0s autopkgtest [04:06:53]: starting date and time: 2026-02-10 04:06:53+0000
  0s autopkgtest [04:06:53]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op
  0s autopkgtest [04:06:53]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.bdlmkkgq/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-ggplot2 --apt-upgrade r-bioc-degnorm --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-ggplot2/4.0.2+dfsg-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-amd64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@sto01-12.secgroup --name adt-resolute-amd64-r-bioc-degnorm-20260210-040653-juju-7f2275-prod-proposed-migration-environment-20-40684246-927d-4eac-8b16-73b865022bed --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-autopkgtest-workers-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/
  4s Creating nova instance adt-resolute-amd64-r-bioc-degnorm-20260210-040653-juju-7f2275-prod-proposed-migration-environment-20-40684246-927d-4eac-8b16-73b865022bed from image adt/ubuntu-resolute-amd64-server-20260204.img (UUID fedf54b4-458b-493e-8072-6425c19717b4)...
 74s autopkgtest [04:08:07]: testbed dpkg architecture: amd64
 74s autopkgtest [04:08:07]: testbed apt version: 3.1.14
 74s autopkgtest [04:08:07]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 74s autopkgtest [04:08:07]: testbed release detected to be: None
 75s autopkgtest [04:08:08]: updating testbed package index (apt update)
 75s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB]
 75s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
 75s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
 75s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
 75s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [181 kB]
 75s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1735 kB]
 75s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [31.1 kB]
 75s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [268 kB]
 75s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [220 kB]
 75s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [5980 B]
 76s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [120 B]
 76s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [1791 kB]
 76s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [768 kB]
 76s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [32.6 kB]
 76s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [5020 B]
 76s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [26.4 kB]
 76s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [996 B]
 76s Fetched 5189 kB in 1s (7506 kB/s)
 77s Reading package lists...
 78s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease
 78s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease
 78s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease
 78s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease
 78s Reading package lists...
 79s Reading package lists...
 79s Building dependency tree...
 79s Reading state information...
 79s Calculating upgrade...
 79s The following package was automatically installed and is no longer required:
 79s   libpython3.13
 79s Use 'sudo apt autoremove' to remove it.
 79s The following NEW packages will be installed:
 79s   gcc-16-base libpython3.14 libpython3.14-minimal libpython3.14-stdlib
 79s   linux-headers-6.19.0-3 linux-headers-6.19.0-3-generic
 79s   linux-image-6.19.0-3-generic linux-modules-6.19.0-3-generic
 79s   linux-tools-6.19.0-3 linux-tools-6.19.0-3-generic
 79s The following packages will be upgraded:
 79s   3cpio amd64-microcode apt bpftool busybox-initramfs busybox-static
 79s   cryptsetup-bin dash dbus dbus-bin dbus-daemon dbus-session-bus-common
 79s   dbus-system-bus-common dbus-user-session debianutils dmsetup dracut-install
 79s   ethtool findutils gir1.2-girepository-3.0 gir1.2-glib-2.0 hwdata iproute2
 79s   iptables less libapt-pkg7.0 libatomic1 libattr1 libbpf1 libbsd0
 79s   libcryptsetup12 libdbus-1-3 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common
 79s   libdrm2 libevent-core-2.1-7t64 libgcc-s1 libgdbm-compat4t64 libgdbm6t64
 79s   libgirepository-2.0-0 libglib2.0-0t64 libglib2.0-data libgpm2 libgudev-1.0-0
 79s   libidn2-0 libip4tc2 libip6tc2 libjansson4 libkeyutils1 liblsof0
 79s   libmaxminddb0 libnetfilter-conntrack3 libnpth0t64 libonig5 libpcap0.8t64
 79s   libpci3 libsensors-config libsensors5 libstdc++6 libusb-1.0-0 libwrap0
 79s   libxau6 libxkbcommon0 libxtables12 linux-generic linux-headers-generic
 79s   linux-headers-virtual linux-image-generic linux-image-virtual linux-perf
 79s   linux-tools-common linux-virtual lsof man-db mawk patch pciutils pnp.ids
 79s   pollinate python3-linkify-it python3-markdown-it python3-referencing sed
 79s   shared-mime-info tar tcpdump ubuntu-kernel-accessories ubuntu-standard wget
 79s 90 upgraded, 10 newly installed, 0 to remove and 0 not upgraded.
 79s Need to get 237 MB of archives.
 79s After this operation, 339 MB of additional disk space will be used.
 79s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 debianutils amd64 5.23.2build1 [93.3 kB]
 79s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 dash amd64 0.5.12-12ubuntu3 [96.0 kB]
 79s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 findutils amd64 4.10.0-3build2 [307 kB]
 79s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 sed amd64 4.9-2build3 [195 kB]
 79s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 tar amd64 1.35+dfsg-3.1build2 [257 kB]
 79s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libattr1 amd64 1:2.5.2-3build2 [11.4 kB]
 79s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-16-base amd64 16-20260208-1ubuntu1 [59.7 kB]
 79s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-s1 amd64 16-20260208-1ubuntu1 [80.3 kB]
 79s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libbsd0 amd64 0.12.2-2build2 [42.3 kB]
 79s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 mawk amd64 1.3.4.20260129-1 [133 kB]
 79s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++6 amd64 16-20260208-1ubuntu1 [844 kB]
 79s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libapt-pkg7.0 amd64 3.1.15 [1151 kB]
 80s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 apt amd64 3.1.15 [1479 kB]
 80s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-system-bus-common all 1.16.2-2ubuntu3 [55.8 kB]
 80s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-session-bus-common all 1.16.2-2ubuntu3 [54.4 kB]
 80s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-user-session amd64 1.16.2-2ubuntu3 [9696 B]
 80s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-daemon amd64 1.16.2-2ubuntu3 [119 kB]
 80s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus-bin amd64 1.16.2-2ubuntu3 [40.1 kB]
 80s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 dbus amd64 1.16.2-2ubuntu3 [24.2 kB]
 80s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libdbus-1-3 amd64 1.16.2-2ubuntu3 [185 kB]
 80s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libdevmapper1.02.1 amd64 2:1.02.205-2ubuntu3 [142 kB]
 80s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 dmsetup amd64 2:1.02.205-2ubuntu3 [79.4 kB]
 80s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 ethtool amd64 1:6.15-3build1 [318 kB]
 80s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-girepository-3.0 amd64 2.87.2-2 [25.2 kB]
 80s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libgirepository-2.0-0 amd64 2.87.2-2 [76.1 kB]
 80s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libatomic1 amd64 16-20260208-1ubuntu1 [11.4 kB]
 80s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-glib-2.0 amd64 2.87.2-2 [182 kB]
 80s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-0t64 amd64 2.87.2-2 [1613 kB]
 80s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libbpf1 amd64 1:1.6.2-1build1 [184 kB]
 80s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 iptables amd64 1.8.11-2ubuntu3 [381 kB]
 80s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libip4tc2 amd64 1.8.11-2ubuntu3 [24.2 kB]
 80s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libip6tc2 amd64 1.8.11-2ubuntu3 [24.4 kB]
 80s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 libnetfilter-conntrack3 amd64 1.1.1-1 [47.5 kB]
 80s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 libxtables12 amd64 1.8.11-2ubuntu3 [36.6 kB]
 80s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 iproute2 amd64 6.18.0-1ubuntu1 [1178 kB]
 80s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 less amd64 668-1build1 [172 kB]
 80s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libcryptsetup12 amd64 2:2.8.0-1ubuntu3 [283 kB]
 80s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libglib2.0-data all 2.87.2-2 [58.2 kB]
 80s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libidn2-0 amd64 2.3.8-4build1 [67.6 kB]
 80s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libkeyutils1 amd64 1.6.3-6ubuntu3 [10.6 kB]
 80s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-linkify-it all 2.0.3-1ubuntu3 [19.4 kB]
 80s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-markdown-it all 3.0.0-3build1 [54.4 kB]
 80s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 shared-mime-info amd64 2.4-5build3 [476 kB]
 80s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-static amd64 1:1.37.0-7ubuntu1 [1034 kB]
 80s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-common all 2.4.131-1 [9774 B]
 80s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm2 amd64 2.4.131-1 [42.3 kB]
 80s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm6t64 amd64 1.26-1build1 [36.5 kB]
 80s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libgpm2 amd64 1.20.7-12build1 [14.4 kB]
 80s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libjansson4 amd64 2.14-2build4 [33.2 kB]
 80s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 lsof amd64 4.99.4+dfsg-2build2 [239 kB]
 80s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsof0 amd64 4.99.4+dfsg-2build2 [56.5 kB]
 80s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libmaxminddb0 amd64 1.12.2-1build2 [18.9 kB]
 80s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcap0.8t64 amd64 1.10.5-2ubuntu3 [154 kB]
 80s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 pciutils amd64 1:3.14.0-1build2 [95.5 kB]
 80s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libpci3 amd64 1:3.14.0-1build2 [38.1 kB]
 80s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors-config all 1:3.6.2-2build1 [6862 B]
 80s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libsensors5 amd64 1:3.6.2-2build1 [28.9 kB]
 80s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libusb-1.0-0 amd64 2:1.0.29-2build1 [56.9 kB]
 80s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libxau6 amd64 1:1.0.11-1build2 [7502 B]
 80s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libxkbcommon0 amd64 1.13.1-1 [159 kB]
 80s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 man-db amd64 2.13.1-1build1 [1392 kB]
 80s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 tcpdump amd64 4.99.5-2ubuntu3 [477 kB]
 80s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 wget amd64 1.25.0-2ubuntu4 [353 kB]
 80s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-standard amd64 1.564 [13.3 kB]
 80s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 3cpio amd64 0.14.0-1ubuntu1 [285 kB]
 80s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 bpftool amd64 7.7.0+6.19.0-3.3 [1229 kB]
 80s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 busybox-initramfs amd64 1:1.37.0-7ubuntu1 [191 kB]
 80s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 cryptsetup-bin amd64 2:2.8.0-1ubuntu3 [228 kB]
 80s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 dracut-install amd64 109-11ubuntu1 [45.8 kB]
 80s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 hwdata all 0.394-1build1 [1566 B]
 80s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 pnp.ids all 0.394-1build1 [29.6 kB]
 80s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-amdgpu1 amd64 2.4.131-1 [23.2 kB]
 80s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10build2 [93.1 kB]
 80s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdbm-compat4t64 amd64 1.26-1build1 [6796 B]
 80s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libgudev-1.0-0 amd64 1:238-7build1 [15.9 kB]
 80s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libnpth0t64 amd64 1.8-3build1 [9302 B]
 80s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libonig5 amd64 6.9.10-1build1 [174 kB]
 80s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-minimal amd64 3.14.2-1 [920 kB]
 80s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-stdlib amd64 3.14.2-1 [2398 kB]
 80s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14 amd64 3.14.2-1 [2568 kB]
 80s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 libwrap0 amd64 7.6.q-36build2 [48.5 kB]
 80s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-modules-6.19.0-3-generic amd64 6.19.0-3.3 [171 MB]
 82s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-6.19.0-3-generic amd64 6.19.0-3.3+1 [16.8 MB]
 82s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 amd64-microcode amd64 3.20251202.1ubuntu1 [459 kB]
 82s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-generic amd64 6.19.0-3.3 [1698 B]
 82s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-generic amd64 6.19.0-3.3 [12.2 kB]
 82s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-virtual amd64 6.19.0-3.3 [1700 B]
 82s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-image-virtual amd64 6.19.0-3.3 [12.1 kB]
 82s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-virtual amd64 6.19.0-3.3 [1646 B]
 82s Get:90 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3 all 6.19.0-3.3 [14.9 MB]
 83s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-6.19.0-3-generic amd64 6.19.0-3.3 [4330 kB]
 83s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-headers-generic amd64 6.19.0-3.3 [12.0 kB]
 83s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-perf amd64 6.19.0-3.3 [4480 kB]
 83s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-common all 6.19.0-3.3 [345 kB]
 83s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3 amd64 6.19.0-3.3 [1455 kB]
 83s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-tools-6.19.0-3-generic amd64 6.19.0-3.3 [1612 B]
 83s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 patch amd64 2.8-2build1 [95.7 kB]
 83s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 pollinate all 4.33-4ubuntu5 [14.0 kB]
 83s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-referencing all 0.36.2-1ubuntu2 [22.2 kB]
 83s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 ubuntu-kernel-accessories amd64 1.564 [13.1 kB]
 83s dpkg-preconfigure: unable to re-open stdin: No such file or directory
 83s Fetched 237 MB in 4s (61.2 MB/s)
 83s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83957 files and directories currently installed.)
 83s Preparing to unpack .../debianutils_5.23.2build1_amd64.deb ...
 83s Unpacking debianutils (5.23.2build1) over (5.23.2) ...
 84s Setting up debianutils (5.23.2build1) ...
 84s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83957 files and directories currently installed.)
 84s Preparing to unpack .../dash_0.5.12-12ubuntu3_amd64.deb ...
 84s Unpacking dash (0.5.12-12ubuntu3) over (0.5.12-12ubuntu2) ...
 84s Setting up dash (0.5.12-12ubuntu3) ...
 84s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83957 files and directories currently installed.)
 84s Preparing to unpack .../findutils_4.10.0-3build2_amd64.deb ...
 84s Unpacking findutils (4.10.0-3build2) over (4.10.0-3build1) ...
 84s Setting up findutils (4.10.0-3build2) ...
 84s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83957 files and directories currently installed.)
 84s Preparing to unpack .../sed_4.9-2build3_amd64.deb ...
 84s Unpacking sed (4.9-2build3) over (4.9-2build2) ...
 84s Setting up sed (4.9-2build3) ...
 84s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83957 files and directories currently installed.)
 84s Preparing to unpack .../tar_1.35+dfsg-3.1build2_amd64.deb ...
 84s Unpacking tar (1.35+dfsg-3.1build2) over (1.35+dfsg-3.1build1) ...
 84s Setting up tar (1.35+dfsg-3.1build2) ...
 84s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83957 files and directories currently installed.)
 84s Preparing to unpack .../libattr1_1%3a2.5.2-3build2_amd64.deb ...
 84s Unpacking libattr1:amd64 (1:2.5.2-3build2) over (1:2.5.2-3build1) ...
 84s Setting up libattr1:amd64 (1:2.5.2-3build2) ...
 84s Selecting previously unselected package gcc-16-base:amd64.
 84s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83957 files and directories currently installed.)
 84s Preparing to unpack .../gcc-16-base_16-20260208-1ubuntu1_amd64.deb ...
 84s Unpacking gcc-16-base:amd64 (16-20260208-1ubuntu1) ...
 84s Setting up gcc-16-base:amd64 (16-20260208-1ubuntu1) ...
 84s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83962 files and directories currently installed.)
 84s Preparing to unpack .../libgcc-s1_16-20260208-1ubuntu1_amd64.deb ...
 84s Unpacking libgcc-s1:amd64 (16-20260208-1ubuntu1) over (15.2.0-12ubuntu1) ...
 84s Setting up libgcc-s1:amd64 (16-20260208-1ubuntu1) ...
 84s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 83962 files and directories currently installed.)
 84s Preparing to unpack .../00-libbsd0_0.12.2-2build2_amd64.deb ...
 84s Unpacking libbsd0:amd64 (0.12.2-2build2) over (0.12.2-2build1) ...
 85s Preparing to unpack .../01-mawk_1.3.4.20260129-1_amd64.deb ...
 85s Unpacking mawk (1.3.4.20260129-1) over (1.3.4.20250131-2) ...
 85s Preparing to unpack .../02-libstdc++6_16-20260208-1ubuntu1_amd64.deb ...
 85s Unpacking libstdc++6:amd64 (16-20260208-1ubuntu1) over (15.2.0-12ubuntu1) ...
 85s Preparing to unpack .../03-libapt-pkg7.0_3.1.15_amd64.deb ...
 85s Unpacking libapt-pkg7.0:amd64 (3.1.15) over (3.1.14) ...
 85s Preparing to unpack .../04-apt_3.1.15_amd64.deb ...
 85s Unpacking apt (3.1.15) over (3.1.14) ...
 85s Preparing to unpack .../05-dbus-system-bus-common_1.16.2-2ubuntu3_all.deb ...
 85s Unpacking dbus-system-bus-common (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ...
 85s Preparing to unpack .../06-dbus-session-bus-common_1.16.2-2ubuntu3_all.deb ...
