... 83s Setting up sed (4.9-2build3) ... 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 83s Preparing to unpack .../tar_1.35+dfsg-3.1build2_amd64.deb ... 83s Unpacking tar (1.35+dfsg-3.1build2) over (1.35+dfsg-3.1build1) ... 83s Setting up tar (1.35+dfsg-3.1build2) ... 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 83s Preparing to unpack .../libattr1_1%3a2.5.2-3build2_amd64.deb ... 83s Unpacking libattr1:amd64 (1:2.5.2-3build2) over (1:2.5.2-3build1) ... 83s Setting up libattr1:amd64 (1:2.5.2-3build2) ... 83s Selecting previously unselected package gcc-16-base:amd64. 83s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83957 files and directories currently installed.) 83s Preparing to unpack .../gcc-16-base_16-20260208-1ubuntu1_amd64.deb ... 83s Unpacking gcc-16-base:amd64 (16-20260208-1ubuntu1) ... 83s Setting up gcc-16-base:amd64 (16-20260208-1ubuntu1) ... 83s (Reading database ... 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(7.7.0+6.19.0-3.3) ... 91s Setting up libip6tc2:amd64 (1.8.11-2ubuntu3) ... 91s Setting up liblsof0 (4.99.4+dfsg-2build2) ... 91s Setting up libmaxminddb0:amd64 (1.12.2-1build2) ... 91s Setting up libpython3.14-minimal:amd64 (3.14.2-1) ... 91s Setting up libsensors-config (1:3.6.2-2build1) ... 91s Setting up less (668-1build1) ... 91s Setting up linux-headers-6.19.0-3 (6.19.0-3.3) ... 91s Setting up libidn2-0:amd64 (2.3.8-4build1) ... 91s Setting up amd64-microcode (3.20251202.1ubuntu1) ... 91s amd64-microcode: microcode will be updated at next boot 91s Setting up man-db (2.13.1-1build1) ... 91s Updating database of manual pages ... 93s man-db.service is a disabled or a static unit not running, not starting it. 93s Setting up libjansson4:amd64 (2.14-2build4) ... 93s Setting up libglib2.0-data (2.87.2-2) ... 93s Setting up pollinate (4.33-4ubuntu5) ... 103s Setting up busybox-static (1:1.37.0-7ubuntu1) ... 103s Setting up libwrap0:amd64 (7.6.q-36build2) ... 103s Setting up linux-image-6.19.0-3-generic (6.19.0-3.3+1) ... 105s I: /boot/vmlinuz is now a symlink to vmlinuz-6.19.0-3-generic 105s I: /boot/initrd.img is now a symlink to initrd.img-6.19.0-3-generic 105s Setting up libdbus-1-3:amd64 (1.16.2-2ubuntu3) ... 105s Setting up libatomic1:amd64 (16-20260208-1ubuntu1) ... 105s Setting up patch (2.8-2build1) ... 105s Setting up libsensors5:amd64 (1:3.6.2-2build1) ... 105s Setting up busybox-initramfs (1:1.37.0-7ubuntu1) ... 105s Setting up libxtables12:amd64 (1.8.11-2ubuntu3) ... 105s Setting up lsof (4.99.4+dfsg-2build2) ... 105s Setting up libpci3:amd64 (1:3.14.0-1build2) ... 105s Setting up libdevmapper1.02.1:amd64 (2:1.02.205-2ubuntu3) ... 105s Setting up dracut-install (109-11ubuntu1) ... 105s Setting up dmsetup (2:1.02.205-2ubuntu3) ... 105s Setting up libnetfilter-conntrack3:amd64 (1.1.1-1) ... 105s Setting up pnp.ids (0.394-1build1) ... 105s Setting up dbus-session-bus-common (1.16.2-2ubuntu3) ... 105s Setting up python3-linkify-it (2.0.3-1ubuntu3) ... 105s Setting up libpcap0.8t64:amd64 (1.10.5-2ubuntu3) ... 105s Setting up libcryptsetup12:amd64 (2:2.8.0-1ubuntu3) ... 105s Setting up mawk (1.3.4.20260129-1) ... 105s Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10build2) ... 105s Setting up libusb-1.0-0:amd64 (2:1.0.29-2build1) ... 105s Setting up linux-image-virtual (6.19.0-3.3) ... 105s Setting up dbus-system-bus-common (1.16.2-2ubuntu3) ... 105s Setting up libbsd0:amd64 (0.12.2-2build2) ... 105s Setting up libdrm-common (2.4.131-1) ... 105s Setting up libstdc++6:amd64 (16-20260208-1ubuntu1) ... 105s Setting up dbus-bin (1.16.2-2ubuntu3) ... 105s Setting up libonig5:amd64 (6.9.10-1build1) ... 105s Setting up libbpf1:amd64 (1:1.6.2-1build1) ... 105s Setting up ethtool (1:6.15-3build1) ... 105s Setting up python3-referencing (0.36.2-1ubuntu2) ... 105s Setting up libxkbcommon0:amd64 (1.13.1-1) ... 105s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ... 105s Setting up linux-headers-6.19.0-3-generic (6.19.0-3.3) ... 105s Setting up tcpdump (4.99.5-2ubuntu3) ... 105s Setting up linux-image-generic (6.19.0-3.3) ... 105s Setting up wget (1.25.0-2ubuntu4) ... 105s Setting up libpython3.14-stdlib:amd64 (3.14.2-1) ... 105s Setting up iptables (1.8.11-2ubuntu3) ... 105s Setting up iproute2 (6.18.0-1ubuntu1) ... 105s Setting up linux-headers-generic (6.19.0-3.3) ... 105s Setting up dbus-daemon (1.16.2-2ubuntu3) ... 105s Setting up hwdata (0.394-1build1) ... 105s Setting up dbus-user-session (1.16.2-2ubuntu3) ... 105s Setting up libglib2.0-0t64:amd64 (2.87.2-2) ... 105s No schema files found: doing nothing. 105s Setting up dbus (1.16.2-2ubuntu3) ... 105s A reboot is required to replace the running dbus-daemon. 105s Please reboot the system when convenient. 105s Setting up shared-mime-info (2.4-5build3) ... 106s Setting up gir1.2-glib-2.0:amd64 (2.87.2-2) ... 106s Setting up pciutils (1:3.14.0-1build2) ... 106s Setting up python3-markdown-it (3.0.0-3build1) ... 106s Setting up libdrm2:amd64 (2.4.131-1) ... 106s Setting up libpython3.14:amd64 (3.14.2-1) ... 106s Setting up libapt-pkg7.0:amd64 (3.1.15) ... 106s Setting up linux-tools-common (6.19.0-3.3) ... 106s Setting up libgudev-1.0-0:amd64 (1:238-7build1) ... 106s Setting up libdrm-amdgpu1:amd64 (2.4.131-1) ... 106s Setting up apt (3.1.15) ... 107s Setting up linux-headers-virtual (6.19.0-3.3) ... 107s Setting up linux-generic (6.19.0-3.3) ... 107s Setting up libgirepository-2.0-0:amd64 (2.87.2-2) ... 107s Setting up linux-tools-6.19.0-3 (6.19.0-3.3) ... 107s Setting up ubuntu-standard (1.564) ... 107s Setting up gir1.2-girepository-3.0:amd64 (2.87.2-2) ... 107s Setting up linux-virtual (6.19.0-3.3) ... 107s Setting up linux-perf (6.19.0-3.3) ... 107s Setting up linux-tools-6.19.0-3-generic (6.19.0-3.3) ... 107s Processing triggers for debianutils (5.23.2build1) ... 107s Processing triggers for install-info (7.2-5) ... 107s Processing triggers for initramfs-tools (0.150ubuntu7) ... 107s update-initramfs: Generating /boot/initrd.img-6.18.0-9-generic 112s Processing triggers for libc-bin (2.42-2ubuntu4) ... 112s Processing triggers for linux-image-6.19.0-3-generic (6.19.0-3.3+1) ... 112s /etc/kernel/postinst.d/initramfs-tools: 112s update-initramfs: Generating /boot/initrd.img-6.19.0-3-generic 116s /etc/kernel/postinst.d/zz-update-grub: 116s Sourcing file `/etc/default/grub' 116s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg' 116s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg' 116s Generating grub configuration file ... 116s Found linux image: /boot/vmlinuz-6.19.0-3-generic 116s Found initrd image: /boot/initrd.img-6.19.0-3-generic 116s Found linux image: /boot/vmlinuz-6.18.0-9-generic 116s Found initrd image: /boot/initrd.img-6.18.0-9-generic 116s Warning: os-prober will not be executed to detect other bootable partitions. 116s Systems on them will not be added to the GRUB boot configuration. 116s Check GRUB_DISABLE_OS_PROBER documentation entry. 116s Adding boot menu entry for UEFI Firmware Settings ... 116s done 116s autopkgtest [04:10:45]: upgrading testbed (apt dist-upgrade and autopurge) 117s Reading package lists... 117s Building dependency tree... 117s Reading state information... 117s Calculating upgrade... 117s The following package was automatically installed and is no longer required: 117s libpython3.13 117s Use 'sudo apt autoremove' to remove it. 117s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 117s Reading package lists... 118s Building dependency tree... 118s Reading state information... 118s Solving dependencies... 118s The following packages will be REMOVED: 118s libpython3.13* 118s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded. 118s After this operation, 7599 kB disk space will be freed. 118s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 125273 files and directories currently installed.) 118s Removing libpython3.13:amd64 (3.13.11-1) ... 118s Processing triggers for libc-bin (2.42-2ubuntu4) ... 118s autopkgtest [04:10:47]: rebooting testbed after setup commands that affected boot 147s autopkgtest [04:11:16]: testbed running kernel: Linux 6.19.0-3-generic #3-Ubuntu SMP PREEMPT_DYNAMIC Fri Jan 23 20:01:24 UTC 2026 149s autopkgtest [04:11:18]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-demixt 150s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-demixt 1.22.0-2 (dsc) [2319 B] 150s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-demixt 1.22.0-2 (tar) [6354 kB] 150s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-demixt 1.22.0-2 (diff) [3460 B] 150s gpgv: Signature made Tue Jan 14 10:23:08 2025 UTC 150s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 150s gpgv: issuer "crusoe@debian.org" 150s gpgv: Can't check signature: No public key 150s dpkg-source: warning: cannot verify inline signature for ./r-bioc-demixt_1.22.0-2.dsc: no acceptable signature found 150s autopkgtest [04:11:19]: testing package r-bioc-demixt version 1.22.0-2 151s autopkgtest [04:11:20]: build not needed 153s autopkgtest [04:11:22]: test pkg-r-autopkgtest: preparing testbed 153s Reading package lists... 154s Building dependency tree... 154s Reading state information... 154s Solving dependencies... 154s The following NEW packages will be installed: 154s build-essential comerr-dev cpp cpp-15 cpp-15-x86-64-linux-gnu 154s cpp-x86-64-linux-gnu dctrl-tools fontconfig fontconfig-config 154s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 154s fonts-glyphicons-halflings fonts-mathjax g++ g++-15 g++-15-x86-64-linux-gnu 154s g++-x86-64-linux-gnu gcc gcc-15 gcc-15-x86-64-linux-gnu gcc-x86-64-linux-gnu 154s gfortran gfortran-15 gfortran-15-x86-64-linux-gnu gfortran-x86-64-linux-gnu 154s hdf5-helpers icu-devtools javascript-common krb5-multidev libaec-dev libaec0 154s libasan8 libblas-dev libblas3 libblosc1 libboost-dev libboost1.90-dev 154s libbrotli-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0 154s libcrypt-dev libcurl4-openssl-dev libdatrie1 libdeflate-dev libdeflate0 154s libevent-2.1-7t64 libfontconfig1 libgcc-15-dev libgfortran-15-dev 154s libgfortran5 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64 154s libgnutls-openssl27t64 libgnutls28-dev libgomp1 libgraphite2-3 libgssrpc4t64 154s libharfbuzz0b libhdf5-310 libhdf5-cpp-310 libhdf5-dev libhdf5-fortran-310 154s libhdf5-hl-310 libhdf5-hl-cpp-310 libhdf5-hl-fortran-310 libhnswlib-dev 154s libhwasan0 libice6 libicu-dev libidn2-dev libisl23 libitm1 libjbig0 154s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 154s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 154s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 154s libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js 154s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 154s libjs-twitter-bootstrap-datepicker libkadm5clnt-mit12 libkadm5srv-mit12 154s libkdb5-10t64 libkrb5-dev liblapack-dev liblapack3 libldap-dev liblerc4 154s liblsan0 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libnghttp2-dev 154s libp11-kit-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 154s libpaper-utils libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 154s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpsl-dev libquadmath0 154s libreadline-dev librtmp-dev libsharpyuv0 libsm6 libsnappy1v5 libssh2-1-dev 154s libssl-dev libstdc++-15-dev libsz2 libtasn1-6-dev libtcl8.6 libthai-data 154s libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1 libunbound8 154s libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 154s libzstd-dev linux-libc-dev nettle-dev node-bootstrap-sass node-html5shiv 154s node-normalize.css pandoc pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin 154s r-base-core r-base-dev r-bioc-annotate r-bioc-annotationdbi 154s r-bioc-assorthead r-bioc-beachmat r-bioc-biobase r-bioc-biocgenerics 154s r-bioc-biocio r-bioc-biocparallel r-bioc-biostrings r-bioc-bsgenome 154s r-bioc-bsseq r-bioc-delayedarray r-bioc-delayedmatrixstats r-bioc-demixt 154s r-bioc-dss r-bioc-edger r-bioc-genefilter r-bioc-genomeinfodb 154s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicranges 154s r-bioc-hdf5array r-bioc-iranges r-bioc-keggrest r-bioc-limma 154s r-bioc-matrixgenerics r-bioc-rhdf5 r-bioc-rhdf5filters r-bioc-rhdf5lib 154s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 154s r-bioc-s4vectors r-bioc-sparsearray r-bioc-sparsematrixstats 154s r-bioc-summarizedexperiment r-bioc-sva r-bioc-ucsc.utils r-bioc-xvector 154s r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc r-cran-bh 154s r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bslib r-cran-cachem 154s r-cran-cli r-cran-codetools r-cran-commonmark r-cran-cpp11 r-cran-crayon 154s r-cran-curl r-cran-data.table r-cran-dbi r-cran-dendextend r-cran-digest 154s r-cran-evaluate r-cran-evd r-cran-farver r-cran-fastmap r-cran-fontawesome 154s r-cran-formatr r-cran-fs r-cran-futile.logger r-cran-futile.options 154s r-cran-ggplot2 r-cran-glue r-cran-gparotation r-cran-gridextra r-cran-gtable 154s r-cran-gtools r-cran-highr r-cran-htmltools r-cran-httpuv r-cran-httr 154s r-cran-isoband r-cran-jquerylib r-cran-jsonlite r-cran-kernsmooth 154s r-cran-knitr r-cran-labeling r-cran-lambda.r r-cran-later r-cran-lattice 154s r-cran-lifecycle r-cran-littler r-cran-locfit r-cran-magrittr r-cran-mass 154s r-cran-matrix r-cran-matrixcalc r-cran-matrixstats r-cran-memoise 154s r-cran-mgcv r-cran-mime r-cran-mnormt r-cran-nlme r-cran-openssl 154s r-cran-permute r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr r-cran-png 154s r-cran-promises r-cran-psych r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils 154s r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl 154s r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite 154s r-cran-s7 r-cran-sass r-cran-scales r-cran-shiny r-cran-snow 154s r-cran-sourcetools r-cran-statmod r-cran-survival r-cran-sys r-cran-tinytex 154s r-cran-truncdist r-cran-vctrs r-cran-viridis r-cran-viridislite r-cran-withr 154s r-cran-xfun r-cran-xml r-cran-xtable r-cran-yaml rpcsvc-proto unzip 154s x11-common xdg-utils zip zlib1g-dev 154s 0 upgraded, 316 newly installed, 0 to remove and 0 not upgraded. 