 85s Unpacking dbus-session-bus-common (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ...
 85s Preparing to unpack .../07-dbus-user-session_1.16.2-2ubuntu3_amd64.deb ...
 85s Unpacking dbus-user-session (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ...
 85s Preparing to unpack .../08-dbus-daemon_1.16.2-2ubuntu3_amd64.deb ...
 85s Unpacking dbus-daemon (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ...
 85s Preparing to unpack .../09-dbus-bin_1.16.2-2ubuntu3_amd64.deb ...
 85s Unpacking dbus-bin (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ...
 85s Preparing to unpack .../10-dbus_1.16.2-2ubuntu3_amd64.deb ...
 85s Unpacking dbus (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ...
 85s Preparing to unpack .../11-libdbus-1-3_1.16.2-2ubuntu3_amd64.deb ...
 85s Unpacking libdbus-1-3:amd64 (1.16.2-2ubuntu3) over (1.16.2-2ubuntu2) ...
 85s Preparing to unpack .../12-libdevmapper1.02.1_2%3a1.02.205-2ubuntu3_amd64.deb ...
 85s Unpacking libdevmapper1.02.1:amd64 (2:1.02.205-2ubuntu3) over (2:1.02.205-2ubuntu2) ...
 85s Preparing to unpack .../13-dmsetup_2%3a1.02.205-2ubuntu3_amd64.deb ...
 85s Unpacking dmsetup (2:1.02.205-2ubuntu3) over (2:1.02.205-2ubuntu2) ...
 85s Preparing to unpack .../14-ethtool_1%3a6.15-3build1_amd64.deb ...
 85s Unpacking ethtool (1:6.15-3build1) over (1:6.15-3) ...
 85s Preparing to unpack .../15-gir1.2-girepository-3.0_2.87.2-2_amd64.deb ...
 85s Unpacking gir1.2-girepository-3.0:amd64 (2.87.2-2) over (2.86.3-4) ...
 85s Preparing to unpack .../16-libgirepository-2.0-0_2.87.2-2_amd64.deb ...
 85s Unpacking libgirepository-2.0-0:amd64 (2.87.2-2) over (2.86.3-4) ...
 85s Preparing to unpack .../17-libatomic1_16-20260208-1ubuntu1_amd64.deb ...
 85s Unpacking libatomic1:amd64 (16-20260208-1ubuntu1) over (15.2.0-12ubuntu1) ...
 85s Preparing to unpack .../18-gir1.2-glib-2.0_2.87.2-2_amd64.deb ...
 85s Unpacking gir1.2-glib-2.0:amd64 (2.87.2-2) over (2.86.3-4) ...
 85s Preparing to unpack .../19-libglib2.0-0t64_2.87.2-2_amd64.deb ...
 85s Unpacking libglib2.0-0t64:amd64 (2.87.2-2) over (2.86.3-4) ...
 85s Preparing to unpack .../20-libbpf1_1%3a1.6.2-1build1_amd64.deb ...
 85s Unpacking libbpf1:amd64 (1:1.6.2-1build1) over (1:1.6.2-1) ...
 85s Preparing to unpack .../21-iptables_1.8.11-2ubuntu3_amd64.deb ...
 85s Unpacking iptables (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ...
 85s Preparing to unpack .../22-libip4tc2_1.8.11-2ubuntu3_amd64.deb ...
 85s Unpacking libip4tc2:amd64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ...
 86s Preparing to unpack .../23-libip6tc2_1.8.11-2ubuntu3_amd64.deb ...
 86s Unpacking libip6tc2:amd64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ...
 86s Preparing to unpack .../24-libnetfilter-conntrack3_1.1.1-1_amd64.deb ...
 86s Unpacking libnetfilter-conntrack3:amd64 (1.1.1-1) over (1.1.0-1build1) ...
 86s Preparing to unpack .../25-libxtables12_1.8.11-2ubuntu3_amd64.deb ...
 86s Unpacking libxtables12:amd64 (1.8.11-2ubuntu3) over (1.8.11-2ubuntu2) ...
 86s Preparing to unpack .../26-iproute2_6.18.0-1ubuntu1_amd64.deb ...
 86s Unpacking iproute2 (6.18.0-1ubuntu1) over (6.16.0-1ubuntu3) ...
 86s Preparing to unpack .../27-less_668-1build1_amd64.deb ...
 86s Unpacking less (668-1build1) over (668-1) ...
 86s Preparing to unpack .../28-libcryptsetup12_2%3a2.8.0-1ubuntu3_amd64.deb ...
 86s Unpacking libcryptsetup12:amd64 (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ...
 86s Preparing to unpack .../29-libglib2.0-data_2.87.2-2_all.deb ...
 86s Unpacking libglib2.0-data (2.87.2-2) over (2.86.3-4) ...
 86s Preparing to unpack .../30-libidn2-0_2.3.8-4build1_amd64.deb ...
 86s Unpacking libidn2-0:amd64 (2.3.8-4build1) over (2.3.8-4) ...
 86s Preparing to unpack .../31-libkeyutils1_1.6.3-6ubuntu3_amd64.deb ...
 86s Unpacking libkeyutils1:amd64 (1.6.3-6ubuntu3) over (1.6.3-6ubuntu2) ...
 86s Preparing to unpack .../32-python3-linkify-it_2.0.3-1ubuntu3_all.deb ...
 86s Unpacking python3-linkify-it (2.0.3-1ubuntu3) over (2.0.3-1ubuntu2) ...
 86s Preparing to unpack .../33-python3-markdown-it_3.0.0-3build1_all.deb ...
 86s Unpacking python3-markdown-it (3.0.0-3build1) over (3.0.0-3) ...
 86s Preparing to unpack .../34-shared-mime-info_2.4-5build3_amd64.deb ...
 86s Unpacking shared-mime-info (2.4-5build3) over (2.4-5build2) ...
 86s Preparing to unpack .../35-busybox-static_1%3a1.37.0-7ubuntu1_amd64.deb ...
 86s Unpacking busybox-static (1:1.37.0-7ubuntu1) over (1:1.37.0-4ubuntu1) ...
 86s Preparing to unpack .../36-libdrm-common_2.4.131-1_all.deb ...
 86s Unpacking libdrm-common (2.4.131-1) over (2.4.129-1) ...
 86s Preparing to unpack .../37-libdrm2_2.4.131-1_amd64.deb ...
 86s Unpacking libdrm2:amd64 (2.4.131-1) over (2.4.129-1) ...
 86s Preparing to unpack .../38-libgdbm6t64_1.26-1build1_amd64.deb ...
 86s Unpacking libgdbm6t64:amd64 (1.26-1build1) over (1.26-1) ...
 86s Preparing to unpack .../39-libgpm2_1.20.7-12build1_amd64.deb ...
 86s Unpacking libgpm2:amd64 (1.20.7-12build1) over (1.20.7-12) ...
 86s Preparing to unpack .../40-libjansson4_2.14-2build4_amd64.deb ...
 86s Unpacking libjansson4:amd64 (2.14-2build4) over (2.14-2build3) ...
 86s Preparing to unpack .../41-lsof_4.99.4+dfsg-2build2_amd64.deb ...
 86s Unpacking lsof (4.99.4+dfsg-2build2) over (4.99.4+dfsg-2build1) ...
 86s Preparing to unpack .../42-liblsof0_4.99.4+dfsg-2build2_amd64.deb ...
 86s Unpacking liblsof0 (4.99.4+dfsg-2build2) over (4.99.4+dfsg-2build1) ...
 86s Preparing to unpack .../43-libmaxminddb0_1.12.2-1build2_amd64.deb ...
 86s Unpacking libmaxminddb0:amd64 (1.12.2-1build2) over (1.12.2-1build1) ...
 87s Preparing to unpack .../44-libpcap0.8t64_1.10.5-2ubuntu3_amd64.deb ...
 87s Unpacking libpcap0.8t64:amd64 (1.10.5-2ubuntu3) over (1.10.5-2ubuntu2) ...
 87s Preparing to unpack .../45-pciutils_1%3a3.14.0-1build2_amd64.deb ...
 87s Unpacking pciutils (1:3.14.0-1build2) over (1:3.14.0-1build1) ...
 87s Preparing to unpack .../46-libpci3_1%3a3.14.0-1build2_amd64.deb ...
 87s Unpacking libpci3:amd64 (1:3.14.0-1build2) over (1:3.14.0-1build1) ...
 87s Preparing to unpack .../47-libsensors-config_1%3a3.6.2-2build1_all.deb ...
 87s Unpacking libsensors-config (1:3.6.2-2build1) over (1:3.6.2-2) ...
 87s Preparing to unpack .../48-libsensors5_1%3a3.6.2-2build1_amd64.deb ...
 87s Unpacking libsensors5:amd64 (1:3.6.2-2build1) over (1:3.6.2-2) ...
 87s Preparing to unpack .../49-libusb-1.0-0_2%3a1.0.29-2build1_amd64.deb ...
 87s Unpacking libusb-1.0-0:amd64 (2:1.0.29-2build1) over (2:1.0.29-2) ...
 87s Preparing to unpack .../50-libxau6_1%3a1.0.11-1build2_amd64.deb ...
 87s Unpacking libxau6:amd64 (1:1.0.11-1build2) over (1:1.0.11-1build1) ...
 87s Preparing to unpack .../51-libxkbcommon0_1.13.1-1_amd64.deb ...
 87s Unpacking libxkbcommon0:amd64 (1.13.1-1) over (1.12.3-1) ...
 87s Preparing to unpack .../52-man-db_2.13.1-1build1_amd64.deb ...
 87s Unpacking man-db (2.13.1-1build1) over (2.13.1-1) ...
 87s Preparing to unpack .../53-tcpdump_4.99.5-2ubuntu3_amd64.deb ...
 87s Unpacking tcpdump (4.99.5-2ubuntu3) over (4.99.5-2ubuntu2) ...
 87s Preparing to unpack .../54-wget_1.25.0-2ubuntu4_amd64.deb ...
 87s Unpacking wget (1.25.0-2ubuntu4) over (1.25.0-2ubuntu3) ...
 87s Preparing to unpack .../55-ubuntu-standard_1.564_amd64.deb ...
 87s Unpacking ubuntu-standard (1.564) over (1.563) ...
 87s Preparing to unpack .../56-3cpio_0.14.0-1ubuntu1_amd64.deb ...
 87s Unpacking 3cpio (0.14.0-1ubuntu1) over (0.13.1-1ubuntu1) ...
 87s Preparing to unpack .../57-bpftool_7.7.0+6.19.0-3.3_amd64.deb ...
 87s Unpacking bpftool (7.7.0+6.19.0-3.3) over (7.7.0+6.18.0-9.9) ...
 87s Preparing to unpack .../58-busybox-initramfs_1%3a1.37.0-7ubuntu1_amd64.deb ...
 87s Unpacking busybox-initramfs (1:1.37.0-7ubuntu1) over (1:1.37.0-4ubuntu1) ...
 87s Preparing to unpack .../59-cryptsetup-bin_2%3a2.8.0-1ubuntu3_amd64.deb ...
 87s Unpacking cryptsetup-bin (2:2.8.0-1ubuntu3) over (2:2.8.0-1ubuntu2) ...
 87s Preparing to unpack .../60-dracut-install_109-11ubuntu1_amd64.deb ...
 87s Unpacking dracut-install (109-11ubuntu1) over (109-9ubuntu1) ...
 87s Preparing to unpack .../61-hwdata_0.394-1build1_all.deb ...
 87s Unpacking hwdata (0.394-1build1) over (0.394-1) ...
 87s Preparing to unpack .../62-pnp.ids_0.394-1build1_all.deb ...
 87s Unpacking pnp.ids (0.394-1build1) over (0.394-1) ...
 87s Preparing to unpack .../63-libdrm-amdgpu1_2.4.131-1_amd64.deb ...
 87s Unpacking libdrm-amdgpu1:amd64 (2.4.131-1) over (2.4.129-1) ...
 87s Preparing to unpack .../64-libevent-core-2.1-7t64_2.1.12-stable-10build2_amd64.deb ...
 87s Unpacking libevent-core-2.1-7t64:amd64 (2.1.12-stable-10build2) over (2.1.12-stable-10build1) ...
 87s Preparing to unpack .../65-libgdbm-compat4t64_1.26-1build1_amd64.deb ...
 87s Unpacking libgdbm-compat4t64:amd64 (1.26-1build1) over (1.26-1) ...
 87s Preparing to unpack .../66-libgudev-1.0-0_1%3a238-7build1_amd64.deb ...
 87s Unpacking libgudev-1.0-0:amd64 (1:238-7build1) over (1:238-7) ...
 87s Preparing to unpack .../67-libnpth0t64_1.8-3build1_amd64.deb ...
 87s Unpacking libnpth0t64:amd64 (1.8-3build1) over (1.8-3) ...
 87s Preparing to unpack .../68-libonig5_6.9.10-1build1_amd64.deb ...
 87s Unpacking libonig5:amd64 (6.9.10-1build1) over (6.9.10-1) ...
 87s Selecting previously unselected package libpython3.14-minimal:amd64.
 87s Preparing to unpack .../69-libpython3.14-minimal_3.14.2-1_amd64.deb ...
 87s Unpacking libpython3.14-minimal:amd64 (3.14.2-1) ...
 87s Selecting previously unselected package libpython3.14-stdlib:amd64.
 87s Preparing to unpack .../70-libpython3.14-stdlib_3.14.2-1_amd64.deb ...
 88s Unpacking libpython3.14-stdlib:amd64 (3.14.2-1) ...
 88s Selecting previously unselected package libpython3.14:amd64.
 88s Preparing to unpack .../71-libpython3.14_3.14.2-1_amd64.deb ...
 88s Unpacking libpython3.14:amd64 (3.14.2-1) ...
 88s Preparing to unpack .../72-libwrap0_7.6.q-36build2_amd64.deb ...
 88s Unpacking libwrap0:amd64 (7.6.q-36build2) over (7.6.q-36build1) ...
 88s Selecting previously unselected package linux-modules-6.19.0-3-generic.
 88s Preparing to unpack .../73-linux-modules-6.19.0-3-generic_6.19.0-3.3_amd64.deb ...
 88s Unpacking linux-modules-6.19.0-3-generic (6.19.0-3.3) ...
 89s Selecting previously unselected package linux-image-6.19.0-3-generic.
 89s Preparing to unpack .../74-linux-image-6.19.0-3-generic_6.19.0-3.3+1_amd64.deb ...
 89s Unpacking linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
 89s Preparing to unpack .../75-amd64-microcode_3.20251202.1ubuntu1_amd64.deb ...
 89s Unpacking amd64-microcode (3.20251202.1ubuntu1) over (3.20250708.1ubuntu1) ...
 89s Preparing to unpack .../76-linux-generic_6.19.0-3.3_amd64.deb ...
 89s Unpacking linux-generic (6.19.0-3.3) over (6.18.0-9.9+1) ...
 89s Preparing to unpack .../77-linux-image-generic_6.19.0-3.3_amd64.deb ...
 89s Unpacking linux-image-generic (6.19.0-3.3) over (6.18.0-9.9+1) ...
 89s Preparing to unpack .../78-linux-virtual_6.19.0-3.3_amd64.deb ...
 89s Unpacking linux-virtual (6.19.0-3.3) over (6.18.0-9.9+1) ...
 89s Preparing to unpack .../79-linux-image-virtual_6.19.0-3.3_amd64.deb ...
 89s Unpacking linux-image-virtual (6.19.0-3.3) over (6.18.0-9.9+1) ...
 89s Preparing to unpack .../80-linux-headers-virtual_6.19.0-3.3_amd64.deb ...
 89s Unpacking linux-headers-virtual (6.19.0-3.3) over (6.18.0-9.9+1) ...
 89s Selecting previously unselected package linux-headers-6.19.0-3.
 89s Preparing to unpack .../81-linux-headers-6.19.0-3_6.19.0-3.3_all.deb ...
 89s Unpacking linux-headers-6.19.0-3 (6.19.0-3.3) ...
 90s Selecting previously unselected package linux-headers-6.19.0-3-generic.
 90s Preparing to unpack .../82-linux-headers-6.19.0-3-generic_6.19.0-3.3_amd64.deb ...
 90s Unpacking linux-headers-6.19.0-3-generic (6.19.0-3.3) ...
 91s Preparing to unpack .../83-linux-headers-generic_6.19.0-3.3_amd64.deb ...
 91s Unpacking linux-headers-generic (6.19.0-3.3) over (6.18.0-9.9+1) ...
 91s Preparing to unpack .../84-linux-perf_6.19.0-3.3_amd64.deb ...
 91s Unpacking linux-perf (6.19.0-3.3) over (6.18.0-9.9) ...
 91s Preparing to unpack .../85-linux-tools-common_6.19.0-3.3_all.deb ...
 91s Unpacking linux-tools-common (6.19.0-3.3) over (6.18.0-9.9) ...
 91s Selecting previously unselected package linux-tools-6.19.0-3.
 91s Preparing to unpack .../86-linux-tools-6.19.0-3_6.19.0-3.3_amd64.deb ...
 91s Unpacking linux-tools-6.19.0-3 (6.19.0-3.3) ...
 91s Selecting previously unselected package linux-tools-6.19.0-3-generic.
 91s Preparing to unpack .../87-linux-tools-6.19.0-3-generic_6.19.0-3.3_amd64.deb ...
 91s Unpacking linux-tools-6.19.0-3-generic (6.19.0-3.3) ...
 91s Preparing to unpack .../88-patch_2.8-2build1_amd64.deb ...
 91s Unpacking patch (2.8-2build1) over (2.8-2) ...
 91s Preparing to unpack .../89-pollinate_4.33-4ubuntu5_all.deb ...
 91s Unpacking pollinate (4.33-4ubuntu5) over (4.33-4ubuntu4) ...
 91s Preparing to unpack .../90-python3-referencing_0.36.2-1ubuntu2_all.deb ...
 91s Unpacking python3-referencing (0.36.2-1ubuntu2) over (0.36.2-1ubuntu1) ...
 91s Preparing to unpack .../91-ubuntu-kernel-accessories_1.564_amd64.deb ...
 91s Unpacking ubuntu-kernel-accessories (1.564) over (1.563) ...
 91s Setting up libip4tc2:amd64 (1.8.11-2ubuntu3) ...
 91s Setting up 3cpio (0.14.0-1ubuntu1) ...
 91s Setting up libxau6:amd64 (1:1.0.11-1build2) ...
 91s Setting up libnpth0t64:amd64 (1.8-3build1) ...
 91s Setting up libkeyutils1:amd64 (1.6.3-6ubuntu3) ...
 91s Setting up ubuntu-kernel-accessories (1.564) ...
 91s Setting up libgpm2:amd64 (1.20.7-12build1) ...
 91s Setting up libgdbm6t64:amd64 (1.26-1build1) ...
 91s Setting up linux-modules-6.19.0-3-generic (6.19.0-3.3) ...
 93s Setting up libgdbm-compat4t64:amd64 (1.26-1build1) ...
 93s Setting up bpftool (7.7.0+6.19.0-3.3) ...
 93s Setting up libip6tc2:amd64 (1.8.11-2ubuntu3) ...
 93s Setting up liblsof0 (4.99.4+dfsg-2build2) ...
 93s Setting up libmaxminddb0:amd64 (1.12.2-1build2) ...
 93s Setting up libpython3.14-minimal:amd64 (3.14.2-1) ...
 93s Setting up libsensors-config (1:3.6.2-2build1) ...
 93s Setting up less (668-1build1) ...
 93s Setting up linux-headers-6.19.0-3 (6.19.0-3.3) ...
 93s Setting up libidn2-0:amd64 (2.3.8-4build1) ...
 93s Setting up amd64-microcode (3.20251202.1ubuntu1) ...
 93s amd64-microcode: microcode will be updated at next boot
 93s Setting up man-db (2.13.1-1build1) ...
 93s Updating database of manual pages ...
 94s man-db.service is a disabled or a static unit not running, not starting it.
 94s Setting up libjansson4:amd64 (2.14-2build4) ...
 94s Setting up libglib2.0-data (2.87.2-2) ...
 94s Setting up pollinate (4.33-4ubuntu5) ...
105s Setting up busybox-static (1:1.37.0-7ubuntu1) ...
105s Setting up libwrap0:amd64 (7.6.q-36build2) ...
105s Setting up linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
106s I: /boot/vmlinuz is now a symlink to vmlinuz-6.19.0-3-generic
106s I: /boot/initrd.img is now a symlink to initrd.img-6.19.0-3-generic
106s Setting up libdbus-1-3:amd64 (1.16.2-2ubuntu3) ...
106s Setting up libatomic1:amd64 (16-20260208-1ubuntu1) ...
106s Setting up patch (2.8-2build1) ...
106s Setting up libsensors5:amd64 (1:3.6.2-2build1) ...
106s Setting up busybox-initramfs (1:1.37.0-7ubuntu1) ...
106s Setting up libxtables12:amd64 (1.8.11-2ubuntu3) ...
106s Setting up lsof (4.99.4+dfsg-2build2) ...
106s Setting up libpci3:amd64 (1:3.14.0-1build2) ...
106s Setting up libdevmapper1.02.1:amd64 (2:1.02.205-2ubuntu3) ...
106s Setting up dracut-install (109-11ubuntu1) ...
106s Setting up dmsetup (2:1.02.205-2ubuntu3) ...
106s Setting up libnetfilter-conntrack3:amd64 (1.1.1-1) ...
106s Setting up pnp.ids (0.394-1build1) ...
106s Setting up dbus-session-bus-common (1.16.2-2ubuntu3) ...
106s Setting up python3-linkify-it (2.0.3-1ubuntu3) ...
106s Setting up libpcap0.8t64:amd64 (1.10.5-2ubuntu3) ...
106s Setting up libcryptsetup12:amd64 (2:2.8.0-1ubuntu3) ...
106s Setting up mawk (1.3.4.20260129-1) ...
106s Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10build2) ...
106s Setting up libusb-1.0-0:amd64 (2:1.0.29-2build1) ...
106s Setting up linux-image-virtual (6.19.0-3.3) ...
106s Setting up dbus-system-bus-common (1.16.2-2ubuntu3) ...
106s Setting up libbsd0:amd64 (0.12.2-2build2) ...
106s Setting up libdrm-common (2.4.131-1) ...
106s Setting up libstdc++6:amd64 (16-20260208-1ubuntu1) ...
106s Setting up dbus-bin (1.16.2-2ubuntu3) ...
106s Setting up libonig5:amd64 (6.9.10-1build1) ...
106s Setting up libbpf1:amd64 (1:1.6.2-1build1) ...
106s Setting up ethtool (1:6.15-3build1) ...
106s Setting up python3-referencing (0.36.2-1ubuntu2) ...
106s Setting up libxkbcommon0:amd64 (1.13.1-1) ...
106s Setting up cryptsetup-bin (2:2.8.0-1ubuntu3) ...
106s Setting up linux-headers-6.19.0-3-generic (6.19.0-3.3) ...
106s Setting up tcpdump (4.99.5-2ubuntu3) ...
107s Setting up linux-image-generic (6.19.0-3.3) ...
107s Setting up wget (1.25.0-2ubuntu4) ...
107s Setting up libpython3.14-stdlib:amd64 (3.14.2-1) ...
107s Setting up iptables (1.8.11-2ubuntu3) ...
107s Setting up iproute2 (6.18.0-1ubuntu1) ...
107s Setting up linux-headers-generic (6.19.0-3.3) ...
107s Setting up dbus-daemon (1.16.2-2ubuntu3) ...
107s Setting up hwdata (0.394-1build1) ...
107s Setting up dbus-user-session (1.16.2-2ubuntu3) ...
107s Setting up libglib2.0-0t64:amd64 (2.87.2-2) ...
107s No schema files found: doing nothing.
107s Setting up dbus (1.16.2-2ubuntu3) ...
107s A reboot is required to replace the running dbus-daemon.
107s Please reboot the system when convenient.
107s Setting up shared-mime-info (2.4-5build3) ...
108s Setting up gir1.2-glib-2.0:amd64 (2.87.2-2) ...
108s Setting up pciutils (1:3.14.0-1build2) ...
108s Setting up python3-markdown-it (3.0.0-3build1) ...
108s Setting up libdrm2:amd64 (2.4.131-1) ...
108s Setting up libpython3.14:amd64 (3.14.2-1) ...
108s Setting up libapt-pkg7.0:amd64 (3.1.15) ...
108s Setting up linux-tools-common (6.19.0-3.3) ...
108s Setting up libgudev-1.0-0:amd64 (1:238-7build1) ...
108s Setting up libdrm-amdgpu1:amd64 (2.4.131-1) ...
108s Setting up apt (3.1.15) ...
108s Setting up linux-headers-virtual (6.19.0-3.3) ...
108s Setting up linux-generic (6.19.0-3.3) ...
108s Setting up libgirepository-2.0-0:amd64 (2.87.2-2) ...
108s Setting up linux-tools-6.19.0-3 (6.19.0-3.3) ...
108s Setting up ubuntu-standard (1.564) ...
108s Setting up gir1.2-girepository-3.0:amd64 (2.87.2-2) ...
108s Setting up linux-virtual (6.19.0-3.3) ...
108s Setting up linux-perf (6.19.0-3.3) ...
108s Setting up linux-tools-6.19.0-3-generic (6.19.0-3.3) ...
108s Processing triggers for debianutils (5.23.2build1) ...
108s Processing triggers for install-info (7.2-5) ...
108s Processing triggers for initramfs-tools (0.150ubuntu7) ...
108s update-initramfs: Generating /boot/initrd.img-6.18.0-9-generic
114s Processing triggers for libc-bin (2.42-2ubuntu4) ...
114s Processing triggers for linux-image-6.19.0-3-generic (6.19.0-3.3+1) ...
114s /etc/kernel/postinst.d/initramfs-tools:
114s update-initramfs: Generating /boot/initrd.img-6.19.0-3-generic
118s /etc/kernel/postinst.d/zz-update-grub:
118s Sourcing file `/etc/default/grub'
118s Sourcing file `/etc/default/grub.d/50-cloudimg-settings.cfg'
118s Sourcing file `/etc/default/grub.d/90-autopkgtest.cfg'
118s Generating grub configuration file ...
118s Found linux image: /boot/vmlinuz-6.19.0-3-generic
118s Found initrd image: /boot/initrd.img-6.19.0-3-generic
118s Found linux image: /boot/vmlinuz-6.18.0-9-generic
118s Found initrd image: /boot/initrd.img-6.18.0-9-generic
118s Warning: os-prober will not be executed to detect other bootable partitions.
118s Systems on them will not be added to the GRUB boot configuration.
118s Check GRUB_DISABLE_OS_PROBER documentation entry.
118s Adding boot menu entry for UEFI Firmware Settings ...
118s done
119s autopkgtest [04:08:52]: upgrading testbed (apt dist-upgrade and autopurge)
119s Reading package lists...
119s Building dependency tree...
119s Reading state information...
120s Calculating upgrade...
120s The following package was automatically installed and is no longer required:
120s   libpython3.13
120s Use 'sudo apt autoremove' to remove it.
120s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
120s Reading package lists...
120s Building dependency tree...
120s Reading state information...
120s Solving dependencies...
120s The following packages will be REMOVED:
120s   libpython3.13*
121s 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded.
121s After this operation, 7599 kB disk space will be freed.
121s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 125273 files and directories currently installed.)
121s Removing libpython3.13:amd64 (3.13.11-1) ...
121s Processing triggers for libc-bin (2.42-2ubuntu4) ...
121s autopkgtest [04:08:54]: rebooting testbed after setup commands that affected boot
149s autopkgtest [04:09:22]: testbed running kernel: Linux 6.19.0-3-generic #3-Ubuntu SMP PREEMPT_DYNAMIC Fri Jan 23 20:01:24 UTC 2026
151s autopkgtest [04:09:24]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-degnorm
152s Get:1 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-degnorm 1.16.0+ds-2 (dsc) [2420 B]
152s Get:2 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-degnorm 1.16.0+ds-2 (tar) [1682 kB]
152s Get:3 http://ftpmaster.internal/ubuntu resolute/universe r-bioc-degnorm 1.16.0+ds-2 (diff) [3192 B]
153s gpgv: Signature made Tue Jan 14 07:37:59 2025 UTC
153s gpgv:                using RSA key 724D609337113C710550D7473C26763F6C67E6E2
153s gpgv:                issuer "crusoe@debian.org"
153s gpgv: Can't check signature: No public key
153s dpkg-source: warning: cannot verify inline signature for ./r-bioc-degnorm_1.16.0+ds-2.dsc: no acceptable signature found
153s autopkgtest [04:09:26]: testing package r-bioc-degnorm version 1.16.0+ds-2
153s autopkgtest [04:09:26]: build not needed
159s autopkgtest [04:09:32]: test pkg-r-autopkgtest: preparing testbed
159s Reading package lists...
160s Building dependency tree...
160s Reading state information...
160s Solving dependencies...
160s The following NEW packages will be installed:
160s   build-essential cpp cpp-15 cpp-15-x86-64-linux-gnu cpp-x86-64-linux-gnu
160s   dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
160s   fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-15
160s   g++-15-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-15
160s   gcc-15-x86-64-linux-gnu gcc-x86-64-linux-gnu gfortran gfortran-15
160s   gfortran-15-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools
160s   javascript-common libasan8 libblas-dev libblas3 libboost-dev
160s   libboost1.90-dev libbz2-dev libc-dev-bin libc6-dev libcairo2 libcc1-0
160s   libcrypt-dev libdatrie1 libdeflate-dev libdeflate0 libfontconfig1
160s   libgcc-15-dev libgfortran-15-dev libgfortran5 libgomp1 libgraphite2-3
160s   libharfbuzz0b libhwasan0 libice6 libicu-dev libisl23 libitm1 libjbig0
160s   libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev
160s   libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js
160s   libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js
160s   libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js
160s   libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js
160s   libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 liblerc4
160s   liblsan0 liblua5.4-0 liblzma-dev libmpc3 libncurses-dev libpango-1.0-0
160s   libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libpcre2-16-0
160s   libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3
160s   libpng-dev libquadmath0 libreadline-dev libsharpyuv0 libsm6 libstdc++-15-dev
160s   libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2
160s   libubsan1 libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1
160s   libxt6t64 libzstd-dev linux-libc-dev node-bootstrap-sass node-html5shiv
160s   node-normalize.css pandoc pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin
160s   r-base-core r-base-dev r-bioc-annotationdbi r-bioc-biobase
160s   r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel
160s   r-bioc-biomart r-bioc-biostrings r-bioc-degnorm r-bioc-delayedarray
160s   r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments
160s   r-bioc-genomicfeatures r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest
160s   r-bioc-matrixgenerics r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer
160s   r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray
160s   r-bioc-summarizedexperiment r-bioc-txdbmaker r-bioc-ucsc.utils
160s   r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-assertthat
160s   r-cran-base64enc r-cran-bh r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob
160s   r-cran-bslib r-cran-ca r-cran-cachem r-cran-callr r-cran-cli r-cran-cluster
160s   r-cran-codetools r-cran-colorspace r-cran-colourpicker r-cran-commonmark
160s   r-cran-cpp11 r-cran-crayon r-cran-crosstalk r-cran-curl r-cran-data.table
160s   r-cran-dbi r-cran-dbplyr r-cran-dendextend r-cran-digest r-cran-doparallel
160s   r-cran-dplyr r-cran-egg r-cran-evaluate r-cran-fansi r-cran-farver
160s   r-cran-fastmap r-cran-filelock r-cran-fontawesome r-cran-foreach
160s   r-cran-formatr r-cran-fs r-cran-futile.logger r-cran-futile.options
160s   r-cran-gclus r-cran-generics r-cran-ggplot2 r-cran-glue r-cran-gridextra
160s   r-cran-gtable r-cran-heatmaply r-cran-highr r-cran-hms r-cran-htmltools
160s   r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-httr2 r-cran-isoband
160s   r-cran-iterators r-cran-jquerylib r-cran-jsonlite r-cran-knitr
160s   r-cran-labeling r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lazyeval
160s   r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix
160s   r-cran-matrixstats r-cran-memoise r-cran-mgcv r-cran-mime r-cran-miniui
160s   r-cran-nlme r-cran-openssl r-cran-permute r-cran-pillar r-cran-pkgconfig
160s   r-cran-pkgkitten r-cran-plogr r-cran-plotly r-cran-plyr r-cran-png
160s   r-cran-prettyunits r-cran-processx r-cran-progress r-cran-promises r-cran-ps
160s   r-cran-purrr r-cran-qap r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer
160s   r-cran-rcpp r-cran-rcpparmadillo r-cran-rcurl r-cran-registry
160s   r-cran-reshape2 r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown
160s   r-cran-rsqlite r-cran-s7 r-cran-sass r-cran-scales r-cran-seriation
160s   r-cran-shiny r-cran-shinyjs r-cran-snow r-cran-sourcetools r-cran-stringi
160s   r-cran-stringr r-cran-sys r-cran-tibble r-cran-tidyr r-cran-tidyselect
160s   r-cran-tinytex r-cran-tsp r-cran-utf8 r-cran-vctrs r-cran-vegan
160s   r-cran-viridis r-cran-viridislite r-cran-webshot r-cran-withr r-cran-xfun
160s   r-cran-xml r-cran-xml2 r-cran-xtable r-cran-yaml rpcsvc-proto unzip
160s   x11-common xdg-utils zip zlib1g-dev
160s 0 upgraded, 297 newly installed, 0 to remove and 0 not upgraded.