154s Need to get 397 MB of archives. 154s After this operation, 1261 MB of additional disk space will be used. 154s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 libc-dev-bin amd64 2.42-2ubuntu4 [23.3 kB] 154s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-libc-dev amd64 6.19.0-3.3 [1846 kB] 154s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libcrypt-dev amd64 1:4.5.1-1 [122 kB] 154s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 rpcsvc-proto amd64 1.4.3-1build1 [68.3 kB] 154s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 libc6-dev amd64 2.42-2ubuntu4 [2207 kB] 154s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libisl23 amd64 0.27-1build1 [691 kB] 154s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 libmpc3 amd64 1.3.1-2 [54.8 kB] 154s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [12.9 MB] 154s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15 amd64 15.2.0-12ubuntu1 [1034 B] 154s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [5746 B] 154s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp amd64 4:15.2.0-4ubuntu1 [22.4 kB] 154s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libcc1-0 amd64 16-20260208-1ubuntu1 [51.2 kB] 154s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 16-20260208-1ubuntu1 [162 kB] 154s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 libitm1 amd64 16-20260208-1ubuntu1 [30.2 kB] 154s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libasan8 amd64 16-20260208-1ubuntu1 [3182 kB] 155s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsan0 amd64 16-20260208-1ubuntu1 [1392 kB] 155s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 libtsan2 amd64 16-20260208-1ubuntu1 [2838 kB] 155s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 libubsan1 amd64 16-20260208-1ubuntu1 [1238 kB] 155s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 libhwasan0 amd64 16-20260208-1ubuntu1 [1729 kB] 155s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libquadmath0 amd64 16-20260208-1ubuntu1 [155 kB] 155s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-15-dev amd64 15.2.0-12ubuntu1 [2866 kB] 155s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [25.4 MB] 155s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15 amd64 15.2.0-12ubuntu1 [530 kB] 155s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1208 B] 155s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc amd64 4:15.2.0-4ubuntu1 [5024 B] 155s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++-15-dev amd64 15.2.0-12ubuntu1 [2553 kB] 155s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [14.4 MB] 155s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15 amd64 15.2.0-12ubuntu1 [25.3 kB] 155s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [966 B] 155s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 g++ amd64 4:15.2.0-4ubuntu1 [1100 B] 155s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 build-essential amd64 12.12ubuntu2 [5256 B] 155s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 dctrl-tools amd64 2.24-3build4 [104 kB] 155s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-mono all 2.37-8build1 [502 kB] 155s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-core all 2.37-8build1 [834 kB] 155s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig-config amd64 2.17.1-3ubuntu1 [38.5 kB] 155s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 libfontconfig1 amd64 2.17.1-3ubuntu1 [144 kB] 155s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig amd64 2.17.1-3ubuntu1 [180 kB] 156s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB] 156s Get:39 http://ftpmaster.internal/ubuntu resolute/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB] 156s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB] 156s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 16-20260208-1ubuntu1 [957 kB] 156s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran-15-dev amd64 15.2.0-12ubuntu1 [973 kB] 156s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [13.6 MB] 156s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15 amd64 15.2.0-12ubuntu1 [18.1 kB] 156s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1014 B] 156s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran amd64 4:15.2.0-4ubuntu1 [1172 B] 156s Get:47 http://ftpmaster.internal/ubuntu resolute/universe amd64 hdf5-helpers amd64 1.14.6+repack-2 [17.3 kB] 156s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 icu-devtools amd64 78.2-1ubuntu1 [214 kB] 156s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 javascript-common all 12+nmu1build1 [4864 B] 156s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 comerr-dev amd64 2.1-1.47.2-3ubuntu2 [45.0 kB] 156s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 libgssrpc4t64 amd64 1.22.1-2 [57.9 kB] 156s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libkadm5clnt-mit12 amd64 1.22.1-2 [40.2 kB] 156s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libkdb5-10t64 amd64 1.22.1-2 [41.6 kB] 156s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 libkadm5srv-mit12 amd64 1.22.1-2 [55.0 kB] 156s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 krb5-multidev amd64 1.22.1-2 [126 kB] 156s Get:56 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec0 amd64 1.1.5-1 [22.5 kB] 156s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7ubuntu1 [260 kB] 156s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas-dev amd64 3.12.1-7ubuntu1 [235 kB] 156s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libsnappy1v5 amd64 1.2.2-2 [30.8 kB] 156s Get:60 http://ftpmaster.internal/ubuntu resolute/universe amd64 libblosc1 amd64 1.21.5+ds-2 [35.8 kB] 156s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost1.90-dev amd64 1.90.0-2ubuntu1 [11.5 MB] 156s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-dev amd64 1.90.0.0ubuntu3 [4764 B] 156s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 libbrotli-dev amd64 1.1.0-2build6 [355 kB] 156s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 libbz2-dev amd64 1.0.8-6build2 [36.2 kB] 156s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 libpixman-1-0 amd64 0.46.4-1 [287 kB] 156s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-render0 amd64 1.17.0-2ubuntu1 [16.2 kB] 156s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-shm0 amd64 1.17.0-2ubuntu1 [5808 B] 156s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 libxrender1 amd64 1:0.9.12-1 [19.8 kB] 156s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 libcairo2 amd64 1.18.4-3 [579 kB] 156s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 libidn2-dev amd64 2.3.8-4build1 [121 kB] 156s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 libkrb5-dev amd64 1.22.1-2 [11.9 kB] 156s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libldap-dev amd64 2.6.10+dfsg-1ubuntu5 [315 kB] 156s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libpkgconf3 amd64 1.8.1-4build1 [32.8 kB] 156s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf-bin amd64 1.8.1-4build1 [21.7 kB] 156s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf amd64 1.8.1-4build1 [16.8 kB] 156s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libnghttp2-dev amd64 1.64.0-1.1ubuntu1 [120 kB] 156s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libpsl-dev amd64 0.21.2-1.1build2 [78.7 kB] 156s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-5ubuntu1 [9956 B] 156s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-5ubuntu1 [342 kB] 156s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10build2 [145 kB] 156s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 libunbound8 amd64 1.24.2-1ubuntu1 [462 kB] 156s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 libgnutls-dane0t64 amd64 3.8.10-3ubuntu1 [24.5 kB] 156s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 libgnutls-openssl27t64 amd64 3.8.10-3ubuntu1 [24.8 kB] 156s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 libp11-kit-dev amd64 0.25.10-1 [29.3 kB] 156s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 libtasn1-6-dev amd64 4.21.0-2 [92.4 kB] 156s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 nettle-dev amd64 3.10.2-1 [1176 kB] 156s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 libgnutls28-dev amd64 3.8.10-3ubuntu1 [1096 kB] 156s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu2 [898 kB] 156s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-3 [69.2 kB] 156s Get:90 http://ftpmaster.internal/ubuntu resolute/main amd64 libssl-dev amd64 3.5.3-1ubuntu2 [2936 kB] 156s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 libssh2-1-dev amd64 1.11.1-1build1 [288 kB] 156s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 libzstd-dev amd64 1.5.7+dfsg-3 [376 kB] 156s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 libcurl4-openssl-dev amd64 8.18.0-1ubuntu1 [543 kB] 156s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 libdatrie1 amd64 0.2.14-1 [19.8 kB] 156s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate0 amd64 1.23-2build1 [51.6 kB] 156s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate-dev amd64 1.23-2build1 [58.8 kB] 156s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 libgraphite2-3 amd64 1.3.14-11ubuntu1 [73.7 kB] 156s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 libharfbuzz0b amd64 12.3.2-1 [519 kB] 156s Get:99 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsz2 amd64 1.1.5-1 [17.9 kB] 156s Get:100 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-310 amd64 1.14.6+repack-2 [1433 kB] 156s Get:101 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-cpp-310 amd64 1.14.6+repack-2 [125 kB] 157s Get:102 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-fortran-310 amd64 1.14.6+repack-2 [106 kB] 157s Get:103 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-310 amd64 1.14.6+repack-2 [59.9 kB] 157s Get:104 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-fortran-310 amd64 1.14.6+repack-2 [32.1 kB] 157s Get:105 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-cpp-310 amd64 1.14.6+repack-2 [11.9 kB] 157s Get:106 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8 amd64 2.1.5-4ubuntu3 [156 kB] 157s Get:107 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8-dev amd64 2.1.5-4ubuntu3 [300 kB] 157s Get:108 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8 amd64 8c-2ubuntu12 [2142 B] 157s Get:109 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8-dev amd64 8c-2ubuntu12 [1480 B] 157s Get:110 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-dev amd64 8c-2ubuntu12 [1480 B] 157s Get:111 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec-dev amd64 1.1.5-1 [23.5 kB] 157s Get:112 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-dev amd64 1.14.6+repack-2 [3386 kB] 157s Get:113 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhnswlib-dev all 0.8.0-1build4 [24.4 kB] 157s Get:114 http://ftpmaster.internal/ubuntu resolute/main amd64 x11-common all 1:7.7+24ubuntu1 [22.4 kB] 157s Get:115 http://ftpmaster.internal/ubuntu resolute/main amd64 libice6 amd64 2:1.1.1-1build1 [44.0 kB] 157s Get:116 http://ftpmaster.internal/ubuntu resolute/main amd64 libicu-dev amd64 78.2-1ubuntu1 [12.5 MB] 157s Get:117 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB] 157s Get:118 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB] 157s Get:119 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB] 157s Get:120 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-d3 all 3.5.17-4build1 [136 kB] 157s Get:121 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 157s Get:122 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB] 157s Get:123 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB] 157s Get:124 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB] 157s Get:125 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 157s Get:126 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B] 