160s Need to get 364 MB of archives.
160s After this operation, 1209 MB of additional disk space will be used.
160s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 libc-dev-bin amd64 2.42-2ubuntu4 [23.3 kB]
160s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-libc-dev amd64 6.19.0-3.3 [1846 kB]
161s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libcrypt-dev amd64 1:4.5.1-1 [122 kB]
161s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 rpcsvc-proto amd64 1.4.3-1build1 [68.3 kB]
161s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 libc6-dev amd64 2.42-2ubuntu4 [2207 kB]
161s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libisl23 amd64 0.27-1build1 [691 kB]
161s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 libmpc3 amd64 1.3.1-2 [54.8 kB]
161s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [12.9 MB]
162s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15 amd64 15.2.0-12ubuntu1 [1034 B]
162s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [5746 B]
162s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp amd64 4:15.2.0-4ubuntu1 [22.4 kB]
162s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libcc1-0 amd64 16-20260208-1ubuntu1 [51.2 kB]
162s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 16-20260208-1ubuntu1 [162 kB]
162s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 libitm1 amd64 16-20260208-1ubuntu1 [30.2 kB]
162s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libasan8 amd64 16-20260208-1ubuntu1 [3182 kB]
162s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsan0 amd64 16-20260208-1ubuntu1 [1392 kB]
162s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 libtsan2 amd64 16-20260208-1ubuntu1 [2838 kB]
162s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 libubsan1 amd64 16-20260208-1ubuntu1 [1238 kB]
162s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 libhwasan0 amd64 16-20260208-1ubuntu1 [1729 kB]
162s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libquadmath0 amd64 16-20260208-1ubuntu1 [155 kB]
162s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-15-dev amd64 15.2.0-12ubuntu1 [2866 kB]
162s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [25.4 MB]
163s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15 amd64 15.2.0-12ubuntu1 [530 kB]
163s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1208 B]
163s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc amd64 4:15.2.0-4ubuntu1 [5024 B]
163s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++-15-dev amd64 15.2.0-12ubuntu1 [2553 kB]
163s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [14.4 MB]
163s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15 amd64 15.2.0-12ubuntu1 [25.3 kB]
163s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [966 B]
163s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 g++ amd64 4:15.2.0-4ubuntu1 [1100 B]
163s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 build-essential amd64 12.12ubuntu2 [5256 B]
163s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 dctrl-tools amd64 2.24-3build4 [104 kB]
163s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-mono all 2.37-8build1 [502 kB]
163s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-core all 2.37-8build1 [834 kB]
163s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig-config amd64 2.17.1-3ubuntu1 [38.5 kB]
163s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 libfontconfig1 amd64 2.17.1-3ubuntu1 [144 kB]
163s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig amd64 2.17.1-3ubuntu1 [180 kB]
163s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1build1 [531 kB]
163s Get:39 http://ftpmaster.internal/ubuntu resolute/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB]
163s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB]
163s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 16-20260208-1ubuntu1 [957 kB]
164s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran-15-dev amd64 15.2.0-12ubuntu1 [973 kB]
164s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [13.6 MB]
164s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15 amd64 15.2.0-12ubuntu1 [18.1 kB]
164s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1014 B]
164s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran amd64 4:15.2.0-4ubuntu1 [1172 B]
164s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 icu-devtools amd64 78.2-1ubuntu1 [214 kB]
164s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 javascript-common all 12+nmu1build1 [4864 B]
164s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7ubuntu1 [260 kB]
164s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas-dev amd64 3.12.1-7ubuntu1 [235 kB]
164s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost1.90-dev amd64 1.90.0-2ubuntu1 [11.5 MB]
164s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-dev amd64 1.90.0.0ubuntu3 [4764 B]
164s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libbz2-dev amd64 1.0.8-6build2 [36.2 kB]
164s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 libpixman-1-0 amd64 0.46.4-1 [287 kB]
164s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-render0 amd64 1.17.0-2ubuntu1 [16.2 kB]
164s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-shm0 amd64 1.17.0-2ubuntu1 [5808 B]
164s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libxrender1 amd64 1:0.9.12-1 [19.8 kB]
164s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libcairo2 amd64 1.18.4-3 [579 kB]
164s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libdatrie1 amd64 0.2.14-1 [19.8 kB]
164s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate0 amd64 1.23-2build1 [51.6 kB]
164s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate-dev amd64 1.23-2build1 [58.8 kB]
164s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 libgraphite2-3 amd64 1.3.14-11ubuntu1 [73.7 kB]
164s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 libharfbuzz0b amd64 12.3.2-1 [519 kB]
164s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 x11-common all 1:7.7+24ubuntu1 [22.4 kB]
164s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 libice6 amd64 2:1.1.1-1build1 [44.0 kB]
164s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 libicu-dev amd64 78.2-1ubuntu1 [12.5 MB]
164s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8 amd64 2.1.5-4ubuntu3 [156 kB]
164s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8-dev amd64 2.1.5-4ubuntu3 [300 kB]
164s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8 amd64 8c-2ubuntu12 [2142 B]
164s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8-dev amd64 8c-2ubuntu12 [1480 B]
164s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-dev amd64 8c-2ubuntu12 [1480 B]
164s Get:72 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB]
164s Get:73 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-popper.js all 1.16.1+ds-6build1 [53.8 kB]
164s Get:74 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB]
164s Get:75 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-d3 all 3.5.17-4build1 [136 kB]
164s Get:76 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB]
164s Get:77 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-highlight.js all 10.7.3+dfsg-2 [144 kB]
164s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB]
164s Get:79 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2build1 [145 kB]
164s Get:80 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
164s Get:81 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-2 [3946 B]
164s Get:82 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
164s Get:83 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB]
164s Get:84 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-json all 0~20221030+~1.0.8-1build1 [20.6 kB]
164s Get:85 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-prettify all 2015.12.04+dfsg-3 [41.4 kB]
164s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7ubuntu1 [2739 kB]
164s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack-dev amd64 3.12.1-7ubuntu1 [5433 kB]
165s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu2 [207 kB]
165s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 liblua5.4-0 amd64 5.4.8-1 [174 kB]
165s Get:90 http://ftpmaster.internal/ubuntu resolute/main amd64 libncurses-dev amd64 6.6+20251231-1 [389 kB]
165s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai-data all 0.1.30-1 [155 kB]
165s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai0 amd64 0.1.30-1 [19.2 kB]
165s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 libpango-1.0-0 amd64 1.57.0-1 [241 kB]
165s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangoft2-1.0-0 amd64 1.57.0-1 [53.3 kB]
165s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangocairo-1.0-0 amd64 1.57.0-1 [29.0 kB]
165s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper2 amd64 2.2.5-0.3build1 [17.3 kB]
165s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper-utils amd64 2.2.5-0.3build1 [15.6 kB]
165s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-16-0 amd64 10.46-1 [243 kB]
165s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-32-0 amd64 10.46-1 [230 kB]
165s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-posix3 amd64 10.46-1 [7354 B]
165s Get:101 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-dev amd64 10.46-1 [832 kB]
165s Get:102 http://ftpmaster.internal/ubuntu resolute/main amd64 libpkgconf3 amd64 1.8.1-4build1 [32.8 kB]
165s Get:103 http://ftpmaster.internal/ubuntu resolute/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu2 [898 kB]
165s Get:104 http://ftpmaster.internal/ubuntu resolute/main amd64 libpng-dev amd64 1.6.54-1 [273 kB]
165s Get:105 http://ftpmaster.internal/ubuntu resolute/main amd64 libreadline-dev amd64 8.3-3 [189 kB]
165s Get:106 http://ftpmaster.internal/ubuntu resolute/main amd64 libsharpyuv0 amd64 1.5.0-0.1build1 [17.6 kB]
165s Get:107 http://ftpmaster.internal/ubuntu resolute/main amd64 libsm6 amd64 2:1.2.6-1build1 [16.9 kB]
165s Get:108 http://ftpmaster.internal/ubuntu resolute/main amd64 libtcl8.6 amd64 8.6.17+dfsg-1build1 [1003 kB]
165s Get:109 http://ftpmaster.internal/ubuntu resolute/main amd64 libjbig0 amd64 2.1-6.1ubuntu3 [30.0 kB]
165s Get:110 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebp7 amd64 1.5.0-0.1build1 [264 kB]
165s Get:111 http://ftpmaster.internal/ubuntu resolute/main amd64 libtiff6 amd64 4.7.0-3ubuntu3 [209 kB]
165s Get:112 http://ftpmaster.internal/ubuntu resolute/main amd64 libxft2 amd64 2.3.6-1build2 [45.1 kB]
165s Get:113 http://ftpmaster.internal/ubuntu resolute/main amd64 libxss1 amd64 1:1.2.3-1build4 [7084 B]
165s Get:114 http://ftpmaster.internal/ubuntu resolute/main amd64 libtk8.6 amd64 8.6.17-1 [823 kB]
165s Get:115 http://ftpmaster.internal/ubuntu resolute/main amd64 libxt6t64 amd64 1:1.2.1-1.3 [173 kB]
165s Get:116 http://ftpmaster.internal/ubuntu resolute/main amd64 libzstd-dev amd64 1.5.7+dfsg-3 [376 kB]
165s Get:117 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB]
165s Get:118 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
165s Get:119 http://ftpmaster.internal/ubuntu resolute/universe amd64 node-normalize.css all 8.0.1-5.1 [10.4 kB]
165s Get:120 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB]
165s Get:121 http://ftpmaster.internal/ubuntu resolute/universe amd64 pandoc amd64 3.1.11.1+ds-4 [27.2 MB]
165s Get:122 http://ftpmaster.internal/ubuntu resolute/main amd64 zip amd64 3.0-15ubuntu3 [175 kB]
165s Get:123 http://ftpmaster.internal/ubuntu resolute/main amd64 unzip amd64 6.0-29ubuntu1 [180 kB]
165s Get:124 http://ftpmaster.internal/ubuntu resolute/main amd64 xdg-utils all 1.2.1-2ubuntu2 [66.1 kB]
165s Get:125 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-core amd64 4.5.2-1ubuntu2 [28.8 MB]
166s Get:126 http://ftpmaster.internal/ubuntu resolute/main amd64 liblzma-dev amd64 5.8.2-2 [179 kB]
166s Get:127 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf-bin amd64 1.8.1-4build1 [21.7 kB]
166s Get:128 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf amd64 1.8.1-4build1 [16.8 kB]
166s Get:129 http://ftpmaster.internal/ubuntu resolute/main amd64 libtirpc-dev amd64 1.3.6+ds-1 [195 kB]
166s Get:130 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-dev all 4.5.2-1ubuntu2 [1880 B]
166s Get:131 http://ftpmaster.internal/ubuntu resolute/universe amd64 pkg-r-autopkgtest all 20250812 [6158 B]
166s Get:132 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocgenerics all 0.52.0-2 [624 kB]
166s Get:133 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biobase amd64 2.66.0-2 [2332 kB]
166s Get:134 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-s4vectors amd64 0.44.0+dfsg-2 [2065 kB]
166s Get:135 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-iranges amd64 2.40.1-3 [2309 kB]
166s Get:136 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dbi all 1.2.3-1build1 [855 kB]
166s Get:137 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bit amd64 4.6.0+dfsg-1 [466 kB]
166s Get:138 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bit64 amd64 4.6.0-1-4 [491 kB]
166s Get:139 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rlang amd64 1.1.5-3 [1721 kB]
166s Get:140 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB]
166s Get:141 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB]
166s Get:142 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lifecycle all 1.0.5+dfsg-1 [120 kB]
166s Get:143 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB]
166s Get:144 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-blob all 1.3.0-1 [54.1 kB]
166s Get:145 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB]
166s Get:146 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB]
166s Get:147 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-memoise all 2.0.1-1build1 [54.5 kB]
166s Get:148 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgconfig all 2.0.3-2build2 [20.4 kB]
166s Get:149 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plogr all 0.2.0-3build2 [15.8 kB]
166s Get:150 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cpp11 all 0.5.3-1 [242 kB]
167s Get:151 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rsqlite amd64 2.3.9-1 [1467 kB]
167s Get:152 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-curl amd64 7.0.0+dfsg-1 [202 kB]
167s Get:153 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB]
167s Get:154 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB]
167s Get:155 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sys amd64 3.4.3-1 [45.3 kB]
167s Get:156 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-askpass amd64 1.2.1-1 [24.9 kB]
167s Get:157 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-openssl amd64 2.3.2+dfsg-1 [407 kB]
167s Get:158 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB]
167s Get:159 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB]
167s Get:160 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-png amd64 0.1-8-1build2 [40.6 kB]
167s Get:161 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB]
167s Get:162 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-xvector amd64 0.46.0-2 [620 kB]
167s Get:163 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB]
167s Get:164 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB]
167s Get:165 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB]
167s Get:166 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB]
167s Get:167 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biostrings amd64 2.74.1+dfsg-2 [13.3 MB]
167s Get:168 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-keggrest all 1.46.0+dfsg-3 [183 kB]
167s Get:169 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-annotationdbi all 1.68.0-2 [4857 kB]
167s Get:170 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-generics all 0.1.4-1 [84.0 kB]
167s Get:171 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB]
167s Get:172 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB]
167s Get:173 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pillar all 1.11.1+dfsg-1 [456 kB]
167s Get:174 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fansi amd64 1.0.6-2 [626 kB]
167s Get:175 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB]
167s Get:176 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
167s Get:177 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB]
167s Get:178 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB]
167s Get:179 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-purrr amd64 1.0.4-1 [552 kB]
167s Get:180 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringi amd64 1.8.4-1build2 [908 kB]
167s Get:181 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB]
167s Get:182 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB]
167s Get:183 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dbplyr all 2.5.1+dfsg-1 [1237 kB]
167s Get:184 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-filelock amd64 1.0.3-1 [29.6 kB]
167s Get:185 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocfilecache all 2.14.0+dfsg-2 [300 kB]
167s Get:186 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB]
167s Get:187 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-formatr all 1.14-2 [152 kB]
167s Get:188 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lambda.r all 1.2.4-2build2 [118 kB]
167s Get:189 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-futile.options all 1.0.1-3build2 [20.5 kB]
167s Get:190 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-futile.logger all 1.4.3-4build2 [98.4 kB]
167s Get:191 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-snow all 1:0.4.4-2build1 [98.7 kB]
167s Get:192 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-codetools all 0.2-20-1build1 [91.1 kB]
167s Get:193 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bh all 1.84.0-1 [5962 B]
167s Get:194 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biocparallel amd64 1.40.0-2 [1337 kB]
167s Get:195 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-hms all 1.1.4-1 [102 kB]
167s Get:196 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-prettyunits all 1.2.0-1 [162 kB]
167s Get:197 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-progress all 1.2.3-1 [91.9 kB]
167s Get:198 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rappdirs amd64 0.3.3-1build1 [49.3 kB]
168s Get:199 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httr2 all 1.1.1-2 [752 kB]
168s Get:200 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-digest amd64 0.6.39-1 [203 kB]
168s Get:201 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xml2 amd64 1.4.1-1 [329 kB]
168s Get:202 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-biomart all 2.62.1+dfsg-1 [444 kB]
168s Get:203 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-littler amd64 0.3.22-1 [85.5 kB]
168s Get:204 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
168s Get:205 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpp amd64 1.1.0-1 [2021 kB]
168s Get:206 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomicranges amd64 1.58.0+dfsg-2 [2083 kB]
168s Get:207 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xml amd64 3.99-0.20-1 [1751 kB]
168s Get:208 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bitops amd64 1.0-9-1 [30.3 kB]
168s Get:209 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rhtslib amd64 3.2.0+dfsg-2 [1499 kB]
168s Get:210 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rsamtools amd64 2.22.0+dfsg-2 [3745 kB]
168s Get:211 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrixstats amd64 1.5.0-1 [542 kB]
168s Get:212 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB]
168s Get:213 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lattice amd64 0.22-7-1 [1367 kB]
168s Get:214 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrix amd64 1.7-4-1 [4220 kB]
168s Get:215 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-abind all 1.4-8-1build1 [67.0 kB]
168s Get:216 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-s4arrays amd64 1.6.0+dfsg-2 [698 kB]
168s Get:217 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-sparsearray amd64 1.6.2+dfsg-2 [1391 kB]
168s Get:218 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-delayedarray amd64 0.32.0+dfsg-2 [2064 kB]
168s Get:219 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB]
168s Get:220 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomicalignments amd64 1.42.0-2 [2165 kB]
168s Get:221 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [807 kB]
168s Get:222 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rjson amd64 0.2.23-1 [104 kB]
168s Get:223 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB]
168s Get:224 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-restfulr amd64 0.0.15-1 [380 kB]
168s Get:225 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-rtracklayer amd64 1.66.0-3 [5225 kB]
169s Get:226 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-genomicfeatures all 1.58.0+dfsg-2 [937 kB]
169s Get:227 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-txdbmaker all 1.2.1+ds-2 [875 kB]
169s Get:228 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-iterators all 1.0.14-1build1 [336 kB]
169s Get:229 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-foreach all 1.5.2-1build1 [124 kB]
169s Get:230 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-doparallel all 1.0.17-1build1 [189 kB]
169s Get:231 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB]
169s Get:232 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB]
169s Get:233 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-s7 amd64 0.2.0-1 [328 kB]
169s Get:234 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB]
169s Get:235 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB]
169s Get:236 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build2 [54.0 kB]
169s Get:237 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridislite all 0.4.3-1 [1088 kB]
169s Get:238 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-scales all 1.4.0-1 [725 kB]
169s Get:239 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 r-cran-ggplot2 all 4.0.2+dfsg-1 [4941 kB]
169s Get:240 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-base64enc amd64 0.1-3-3build1 [28.5 kB]
169s Get:241 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB]
169s Get:242 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-evaluate all 1.0.5-1 [117 kB]
169s Get:243 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xfun amd64 0.55+dfsg-1 [587 kB]
169s Get:244 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB]
169s Get:245 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB]
169s Get:246 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-knitr all 1.51+dfsg-1 [847 kB]
169s Get:247 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-5 [13.7 kB]
169s Get:248 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB]
169s Get:249 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB]
169s Get:250 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-bslib all 0.9.0+dfsg-3build1 [4560 kB]
169s Get:251 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB]
169s Get:252 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tinytex all 0.58-1 [148 kB]
169s Get:253 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-modernizr all 3.13.0-0.1build1 [100 kB]
169s Get:254 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB]
169s Get:255 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB]
169s Get:256 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB]
169s Get:257 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-xtable all 1:1.8-4-2build1 [691 kB]
169s Get:258 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB]
169s Get:259 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-commonmark amd64 1.9.5-1 [138 kB]
169s Get:260 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
169s Get:261 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB]
170s Get:262 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rmarkdown all 2.30+dfsg-1 [1501 kB]
170s Get:263 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB]
170s Get:264 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lazyeval amd64 0.2.2-1build2 [146 kB]
170s Get:265 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-crosstalk all 1.2.2+dfsg-1 [181 kB]
170s Get:266 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-data.table amd64 1.17.0+dfsg-1 [2168 kB]
170s Get:267 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-miniui all 0.1.2-1 [37.3 kB]
170s Get:268 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-shinyjs all 2.1.0-1build1 [967 kB]
170s Get:269 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-colourpicker all 1.3.0+dfsg-1 [1191 kB]
170s Get:270 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plotly all 4.10.4+dfsg-4 [3635 kB]
170s Get:271 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gridextra all 2.3-3build2 [1032 kB]
170s Get:272 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridis all 0.6.5-1 [2770 kB]
170s Get:273 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-dendextend all 1.19.1+dfsg-1 [1003 kB]
170s Get:274 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB]
170s Get:275 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-reshape2 amd64 1.4.4-2build2 [123 kB]
170s Get:276 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ca all 0.71.1-2build2 [242 kB]
170s Get:277 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cluster amd64 2.1.8.2-1 [570 kB]
170s Get:278 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB]
170s Get:279 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gclus all 1.3.3-1 [411 kB]
170s Get:280 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mass amd64 7.3-65-1 [1116 kB]
171s Get:281 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-qap amd64 0.1-2-1 [365 kB]
171s Get:282 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-registry all 0.5-1-2build2 [202 kB]
171s Get:283 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tsp amd64 1.2-4-1 [627 kB]
171s Get:284 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-permute all 0.9-8-1 [237 kB]
171s Get:285 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nlme amd64 3.1.168-1 [2320 kB]
171s Get:286 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mgcv amd64 1.9-4-1 [3556 kB]
171s Get:287 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vegan amd64 2.6-10+dfsg-3 [3137 kB]
171s Get:288 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-seriation amd64 1.5.7-1 [1343 kB]
171s Get:289 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ps amd64 1.9.0-1 [408 kB]
171s Get:290 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-processx amd64 3.8.6-1 [365 kB]
171s Get:291 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-callr all 3.7.6-1 [458 kB]
171s Get:292 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-webshot all 0.5.5-1 [185 kB]
171s Get:293 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-assertthat all 0.2.1-3 [57.6 kB]
171s Get:294 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-egg all 0.4.5-3build2 [836 kB]
171s Get:295 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-heatmaply all 1.6.0+dfsg-1 [283 kB]
172s Get:296 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpparmadillo amd64 15.2.3-1-1 [919 kB]
172s Get:297 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-bioc-degnorm amd64 1.16.0+ds-2 [1525 kB]
172s Preconfiguring packages ...
172s Fetched 364 MB in 12s (31.4 MB/s)
172s Selecting previously unselected package libc-dev-bin.
172s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 125269 files and directories currently installed.)
172s Preparing to unpack .../000-libc-dev-bin_2.42-2ubuntu4_amd64.deb ...
172s Unpacking libc-dev-bin (2.42-2ubuntu4) ...
172s Selecting previously unselected package linux-libc-dev:amd64.
172s Preparing to unpack .../001-linux-libc-dev_6.19.0-3.3_amd64.deb ...
172s Unpacking linux-libc-dev:amd64 (6.19.0-3.3) ...
172s Selecting previously unselected package libcrypt-dev:amd64.
172s Preparing to unpack .../002-libcrypt-dev_1%3a4.5.1-1_amd64.deb ...
172s Unpacking libcrypt-dev:amd64 (1:4.5.1-1) ...
172s Selecting previously unselected package rpcsvc-proto.
172s Preparing to unpack .../003-rpcsvc-proto_1.4.3-1build1_amd64.deb ...
172s Unpacking rpcsvc-proto (1.4.3-1build1) ...
172s Selecting previously unselected package libc6-dev:amd64.
172s Preparing to unpack .../004-libc6-dev_2.42-2ubuntu4_amd64.deb ...
172s Unpacking libc6-dev:amd64 (2.42-2ubuntu4) ...
172s Selecting previously unselected package libisl23:amd64.
172s Preparing to unpack .../005-libisl23_0.27-1build1_amd64.deb ...
172s Unpacking libisl23:amd64 (0.27-1build1) ...
172s Selecting previously unselected package libmpc3:amd64.
172s Preparing to unpack .../006-libmpc3_1.3.1-2_amd64.deb ...
172s Unpacking libmpc3:amd64 (1.3.1-2) ...
173s Selecting previously unselected package cpp-15-x86-64-linux-gnu.
173s Preparing to unpack .../007-cpp-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ...
173s Unpacking cpp-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
173s Selecting previously unselected package cpp-15.
173s Preparing to unpack .../008-cpp-15_15.2.0-12ubuntu1_amd64.deb ...
173s Unpacking cpp-15 (15.2.0-12ubuntu1) ...
173s Selecting previously unselected package cpp-x86-64-linux-gnu.
173s Preparing to unpack .../009-cpp-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ...
173s Unpacking cpp-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
173s Selecting previously unselected package cpp.
173s Preparing to unpack .../010-cpp_4%3a15.2.0-4ubuntu1_amd64.deb ...
173s Unpacking cpp (4:15.2.0-4ubuntu1) ...
173s Selecting previously unselected package libcc1-0:amd64.
173s Preparing to unpack .../011-libcc1-0_16-20260208-1ubuntu1_amd64.deb ...
173s Unpacking libcc1-0:amd64 (16-20260208-1ubuntu1) ...
173s Selecting previously unselected package libgomp1:amd64.
173s Preparing to unpack .../012-libgomp1_16-20260208-1ubuntu1_amd64.deb ...
173s Unpacking libgomp1:amd64 (16-20260208-1ubuntu1) ...
173s Selecting previously unselected package libitm1:amd64.
173s Preparing to unpack .../013-libitm1_16-20260208-1ubuntu1_amd64.deb ...
173s Unpacking libitm1:amd64 (16-20260208-1ubuntu1) ...
173s Selecting previously unselected package libasan8:amd64.
173s Preparing to unpack .../014-libasan8_16-20260208-1ubuntu1_amd64.deb ...
173s Unpacking libasan8:amd64 (16-20260208-1ubuntu1) ...
173s Selecting previously unselected package liblsan0:amd64.
173s Preparing to unpack .../015-liblsan0_16-20260208-1ubuntu1_amd64.deb ...
173s Unpacking liblsan0:amd64 (16-20260208-1ubuntu1) ...
173s Selecting previously unselected package libtsan2:amd64.
173s Preparing to unpack .../016-libtsan2_16-20260208-1ubuntu1_amd64.deb ...
173s Unpacking libtsan2:amd64 (16-20260208-1ubuntu1) ...
173s Selecting previously unselected package libubsan1:amd64.
173s Preparing to unpack .../017-libubsan1_16-20260208-1ubuntu1_amd64.deb ...
173s Unpacking libubsan1:amd64 (16-20260208-1ubuntu1) ...
173s Selecting previously unselected package libhwasan0:amd64.
173s Preparing to unpack .../018-libhwasan0_16-20260208-1ubuntu1_amd64.deb ...
173s Unpacking libhwasan0:amd64 (16-20260208-1ubuntu1) ...
173s Selecting previously unselected package libquadmath0:amd64.
173s Preparing to unpack .../019-libquadmath0_16-20260208-1ubuntu1_amd64.deb ...
173s Unpacking libquadmath0:amd64 (16-20260208-1ubuntu1) ...
173s Selecting previously unselected package libgcc-15-dev:amd64.
173s Preparing to unpack .../020-libgcc-15-dev_15.2.0-12ubuntu1_amd64.deb ...
173s Unpacking libgcc-15-dev:amd64 (15.2.0-12ubuntu1) ...
173s Selecting previously unselected package gcc-15-x86-64-linux-gnu.
173s Preparing to unpack .../021-gcc-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ...
173s Unpacking gcc-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
173s Selecting previously unselected package gcc-15.
173s Preparing to unpack .../022-gcc-15_15.2.0-12ubuntu1_amd64.deb ...
173s Unpacking gcc-15 (15.2.0-12ubuntu1) ...
173s Selecting previously unselected package gcc-x86-64-linux-gnu.
173s Preparing to unpack .../023-gcc-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ...
173s Unpacking gcc-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
173s Selecting previously unselected package gcc.
173s Preparing to unpack .../024-gcc_4%3a15.2.0-4ubuntu1_amd64.deb ...
173s Unpacking gcc (4:15.2.0-4ubuntu1) ...
173s Selecting previously unselected package libstdc++-15-dev:amd64.
173s Preparing to unpack .../025-libstdc++-15-dev_15.2.0-12ubuntu1_amd64.deb ...
173s Unpacking libstdc++-15-dev:amd64 (15.2.0-12ubuntu1) ...
173s Selecting previously unselected package g++-15-x86-64-linux-gnu.
173s Preparing to unpack .../026-g++-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ...
173s Unpacking g++-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
174s Selecting previously unselected package g++-15.
174s Preparing to unpack .../027-g++-15_15.2.0-12ubuntu1_amd64.deb ...
174s Unpacking g++-15 (15.2.0-12ubuntu1) ...
174s Selecting previously unselected package g++-x86-64-linux-gnu.
174s Preparing to unpack .../028-g++-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ...
174s Unpacking g++-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
174s Selecting previously unselected package g++.
174s Preparing to unpack .../029-g++_4%3a15.2.0-4ubuntu1_amd64.deb ...
174s Unpacking g++ (4:15.2.0-4ubuntu1) ...
174s Selecting previously unselected package build-essential.
174s Preparing to unpack .../030-build-essential_12.12ubuntu2_amd64.deb ...
174s Unpacking build-essential (12.12ubuntu2) ...
174s Selecting previously unselected package dctrl-tools.
174s Preparing to unpack .../031-dctrl-tools_2.24-3build4_amd64.deb ...
174s Unpacking dctrl-tools (2.24-3build4) ...
174s Selecting previously unselected package fonts-dejavu-mono.
174s Preparing to unpack .../032-fonts-dejavu-mono_2.37-8build1_all.deb ...
174s Unpacking fonts-dejavu-mono (2.37-8build1) ...
174s Selecting previously unselected package fonts-dejavu-core.
174s Preparing to unpack .../033-fonts-dejavu-core_2.37-8build1_all.deb ...
174s Unpacking fonts-dejavu-core (2.37-8build1) ...
174s Selecting previously unselected package fontconfig-config.
174s Preparing to unpack .../034-fontconfig-config_2.17.1-3ubuntu1_amd64.deb ...
174s Unpacking fontconfig-config (2.17.1-3ubuntu1) ...
174s Selecting previously unselected package libfontconfig1:amd64.
174s Preparing to unpack .../035-libfontconfig1_2.17.1-3ubuntu1_amd64.deb ...
174s Unpacking libfontconfig1:amd64 (2.17.1-3ubuntu1) ...
174s Selecting previously unselected package fontconfig.
174s Preparing to unpack .../036-fontconfig_2.17.1-3ubuntu1_amd64.deb ...
174s Unpacking fontconfig (2.17.1-3ubuntu1) ...
174s Selecting previously unselected package fonts-font-awesome.
174s Preparing to unpack .../037-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1build1_all.deb ...
174s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ...
174s Selecting previously unselected package fonts-glyphicons-halflings.
174s Preparing to unpack .../038-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-6_all.deb ...
174s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ...
174s Selecting previously unselected package fonts-mathjax.
174s Preparing to unpack .../039-fonts-mathjax_2.7.9+dfsg-1build1_all.deb ...
174s Unpacking fonts-mathjax (2.7.9+dfsg-1build1) ...
174s Selecting previously unselected package libgfortran5:amd64.
174s Preparing to unpack .../040-libgfortran5_16-20260208-1ubuntu1_amd64.deb ...
174s Unpacking libgfortran5:amd64 (16-20260208-1ubuntu1) ...
174s Selecting previously unselected package libgfortran-15-dev:amd64.
174s Preparing to unpack .../041-libgfortran-15-dev_15.2.0-12ubuntu1_amd64.deb ...
174s Unpacking libgfortran-15-dev:amd64 (15.2.0-12ubuntu1) ...
174s Selecting previously unselected package gfortran-15-x86-64-linux-gnu.
174s Preparing to unpack .../042-gfortran-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ...
174s Unpacking gfortran-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
174s Selecting previously unselected package gfortran-15.
174s Preparing to unpack .../043-gfortran-15_15.2.0-12ubuntu1_amd64.deb ...
174s Unpacking gfortran-15 (15.2.0-12ubuntu1) ...
174s Selecting previously unselected package gfortran-x86-64-linux-gnu.
174s Preparing to unpack .../044-gfortran-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ...
174s Unpacking gfortran-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
174s Selecting previously unselected package gfortran.
174s Preparing to unpack .../045-gfortran_4%3a15.2.0-4ubuntu1_amd64.deb ...