157s Get:127 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 157s Get:128 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB] 157s Get:129 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB] 157s Get:130 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-prettify all 2015.12.04+dfsg-3 [41.4 kB] 157s Get:131 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7ubuntu1 [2739 kB] 157s Get:132 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack-dev amd64 3.12.1-7ubuntu1 [5433 kB] 157s Get:133 http://ftpmaster.internal/ubuntu resolute/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu2 [207 kB] 157s Get:134 http://ftpmaster.internal/ubuntu resolute/main amd64 liblua5.4-0 amd64 5.4.8-1 [174 kB] 157s Get:135 http://ftpmaster.internal/ubuntu resolute/main amd64 libncurses-dev amd64 6.6+20251231-1 [389 kB] 157s Get:136 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai-data all 0.1.30-1 [155 kB] 157s Get:137 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai0 amd64 0.1.30-1 [19.2 kB] 157s Get:138 http://ftpmaster.internal/ubuntu resolute/main amd64 libpango-1.0-0 amd64 1.57.0-1 [241 kB] 157s Get:139 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangoft2-1.0-0 amd64 1.57.0-1 [53.3 kB] 157s Get:140 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangocairo-1.0-0 amd64 1.57.0-1 [29.0 kB] 157s Get:141 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper2 amd64 2.2.5-0.3build1 [17.3 kB] 157s Get:142 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper-utils amd64 2.2.5-0.3build1 [15.6 kB] 157s Get:143 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-16-0 amd64 10.46-1 [243 kB] 157s Get:144 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-32-0 amd64 10.46-1 [230 kB] 157s Get:145 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-posix3 amd64 10.46-1 [7354 B] 157s Get:146 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-dev amd64 10.46-1 [832 kB] 157s Get:147 http://ftpmaster.internal/ubuntu resolute/main amd64 libpng-dev amd64 1.6.54-1 [273 kB] 157s Get:148 http://ftpmaster.internal/ubuntu resolute/main amd64 libreadline-dev amd64 8.3-3 [189 kB] 157s Get:149 http://ftpmaster.internal/ubuntu resolute/main amd64 libsharpyuv0 amd64 1.5.0-0.1build1 [17.6 kB] 157s Get:150 http://ftpmaster.internal/ubuntu resolute/main amd64 libsm6 amd64 2:1.2.6-1build1 [16.9 kB] 157s Get:151 http://ftpmaster.internal/ubuntu resolute/main amd64 libtcl8.6 amd64 8.6.17+dfsg-1build1 [1003 kB] 157s Get:152 http://ftpmaster.internal/ubuntu resolute/main amd64 libjbig0 amd64 2.1-6.1ubuntu3 [30.0 kB] 157s Get:153 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebp7 amd64 1.5.0-0.1build1 [264 kB] 157s Get:154 http://ftpmaster.internal/ubuntu resolute/main amd64 libtiff6 amd64 4.7.0-3ubuntu3 [209 kB] 157s Get:155 http://ftpmaster.internal/ubuntu resolute/main amd64 libxft2 amd64 2.3.6-1build2 [45.1 kB] 157s Get:156 http://ftpmaster.internal/ubuntu resolute/main amd64 libxss1 amd64 1:1.2.3-1build4 [7084 B] 157s Get:157 http://ftpmaster.internal/ubuntu resolute/main amd64 libtk8.6 amd64 8.6.17-1 [823 kB] 157s Get:158 http://ftpmaster.internal/ubuntu resolute/main amd64 libxt6t64 amd64 1:1.2.1-1.3 [173 kB] 157s Get:159 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB] 157s Get:160 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 157s Get:161 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-normalize.css all 8.0.1-5.1 [10.4 kB] 157s Get:162 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 157s Get:163 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc amd64 3.1.11.1+ds-4 [27.2 MB] 158s Get:164 http://ftpmaster.internal/ubuntu resolute/main amd64 zip amd64 3.0-15ubuntu3 [175 kB] 158s Get:165 http://ftpmaster.internal/ubuntu resolute/main amd64 unzip amd64 6.0-29ubuntu1 [180 kB] 158s Get:166 http://ftpmaster.internal/ubuntu resolute/main amd64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB] 158s Get:167 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-core amd64 4.5.2-1ubuntu2 [28.8 MB] 158s Get:168 http://ftpmaster.internal/ubuntu resolute/main amd64 liblzma-dev amd64 5.8.2-2 [179 kB] 158s Get:169 http://ftpmaster.internal/ubuntu resolute/main amd64 libtirpc-dev amd64 1.3.6+ds-1 [195 kB] 158s Get:170 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-dev all 4.5.2-1ubuntu2 [1880 B] 158s Get:171 http://ftpmaster.internal/ubuntu resolute/universe amd64 pkg-r-autopkgtest all 20250812 [6158 B] 158s Get:172 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 158s Get:173 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biobase amd64 2.66.0-2 [2332 kB] 159s Get:174 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB] 159s Get:175 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-iranges amd64 2.40.1-3 [2309 kB] 159s Get:176 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dbi all 1.2.3-1build1 [855 kB] 159s Get:177 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bit amd64 4.6.0+dfsg-1 [466 kB] 159s Get:178 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bit64 amd64 4.6.0-1-4 [491 kB] 159s Get:179 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rlang amd64 1.1.5-3 [1721 kB] 159s Get:180 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB] 159s Get:181 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 159s Get:182 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB] 159s Get:183 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 159s Get:184 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-blob all 1.3.0-1 [54.1 kB] 159s Get:185 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB] 159s Get:186 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB] 159s Get:187 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-memoise all 2.0.1-1build1 [54.5 kB] 159s Get:188 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB] 159s Get:189 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plogr all 0.2.0-3build2 [15.8 kB] 159s Get:190 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cpp11 all 0.5.3-1 [242 kB] 159s Get:191 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rsqlite amd64 2.3.9-1 [1467 kB] 159s Get:192 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-curl amd64 7.0.0+dfsg-1 [202 kB] 159s Get:193 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB] 159s Get:194 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB] 159s Get:195 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB] 159s Get:196 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB] 159s Get:197 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-openssl amd64 2.3.2+dfsg-1 [407 kB] 159s Get:198 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB] 159s Get:199 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 159s Get:200 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-png amd64 0.1-8-1build2 [40.6 kB] 159s Get:201 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 159s Get:202 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB] 159s Get:203 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 159s Get:204 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 159s Get:205 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 159s Get:206 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB] 159s Get:207 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.3 MB] 160s Get:208 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-keggrest all 1.46.0+dfsg-3 [183 kB] 160s Get:209 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-annotationdbi all 1.68.0-2 [4857 kB] 160s Get:210 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xml amd64 3.99-0.20-1 [1751 kB] 160s Get:211 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xtable all 1:1.8-4-2build1 [691 kB] 160s Get:212 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-annotate all 1.84.0+dfsg-2 [1870 kB] 160s Get:213 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-assorthead all 1.0.1+ds-2 [194 kB] 160s Get:214 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lattice amd64 0.22-7-1 [1367 kB] 160s Get:215 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrix amd64 1.7-4-1 [4220 kB] 160s Get:216 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrixstats amd64 1.5.0-1 [542 kB] 160s Get:217 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 160s Get:218 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-abind all 1.4-8-1build1 [67.0 kB] 160s Get:219 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-s4arrays amd64 1.6.0+dfsg-2 [698 kB] 160s Get:220 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-sparsearray amd64 1.6.2+dfsg-2 [1391 kB] 160s Get:221 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-delayedarray amd64 0.32.0+dfsg-2 [2064 kB] 160s Get:222 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-littler amd64 0.3.22-1 [85.5 kB] 160s Get:223 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 160s Get:224 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpp amd64 1.1.0-1 [2021 kB] 160s Get:225 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-beachmat amd64 2.22.0+ds-3 [958 kB] 161s Get:226 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 161s Get:227 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-formatr all 1.14-2 [152 kB] 161s Get:228 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lambda.r all 1.2.4-2build2 [118 kB] 161s Get:229 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-futile.options all 1.0.1-3build2 [20.5 kB] 161s Get:230 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-futile.logger all 1.4.3-4build2 [98.4 kB] 161s Get:231 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-snow all 1:0.4.4-2build1 [98.7 kB] 161s Get:232 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-codetools all 0.2-20-1build1 [91.1 kB] 161s Get:233 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bh all 1.84.0-1 [5962 B] 161s Get:234 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocparallel amd64 1.40.0-2 [1337 kB] 161s Get:235 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomicranges amd64 1.58.0+dfsg-2 [2083 kB] 161s Get:236 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bitops amd64 1.0-9-1 [30.3 kB] 161s Get:237 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rhtslib amd64 3.2.0+dfsg-2 [1499 kB] 161s Get:238 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rsamtools amd64 2.22.0+dfsg-2 [3745 kB] 161s Get:239 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 161s Get:240 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomicalignments amd64 1.42.0-2 [2165 kB] 161s Get:241 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [807 kB] 161s Get:242 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rjson amd64 0.2.23-1 [104 kB] 161s Get:243 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB] 161s Get:244 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-restfulr amd64 0.0.15-1 [380 kB] 161s Get:245 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rtracklayer amd64 1.66.0-3 [5225 kB] 161s Get:246 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-bsgenome all 1.74.0-2 [7001 kB] 161s Get:247 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB] 161s Get:248 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 161s Get:249 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB] 161s Get:250 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridislite all 0.4.3-1 [1088 kB] 161s Get:251 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-scales all 1.4.0-1 [725 kB] 161s Get:252 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-locfit amd64 1.5-9.12-1 [552 kB] 162s Get:253 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtools amd64 3.9.5-1build1 [345 kB] 162s Get:254 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-data.table amd64 1.17.0+dfsg-1 [2168 kB] 162s Get:255 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 162s Get:256 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r.oo all 1.27.1-1 [978 kB] 162s Get:257 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r.utils all 2.13.0-1 [1423 kB] 162s Get:258 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-sparsematrixstats amd64 1.18.0+dfsg-2 [877 kB] 162s Get:259 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-delayedmatrixstats all 1.28.1+ds-1 [502 kB] 162s Get:260 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-permute all 0.9-8-1 [237 kB] 162s Get:261 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB] 162s Get:262 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-limma amd64 3.62.2+dfsg-1 [1969 kB] 162s Get:263 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rhdf5lib amd64 1.28.0+dfsg-3 [97.2 kB] 162s Get:264 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rhdf5filters amd64 1.18.1+dfsg-1 [137 kB] 162s Get:265 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rhdf5 amd64 2.50.2+dfsg-1build1 [822 kB] 162s Get:266 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-hdf5array