174s Unpacking gfortran (4:15.2.0-4ubuntu1) ...
174s Selecting previously unselected package icu-devtools.
174s Preparing to unpack .../046-icu-devtools_78.2-1ubuntu1_amd64.deb ...
174s Unpacking icu-devtools (78.2-1ubuntu1) ...
174s Selecting previously unselected package javascript-common.
174s Preparing to unpack .../047-javascript-common_12+nmu1build1_all.deb ...
174s Unpacking javascript-common (12+nmu1build1) ...
174s Selecting previously unselected package libblas3:amd64.
174s Preparing to unpack .../048-libblas3_3.12.1-7ubuntu1_amd64.deb ...
174s Unpacking libblas3:amd64 (3.12.1-7ubuntu1) ...
174s Selecting previously unselected package libblas-dev:amd64.
174s Preparing to unpack .../049-libblas-dev_3.12.1-7ubuntu1_amd64.deb ...
174s Unpacking libblas-dev:amd64 (3.12.1-7ubuntu1) ...
174s Selecting previously unselected package libboost1.90-dev:amd64.
174s Preparing to unpack .../050-libboost1.90-dev_1.90.0-2ubuntu1_amd64.deb ...
174s Unpacking libboost1.90-dev:amd64 (1.90.0-2ubuntu1) ...
175s Selecting previously unselected package libboost-dev:amd64.
175s Preparing to unpack .../051-libboost-dev_1.90.0.0ubuntu3_amd64.deb ...
175s Unpacking libboost-dev:amd64 (1.90.0.0ubuntu3) ...
175s Selecting previously unselected package libbz2-dev:amd64.
175s Preparing to unpack .../052-libbz2-dev_1.0.8-6build2_amd64.deb ...
175s Unpacking libbz2-dev:amd64 (1.0.8-6build2) ...
175s Selecting previously unselected package libpixman-1-0:amd64.
175s Preparing to unpack .../053-libpixman-1-0_0.46.4-1_amd64.deb ...
175s Unpacking libpixman-1-0:amd64 (0.46.4-1) ...
175s Selecting previously unselected package libxcb-render0:amd64.
175s Preparing to unpack .../054-libxcb-render0_1.17.0-2ubuntu1_amd64.deb ...
175s Unpacking libxcb-render0:amd64 (1.17.0-2ubuntu1) ...
175s Selecting previously unselected package libxcb-shm0:amd64.
175s Preparing to unpack .../055-libxcb-shm0_1.17.0-2ubuntu1_amd64.deb ...
175s Unpacking libxcb-shm0:amd64 (1.17.0-2ubuntu1) ...
175s Selecting previously unselected package libxrender1:amd64.
175s Preparing to unpack .../056-libxrender1_1%3a0.9.12-1_amd64.deb ...
175s Unpacking libxrender1:amd64 (1:0.9.12-1) ...
175s Selecting previously unselected package libcairo2:amd64.
175s Preparing to unpack .../057-libcairo2_1.18.4-3_amd64.deb ...
175s Unpacking libcairo2:amd64 (1.18.4-3) ...
175s Selecting previously unselected package libdatrie1:amd64.
175s Preparing to unpack .../058-libdatrie1_0.2.14-1_amd64.deb ...
175s Unpacking libdatrie1:amd64 (0.2.14-1) ...
175s Selecting previously unselected package libdeflate0:amd64.
175s Preparing to unpack .../059-libdeflate0_1.23-2build1_amd64.deb ...
175s Unpacking libdeflate0:amd64 (1.23-2build1) ...
175s Selecting previously unselected package libdeflate-dev:amd64.
175s Preparing to unpack .../060-libdeflate-dev_1.23-2build1_amd64.deb ...
175s Unpacking libdeflate-dev:amd64 (1.23-2build1) ...
175s Selecting previously unselected package libgraphite2-3:amd64.
175s Preparing to unpack .../061-libgraphite2-3_1.3.14-11ubuntu1_amd64.deb ...
175s Unpacking libgraphite2-3:amd64 (1.3.14-11ubuntu1) ...
175s Selecting previously unselected package libharfbuzz0b:amd64.
175s Preparing to unpack .../062-libharfbuzz0b_12.3.2-1_amd64.deb ...
175s Unpacking libharfbuzz0b:amd64 (12.3.2-1) ...
175s Selecting previously unselected package x11-common.
175s Preparing to unpack .../063-x11-common_1%3a7.7+24ubuntu1_all.deb ...
175s Unpacking x11-common (1:7.7+24ubuntu1) ...
175s Selecting previously unselected package libice6:amd64.
175s Preparing to unpack .../064-libice6_2%3a1.1.1-1build1_amd64.deb ...
175s Unpacking libice6:amd64 (2:1.1.1-1build1) ...
175s Selecting previously unselected package libicu-dev:amd64.
175s Preparing to unpack .../065-libicu-dev_78.2-1ubuntu1_amd64.deb ...
175s Unpacking libicu-dev:amd64 (78.2-1ubuntu1) ...
176s Selecting previously unselected package libjpeg-turbo8:amd64.
176s Preparing to unpack .../066-libjpeg-turbo8_2.1.5-4ubuntu3_amd64.deb ...
176s Unpacking libjpeg-turbo8:amd64 (2.1.5-4ubuntu3) ...
176s Selecting previously unselected package libjpeg-turbo8-dev:amd64.
176s Preparing to unpack .../067-libjpeg-turbo8-dev_2.1.5-4ubuntu3_amd64.deb ...
176s Unpacking libjpeg-turbo8-dev:amd64 (2.1.5-4ubuntu3) ...
176s Selecting previously unselected package libjpeg8:amd64.
176s Preparing to unpack .../068-libjpeg8_8c-2ubuntu12_amd64.deb ...
176s Unpacking libjpeg8:amd64 (8c-2ubuntu12) ...
176s Selecting previously unselected package libjpeg8-dev:amd64.
176s Preparing to unpack .../069-libjpeg8-dev_8c-2ubuntu12_amd64.deb ...
176s Unpacking libjpeg8-dev:amd64 (8c-2ubuntu12) ...
176s Selecting previously unselected package libjpeg-dev:amd64.
176s Preparing to unpack .../070-libjpeg-dev_8c-2ubuntu12_amd64.deb ...
176s Unpacking libjpeg-dev:amd64 (8c-2ubuntu12) ...
176s Selecting previously unselected package libjs-bootstrap.
176s Preparing to unpack .../071-libjs-bootstrap_3.4.1+dfsg-6_all.deb ...
176s Unpacking libjs-bootstrap (3.4.1+dfsg-6) ...
176s Selecting previously unselected package libjs-popper.js.
176s Preparing to unpack .../072-libjs-popper.js_1.16.1+ds-6build1_all.deb ...
176s Unpacking libjs-popper.js (1.16.1+ds-6build1) ...
176s Selecting previously unselected package libjs-bootstrap4.
176s Preparing to unpack .../073-libjs-bootstrap4_4.6.2+dfsg-1_all.deb ...
176s Unpacking libjs-bootstrap4 (4.6.2+dfsg-1) ...
176s Selecting previously unselected package libjs-d3.
176s Preparing to unpack .../074-libjs-d3_3.5.17-4build1_all.deb ...
176s Unpacking libjs-d3 (3.5.17-4build1) ...
176s Selecting previously unselected package libjs-es5-shim.
176s Preparing to unpack .../075-libjs-es5-shim_4.6.7-2_all.deb ...
176s Unpacking libjs-es5-shim (4.6.7-2) ...
176s Selecting previously unselected package libjs-highlight.js.
176s Preparing to unpack .../076-libjs-highlight.js_10.7.3+dfsg-2_all.deb ...
176s Unpacking libjs-highlight.js (10.7.3+dfsg-2) ...
176s Selecting previously unselected package libjs-jquery.
176s Preparing to unpack .../077-libjs-jquery_3.7.1+dfsg+~3.5.33-1build1_all.deb ...
176s Unpacking libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ...
176s Selecting previously unselected package libjs-jquery-datatables.
176s Preparing to unpack .../078-libjs-jquery-datatables_1.11.5+dfsg-2build1_all.deb ...
176s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2build1) ...
176s Selecting previously unselected package libjs-sifter.js.
176s Preparing to unpack .../079-libjs-sifter.js_0.6.0+dfsg-3_all.deb ...
176s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ...
176s Selecting previously unselected package libjs-microplugin.js.
176s Preparing to unpack .../080-libjs-microplugin.js_0.0.3+dfsg-2_all.deb ...
176s Unpacking libjs-microplugin.js (0.0.3+dfsg-2) ...
176s Selecting previously unselected package libjs-jquery-selectize.js.
176s Preparing to unpack .../081-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ...
176s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ...
176s Selecting previously unselected package libjs-jquery-ui.
176s Preparing to unpack .../082-libjs-jquery-ui_1.13.2+dfsg-1build1_all.deb ...
176s Unpacking libjs-jquery-ui (1.13.2+dfsg-1build1) ...
176s Selecting previously unselected package libjs-json.
176s Preparing to unpack .../083-libjs-json_0~20221030+~1.0.8-1build1_all.deb ...
176s Unpacking libjs-json (0~20221030+~1.0.8-1build1) ...
176s Selecting previously unselected package libjs-prettify.
176s Preparing to unpack .../084-libjs-prettify_2015.12.04+dfsg-3_all.deb ...
176s Unpacking libjs-prettify (2015.12.04+dfsg-3) ...
176s Selecting previously unselected package liblapack3:amd64.
176s Preparing to unpack .../085-liblapack3_3.12.1-7ubuntu1_amd64.deb ...
176s Unpacking liblapack3:amd64 (3.12.1-7ubuntu1) ...
176s Selecting previously unselected package liblapack-dev:amd64.
176s Preparing to unpack .../086-liblapack-dev_3.12.1-7ubuntu1_amd64.deb ...
176s Unpacking liblapack-dev:amd64 (3.12.1-7ubuntu1) ...
176s Selecting previously unselected package liblerc4:amd64.
176s Preparing to unpack .../087-liblerc4_4.0.0+ds-5ubuntu2_amd64.deb ...
176s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu2) ...
176s Selecting previously unselected package liblua5.4-0:amd64.
176s Preparing to unpack .../088-liblua5.4-0_5.4.8-1_amd64.deb ...
176s Unpacking liblua5.4-0:amd64 (5.4.8-1) ...
176s Selecting previously unselected package libncurses-dev:amd64.
176s Preparing to unpack .../089-libncurses-dev_6.6+20251231-1_amd64.deb ...
176s Unpacking libncurses-dev:amd64 (6.6+20251231-1) ...
176s Selecting previously unselected package libthai-data.
176s Preparing to unpack .../090-libthai-data_0.1.30-1_all.deb ...
176s Unpacking libthai-data (0.1.30-1) ...
176s Selecting previously unselected package libthai0:amd64.
176s Preparing to unpack .../091-libthai0_0.1.30-1_amd64.deb ...
176s Unpacking libthai0:amd64 (0.1.30-1) ...
176s Selecting previously unselected package libpango-1.0-0:amd64.
176s Preparing to unpack .../092-libpango-1.0-0_1.57.0-1_amd64.deb ...
176s Unpacking libpango-1.0-0:amd64 (1.57.0-1) ...
176s Selecting previously unselected package libpangoft2-1.0-0:amd64.
176s Preparing to unpack .../093-libpangoft2-1.0-0_1.57.0-1_amd64.deb ...
176s Unpacking libpangoft2-1.0-0:amd64 (1.57.0-1) ...
176s Selecting previously unselected package libpangocairo-1.0-0:amd64.
176s Preparing to unpack .../094-libpangocairo-1.0-0_1.57.0-1_amd64.deb ...
176s Unpacking libpangocairo-1.0-0:amd64 (1.57.0-1) ...
176s Selecting previously unselected package libpaper2:amd64.
176s Preparing to unpack .../095-libpaper2_2.2.5-0.3build1_amd64.deb ...
176s Unpacking libpaper2:amd64 (2.2.5-0.3build1) ...
176s Selecting previously unselected package libpaper-utils.
176s Preparing to unpack .../096-libpaper-utils_2.2.5-0.3build1_amd64.deb ...
176s Unpacking libpaper-utils (2.2.5-0.3build1) ...
176s Selecting previously unselected package libpcre2-16-0:amd64.
176s Preparing to unpack .../097-libpcre2-16-0_10.46-1_amd64.deb ...
176s Unpacking libpcre2-16-0:amd64 (10.46-1) ...
176s Selecting previously unselected package libpcre2-32-0:amd64.
176s Preparing to unpack .../098-libpcre2-32-0_10.46-1_amd64.deb ...
176s Unpacking libpcre2-32-0:amd64 (10.46-1) ...
176s Selecting previously unselected package libpcre2-posix3:amd64.
176s Preparing to unpack .../099-libpcre2-posix3_10.46-1_amd64.deb ...
176s Unpacking libpcre2-posix3:amd64 (10.46-1) ...
176s Selecting previously unselected package libpcre2-dev:amd64.
176s Preparing to unpack .../100-libpcre2-dev_10.46-1_amd64.deb ...
176s Unpacking libpcre2-dev:amd64 (10.46-1) ...
177s Selecting previously unselected package libpkgconf3:amd64.
177s Preparing to unpack .../101-libpkgconf3_1.8.1-4build1_amd64.deb ...
177s Unpacking libpkgconf3:amd64 (1.8.1-4build1) ...
177s Selecting previously unselected package zlib1g-dev:amd64.
177s Preparing to unpack .../102-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_amd64.deb ...
177s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ...
177s Selecting previously unselected package libpng-dev:amd64.
177s Preparing to unpack .../103-libpng-dev_1.6.54-1_amd64.deb ...
177s Unpacking libpng-dev:amd64 (1.6.54-1) ...
177s Selecting previously unselected package libreadline-dev:amd64.
177s Preparing to unpack .../104-libreadline-dev_8.3-3_amd64.deb ...
177s Unpacking libreadline-dev:amd64 (8.3-3) ...
177s Selecting previously unselected package libsharpyuv0:amd64.
177s Preparing to unpack .../105-libsharpyuv0_1.5.0-0.1build1_amd64.deb ...
177s Unpacking libsharpyuv0:amd64 (1.5.0-0.1build1) ...
177s Selecting previously unselected package libsm6:amd64.
177s Preparing to unpack .../106-libsm6_2%3a1.2.6-1build1_amd64.deb ...
177s Unpacking libsm6:amd64 (2:1.2.6-1build1) ...
177s Selecting previously unselected package libtcl8.6:amd64.
177s Preparing to unpack .../107-libtcl8.6_8.6.17+dfsg-1build1_amd64.deb ...
177s Unpacking libtcl8.6:amd64 (8.6.17+dfsg-1build1) ...
177s Selecting previously unselected package libjbig0:amd64.
177s Preparing to unpack .../108-libjbig0_2.1-6.1ubuntu3_amd64.deb ...
177s Unpacking libjbig0:amd64 (2.1-6.1ubuntu3) ...
177s Selecting previously unselected package libwebp7:amd64.
177s Preparing to unpack .../109-libwebp7_1.5.0-0.1build1_amd64.deb ...
177s Unpacking libwebp7:amd64 (1.5.0-0.1build1) ...
177s Selecting previously unselected package libtiff6:amd64.
177s Preparing to unpack .../110-libtiff6_4.7.0-3ubuntu3_amd64.deb ...
177s Unpacking libtiff6:amd64 (4.7.0-3ubuntu3) ...
177s Selecting previously unselected package libxft2:amd64.
177s Preparing to unpack .../111-libxft2_2.3.6-1build2_amd64.deb ...
177s Unpacking libxft2:amd64 (2.3.6-1build2) ...
177s Selecting previously unselected package libxss1:amd64.
177s Preparing to unpack .../112-libxss1_1%3a1.2.3-1build4_amd64.deb ...
177s Unpacking libxss1:amd64 (1:1.2.3-1build4) ...
177s Selecting previously unselected package libtk8.6:amd64.
177s Preparing to unpack .../113-libtk8.6_8.6.17-1_amd64.deb ...
177s Unpacking libtk8.6:amd64 (8.6.17-1) ...
177s Selecting previously unselected package libxt6t64:amd64.
177s Preparing to unpack .../114-libxt6t64_1%3a1.2.1-1.3_amd64.deb ...
177s Unpacking libxt6t64:amd64 (1:1.2.1-1.3) ...
177s Selecting previously unselected package libzstd-dev:amd64.
177s Preparing to unpack .../115-libzstd-dev_1.5.7+dfsg-3_amd64.deb ...
177s Unpacking libzstd-dev:amd64 (1.5.7+dfsg-3) ...
177s Selecting previously unselected package node-bootstrap-sass.
177s Preparing to unpack .../116-node-bootstrap-sass_3.4.3-2_all.deb ...
177s Unpacking node-bootstrap-sass (3.4.3-2) ...
177s Selecting previously unselected package node-html5shiv.
177s Preparing to unpack .../117-node-html5shiv_3.7.3+dfsg-5_all.deb ...
177s Unpacking node-html5shiv (3.7.3+dfsg-5) ...
177s Selecting previously unselected package node-normalize.css.
177s Preparing to unpack .../118-node-normalize.css_8.0.1-5.1_all.deb ...
177s Unpacking node-normalize.css (8.0.1-5.1) ...
177s Selecting previously unselected package pandoc-data.
177s Preparing to unpack .../119-pandoc-data_3.1.11.1-3build1_all.deb ...
177s Unpacking pandoc-data (3.1.11.1-3build1) ...
177s Selecting previously unselected package pandoc.
177s Preparing to unpack .../120-pandoc_3.1.11.1+ds-4_amd64.deb ...
177s Unpacking pandoc (3.1.11.1+ds-4) ...
177s Selecting previously unselected package zip.
177s Preparing to unpack .../121-zip_3.0-15ubuntu3_amd64.deb ...
177s Unpacking zip (3.0-15ubuntu3) ...
177s Selecting previously unselected package unzip.
177s Preparing to unpack .../122-unzip_6.0-29ubuntu1_amd64.deb ...
177s Unpacking unzip (6.0-29ubuntu1) ...
177s Selecting previously unselected package xdg-utils.
177s Preparing to unpack .../123-xdg-utils_1.2.1-2ubuntu2_all.deb ...
177s Unpacking xdg-utils (1.2.1-2ubuntu2) ...
177s Selecting previously unselected package r-base-core.
177s Preparing to unpack .../124-r-base-core_4.5.2-1ubuntu2_amd64.deb ...
177s Unpacking r-base-core (4.5.2-1ubuntu2) ...
178s Selecting previously unselected package liblzma-dev:amd64.
178s Preparing to unpack .../125-liblzma-dev_5.8.2-2_amd64.deb ...
178s Unpacking liblzma-dev:amd64 (5.8.2-2) ...
178s Selecting previously unselected package pkgconf-bin.
178s Preparing to unpack .../126-pkgconf-bin_1.8.1-4build1_amd64.deb ...
178s Unpacking pkgconf-bin (1.8.1-4build1) ...
178s Selecting previously unselected package pkgconf:amd64.
178s Preparing to unpack .../127-pkgconf_1.8.1-4build1_amd64.deb ...
178s Unpacking pkgconf:amd64 (1.8.1-4build1) ...
178s Selecting previously unselected package libtirpc-dev:amd64.
178s Preparing to unpack .../128-libtirpc-dev_1.3.6+ds-1_amd64.deb ...
178s Unpacking libtirpc-dev:amd64 (1.3.6+ds-1) ...
178s Selecting previously unselected package r-base-dev.
178s Preparing to unpack .../129-r-base-dev_4.5.2-1ubuntu2_all.deb ...
178s Unpacking r-base-dev (4.5.2-1ubuntu2) ...
178s Selecting previously unselected package pkg-r-autopkgtest.
178s Preparing to unpack .../130-pkg-r-autopkgtest_20250812_all.deb ...
178s Unpacking pkg-r-autopkgtest (20250812) ...
178s Selecting previously unselected package r-bioc-biocgenerics.
178s Preparing to unpack .../131-r-bioc-biocgenerics_0.52.0-2_all.deb ...
178s Unpacking r-bioc-biocgenerics (0.52.0-2) ...
178s Selecting previously unselected package r-bioc-biobase.
178s Preparing to unpack .../132-r-bioc-biobase_2.66.0-2_amd64.deb ...
178s Unpacking r-bioc-biobase (2.66.0-2) ...
178s Selecting previously unselected package r-bioc-s4vectors.
178s Preparing to unpack .../133-r-bioc-s4vectors_0.44.0+dfsg-2_amd64.deb ...
178s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ...
178s Selecting previously unselected package r-bioc-iranges.
178s Preparing to unpack .../134-r-bioc-iranges_2.40.1-3_amd64.deb ...
178s Unpacking r-bioc-iranges (2.40.1-3) ...
178s Selecting previously unselected package r-cran-dbi.
178s Preparing to unpack .../135-r-cran-dbi_1.2.3-1build1_all.deb ...
178s Unpacking r-cran-dbi (1.2.3-1build1) ...
178s Selecting previously unselected package r-cran-bit.
178s Preparing to unpack .../136-r-cran-bit_4.6.0+dfsg-1_amd64.deb ...
178s Unpacking r-cran-bit (4.6.0+dfsg-1) ...
178s Selecting previously unselected package r-cran-bit64.
178s Preparing to unpack .../137-r-cran-bit64_4.6.0-1-4_amd64.deb ...
178s Unpacking r-cran-bit64 (4.6.0-1-4) ...
178s Selecting previously unselected package r-cran-rlang.
178s Preparing to unpack .../138-r-cran-rlang_1.1.5-3_amd64.deb ...
178s Unpacking r-cran-rlang (1.1.5-3) ...
178s Selecting previously unselected package r-cran-cli.
178s Preparing to unpack .../139-r-cran-cli_3.6.4-1_amd64.deb ...
178s Unpacking r-cran-cli (3.6.4-1) ...
178s Selecting previously unselected package r-cran-glue.
178s Preparing to unpack .../140-r-cran-glue_1.8.0-1_amd64.deb ...
178s Unpacking r-cran-glue (1.8.0-1) ...
178s Selecting previously unselected package r-cran-lifecycle.
178s Preparing to unpack .../141-r-cran-lifecycle_1.0.5+dfsg-1_all.deb ...
178s Unpacking r-cran-lifecycle (1.0.5+dfsg-1) ...
178s Selecting previously unselected package r-cran-vctrs.
178s Preparing to unpack .../142-r-cran-vctrs_0.6.5-1_amd64.deb ...
178s Unpacking r-cran-vctrs (0.6.5-1) ...
178s Selecting previously unselected package r-cran-blob.
178s Preparing to unpack .../143-r-cran-blob_1.3.0-1_all.deb ...
178s Unpacking r-cran-blob (1.3.0-1) ...
178s Selecting previously unselected package r-cran-fastmap.
178s Preparing to unpack .../144-r-cran-fastmap_1.2.0-1_amd64.deb ...
178s Unpacking r-cran-fastmap (1.2.0-1) ...
178s Selecting previously unselected package r-cran-cachem.
178s Preparing to unpack .../145-r-cran-cachem_1.1.0-1_amd64.deb ...
178s Unpacking r-cran-cachem (1.1.0-1) ...
178s Selecting previously unselected package r-cran-memoise.
178s Preparing to unpack .../146-r-cran-memoise_2.0.1-1build1_all.deb ...
178s Unpacking r-cran-memoise (2.0.1-1build1) ...
178s Selecting previously unselected package r-cran-pkgconfig.
178s Preparing to unpack .../147-r-cran-pkgconfig_2.0.3-2build2_all.deb ...
178s Unpacking r-cran-pkgconfig (2.0.3-2build2) ...
178s Selecting previously unselected package r-cran-plogr.
178s Preparing to unpack .../148-r-cran-plogr_0.2.0-3build2_all.deb ...
178s Unpacking r-cran-plogr (0.2.0-3build2) ...
178s Selecting previously unselected package r-cran-cpp11.
178s Preparing to unpack .../149-r-cran-cpp11_0.5.3-1_all.deb ...
178s Unpacking r-cran-cpp11 (0.5.3-1) ...
178s Selecting previously unselected package r-cran-rsqlite.
178s Preparing to unpack .../150-r-cran-rsqlite_2.3.9-1_amd64.deb ...
178s Unpacking r-cran-rsqlite (2.3.9-1) ...
178s Selecting previously unselected package r-cran-curl.
178s Preparing to unpack .../151-r-cran-curl_7.0.0+dfsg-1_amd64.deb ...
178s Unpacking r-cran-curl (7.0.0+dfsg-1) ...
178s Selecting previously unselected package r-cran-jsonlite.
178s Preparing to unpack .../152-r-cran-jsonlite_1.9.1+dfsg-1_amd64.deb ...
178s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ...
178s Selecting previously unselected package r-cran-mime.
178s Preparing to unpack .../153-r-cran-mime_0.12-2_amd64.deb ...
178s Unpacking r-cran-mime (0.12-2) ...
178s Selecting previously unselected package r-cran-sys.
178s Preparing to unpack .../154-r-cran-sys_3.4.3-1_amd64.deb ...
178s Unpacking r-cran-sys (3.4.3-1) ...
178s Selecting previously unselected package r-cran-askpass.
178s Preparing to unpack .../155-r-cran-askpass_1.2.1-1_amd64.deb ...
178s Unpacking r-cran-askpass (1.2.1-1) ...
178s Selecting previously unselected package r-cran-openssl.
178s Preparing to unpack .../156-r-cran-openssl_2.3.2+dfsg-1_amd64.deb ...
178s Unpacking r-cran-openssl (2.3.2+dfsg-1) ...
178s Selecting previously unselected package r-cran-r6.
178s Preparing to unpack .../157-r-cran-r6_2.6.1-1_all.deb ...
178s Unpacking r-cran-r6 (2.6.1-1) ...
178s Selecting previously unselected package r-cran-httr.
178s Preparing to unpack .../158-r-cran-httr_1.4.7+dfsg-1_all.deb ...
178s Unpacking r-cran-httr (1.4.7+dfsg-1) ...
178s Selecting previously unselected package r-cran-png.
178s Preparing to unpack .../159-r-cran-png_0.1-8-1build2_amd64.deb ...
178s Unpacking r-cran-png (0.1-8-1build2) ...
178s Selecting previously unselected package r-bioc-zlibbioc.
178s Preparing to unpack .../160-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ...
178s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ...
178s Selecting previously unselected package r-bioc-xvector.
178s Preparing to unpack .../161-r-bioc-xvector_0.46.0-2_amd64.deb ...
178s Unpacking r-bioc-xvector (0.46.0-2) ...
178s Selecting previously unselected package r-bioc-ucsc.utils.
178s Preparing to unpack .../162-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ...
178s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ...
178s Selecting previously unselected package r-bioc-genomeinfodbdata.
178s Preparing to unpack .../163-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ...
178s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ...
179s Selecting previously unselected package r-bioc-genomeinfodb.
179s Preparing to unpack .../164-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ...
179s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ...
179s Selecting previously unselected package r-cran-crayon.
179s Preparing to unpack .../165-r-cran-crayon_1.5.3-1_all.deb ...
179s Unpacking r-cran-crayon (1.5.3-1) ...
179s Selecting previously unselected package r-bioc-biostrings.
179s Preparing to unpack .../166-r-bioc-biostrings_2.74.1+dfsg-2_amd64.deb ...
179s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ...
179s Selecting previously unselected package r-bioc-keggrest.
179s Preparing to unpack .../167-r-bioc-keggrest_1.46.0+dfsg-3_all.deb ...
179s Unpacking r-bioc-keggrest (1.46.0+dfsg-3) ...
179s Selecting previously unselected package r-bioc-annotationdbi.
179s Preparing to unpack .../168-r-bioc-annotationdbi_1.68.0-2_all.deb ...
179s Unpacking r-bioc-annotationdbi (1.68.0-2) ...
179s Selecting previously unselected package r-cran-generics.
179s Preparing to unpack .../169-r-cran-generics_0.1.4-1_all.deb ...
179s Unpacking r-cran-generics (0.1.4-1) ...
179s Selecting previously unselected package r-cran-magrittr.
179s Preparing to unpack .../170-r-cran-magrittr_2.0.3-1_amd64.deb ...
179s Unpacking r-cran-magrittr (2.0.3-1) ...
179s Selecting previously unselected package r-cran-utf8.
179s Preparing to unpack .../171-r-cran-utf8_1.2.4-1_amd64.deb ...
179s Unpacking r-cran-utf8 (1.2.4-1) ...
179s Selecting previously unselected package r-cran-pillar.
179s Preparing to unpack .../172-r-cran-pillar_1.11.1+dfsg-1_all.deb ...
179s Unpacking r-cran-pillar (1.11.1+dfsg-1) ...
179s Selecting previously unselected package r-cran-fansi.
179s Preparing to unpack .../173-r-cran-fansi_1.0.6-2_amd64.deb ...
179s Unpacking r-cran-fansi (1.0.6-2) ...
179s Selecting previously unselected package r-cran-tibble.
179s Preparing to unpack .../174-r-cran-tibble_3.2.1+dfsg-3_amd64.deb ...
179s Unpacking r-cran-tibble (3.2.1+dfsg-3) ...
179s Selecting previously unselected package r-cran-withr.
179s Preparing to unpack .../175-r-cran-withr_3.0.2+dfsg-1_all.deb ...
179s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
179s Selecting previously unselected package r-cran-tidyselect.
179s Preparing to unpack .../176-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ...
179s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ...
179s Selecting previously unselected package r-cran-dplyr.
179s Preparing to unpack .../177-r-cran-dplyr_1.1.4-4_amd64.deb ...
179s Unpacking r-cran-dplyr (1.1.4-4) ...
179s Selecting previously unselected package r-cran-purrr.
179s Preparing to unpack .../178-r-cran-purrr_1.0.4-1_amd64.deb ...
179s Unpacking r-cran-purrr (1.0.4-1) ...
179s Selecting previously unselected package r-cran-stringi.
179s Preparing to unpack .../179-r-cran-stringi_1.8.4-1build2_amd64.deb ...
179s Unpacking r-cran-stringi (1.8.4-1build2) ...
179s Selecting previously unselected package r-cran-stringr.
179s Preparing to unpack .../180-r-cran-stringr_1.5.1-1_all.deb ...
179s Unpacking r-cran-stringr (1.5.1-1) ...
179s Selecting previously unselected package r-cran-tidyr.
179s Preparing to unpack .../181-r-cran-tidyr_1.3.1-1_amd64.deb ...
179s Unpacking r-cran-tidyr (1.3.1-1) ...
179s Selecting previously unselected package r-cran-dbplyr.
179s Preparing to unpack .../182-r-cran-dbplyr_2.5.1+dfsg-1_all.deb ...
179s Unpacking r-cran-dbplyr (2.5.1+dfsg-1) ...
179s Selecting previously unselected package r-cran-filelock.
179s Preparing to unpack .../183-r-cran-filelock_1.0.3-1_amd64.deb ...
179s Unpacking r-cran-filelock (1.0.3-1) ...
179s Selecting previously unselected package r-bioc-biocfilecache.
179s Preparing to unpack .../184-r-bioc-biocfilecache_2.14.0+dfsg-2_all.deb ...
179s Unpacking r-bioc-biocfilecache (2.14.0+dfsg-2) ...
179s Selecting previously unselected package r-bioc-biocio.
179s Preparing to unpack .../185-r-bioc-biocio_1.16.0+dfsg-2_all.deb ...
179s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ...
179s Selecting previously unselected package r-cran-formatr.
179s Preparing to unpack .../186-r-cran-formatr_1.14-2_all.deb ...
179s Unpacking r-cran-formatr (1.14-2) ...
179s Selecting previously unselected package r-cran-lambda.r.
179s Preparing to unpack .../187-r-cran-lambda.r_1.2.4-2build2_all.deb ...
179s Unpacking r-cran-lambda.r (1.2.4-2build2) ...
179s Selecting previously unselected package r-cran-futile.options.
179s Preparing to unpack .../188-r-cran-futile.options_1.0.1-3build2_all.deb ...
179s Unpacking r-cran-futile.options (1.0.1-3build2) ...
179s Selecting previously unselected package r-cran-futile.logger.
179s Preparing to unpack .../189-r-cran-futile.logger_1.4.3-4build2_all.deb ...
179s Unpacking r-cran-futile.logger (1.4.3-4build2) ...
179s Selecting previously unselected package r-cran-snow.
179s Preparing to unpack .../190-r-cran-snow_1%3a0.4.4-2build1_all.deb ...