amd64 1.34.0-2build1 [8792 kB] 163s Get:267 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-bsseq amd64 1.42.0+dfsg-2 [3062 kB] 163s Get:268 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-evaluate all 1.0.5-1 [117 kB] 163s Get:269 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xfun amd64 0.55+dfsg-1 [587 kB] 163s Get:270 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 163s Get:271 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB] 163s Get:272 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-knitr all 1.51+dfsg-1 [847 kB] 163s Get:273 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mass amd64 7.3-65-1 [1116 kB] 163s Get:274 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-kernsmooth amd64 2.23-26-1build1 [93.6 kB] 163s Get:275 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrixcalc all 1.0.6-2 [199 kB] 163s Get:276 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-base64enc amd64 0.1-3-3build1 [28.5 kB] 163s Get:277 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-digest amd64 0.6.39-1 [203 kB] 163s Get:278 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB] 163s Get:279 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB] 163s Get:280 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB] 163s Get:281 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rappdirs amd64 0.3.3-1build1 [49.3 kB] 163s Get:282 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB] 164s Get:283 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB] 164s Get:284 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 164s Get:285 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tinytex all 0.58-1 [148 kB] 164s Get:286 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-modernizr all 3.13.0-0.1build1 [100 kB] 164s Get:287 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB] 164s Get:288 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 164s Get:289 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB] 164s Get:290 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB] 164s Get:291 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB] 164s Get:292 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 164s Get:293 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-commonmark amd64 1.9.5-1 [138 kB] 164s Get:294 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 164s Get:295 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 164s Get:296 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rmarkdown all 2.30+dfsg-1 [1501 kB] 164s Get:297 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-dss amd64 2.54.0+dfsg-2 [653 kB] 164s Get:298 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 164s Get:299 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 164s Get:300 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-s7 amd64 0.2.0-1 [328 kB] 164s Get:301 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 r-cran-ggplot2 all 4.0.2+dfsg-1 [4941 kB] 164s Get:302 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gridextra all 2.3-3build2 [1032 kB] 164s Get:303 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridis all 0.6.5-1 [2770 kB] 165s Get:304 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dendextend all 1.19.1+dfsg-1 [1003 kB] 165s Get:305 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mnormt amd64 2.1.2-1 [176 kB] 165s Get:306 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nlme amd64 3.1.168-1 [2320 kB] 165s Get:307 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gparotation all 2025.3-1-1 [614 kB] 165s Get:308 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-psych all 2.4.12-1 [3563 kB] 165s Get:309 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mgcv amd64 1.9-4-1 [3556 kB] 165s Get:310 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-survival amd64 3.8-6-1 [8274 kB] 166s Get:311 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genefilter amd64 1.88.0-2 [1243 kB] 166s Get:312 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-edger amd64 4.4.2+dfsg-1 [1120 kB] 166s Get:313 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-sva amd64 3.54.0-2 [466 kB] 166s Get:314 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-evd amd64 2.3-7.1-1 [1675 kB] 166s Get:315 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-truncdist all 1.0-2-4build2 [35.0 kB] 166s Get:316 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-demixt amd64 1.22.0-2 [4066 kB] 166s Preconfiguring packages ... 166s Fetched 397 MB in 12s (32.8 MB/s) 167s Selecting previously unselected package libc-dev-bin. 167s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 125269 files and directories currently installed.) 167s Preparing to unpack .../000-libc-dev-bin_2.42-2ubuntu4_amd64.deb ... 167s Unpacking libc-dev-bin (2.42-2ubuntu4) ... 167s Selecting previously unselected package linux-libc-dev:amd64. 167s Preparing to unpack .../001-linux-libc-dev_6.19.0-3.3_amd64.deb ... 167s Unpacking linux-libc-dev:amd64 (6.19.0-3.3) ... 167s Selecting previously unselected package libcrypt-dev:amd64. 167s Preparing to unpack .../002-libcrypt-dev_1%3a4.5.1-1_amd64.deb ... 167s Unpacking libcrypt-dev:amd64 (1:4.5.1-1) ... 167s Selecting previously unselected package rpcsvc-proto. 167s Preparing to unpack .../003-rpcsvc-proto_1.4.3-1build1_amd64.deb ... 167s Unpacking rpcsvc-proto (1.4.3-1build1) ... 167s Selecting previously unselected package libc6-dev:amd64. 167s Preparing to unpack .../004-libc6-dev_2.42-2ubuntu4_amd64.deb ... 167s Unpacking libc6-dev:amd64 (2.42-2ubuntu4) ... 167s Selecting previously unselected package libisl23:amd64. 167s Preparing to unpack .../005-libisl23_0.27-1build1_amd64.deb ... 167s Unpacking libisl23:amd64 (0.27-1build1) ... 167s Selecting previously unselected package libmpc3:amd64. 167s Preparing to unpack .../006-libmpc3_1.3.1-2_amd64.deb ... 167s Unpacking libmpc3:amd64 (1.3.1-2) ... 167s Selecting previously unselected package cpp-15-x86-64-linux-gnu. 167s Preparing to unpack .../007-cpp-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ... 167s Unpacking cpp-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 167s Selecting previously unselected package cpp-15. 167s Preparing to unpack .../008-cpp-15_15.2.0-12ubuntu1_amd64.deb ... 167s Unpacking cpp-15 (15.2.0-12ubuntu1) ... 167s Selecting previously unselected package cpp-x86-64-linux-gnu. 167s Preparing to unpack .../009-cpp-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 167s Unpacking cpp-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 167s Selecting previously unselected package cpp. 167s Preparing to unpack .../010-cpp_4%3a15.2.0-4ubuntu1_amd64.deb ... 167s Unpacking cpp (4:15.2.0-4ubuntu1) ... 167s Selecting previously unselected package libcc1-0:amd64. 167s Preparing to unpack .../011-libcc1-0_16-20260208-1ubuntu1_amd64.deb ... 167s Unpacking libcc1-0:amd64 (16-20260208-1ubuntu1) ... 167s Selecting previously unselected package libgomp1:amd64. 167s Preparing to unpack .../012-libgomp1_16-20260208-1ubuntu1_amd64.deb ... 167s Unpacking libgomp1:amd64 (16-20260208-1ubuntu1) ... 167s Selecting previously unselected package libitm1:amd64. 167s Preparing to unpack .../013-libitm1_16-20260208-1ubuntu1_amd64.deb ... 167s Unpacking libitm1:amd64 (16-20260208-1ubuntu1) ... 167s Selecting previously unselected package libasan8:amd64. 167s Preparing to unpack .../014-libasan8_16-20260208-1ubuntu1_amd64.deb ... 167s Unpacking libasan8:amd64 (16-20260208-1ubuntu1) ... 167s Selecting previously unselected package liblsan0:amd64. 167s Preparing to unpack .../015-liblsan0_16-20260208-1ubuntu1_amd64.deb ... 167s Unpacking liblsan0:amd64 (16-20260208-1ubuntu1) ... 167s Selecting previously unselected package libtsan2:amd64. 167s Preparing to unpack .../016-libtsan2_16-20260208-1ubuntu1_amd64.deb ... 167s Unpacking libtsan2:amd64 (16-20260208-1ubuntu1) ... 167s Selecting previously unselected package libubsan1:amd64. 167s Preparing to unpack .../017-libubsan1_16-20260208-1ubuntu1_amd64.deb ... 167s Unpacking libubsan1:amd64 (16-20260208-1ubuntu1) ... 167s Selecting previously unselected package libhwasan0:amd64. 167s Preparing to unpack .../018-libhwasan0_16-20260208-1ubuntu1_amd64.deb ... 167s Unpacking libhwasan0:amd64 (16-20260208-1ubuntu1) ... 167s Selecting previously unselected package libquadmath0:amd64. 167s Preparing to unpack .../019-libquadmath0_16-20260208-1ubuntu1_amd64.deb ... 167s Unpacking libquadmath0:amd64 (16-20260208-1ubuntu1) ... 167s Selecting previously unselected package libgcc-15-dev:amd64. 167s Preparing to unpack .../020-libgcc-15-dev_15.2.0-12ubuntu1_amd64.deb ... 167s Unpacking libgcc-15-dev:amd64 (15.2.0-12ubuntu1) ... 167s Selecting previously unselected package gcc-15-x86-64-linux-gnu. 167s Preparing to unpack .../021-gcc-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ... 167s Unpacking gcc-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 168s Selecting previously unselected package gcc-15. 168s Preparing to unpack .../022-gcc-15_15.2.0-12ubuntu1_amd64.deb ... 168s Unpacking gcc-15 (15.2.0-12ubuntu1) ... 168s Selecting previously unselected package gcc-x86-64-linux-gnu. 168s Preparing to unpack .../023-gcc-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 168s Unpacking gcc-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 168s Selecting previously unselected package gcc. 168s Preparing to unpack .../024-gcc_4%3a15.2.0-4ubuntu1_amd64.deb ... 168s Unpacking gcc (4:15.2.0-4ubuntu1) ... 168s Selecting previously unselected package libstdc++-15-dev:amd64. 168s Preparing to unpack .../025-libstdc++-15-dev_15.2.0-12ubuntu1_amd64.deb ... 168s Unpacking libstdc++-15-dev:amd64 (15.2.0-12ubuntu1) ... 168s Selecting previously unselected package g++-15-x86-64-linux-gnu. 168s Preparing to unpack .../026-g++-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ... 168s Unpacking g++-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 168s Selecting previously unselected package g++-15. 168s Preparing to unpack .../027-g++-15_15.2.0-12ubuntu1_amd64.deb ... 168s Unpacking g++-15 (15.2.0-12ubuntu1) ... 168s Selecting previously unselected package g++-x86-64-linux-gnu. 168s Preparing to unpack .../028-g++-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 168s Unpacking g++-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 168s Selecting previously unselected package g++. 168s Preparing to unpack .../029-g++_4%3a15.2.0-4ubuntu1_amd64.deb ... 168s Unpacking g++ (4:15.2.0-4ubuntu1) ... 168s Selecting previously unselected package build-essential. 168s Preparing to unpack .../030-build-essential_12.12ubuntu2_amd64.deb ... 168s Unpacking build-essential (12.12ubuntu2) ... 168s Selecting previously unselected package dctrl-tools. 168s Preparing to unpack .../031-dctrl-tools_2.24-3build4_amd64.deb ... 168s Unpacking dctrl-tools (2.24-3build4) ... 168s Selecting previously unselected package fonts-dejavu-mono. 168s Preparing to unpack .../032-fonts-dejavu-mono_2.37-8build1_all.deb ... 168s Unpacking fonts-dejavu-mono (2.37-8build1) ... 168s Selecting previously unselected package fonts-dejavu-core. 168s Preparing to unpack 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package javascript-common. 168s Preparing to unpack .../048-javascript-common_12+nmu1build1_all.deb ... 168s Unpacking javascript-common (12+nmu1build1) ... 168s Selecting previously unselected package comerr-dev:amd64. 168s Preparing to unpack .../049-comerr-dev_2.1-1.47.2-3ubuntu2_amd64.deb ... 168s Unpacking comerr-dev:amd64 (2.1-1.47.2-3ubuntu2) ... 168s Selecting previously unselected package libgssrpc4t64:amd64. 168s Preparing to unpack .../050-libgssrpc4t64_1.22.1-2_amd64.deb ... 168s Unpacking libgssrpc4t64:amd64 (1.22.1-2) ... 168s Selecting previously unselected package libkadm5clnt-mit12:amd64. 168s Preparing to unpack .../051-libkadm5clnt-mit12_1.22.1-2_amd64.deb ... 168s Unpacking libkadm5clnt-mit12:amd64 (1.22.1-2) ... 168s Selecting previously unselected package libkdb5-10t64:amd64. 168s Preparing to unpack .../052-libkdb5-10t64_1.22.1-2_amd64.deb ... 168s Unpacking libkdb5-10t64:amd64 (1.22.1-2) ... 168s Selecting previously unselected package libkadm5srv-mit12:amd64. 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(1.0.8-6build2) ... 169s Selecting previously unselected package libpixman-1-0:amd64. 169s Preparing to unpack .../064-libpixman-1-0_0.46.4-1_amd64.deb ... 169s Unpacking libpixman-1-0:amd64 (0.46.4-1) ... 169s Selecting previously unselected package libxcb-render0:amd64. 169s Preparing to unpack .../065-libxcb-render0_1.17.0-2ubuntu1_amd64.deb ... 169s Unpacking libxcb-render0:amd64 (1.17.0-2ubuntu1) ... 169s Selecting previously unselected package libxcb-shm0:amd64. 169s Preparing to unpack .../066-libxcb-shm0_1.17.0-2ubuntu1_amd64.deb ... 169s Unpacking libxcb-shm0:amd64 (1.17.0-2ubuntu1) ... 169s Selecting previously unselected package libxrender1:amd64. 169s Preparing to unpack .../067-libxrender1_1%3a0.9.12-1_amd64.deb ... 169s Unpacking libxrender1:amd64 (1:0.9.12-1) ... 169s Selecting previously unselected package libcairo2:amd64. 169s Preparing to unpack .../068-libcairo2_1.18.4-3_amd64.deb ... 169s Unpacking libcairo2:amd64 (1.18.4-3) ... 169s Selecting previously unselected package libidn2-dev:amd64. 169s Preparing to unpack .../069-libidn2-dev_2.3.8-4build1_amd64.deb ... 169s Unpacking libidn2-dev:amd64 (2.3.8-4build1) ... 169s Selecting previously unselected package libkrb5-dev:amd64. 169s Preparing to unpack .../070-libkrb5-dev_1.22.1-2_amd64.deb ... 169s Unpacking libkrb5-dev:amd64 (1.22.1-2) ... 169s Selecting previously unselected package libldap-dev:amd64. 169s Preparing to unpack .../071-libldap-dev_2.6.10+dfsg-1ubuntu5_amd64.deb ... 169s Unpacking libldap-dev:amd64 (2.6.10+dfsg-1ubuntu5) ... 169s Selecting previously unselected package libpkgconf3:amd64. 169s Preparing to unpack .../072-libpkgconf3_1.8.1-4build1_amd64.deb ... 169s Unpacking libpkgconf3:amd64 (1.8.1-4build1) ... 169s Selecting previously unselected package pkgconf-bin. 169s Preparing to unpack .../073-pkgconf-bin_1.8.1-4build1_amd64.deb ... 169s Unpacking pkgconf-bin (1.8.1-4build1) ... 169s Selecting previously unselected package pkgconf:amd64. 170s Preparing to unpack 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unpack .../079-libevent-2.1-7t64_2.1.12-stable-10build2_amd64.deb ... 170s Unpacking libevent-2.1-7t64:amd64 (2.1.12-stable-10build2) ... 170s Selecting previously unselected package libunbound8:amd64. 170s Preparing to unpack .../080-libunbound8_1.24.2-1ubuntu1_amd64.deb ... 170s Unpacking libunbound8:amd64 (1.24.2-1ubuntu1) ... 170s Selecting previously unselected package libgnutls-dane0t64:amd64. 170s Preparing to unpack .../081-libgnutls-dane0t64_3.8.10-3ubuntu1_amd64.deb ... 170s Unpacking libgnutls-dane0t64:amd64 (3.8.10-3ubuntu1) ... 170s Selecting previously unselected package libgnutls-openssl27t64:amd64. 170s Preparing to unpack .../082-libgnutls-openssl27t64_3.8.10-3ubuntu1_amd64.deb ... 170s Unpacking libgnutls-openssl27t64:amd64 (3.8.10-3ubuntu1) ... 170s Selecting previously unselected package libp11-kit-dev:amd64. 170s Preparing to unpack .../083-libp11-kit-dev_0.25.10-1_amd64.deb ... 170s Unpacking libp11-kit-dev:amd64 (0.25.10-1) ... 170s Selecting previously unselected package libtasn1-6-dev:amd64. 170s Preparing to unpack .../084-libtasn1-6-dev_4.21.0-2_amd64.deb ... 170s Unpacking libtasn1-6-dev:amd64 (4.21.0-2) ... 170s Selecting previously unselected package nettle-dev:amd64. 170s Preparing to unpack .../085-nettle-dev_3.10.2-1_amd64.deb ... 170s Unpacking nettle-dev:amd64 (3.10.2-1) ... 170s Selecting previously unselected package libgnutls28-dev:amd64. 170s Preparing to unpack .../086-libgnutls28-dev_3.8.10-3ubuntu1_amd64.deb ... 170s Unpacking libgnutls28-dev:amd64 (3.8.10-3ubuntu1) ... 170s Selecting previously unselected package zlib1g-dev:amd64. 170s Preparing to unpack .../087-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_amd64.deb ... 170s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 170s Selecting previously unselected package librtmp-dev:amd64. 170s Preparing to unpack .../088-librtmp-dev_2.4+20151223.gitfa8646d.1-3_amd64.deb ... 170s Unpacking librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-3) ... 170s Selecting previously unselected package libssl-dev:amd64. 170s Preparing to unpack .../089-libssl-dev_3.5.3-1ubuntu2_amd64.deb ... 170s Unpacking libssl-dev:amd64 (3.5.3-1ubuntu2) ... 170s Selecting previously unselected package libssh2-1-dev:amd64. 170s Preparing to unpack .../090-libssh2-1-dev_1.11.1-1build1_amd64.deb ... 170s Unpacking libssh2-1-dev:amd64 (1.11.1-1build1) ... 170s Selecting previously unselected package libzstd-dev:amd64. 170s Preparing to unpack .../091-libzstd-dev_1.5.7+dfsg-3_amd64.deb ... 170s Unpacking libzstd-dev:amd64 (1.5.7+dfsg-3) ... 170s Selecting previously unselected package libcurl4-openssl-dev:amd64. 170s Preparing to unpack .../092-libcurl4-openssl-dev_8.18.0-1ubuntu1_amd64.deb ... 170s Unpacking libcurl4-openssl-dev:amd64 (8.18.0-1ubuntu1) ... 170s Selecting previously unselected package libdatrie1:amd64. 170s Preparing to unpack .../093-libdatrie1_0.2.14-1_amd64.deb ... 170s Unpacking libdatrie1:amd64 (0.2.14-1) ... 170s Selecting previously unselected package libdeflate0:amd64. 170s Preparing to unpack .../094-libdeflate0_1.23-2build1_amd64.deb ... 170s Unpacking libdeflate0:amd64 (1.23-2build1) ... 170s Selecting previously unselected package libdeflate-dev:amd64. 170s Preparing to unpack .../095-libdeflate-dev_1.23-2build1_amd64.deb ... 170s Unpacking libdeflate-dev:amd64 (1.23-2build1) ... 170s Selecting previously unselected package libgraphite2-3:amd64. 170s Preparing to unpack .../096-libgraphite2-3_1.3.14-11ubuntu1_amd64.deb ... 170s Unpacking libgraphite2-3:amd64 (1.3.14-11ubuntu1) ... 170s Selecting previously unselected package libharfbuzz0b:amd64. 170s Preparing to unpack .../097-libharfbuzz0b_12.3.2-1_amd64.deb ... 170s Unpacking libharfbuzz0b:amd64 (12.3.2-1) ... 170s Selecting previously unselected package libsz2:amd64. 170s Preparing to unpack .../098-libsz2_1.1.5-1_amd64.deb ... 170s Unpacking libsz2:amd64 (1.1.5-1) ... 170s Selecting previously unselected package libhdf5-310:amd64. 170s Preparing to unpack .../099-libhdf5-310_1.14.6+repack-2_amd64.deb ... 170s Unpacking libhdf5-310:amd64 (1.14.6+repack-2) ... 170s Selecting previously unselected package libhdf5-cpp-310:amd64. 170s Preparing to unpack .../100-libhdf5-cpp-310_1.14.6+repack-2_amd64.deb ... 170s Unpacking libhdf5-cpp-310:amd64 (1.14.6+repack-2) ... 170s Selecting previously unselected package libhdf5-fortran-310:amd64. 170s Preparing to unpack .../101-libhdf5-fortran-310_1.14.6+repack-2_amd64.deb ... 170s Unpacking libhdf5-fortran-310:amd64 (1.14.6+repack-2) ... 170s Selecting previously unselected package libhdf5-hl-310:amd64. 170s Preparing to unpack .../102-libhdf5-hl-310_1.14.6+repack-2_amd64.deb ... 170s Unpacking libhdf5-hl-310:amd64 (1.14.6+repack-2) ... 170s Selecting previously unselected package libhdf5-hl-fortran-310:amd64. 170s Preparing to unpack .../103-libhdf5-hl-fortran-310_1.14.6+repack-2_amd64.deb ... 170s Unpacking libhdf5-hl-fortran-310:amd64 (1.14.6+repack-2) ... 170s Selecting previously unselected package libhdf5-hl-cpp-310:amd64. 170s Preparing to unpack .../104-libhdf5-hl-cpp-310_1.14.6+repack-2_amd64.deb ... 170s Unpacking libhdf5-hl-cpp-310:amd64 (1.14.6+repack-2) ... 170s Selecting previously unselected package libjpeg-turbo8:amd64. 170s Preparing to unpack .../105-libjpeg-turbo8_2.1.5-4ubuntu3_amd64.deb ... 170s Unpacking libjpeg-turbo8:amd64 (2.1.5-4ubuntu3) ... 170s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 170s Preparing to unpack .../106-libjpeg-turbo8-dev_2.1.5-4ubuntu3_amd64.deb ... 170s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-4ubuntu3) ... 170s Selecting previously unselected package libjpeg8:amd64. 170s Preparing to unpack .../107-libjpeg8_8c-2ubuntu12_amd64.deb ... 170s Unpacking libjpeg8:amd64 (8c-2ubuntu12) ... 170s Selecting previously unselected package libjpeg8-dev:amd64. 170s Preparing to unpack .../108-libjpeg8-dev_8c-2ubuntu12_amd64.deb ... 170s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu12) ... 170s Selecting previously unselected package libjpeg-dev:amd64. 170s Preparing to unpack .../109-libjpeg-dev_8c-2ubuntu12_amd64.deb ... 170s Unpacking libjpeg-dev:amd64 (8c-2ubuntu12) ... 170s Selecting previously unselected package libaec-dev:amd64. 170s Preparing to unpack .../110-libaec-dev_1.1.5-1_amd64.deb ... 170s Unpacking libaec-dev:amd64 (1.1.5-1) ... 170s Selecting previously unselected package libhdf5-dev. 170s Preparing to unpack .../111-libhdf5-dev_1.14.6+repack-2_amd64.deb ... 170s Unpacking libhdf5-dev (1.14.6+repack-2) ... 170s Selecting previously unselected package libhnswlib-dev. 170s Preparing to unpack .../112-libhnswlib-dev_0.8.0-1build4_all.deb ... 170s Unpacking libhnswlib-dev (0.8.0-1build4) ... 170s Selecting previously unselected package x11-common. 170s Preparing to unpack .../113-x11-common_1%3a7.7+24ubuntu1_all.deb ... 170s Unpacking x11-common (1:7.7+24ubuntu1) ... 170s Selecting previously unselected package libice6:amd64. 170s Preparing to unpack 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libjs-d3 (3.5.17-4build1) ... 171s Selecting previously unselected package libjs-es5-shim. 171s Preparing to unpack .../120-libjs-es5-shim_4.6.7-2_all.deb ... 171s Unpacking libjs-es5-shim (4.6.7-2) ... 171s Selecting previously unselected package libjs-highlight.js. 171s Preparing to unpack .../121-libjs-highlight.js_10.7.3+dfsg-2_all.deb ... 171s Unpacking libjs-highlight.js (10.7.3+dfsg-2) ... 171s Selecting previously unselected package libjs-jquery. 171s Preparing to unpack .../122-libjs-jquery_3.7.1+dfsg+~3.5.33-1build1_all.deb ... 171s Unpacking libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ... 171s Selecting previously unselected package libjs-jquery-datatables. 171s Preparing to unpack .../123-libjs-jquery-datatables_1.11.5+dfsg-2build1_all.deb ... 171s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2build1) ... 171s Selecting previously unselected package libjs-sifter.js. 171s Preparing to unpack .../124-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 171s Unpacking libjs-sifter.js 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libjs-prettify (2015.12.04+dfsg-3) ... 171s Selecting previously unselected package liblapack3:amd64. 171s Preparing to unpack .../130-liblapack3_3.12.1-7ubuntu1_amd64.deb ... 171s Unpacking liblapack3:amd64 (3.12.1-7ubuntu1) ... 171s Selecting previously unselected package liblapack-dev:amd64. 171s Preparing to unpack .../131-liblapack-dev_3.12.1-7ubuntu1_amd64.deb ... 171s Unpacking liblapack-dev:amd64 (3.12.1-7ubuntu1) ... 171s Selecting previously unselected package liblerc4:amd64. 171s Preparing to unpack .../132-liblerc4_4.0.0+ds-5ubuntu2_amd64.deb ... 171s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu2) ... 171s Selecting previously unselected package liblua5.4-0:amd64. 171s Preparing to unpack .../133-liblua5.4-0_5.4.8-1_amd64.deb ... 171s Unpacking liblua5.4-0:amd64 (5.4.8-1) ... 171s Selecting previously unselected package libncurses-dev:amd64. 171s Preparing to unpack .../134-libncurses-dev_6.6+20251231-1_amd64.deb ... 171s Unpacking libncurses-dev:amd64 (6.6+20251231-1) ... 171s Selecting previously unselected package libthai-data. 171s Preparing to unpack .../135-libthai-data_0.1.30-1_all.deb ... 171s Unpacking libthai-data (0.1.30-1) ... 171s Selecting previously unselected package libthai0:amd64. 171s Preparing to unpack .../136-libthai0_0.1.30-1_amd64.deb ... 171s Unpacking libthai0:amd64 (0.1.30-1) ... 171s Selecting previously unselected package libpango-1.0-0:amd64. 171s Preparing to unpack .../137-libpango-1.0-0_1.57.0-1_amd64.deb ... 171s Unpacking libpango-1.0-0:amd64 (1.57.0-1) ... 171s Selecting previously unselected package libpangoft2-1.0-0:amd64. 171s Preparing to unpack .../138-libpangoft2-1.0-0_1.57.0-1_amd64.deb ... 171s Unpacking libpangoft2-1.0-0:amd64 (1.57.0-1) ... 171s Selecting previously unselected package libpangocairo-1.0-0:amd64. 171s Preparing to unpack .../139-libpangocairo-1.0-0_1.57.0-1_amd64.deb ... 171s Unpacking libpangocairo-1.0-0:amd64 (1.57.0-1) ... 171s Selecting previously unselected package libpaper2:amd64. 171s 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... 171s Unpacking libpcre2-dev:amd64 (10.46-1) ... 171s Selecting previously unselected package libpng-dev:amd64. 171s Preparing to unpack .../146-libpng-dev_1.6.54-1_amd64.deb ... 171s Unpacking libpng-dev:amd64 (1.6.54-1) ... 171s Selecting previously unselected package libreadline-dev:amd64. 171s Preparing to unpack .../147-libreadline-dev_8.3-3_amd64.deb ... 171s Unpacking libreadline-dev:amd64 (8.3-3) ... 171s Selecting previously unselected package libsharpyuv0:amd64. 171s Preparing to unpack .../148-libsharpyuv0_1.5.0-0.1build1_amd64.deb ... 171s Unpacking libsharpyuv0:amd64 (1.5.0-0.1build1) ... 171s Selecting previously unselected package libsm6:amd64. 171s Preparing to unpack .../149-libsm6_2%3a1.2.6-1build1_amd64.deb ... 171s Unpacking libsm6:amd64 (2:1.2.6-1build1) ... 171s Selecting previously unselected package libtcl8.6:amd64. 171s Preparing to unpack .../150-libtcl8.6_8.6.17+dfsg-1build1_amd64.deb ... 171s Unpacking libtcl8.6:amd64 (8.6.17+dfsg-1build1) ... 171s Selecting previously unselected package libjbig0:amd64. 171s Preparing to unpack .../151-libjbig0_2.1-6.1ubuntu3_amd64.deb ... 171s Unpacking libjbig0:amd64 (2.1-6.1ubuntu3) ... 171s Selecting previously unselected package libwebp7:amd64. 171s Preparing to unpack .../152-libwebp7_1.5.0-0.1build1_amd64.deb ... 171s Unpacking libwebp7:amd64 (1.5.0-0.1build1) ... 171s Selecting previously unselected package libtiff6:amd64. 171s Preparing to unpack .../153-libtiff6_4.7.0-3ubuntu3_amd64.deb ... 171s Unpacking libtiff6:amd64 (4.7.0-3ubuntu3) ... 171s Selecting previously unselected package libxft2:amd64. 171s Preparing to unpack .../154-libxft2_2.3.6-1build2_amd64.deb ... 171s Unpacking libxft2:amd64 (2.3.6-1build2) ... 171s Selecting previously unselected package libxss1:amd64. 171s Preparing to unpack .../155-libxss1_1%3a1.2.3-1build4_amd64.deb ... 171s Unpacking libxss1:amd64 (1:1.2.3-1build4) ... 172s Selecting previously unselected package libtk8.6:amd64. 172s Preparing to unpack .../156-libtk8.6_8.6.17-1_amd64.deb ... 172s Unpacking libtk8.6:amd64 (8.6.17-1) ... 172s Selecting previously unselected package libxt6t64:amd64. 172s Preparing to unpack .../157-libxt6t64_1%3a1.2.1-1.3_amd64.deb ... 172s Unpacking libxt6t64:amd64 (1:1.2.1-1.3) ... 172s Selecting previously unselected package node-bootstrap-sass. 172s Preparing to unpack .../158-node-bootstrap-sass_3.4.3-2_all.deb ... 172s Unpacking node-bootstrap-sass (3.4.3-2) ... 172s Selecting previously unselected package node-html5shiv. 172s Preparing to unpack .../159-node-html5shiv_3.7.3+dfsg-5_all.deb ... 172s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 172s Selecting previously unselected package node-normalize.css. 172s Preparing to unpack .../160-node-normalize.css_8.0.1-5.1_all.deb ... 172s Unpacking node-normalize.css (8.0.1-5.1) ... 172s Selecting previously unselected package pandoc-data. 172s Preparing to unpack .../161-pandoc-data_3.1.11.1-3build1_all.deb ... 172s Unpacking pandoc-data (3.1.11.1-3build1) ... 172s Selecting previously unselected package pandoc. 172s Preparing to unpack .../162-pandoc_3.1.11.1+ds-4_amd64.deb ... 172s Unpacking pandoc (3.1.11.1+ds-4) ... 172s Selecting previously unselected package zip. 172s Preparing to unpack .../163-zip_3.0-15ubuntu3_amd64.deb ... 172s Unpacking zip (3.0-15ubuntu3) ... 172s Selecting previously unselected package unzip. 172s Preparing to unpack .../164-unzip_6.0-29ubuntu1_amd64.deb ... 172s Unpacking unzip (6.0-29ubuntu1) ... 172s Selecting previously unselected package xdg-utils. 172s Preparing to unpack .../165-xdg-utils_1.2.1-2ubuntu2_all.deb ... 172s Unpacking xdg-utils (1.2.1-2ubuntu2) ... 172s Selecting previously unselected package r-base-core. 172s Preparing to unpack .../166-r-base-core_4.5.2-1ubuntu2_amd64.deb ... 172s Unpacking r-base-core (4.5.2-1ubuntu2) ... 172s Selecting previously unselected package liblzma-dev:amd64. 172s Preparing to unpack .../167-liblzma-dev_5.8.2-2_amd64.deb ... 172s Unpacking liblzma-dev:amd64 (5.8.2-2) ... 172s Selecting previously unselected package libtirpc-dev:amd64. 172s Preparing to unpack .../168-libtirpc-dev_1.3.6+ds-1_amd64.deb ... 172s Unpacking libtirpc-dev:amd64 (1.3.6+ds-1) ... 172s Selecting previously unselected package r-base-dev. 172s Preparing to unpack .../169-r-base-dev_4.5.2-1ubuntu2_all.deb ... 172s Unpacking r-base-dev (4.5.2-1ubuntu2) ... 172s Selecting previously unselected package pkg-r-autopkgtest. 172s Preparing to unpack .../170-pkg-r-autopkgtest_20250812_all.deb ... 172s Unpacking pkg-r-autopkgtest (20250812) ... 172s Selecting previously unselected package r-bioc-biocgenerics. 172s Preparing to unpack .../171-r-bioc-biocgenerics_0.52.0-2_all.deb ... 172s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 172s Selecting previously unselected package r-bioc-biobase. 172s Preparing to unpack .../172-r-bioc-biobase_2.66.0-2_amd64.deb ... 172s Unpacking r-bioc-biobase (2.66.0-2) ... 172s Selecting previously unselected package r-bioc-s4vectors. 172s Preparing to unpack .../173-r-bioc-s4vectors_0.44.0+dfsg-2_amd64.deb ... 172s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 173s Selecting previously unselected package r-bioc-iranges. 173s Preparing to unpack .../174-r-bioc-iranges_2.40.1-3_amd64.deb ... 173s Unpacking r-bioc-iranges (2.40.1-3) ... 173s Selecting previously unselected package r-cran-dbi. 173s Preparing to unpack .../175-r-cran-dbi_1.2.3-1build1_all.deb ... 173s Unpacking r-cran-dbi (1.2.3-1build1) ... 173s Selecting previously unselected package r-cran-bit. 173s Preparing to unpack .../176-r-cran-bit_4.6.0+dfsg-1_amd64.deb ... 173s Unpacking r-cran-bit (4.6.0+dfsg-1) ... 173s Selecting previously unselected package r-cran-bit64. 173s Preparing to unpack .../177-r-cran-bit64_4.6.0-1-4_amd64.deb ... 173s Unpacking r-cran-bit64 (4.6.0-1-4) ... 173s Selecting previously unselected package r-cran-rlang. 173s Preparing to unpack .../178-r-cran-rlang_1.1.5-3_amd64.deb ... 173s Unpacking r-cran-rlang (1.1.5-3) ... 173s Selecting previously unselected package r-cran-cli. 173s Preparing to unpack .../179-r-cran-cli_3.6.4-1_amd64.deb ... 173s Unpacking r-cran-cli (3.6.4-1) ... 173s Selecting previously unselected package r-cran-glue. 173s Preparing to unpack .../180-r-cran-glue_1.8.0-1_amd64.deb ... 173s Unpacking r-cran-glue (1.8.0-1) ... 173s Selecting previously unselected package r-cran-lifecycle. 173s Preparing to unpack .../181-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ... 173s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ... 173s Selecting previously unselected package r-cran-vctrs. 173s Preparing to unpack .../182-r-cran-vctrs_0.6.5-1_amd64.deb ... 173s Unpacking r-cran-vctrs (0.6.5-1) ... 173s Selecting previously unselected package r-cran-blob. 173s Preparing to unpack .../183-r-cran-blob_1.3.0-1_all.deb ... 173s Unpacking r-cran-blob (1.3.0-1) ... 173s Selecting previously unselected package r-cran-fastmap. 173s Preparing to unpack .../184-r-cran-fastmap_1.2.0-1_amd64.deb ... 173s Unpacking r-cran-fastmap (1.2.0-1) ... 173s Selecting previously unselected package r-cran-cachem. 173s Preparing to unpack .../185-r-cran-cachem_1.1.0-1_amd64.deb ... 173s Unpacking r-cran-cachem (1.1.0-1) ... 173s Selecting previously unselected package r-cran-memoise. 173s Preparing to unpack .../186-r-cran-memoise_2.0.1-1build1_all.deb ... 173s Unpacking r-cran-memoise (2.0.1-1build1) ... 173s Selecting previously unselected package r-cran-pkgconfig. 173s Preparing to unpack .../187-r-cran-pkgconfig_2.0.3-2build2_all.deb ... 173s Unpacking r-cran-pkgconfig (2.0.3-2build2) ... 173s Selecting previously unselected package r-cran-plogr. 173s Preparing to unpack .../188-r-cran-plogr_0.2.0-3build2_all.deb ... 173s Unpacking r-cran-plogr (0.2.0-3build2) ... 173s Selecting previously unselected package r-cran-cpp11. 173s Preparing to unpack .../189-r-cran-cpp11_0.5.3-1_all.deb ... 173s Unpacking r-cran-cpp11 (0.5.3-1) ... 173s Selecting previously unselected package r-cran-rsqlite. 173s Preparing to unpack .../190-r-cran-rsqlite_2.3.9-1_amd64.deb ... 173s Unpacking r-cran-rsqlite (2.3.9-1) ... 173s Selecting previously unselected package r-cran-curl. 173s Preparing to unpack .../191-r-cran-curl_7.0.0+dfsg-1_amd64.deb ... 173s Unpacking r-cran-curl (7.0.0+dfsg-1) ... 173s Selecting previously unselected package r-cran-jsonlite. 173s Preparing to unpack .../192-r-cran-jsonlite_1.9.1+dfsg-1_amd64.deb ... 173s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 173s Selecting previously unselected package r-cran-mime. 173s Preparing to unpack .../193-r-cran-mime_0.12-2_amd64.deb ... 173s Unpacking r-cran-mime (0.12-2) ... 173s Selecting previously unselected package r-cran-sys. 173s Preparing to unpack .../194-r-cran-sys_3.4.3-1_amd64.deb ... 173s Unpacking r-cran-sys (3.4.3-1) ... 173s Selecting previously unselected package r-cran-askpass. 173s Preparing to unpack .../195-r-cran-askpass_1.2.1-1_amd64.deb ... 173s Unpacking r-cran-askpass (1.2.1-1) ... 173s Selecting previously unselected package r-cran-openssl. 173s Preparing to unpack .../196-r-cran-openssl_2.3.2+dfsg-1_amd64.deb ... 173s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 173s Selecting previously unselected package r-cran-r6. 173s Preparing to unpack .../197-r-cran-r6_2.6.1-1_all.deb ... 173s Unpacking r-cran-r6 (2.6.1-1) ... 173s Selecting previously unselected package r-cran-httr. 173s Preparing to unpack .../198-r-cran-httr_1.4.7+dfsg-1_all.deb ... 173s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 173s Selecting previously unselected package r-cran-png. 173s Preparing to unpack .../199-r-cran-png_0.1-8-1build2_amd64.deb ... 173s Unpacking r-cran-png (0.1-8-1build2) ... 173s Selecting previously unselected package r-bioc-zlibbioc. 173s Preparing to unpack .../200-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 173s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 173s Selecting previously unselected package r-bioc-xvector. 173s Preparing to unpack .../201-r-bioc-xvector_0.46.0-2_amd64.deb ... 173s Unpacking r-bioc-xvector (0.46.0-2) ... 173s Selecting previously unselected package r-bioc-ucsc.utils. 173s Preparing to unpack .../202-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 173s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 173s Selecting previously unselected package r-bioc-genomeinfodbdata. 173s Preparing to unpack .../203-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 173s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 173s Selecting previously unselected package r-bioc-genomeinfodb. 173s Preparing to unpack .../204-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 173s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 173s Selecting previously unselected package r-cran-crayon. 173s Preparing to unpack .../205-r-cran-crayon_1.5.3-1_all.deb ... 173s Unpacking r-cran-crayon (1.5.3-1) ... 173s Selecting previously unselected package r-bioc-biostrings. 173s Preparing to unpack .../206-r-bioc-biostrings_2.74.1+dfsg-2_amd64.deb ... 173s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 173s Selecting previously unselected package r-bioc-keggrest. 173s Preparing to unpack .../207-r-bioc-keggrest_1.46.0+dfsg-3_all.deb ... 173s Unpacking r-bioc-keggrest (1.46.0+dfsg-3) ... 173s Selecting previously unselected package r-bioc-annotationdbi. 173s Preparing to unpack .../208-r-bioc-annotationdbi_1.68.0-2_all.deb ... 173s Unpacking r-bioc-annotationdbi (1.68.0-2) ... 173s Selecting previously unselected package r-cran-xml. 173s Preparing to unpack .../209-r-cran-xml_3.99-0.20-1_amd64.deb ... 173s Unpacking r-cran-xml (3.99-0.20-1) ... 173s Selecting previously unselected package r-cran-xtable. 173s Preparing to unpack .../210-r-cran-xtable_1%3a1.8-4-2build1_all.deb ... 173s Unpacking r-cran-xtable (1:1.8-4-2build1) ... 173s Selecting previously unselected package r-bioc-annotate. 173s Preparing to unpack .../211-r-bioc-annotate_1.84.0+dfsg-2_all.deb ... 173s Unpacking r-bioc-annotate (1.84.0+dfsg-2) ... 173s Selecting previously unselected package r-bioc-assorthead. 173s Preparing to unpack .../212-r-bioc-assorthead_1.0.1+ds-2_all.deb ... 173s Unpacking r-bioc-assorthead (1.0.1+ds-2) ... 173s Selecting previously unselected package r-cran-lattice. 173s Preparing to unpack .../213-r-cran-lattice_0.22-7-1_amd64.deb ... 173s Unpacking r-cran-lattice (0.22-7-1) ... 173s Selecting previously unselected package r-cran-matrix. 173s Preparing to unpack .../214-r-cran-matrix_1.7-4-1_amd64.deb ... 173s Unpacking r-cran-matrix (1.7-4-1) ... 174s Selecting previously unselected package r-cran-matrixstats. 174s Preparing to unpack .../215-r-cran-matrixstats_1.5.0-1_amd64.deb ... 174s Unpacking r-cran-matrixstats (1.5.0-1) ... 174s Selecting previously unselected package r-bioc-matrixgenerics. 174s Preparing to unpack .../216-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 174s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 174s Selecting previously unselected package r-cran-abind. 174s Preparing to unpack .../217-r-cran-abind_1.4-8-1build1_all.deb ... 174s Unpacking r-cran-abind (1.4-8-1build1) ... 174s Selecting previously unselected package r-bioc-s4arrays. 174s Preparing to unpack .../218-r-bioc-s4arrays_1.6.0+dfsg-2_amd64.deb ... 174s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 174s Selecting previously unselected package r-bioc-sparsearray. 174s Preparing to unpack .../219-r-bioc-sparsearray_1.6.2+dfsg-2_amd64.deb ... 174s Unpacking r-bioc-sparsearray (1.6.2+dfsg-2) ... 174s Selecting previously unselected package r-bioc-delayedarray. 174s Preparing to unpack .../220-r-bioc-delayedarray_0.32.0+dfsg-2_amd64.deb ... 174s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 174s Selecting previously unselected package r-cran-littler. 174s Preparing to unpack .../221-r-cran-littler_0.3.22-1_amd64.deb ... 174s Unpacking r-cran-littler (0.3.22-1) ... 174s Selecting previously unselected package r-cran-pkgkitten. 174s Preparing to unpack .../222-r-cran-pkgkitten_0.2.4-1_all.deb ... 174s Unpacking r-cran-pkgkitten (0.2.4-1) ... 174s Selecting previously unselected package r-cran-rcpp. 174s Preparing to unpack .../223-r-cran-rcpp_1.1.0-1_amd64.deb ... 174s Unpacking r-cran-rcpp (1.1.0-1) ... 174s Selecting previously unselected package r-bioc-beachmat. 174s Preparing to unpack .../224-r-bioc-beachmat_2.22.0+ds-3_amd64.deb ... 174s Unpacking r-bioc-beachmat (2.22.0+ds-3) ... 174s Selecting previously unselected package r-bioc-biocio. 174s Preparing to unpack .../225-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 174s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 174s Selecting previously unselected package r-cran-formatr. 174s Preparing to unpack .../226-r-cran-formatr_1.14-2_all.deb ... 174s Unpacking r-cran-formatr (1.14-2) ... 174s Selecting previously unselected package r-cran-lambda.r. 174s Preparing to unpack .../227-r-cran-lambda.r_1.2.4-2build2_all.deb ... 174s Unpacking r-cran-lambda.r (1.2.4-2build2) ... 174s Selecting previously unselected package r-cran-futile.options. 174s Preparing to unpack .../228-r-cran-futile.options_1.0.1-3build2_all.deb ... 174s Unpacking r-cran-futile.options (1.0.1-3build2) ... 174s Selecting previously unselected package r-cran-futile.logger. 174s Preparing to unpack .../229-r-cran-futile.logger_1.4.3-4build2_all.deb ... 174s Unpacking r-cran-futile.logger (1.4.3-4build2) ... 174s Selecting previously unselected package r-cran-snow. 174s Preparing to unpack .../230-r-cran-snow_1%3a0.4.4-2build1_all.deb ... 174s Unpacking r-cran-snow (1:0.4.4-2build1) ... 174s Selecting previously unselected package r-cran-codetools. 174s Preparing to unpack .../231-r-cran-codetools_0.2-20-1build1_all.deb ... 174s Unpacking r-cran-codetools (0.2-20-1build1) ... 174s Selecting previously unselected package r-cran-bh. 174s Preparing to unpack .../232-r-cran-bh_1.84.0-1_all.deb ... 174s Unpacking r-cran-bh (1.84.0-1) ... 174s Selecting previously unselected package r-bioc-biocparallel. 174s Preparing to unpack .../233-r-bioc-biocparallel_1.40.0-2_amd64.deb ... 174s Unpacking r-bioc-biocparallel (1.40.0-2) ... 174s Selecting previously unselected package r-bioc-genomicranges. 174s Preparing to unpack .../234-r-bioc-genomicranges_1.58.0+dfsg-2_amd64.deb ... 174s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 174s Selecting previously unselected package r-cran-bitops. 174s Preparing to unpack .../235-r-cran-bitops_1.0-9-1_amd64.deb ... 174s Unpacking r-cran-bitops (1.0-9-1) ... 174s Selecting previously unselected package r-bioc-rhtslib. 174s Preparing to unpack .../236-r-bioc-rhtslib_3.2.0+dfsg-2_amd64.deb ... 174s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 174s Selecting previously unselected package r-bioc-rsamtools. 174s Preparing to unpack .../237-r-bioc-rsamtools_2.22.0+dfsg-2_amd64.deb ... 174s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 174s Selecting previously unselected package r-bioc-summarizedexperiment. 174s Preparing to unpack .../238-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 174s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 174s Selecting previously unselected package r-bioc-genomicalignments. 174s Preparing to unpack .../239-r-bioc-genomicalignments_1.42.0-2_amd64.deb ... 174s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 174s Selecting previously unselected package r-cran-rcurl. 174s Preparing to unpack .../240-r-cran-rcurl_1.98-1.16+dfsg-1_amd64.deb ... 174s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 174s Selecting previously unselected package r-cran-rjson. 174s Preparing to unpack .../241-r-cran-rjson_0.2.23-1_amd64.deb ... 174s Unpacking r-cran-rjson (0.2.23-1) ... 174s Selecting previously unselected package r-cran-yaml. 174s Preparing to unpack .../242-r-cran-yaml_2.3.10-1_amd64.deb ... 174s Unpacking r-cran-yaml (2.3.10-1) ... 174s Selecting previously unselected package r-cran-restfulr. 174s Preparing to unpack .../243-r-cran-restfulr_0.0.15-1_amd64.deb ... 174s Unpacking r-cran-restfulr (0.0.15-1) ... 174s Selecting previously unselected package r-bioc-rtracklayer. 174s Preparing to unpack .../244-r-bioc-rtracklayer_1.66.0-3_amd64.deb ... 174s Unpacking r-bioc-rtracklayer (1.66.0-3) ... 174s Selecting previously unselected package r-bioc-bsgenome. 174s Preparing to unpack .../245-r-bioc-bsgenome_1.74.0-2_all.deb ... 174s Unpacking r-bioc-bsgenome (1.74.0-2) ... 174s Selecting previously unselected package r-cran-farver. 174s Preparing to unpack .../246-r-cran-farver_2.1.2-1_amd64.deb ... 174s Unpacking r-cran-farver (2.1.2-1) ... 174s Selecting previously unselected package r-cran-labeling. 174s Preparing to unpack .../247-r-cran-labeling_0.4.3-1_all.deb ... 174s Unpacking r-cran-labeling (0.4.3-1) ... 174s Selecting previously unselected package r-cran-rcolorbrewer. 174s Preparing to unpack .../248-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ... 174s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ... 174s Selecting previously unselected package r-cran-viridislite. 175s Preparing to unpack .../249-r-cran-viridislite_0.4.3-1_all.deb ... 175s Unpacking r-cran-viridislite (0.4.3-1) ... 175s Selecting previously unselected package r-cran-scales. 175s Preparing to unpack .../250-r-cran-scales_1.4.0-1_all.deb ... 175s Unpacking r-cran-scales (1.4.0-1) ... 175s Selecting previously unselected package r-cran-locfit. 175s Preparing to unpack .../251-r-cran-locfit_1.5-9.12-1_amd64.deb ... 175s Unpacking r-cran-locfit (1.5-9.12-1) ... 175s Selecting previously unselected package r-cran-gtools. 175s Preparing to unpack .../252-r-cran-gtools_3.9.5-1build1_amd64.deb ... 175s Unpacking r-cran-gtools (3.9.5-1build1) ... 175s Selecting previously unselected package r-cran-data.table. 175s Preparing to unpack .../253-r-cran-data.table_1.17.0+dfsg-1_amd64.deb ... 175s Unpacking r-cran-data.table (1.17.0+dfsg-1) ... 175s Selecting previously unselected package r-cran-r.methodss3. 175s Preparing to unpack .../254-r-cran-r.methodss3_1.8.2-1_all.deb ... 175s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 175s Selecting previously unselected package r-cran-r.oo. 175s Preparing to unpack .../255-r-cran-r.oo_1.27.1-1_all.deb ... 175s Unpacking r-cran-r.oo (1.27.1-1) ... 175s Selecting previously unselected package r-cran-r.utils. 175s Preparing to unpack .../256-r-cran-r.utils_2.13.0-1_all.deb ... 175s Unpacking r-cran-r.utils (2.13.0-1) ... 175s Selecting previously unselected package r-bioc-sparsematrixstats. 175s Preparing to unpack .../257-r-bioc-sparsematrixstats_1.18.0+dfsg-2_amd64.deb ... 175s Unpacking r-bioc-sparsematrixstats (1.18.0+dfsg-2) ... 175s Selecting previously unselected package r-bioc-delayedmatrixstats. 175s Preparing to unpack .../258-r-bioc-delayedmatrixstats_1.28.1+ds-1_all.deb ... 175s Unpacking r-bioc-delayedmatrixstats (1.28.1+ds-1) ... 175s Selecting previously unselected package r-cran-permute. 175s Preparing to unpack .../259-r-cran-permute_0.9-8-1_all.deb ... 175s Unpacking r-cran-permute (0.9-8-1) ... 175s Selecting previously unselected package r-cran-statmod. 175s Preparing to unpack .../260-r-cran-statmod_1.5.0-1_amd64.deb ... 175s Unpacking r-cran-statmod (1.5.0-1) ... 175s Selecting previously unselected package r-bioc-limma. 175s Preparing to unpack .../261-r-bioc-limma_3.62.2+dfsg-1_amd64.deb ... 175s Unpacking r-bioc-limma (3.62.2+dfsg-1) ... 175s Selecting previously unselected package r-bioc-rhdf5lib. 175s Preparing to unpack .../262-r-bioc-rhdf5lib_1.28.0+dfsg-3_amd64.deb ... 175s Unpacking r-bioc-rhdf5lib (1.28.0+dfsg-3) ... 175s Selecting previously unselected package r-bioc-rhdf5filters. 175s Preparing to unpack .../263-r-bioc-rhdf5filters_1.18.1+dfsg-1_amd64.deb ... 175s Unpacking r-bioc-rhdf5filters (1.18.1+dfsg-1) ... 175s Selecting previously unselected package r-bioc-rhdf5. 175s Preparing to unpack .../264-r-bioc-rhdf5_2.50.2+dfsg-1build1_amd64.deb ... 175s Unpacking r-bioc-rhdf5 (2.50.2+dfsg-1build1) ... 175s Selecting previously unselected package r-bioc-hdf5array. 175s Preparing to unpack .../265-r-bioc-hdf5array_1.34.0-2build1_amd64.deb ... 175s Unpacking r-bioc-hdf5array (1.34.0-2build1) ... 175s Selecting previously unselected package r-bioc-bsseq. 175s Preparing to unpack .../266-r-bioc-bsseq_1.42.0+dfsg-2_amd64.deb ... 175s Unpacking r-bioc-bsseq (1.42.0+dfsg-2) ... 175s Selecting previously unselected package r-cran-evaluate. 175s Preparing to unpack .../267-r-cran-evaluate_1.0.5-1_all.deb ... 175s Unpacking r-cran-evaluate (1.0.5-1) ... 175s Selecting previously unselected package r-cran-xfun. 175s Preparing to unpack .../268-r-cran-xfun_0.55+dfsg-1_amd64.deb ... 175s Unpacking r-cran-xfun (0.55+dfsg-1) ... 175s Selecting previously unselected package r-cran-highr. 175s Preparing to unpack .../269-r-cran-highr_0.11+dfsg-1_all.deb ... 175s Unpacking r-cran-highr (0.11+dfsg-1) ... 175s Selecting previously unselected package libjs-mathjax. 175s Preparing to unpack .../270-libjs-mathjax_2.7.9+dfsg-1build1_all.deb ... 175s Unpacking libjs-mathjax (2.7.9+dfsg-1build1) ... 175s Selecting previously unselected package r-cran-knitr. 175s Preparing to unpack .../271-r-cran-knitr_1.51+dfsg-1_all.deb ... 175s Unpacking r-cran-knitr (1.51+dfsg-1) ... 175s Selecting previously unselected package r-cran-mass. 175s Preparing to unpack .../272-r-cran-mass_7.3-65-1_amd64.deb ... 175s Unpacking r-cran-mass (7.3-65-1) ... 175s Selecting previously unselected package r-cran-kernsmooth. 175s Preparing to unpack .../273-r-cran-kernsmooth_2.23-26-1build1_amd64.deb ... 175s Unpacking r-cran-kernsmooth (2.23-26-1build1) ... 175s Selecting previously unselected package r-cran-matrixcalc. 175s Preparing to unpack .../274-r-cran-matrixcalc_1.0.6-2_all.deb ... 175s Unpacking r-cran-matrixcalc (1.0.6-2) ... 175s Selecting previously unselected package r-cran-base64enc. 175s Preparing to unpack .../275-r-cran-base64enc_0.1-3-3build1_amd64.deb ... 175s Unpacking r-cran-base64enc (0.1-3-3build1) ... 175s Selecting previously unselected package r-cran-digest. 175s Preparing to unpack .../276-r-cran-digest_0.6.39-1_amd64.deb ... 175s Unpacking r-cran-digest (0.6.39-1) ... 175s Selecting previously unselected package r-cran-htmltools. 175s Preparing to unpack .../277-r-cran-htmltools_0.5.8.1-1_amd64.deb ... 175s Unpacking r-cran-htmltools (0.5.8.1-1) ... 175s Selecting previously unselected package r-cran-jquerylib. 175s Preparing to unpack .../278-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ... 175s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ... 175s Selecting previously unselected package r-cran-fs. 175s Preparing to unpack .../279-r-cran-fs_1.6.5+dfsg-1_amd64.deb ... 175s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 175s Selecting previously unselected package r-cran-rappdirs. 175s Preparing to unpack .../280-r-cran-rappdirs_0.3.3-1build1_amd64.deb ... 175s Unpacking r-cran-rappdirs (0.3.3-1build1) ... 175s Selecting previously unselected package r-cran-sass. 175s Preparing to unpack .../281-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... 175s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 175s Selecting previously unselected package r-cran-bslib. 175s Preparing to unpack .../282-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ... 175s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ... 176s Selecting previously unselected package r-cran-fontawesome. 176s Preparing to unpack .../283-r-cran-fontawesome_0.5.3-1_all.deb ... 176s Unpacking r-cran-fontawesome (0.5.3-1) ... 176s Selecting previously unselected package r-cran-tinytex. 176s Preparing to unpack .../284-r-cran-tinytex_0.58-1_all.deb ... 176s Unpacking r-cran-tinytex (0.58-1) ... 176s Selecting previously unselected package libjs-modernizr. 176s Preparing to unpack .../285-libjs-modernizr_3.13.0-0.1build1_all.deb ... 176s Unpacking libjs-modernizr (3.13.0-0.1build1) ... 176s Selecting previously unselected package r-cran-later. 176s Preparing to unpack .../286-r-cran-later_1.4.1+dfsg-1_amd64.deb ... 176s Unpacking r-cran-later (1.4.1+dfsg-1) ... 176s Selecting previously unselected package r-cran-magrittr. 176s Preparing to unpack .../287-r-cran-magrittr_2.0.3-1_amd64.deb ... 176s Unpacking r-cran-magrittr (2.0.3-1) ... 176s Selecting previously unselected package r-cran-promises. 176s Preparing to unpack .../288-r-cran-promises_1.3.2+dfsg-1_amd64.deb ... 176s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 176s Selecting previously unselected package r-cran-httpuv. 176s Preparing to unpack .../289-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... 176s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 176s Selecting previously unselected package r-cran-sourcetools. 176s Preparing to unpack .../290-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... 176s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 176s Selecting previously unselected package r-cran-withr. 176s Preparing to unpack .../291-r-cran-withr_3.0.2+dfsg-1_all.deb ... 176s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 176s Selecting previously unselected package r-cran-commonmark. 176s Preparing to unpack .../292-r-cran-commonmark_1.9.5-1_amd64.deb ... 176s Unpacking r-cran-commonmark (1.9.5-1) ... 176s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 176s Preparing to unpack .../293-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 176s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 176s Selecting previously unselected package r-cran-shiny. 176s Preparing to unpack .../294-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 176s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 176s Selecting previously unselected package r-cran-rmarkdown. 176s Preparing to unpack .../295-r-cran-rmarkdown_2.30+dfsg-1_all.deb ... 176s Unpacking r-cran-rmarkdown (2.30+dfsg-1) ... 176s Selecting previously unselected package r-bioc-dss. 176s Preparing to unpack .../296-r-bioc-dss_2.54.0+dfsg-2_amd64.deb ... 176s Unpacking r-bioc-dss (2.54.0+dfsg-2) ... 176s Selecting previously unselected package r-cran-gtable. 176s Preparing to unpack .../297-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 176s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 176s Selecting previously unselected package r-cran-isoband. 176s Preparing to unpack .../298-r-cran-isoband_0.2.7-1_amd64.deb ... 176s Unpacking r-cran-isoband (0.2.7-1) ... 176s Selecting previously unselected package r-cran-s7. 176s Preparing to unpack .../299-r-cran-s7_0.2.0-1_amd64.deb ... 176s Unpacking r-cran-s7 (0.2.0-1) ... 176s Selecting previously unselected package r-cran-ggplot2. 176s Preparing to unpack .../300-r-cran-ggplot2_4.0.2+dfsg-1_all.deb ... 176s Unpacking r-cran-ggplot2 (4.0.2+dfsg-1) ... 176s Selecting previously unselected package r-cran-gridextra. 176s Preparing to unpack .../301-r-cran-gridextra_2.3-3build2_all.deb ... 176s Unpacking r-cran-gridextra (2.3-3build2) ... 176s Selecting previously unselected package r-cran-viridis. 176s Preparing to unpack .../302-r-cran-viridis_0.6.5-1_all.deb ... 176s Unpacking r-cran-viridis (0.6.5-1) ... 176s Selecting previously unselected package r-cran-dendextend. 176s Preparing to unpack .../303-r-cran-dendextend_1.19.1+dfsg-1_all.deb ... 176s Unpacking r-cran-dendextend (1.19.1+dfsg-1) ... 176s Selecting previously unselected package r-cran-mnormt. 176s Preparing to unpack .../304-r-cran-mnormt_2.1.2-1_amd64.deb ... 176s Unpacking r-cran-mnormt (2.1.2-1) ... 176s Selecting previously unselected package r-cran-nlme. 176s Preparing to unpack .../305-r-cran-nlme_3.1.168-1_amd64.deb ... 176s Unpacking r-cran-nlme (3.1.168-1) ... 176s Selecting previously unselected package r-cran-gparotation. 176s Preparing to unpack .../306-r-cran-gparotation_2025.3-1-1_all.deb ... 176s Unpacking r-cran-gparotation (2025.3-1-1) ... 176s Selecting previously unselected package r-cran-psych. 176s Preparing to unpack .../307-r-cran-psych_2.4.12-1_all.deb ... 176s Unpacking r-cran-psych (2.4.12-1) ... 176s Selecting previously unselected package r-cran-mgcv. 176s Preparing to unpack .../308-r-cran-mgcv_1.9-4-1_amd64.deb ... 176s Unpacking r-cran-mgcv (1.9-4-1) ... 176s Selecting previously unselected package r-cran-survival. 176s Preparing to unpack .../309-r-cran-survival_3.8-6-1_amd64.deb ... 176s Unpacking r-cran-survival (3.8-6-1) ... 176s Selecting previously unselected package r-bioc-genefilter. 176s Preparing to unpack .../310-r-bioc-genefilter_1.88.0-2_amd64.deb ... 176s Unpacking r-bioc-genefilter (1.88.0-2) ... 176s Selecting previously unselected package r-bioc-edger. 176s Preparing to unpack .../311-r-bioc-edger_4.4.2+dfsg-1_amd64.deb ... 176s Unpacking r-bioc-edger (4.4.2+dfsg-1) ... 176s Selecting previously unselected package r-bioc-sva. 176s Preparing to unpack .../312-r-bioc-sva_3.54.0-2_amd64.deb ... 176s Unpacking r-bioc-sva (3.54.0-2) ... 176s Selecting previously unselected package r-cran-evd. 176s Preparing to unpack .../313-r-cran-evd_2.3-7.1-1_amd64.deb ... 176s Unpacking r-cran-evd (2.3-7.1-1) ... 176s Selecting previously unselected package r-cran-truncdist. 176s Preparing to unpack .../314-r-cran-truncdist_1.0-2-4build2_all.deb ... 176s Unpacking r-cran-truncdist (1.0-2-4build2) ... 176s Selecting previously unselected package r-bioc-demixt. 176s 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r-cran-survival (3.8-6-1) ... 179s Setting up r-bioc-biocio (1.16.0+dfsg-2) ... 179s Setting up r-cran-r.oo (1.27.1-1) ... 179s Setting up r-bioc-rhdf5filters (1.18.1+dfsg-1) ... 179s Setting up r-cran-jquerylib (0.1.4+dfsg-5) ... 179s Setting up r-cran-psych (2.4.12-1) ... 179s Setting up r-cran-httr (1.4.7+dfsg-1) ... 179s Setting up r-cran-gridextra (2.3-3build2) ... 179s Setting up r-cran-memoise (2.0.1-1build1) ... 179s Setting up r-cran-promises (1.3.2+dfsg-1) ... 179s Setting up r-cran-blob (1.3.0-1) ... 179s Setting up pkg-r-autopkgtest (20250812) ... 179s Setting up r-bioc-xvector (0.46.0-2) ... 179s Setting up r-cran-rsqlite (2.3.9-1) ... 179s Setting up r-cran-r.utils (2.13.0-1) ... 179s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 179s Setting up r-bioc-sparsearray (1.6.2+dfsg-2) ... 179s Setting up r-bioc-rhdf5 (2.50.2+dfsg-1build1) ... 179s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 179s Setting up r-cran-viridis (0.6.5-1) ... 179s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 179s Setting up r-cran-bslib (0.9.0+dfsg-3build1) ... 179s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 179s Setting up r-bioc-hdf5array (1.34.0-2build1) ... 179s Setting up r-cran-dendextend (1.19.1+dfsg-1) ... 179s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 179s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 179s Setting up r-bioc-delayedmatrixstats (1.28.1+ds-1) ... 179s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 179s Setting up r-cran-rmarkdown (2.30+dfsg-1) ... 179s Setting up r-bioc-beachmat (2.22.0+ds-3) ... 179s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 179s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 179s Setting up r-bioc-keggrest (1.46.0+dfsg-3) ... 179s Setting up r-bioc-annotationdbi (1.68.0-2) ... 179s Setting up r-bioc-annotate (1.84.0+dfsg-2) ... 179s Setting up r-bioc-genefilter (1.88.0-2) ... 179s Setting up r-bioc-genomicalignments (1.42.0-2) ... 179s Setting up r-bioc-rtracklayer (1.66.0-3) ... 179s Setting up r-bioc-sva (3.54.0-2) ... 179s Setting up r-bioc-bsgenome (1.74.0-2) ... 179s Setting up r-bioc-bsseq (1.42.0+dfsg-2) ... 179s Setting up r-bioc-dss (2.54.0+dfsg-2) ... 179s Setting up r-bioc-demixt (1.22.0-2) ... 179s Processing triggers for install-info (7.2-5) ... 179s Processing triggers for libc-bin (2.42-2ubuntu4) ... 179s Processing triggers for man-db (2.13.1-1build1) ... 181s autopkgtest [04:11:50]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 181s autopkgtest [04:11:50]: test pkg-r-autopkgtest: [----------------------- 181s Test: Try to load the R library DeMixT 181s 181s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble" 181s Copyright (C) 2025 The R Foundation for Statistical Computing 181s Platform: x86_64-pc-linux-gnu 181s 181s R is free software and comes with ABSOLUTELY NO WARRANTY. 181s You are welcome to redistribute it under certain conditions. 181s Type 'license()' or 'licence()' for distribution details. 181s 181s R is a collaborative project with many contributors. 181s Type 'contributors()' for more information and 181s 'citation()' on how to cite R or R packages in publications. 181s 181s Type 'demo()' for some demos, 'help()' for on-line help, or 181s 'help.start()' for an HTML browser interface to help. 181s Type 'q()' to quit R. 181s 181s > library('DeMixT') 181s Loading required package: parallel 181s Loading required package: Rcpp 182s Loading required package: SummarizedExperiment 182s Loading required package: MatrixGenerics 182s Loading required package: matrixStats 182s 182s Attaching package: ‘MatrixGenerics’ 182s 182s The following objects are masked from ‘package:matrixStats’: 182s 182s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 182s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 182s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 182s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 182s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 182s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 182s colWeightedMeans, colWeightedMedians, colWeightedSds, 182s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 182s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 182s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 182s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 182s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 182s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 182s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 182s rowWeightedSds, rowWeightedVars 182s 182s Loading required package: GenomicRanges 182s Loading required package: stats4 182s Loading required package: BiocGenerics 182s 182s Attaching package: ‘BiocGenerics’ 182s 182s The following objects are masked from ‘package:stats’: 182s 182s IQR, mad, sd, var, xtabs 182s 182s The following objects are masked from ‘package:base’: 182s 182s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 182s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 182s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 182s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 182s Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff, 182s table, tapply, union, unique, unsplit, which.max, which.min 182s 182s Loading required package: S4Vectors 182s 182s Attaching package: ‘S4Vectors’ 182s 182s The following object is masked from ‘package:utils’: 182s 182s findMatches 182s 182s The following objects are masked from ‘package:base’: 182s 182s expand.grid, I, unname 182s 182s Loading required package: IRanges 183s Loading required package: GenomeInfoDb 183s Loading required package: Biobase 183s Welcome to Bioconductor 183s 183s Vignettes contain introductory material; view with 183s 'browseVignettes()'. To cite Bioconductor, see 183s 'citation("Biobase")', and for packages 'citation("pkgname")'. 183s 183s 183s Attaching package: ‘Biobase’ 183s 183s The following object is masked from ‘package:MatrixGenerics’: 183s 183s rowMedians 183s 183s The following objects are masked from ‘package:matrixStats’: 183s 183s anyMissing, rowMedians 183s 185s Loading required package: knitr 185s Loading required package: KernSmooth 185s KernSmooth 2.23 loaded 185s Copyright M. P. Wand 1997-2009 185s Loading required package: matrixcalc 185s Loading required package: rmarkdown 185s Loading required package: DSS 185s Loading required package: BiocParallel 185s Loading required package: bsseq 189s Loading required package: dendextend 189s 189s --------------------- 189s Welcome to dendextend version 1.19.1 189s Type citation('dendextend') for how to cite the package. 189s 189s Type browseVignettes(package = 'dendextend') for the package vignette. 189s The github page is: https://github.com/talgalili/dendextend/ 189s 189s Suggestions and bug-reports can be submitted at: https://github.com/talgalili/dendextend/issues 189s You may ask questions at stackoverflow, use the r and dendextend tags: 189s https://stackoverflow.com/questions/tagged/dendextend 189s 189s To suppress this message use: suppressPackageStartupMessages(library(dendextend)) 189s --------------------- 189s 189s 189s Attaching package: ‘dendextend’ 189s 189s The following object is masked from ‘package:stats’: 189s 189s cutree 189s 189s Loading required package: psych 189s 189s Attaching package: ‘psych’ 189s 189s The following object is masked from ‘package:SummarizedExperiment’: 189s 189s distance 189s 189s The following object is masked from ‘package:GenomicRanges’: 189s 189s distance 189s 189s The following objects are masked from ‘package:IRanges’: 189s 189s distance, reflect 189s 189s Loading required package: sva 189s Loading required package: mgcv 189s Loading required package: nlme 189s 189s Attaching package: ‘nlme’ 189s 189s The following object is masked from ‘package:IRanges’: 189s 189s collapse 189s 189s This is mgcv 1.9-4. For overview type '?mgcv'. 189s Loading required package: genefilter 190s 190s Attaching package: ‘genefilter’ 190s 190s The following object is masked from ‘package:psych’: 190s 190s AUC 190s 190s The following objects are masked from ‘package:MatrixGenerics’: 190s 190s rowSds, rowVars 190s 190s The following objects are masked from ‘package:matrixStats’: 190s 190s rowSds, rowVars 190s 190s OpenMP installed. 190s Number of threads = 2 190s Warning messages: 190s 1: replacing previous import ‘ggplot2::%+%’ by ‘psych::%+%’ when loading ‘DeMixT’ 190s 2: replacing previous import ‘SummarizedExperiment::distance’ by ‘psych::distance’ when loading ‘DeMixT’ 190s 3: replacing previous import ‘ggplot2::alpha’ by ‘psych::alpha’ when loading ‘DeMixT’ 190s > 190s find: ‘tests’: No such file or directory 190s autopkgtest [04:11:59]: test pkg-r-autopkgtest: -----------------------] 191s pkg-r-autopkgtest PASS 191s autopkgtest [04:12:00]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 191s autopkgtest [04:12:00]: @@@@@@@@@@@@@@@@@@@@ summary 191s pkg-r-autopkgtest PASS