179s Unpacking r-cran-snow (1:0.4.4-2build1) ...
179s Selecting previously unselected package r-cran-codetools.
179s Preparing to unpack .../191-r-cran-codetools_0.2-20-1build1_all.deb ...
179s Unpacking r-cran-codetools (0.2-20-1build1) ...
179s Selecting previously unselected package r-cran-bh.
179s Preparing to unpack .../192-r-cran-bh_1.84.0-1_all.deb ...
179s Unpacking r-cran-bh (1.84.0-1) ...
179s Selecting previously unselected package r-bioc-biocparallel.
179s Preparing to unpack .../193-r-bioc-biocparallel_1.40.0-2_amd64.deb ...
179s Unpacking r-bioc-biocparallel (1.40.0-2) ...
179s Selecting previously unselected package r-cran-hms.
179s Preparing to unpack .../194-r-cran-hms_1.1.4-1_all.deb ...
179s Unpacking r-cran-hms (1.1.4-1) ...
179s Selecting previously unselected package r-cran-prettyunits.
179s Preparing to unpack .../195-r-cran-prettyunits_1.2.0-1_all.deb ...
179s Unpacking r-cran-prettyunits (1.2.0-1) ...
179s Selecting previously unselected package r-cran-progress.
179s Preparing to unpack .../196-r-cran-progress_1.2.3-1_all.deb ...
179s Unpacking r-cran-progress (1.2.3-1) ...
179s Selecting previously unselected package r-cran-rappdirs.
179s Preparing to unpack .../197-r-cran-rappdirs_0.3.3-1build1_amd64.deb ...
179s Unpacking r-cran-rappdirs (0.3.3-1build1) ...
179s Selecting previously unselected package r-cran-httr2.
179s Preparing to unpack .../198-r-cran-httr2_1.1.1-2_all.deb ...
179s Unpacking r-cran-httr2 (1.1.1-2) ...
179s Selecting previously unselected package r-cran-digest.
179s Preparing to unpack .../199-r-cran-digest_0.6.39-1_amd64.deb ...
179s Unpacking r-cran-digest (0.6.39-1) ...
179s Selecting previously unselected package r-cran-xml2.
179s Preparing to unpack .../200-r-cran-xml2_1.4.1-1_amd64.deb ...
179s Unpacking r-cran-xml2 (1.4.1-1) ...
179s Selecting previously unselected package r-bioc-biomart.
179s Preparing to unpack .../201-r-bioc-biomart_2.62.1+dfsg-1_all.deb ...
179s Unpacking r-bioc-biomart (2.62.1+dfsg-1) ...
179s Selecting previously unselected package r-cran-littler.
179s Preparing to unpack .../202-r-cran-littler_0.3.22-1_amd64.deb ...
179s Unpacking r-cran-littler (0.3.22-1) ...
179s Selecting previously unselected package r-cran-pkgkitten.
179s Preparing to unpack .../203-r-cran-pkgkitten_0.2.4-1_all.deb ...
179s Unpacking r-cran-pkgkitten (0.2.4-1) ...
179s Selecting previously unselected package r-cran-rcpp.
179s Preparing to unpack .../204-r-cran-rcpp_1.1.0-1_amd64.deb ...
179s Unpacking r-cran-rcpp (1.1.0-1) ...
179s Selecting previously unselected package r-bioc-genomicranges.
179s Preparing to unpack .../205-r-bioc-genomicranges_1.58.0+dfsg-2_amd64.deb ...
179s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ...
180s Selecting previously unselected package r-cran-xml.
180s Preparing to unpack .../206-r-cran-xml_3.99-0.20-1_amd64.deb ...
180s Unpacking r-cran-xml (3.99-0.20-1) ...
180s Selecting previously unselected package r-cran-bitops.
180s Preparing to unpack .../207-r-cran-bitops_1.0-9-1_amd64.deb ...
180s Unpacking r-cran-bitops (1.0-9-1) ...
180s Selecting previously unselected package r-bioc-rhtslib.
180s Preparing to unpack .../208-r-bioc-rhtslib_3.2.0+dfsg-2_amd64.deb ...
180s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ...
180s Selecting previously unselected package r-bioc-rsamtools.
180s Preparing to unpack .../209-r-bioc-rsamtools_2.22.0+dfsg-2_amd64.deb ...
180s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ...
180s Selecting previously unselected package r-cran-matrixstats.
180s Preparing to unpack .../210-r-cran-matrixstats_1.5.0-1_amd64.deb ...
180s Unpacking r-cran-matrixstats (1.5.0-1) ...
180s Selecting previously unselected package r-bioc-matrixgenerics.
180s Preparing to unpack .../211-r-bioc-matrixgenerics_1.18.1-1_all.deb ...
180s Unpacking r-bioc-matrixgenerics (1.18.1-1) ...
180s Selecting previously unselected package r-cran-lattice.
180s Preparing to unpack .../212-r-cran-lattice_0.22-7-1_amd64.deb ...
180s Unpacking r-cran-lattice (0.22-7-1) ...
180s Selecting previously unselected package r-cran-matrix.
180s Preparing to unpack .../213-r-cran-matrix_1.7-4-1_amd64.deb ...
180s Unpacking r-cran-matrix (1.7-4-1) ...
180s Selecting previously unselected package r-cran-abind.
180s Preparing to unpack .../214-r-cran-abind_1.4-8-1build1_all.deb ...
180s Unpacking r-cran-abind (1.4-8-1build1) ...
180s Selecting previously unselected package r-bioc-s4arrays.
180s Preparing to unpack .../215-r-bioc-s4arrays_1.6.0+dfsg-2_amd64.deb ...
180s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ...
180s Selecting previously unselected package r-bioc-sparsearray.
180s Preparing to unpack .../216-r-bioc-sparsearray_1.6.2+dfsg-2_amd64.deb ...
180s Unpacking r-bioc-sparsearray (1.6.2+dfsg-2) ...
180s Selecting previously unselected package r-bioc-delayedarray.
180s Preparing to unpack .../217-r-bioc-delayedarray_0.32.0+dfsg-2_amd64.deb ...
180s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ...
180s Selecting previously unselected package r-bioc-summarizedexperiment.
180s Preparing to unpack .../218-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ...
180s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ...
180s Selecting previously unselected package r-bioc-genomicalignments.
180s Preparing to unpack .../219-r-bioc-genomicalignments_1.42.0-2_amd64.deb ...
180s Unpacking r-bioc-genomicalignments (1.42.0-2) ...
180s Selecting previously unselected package r-cran-rcurl.
180s Preparing to unpack .../220-r-cran-rcurl_1.98-1.16+dfsg-1_amd64.deb ...
180s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ...
180s Selecting previously unselected package r-cran-rjson.
180s Preparing to unpack .../221-r-cran-rjson_0.2.23-1_amd64.deb ...
180s Unpacking r-cran-rjson (0.2.23-1) ...
180s Selecting previously unselected package r-cran-yaml.
180s Preparing to unpack .../222-r-cran-yaml_2.3.10-1_amd64.deb ...
180s Unpacking r-cran-yaml (2.3.10-1) ...
180s Selecting previously unselected package r-cran-restfulr.
180s Preparing to unpack .../223-r-cran-restfulr_0.0.15-1_amd64.deb ...
180s Unpacking r-cran-restfulr (0.0.15-1) ...
180s Selecting previously unselected package r-bioc-rtracklayer.
180s Preparing to unpack .../224-r-bioc-rtracklayer_1.66.0-3_amd64.deb ...
180s Unpacking r-bioc-rtracklayer (1.66.0-3) ...
180s Selecting previously unselected package r-bioc-genomicfeatures.
180s Preparing to unpack .../225-r-bioc-genomicfeatures_1.58.0+dfsg-2_all.deb ...
180s Unpacking r-bioc-genomicfeatures (1.58.0+dfsg-2) ...
180s Selecting previously unselected package r-bioc-txdbmaker.
180s Preparing to unpack .../226-r-bioc-txdbmaker_1.2.1+ds-2_all.deb ...
180s Unpacking r-bioc-txdbmaker (1.2.1+ds-2) ...
180s Selecting previously unselected package r-cran-iterators.
180s Preparing to unpack .../227-r-cran-iterators_1.0.14-1build1_all.deb ...
180s Unpacking r-cran-iterators (1.0.14-1build1) ...
180s Selecting previously unselected package r-cran-foreach.
180s Preparing to unpack .../228-r-cran-foreach_1.5.2-1build1_all.deb ...
180s Unpacking r-cran-foreach (1.5.2-1build1) ...
180s Selecting previously unselected package r-cran-doparallel.
180s Preparing to unpack .../229-r-cran-doparallel_1.0.17-1build1_all.deb ...
180s Unpacking r-cran-doparallel (1.0.17-1build1) ...
180s Selecting previously unselected package r-cran-gtable.
180s Preparing to unpack .../230-r-cran-gtable_0.3.6+dfsg-1_all.deb ...
180s Unpacking r-cran-gtable (0.3.6+dfsg-1) ...
180s Selecting previously unselected package r-cran-isoband.
180s Preparing to unpack .../231-r-cran-isoband_0.2.7-1_amd64.deb ...
180s Unpacking r-cran-isoband (0.2.7-1) ...
180s Selecting previously unselected package r-cran-s7.
180s Preparing to unpack .../232-r-cran-s7_0.2.0-1_amd64.deb ...
180s Unpacking r-cran-s7 (0.2.0-1) ...
180s Selecting previously unselected package r-cran-farver.
180s Preparing to unpack .../233-r-cran-farver_2.1.2-1_amd64.deb ...
180s Unpacking r-cran-farver (2.1.2-1) ...
180s Selecting previously unselected package r-cran-labeling.
180s Preparing to unpack .../234-r-cran-labeling_0.4.3-1_all.deb ...
180s Unpacking r-cran-labeling (0.4.3-1) ...
180s Selecting previously unselected package r-cran-rcolorbrewer.
180s Preparing to unpack .../235-r-cran-rcolorbrewer_1.1-3-1build2_all.deb ...
180s Unpacking r-cran-rcolorbrewer (1.1-3-1build2) ...
180s Selecting previously unselected package r-cran-viridislite.
180s Preparing to unpack .../236-r-cran-viridislite_0.4.3-1_all.deb ...
180s Unpacking r-cran-viridislite (0.4.3-1) ...
180s Selecting previously unselected package r-cran-scales.
180s Preparing to unpack .../237-r-cran-scales_1.4.0-1_all.deb ...
180s Unpacking r-cran-scales (1.4.0-1) ...
180s Selecting previously unselected package r-cran-ggplot2.
180s Preparing to unpack .../238-r-cran-ggplot2_4.0.2+dfsg-1_all.deb ...
180s Unpacking r-cran-ggplot2 (4.0.2+dfsg-1) ...
180s Selecting previously unselected package r-cran-base64enc.
180s Preparing to unpack .../239-r-cran-base64enc_0.1-3-3build1_amd64.deb ...
180s Unpacking r-cran-base64enc (0.1-3-3build1) ...
180s Selecting previously unselected package r-cran-htmltools.
180s Preparing to unpack .../240-r-cran-htmltools_0.5.8.1-1_amd64.deb ...
180s Unpacking r-cran-htmltools (0.5.8.1-1) ...
180s Selecting previously unselected package r-cran-evaluate.
180s Preparing to unpack .../241-r-cran-evaluate_1.0.5-1_all.deb ...
180s Unpacking r-cran-evaluate (1.0.5-1) ...
180s Selecting previously unselected package r-cran-xfun.
180s Preparing to unpack .../242-r-cran-xfun_0.55+dfsg-1_amd64.deb ...
180s Unpacking r-cran-xfun (0.55+dfsg-1) ...
181s Selecting previously unselected package r-cran-highr.
181s Preparing to unpack .../243-r-cran-highr_0.11+dfsg-1_all.deb ...
181s Unpacking r-cran-highr (0.11+dfsg-1) ...
181s Selecting previously unselected package libjs-mathjax.
181s Preparing to unpack .../244-libjs-mathjax_2.7.9+dfsg-1build1_all.deb ...
181s Unpacking libjs-mathjax (2.7.9+dfsg-1build1) ...
181s Selecting previously unselected package r-cran-knitr.
181s Preparing to unpack .../245-r-cran-knitr_1.51+dfsg-1_all.deb ...
181s Unpacking r-cran-knitr (1.51+dfsg-1) ...
181s Selecting previously unselected package r-cran-jquerylib.
181s Preparing to unpack .../246-r-cran-jquerylib_0.1.4+dfsg-5_all.deb ...
181s Unpacking r-cran-jquerylib (0.1.4+dfsg-5) ...
181s Selecting previously unselected package r-cran-fs.
181s Preparing to unpack .../247-r-cran-fs_1.6.5+dfsg-1_amd64.deb ...
181s Unpacking r-cran-fs (1.6.5+dfsg-1) ...
181s Selecting previously unselected package r-cran-sass.
181s Preparing to unpack .../248-r-cran-sass_0.4.9+dfsg-1_amd64.deb ...
181s Unpacking r-cran-sass (0.4.9+dfsg-1) ...
181s Selecting previously unselected package r-cran-bslib.
181s Preparing to unpack .../249-r-cran-bslib_0.9.0+dfsg-3build1_all.deb ...
181s Unpacking r-cran-bslib (0.9.0+dfsg-3build1) ...
181s Selecting previously unselected package r-cran-fontawesome.
181s Preparing to unpack .../250-r-cran-fontawesome_0.5.3-1_all.deb ...
181s Unpacking r-cran-fontawesome (0.5.3-1) ...
181s Selecting previously unselected package r-cran-tinytex.
181s Preparing to unpack .../251-r-cran-tinytex_0.58-1_all.deb ...
181s Unpacking r-cran-tinytex (0.58-1) ...
181s Selecting previously unselected package libjs-modernizr.
181s Preparing to unpack .../252-libjs-modernizr_3.13.0-0.1build1_all.deb ...
181s Unpacking libjs-modernizr (3.13.0-0.1build1) ...
181s Selecting previously unselected package r-cran-later.
181s Preparing to unpack .../253-r-cran-later_1.4.1+dfsg-1_amd64.deb ...
181s Unpacking r-cran-later (1.4.1+dfsg-1) ...
181s Selecting previously unselected package r-cran-promises.
181s Preparing to unpack .../254-r-cran-promises_1.3.2+dfsg-1_amd64.deb ...
181s Unpacking r-cran-promises (1.3.2+dfsg-1) ...
181s Selecting previously unselected package r-cran-httpuv.
181s Preparing to unpack .../255-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ...
181s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ...
181s Selecting previously unselected package r-cran-xtable.
181s Preparing to unpack .../256-r-cran-xtable_1%3a1.8-4-2build1_all.deb ...
181s Unpacking r-cran-xtable (1:1.8-4-2build1) ...
181s Selecting previously unselected package r-cran-sourcetools.
181s Preparing to unpack .../257-r-cran-sourcetools_0.1.7-1-1_amd64.deb ...
181s Unpacking r-cran-sourcetools (0.1.7-1-1) ...
181s Selecting previously unselected package r-cran-commonmark.
181s Preparing to unpack .../258-r-cran-commonmark_1.9.5-1_amd64.deb ...
181s Unpacking r-cran-commonmark (1.9.5-1) ...
181s Selecting previously unselected package libjs-twitter-bootstrap-datepicker.
181s Preparing to unpack .../259-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ...
181s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ...
181s Selecting previously unselected package r-cran-shiny.
181s Preparing to unpack .../260-r-cran-shiny_1.10.0+dfsg-2_all.deb ...
181s Unpacking r-cran-shiny (1.10.0+dfsg-2) ...
181s Selecting previously unselected package r-cran-rmarkdown.
181s Preparing to unpack .../261-r-cran-rmarkdown_2.30+dfsg-1_all.deb ...
181s Unpacking r-cran-rmarkdown (2.30+dfsg-1) ...
181s Selecting previously unselected package r-cran-htmlwidgets.
181s Preparing to unpack .../262-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ...
181s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ...
181s Selecting previously unselected package r-cran-lazyeval.
181s Preparing to unpack .../263-r-cran-lazyeval_0.2.2-1build2_amd64.deb ...
181s Unpacking r-cran-lazyeval (0.2.2-1build2) ...
181s Selecting previously unselected package r-cran-crosstalk.
181s Preparing to unpack .../264-r-cran-crosstalk_1.2.2+dfsg-1_all.deb ...
181s Unpacking r-cran-crosstalk (1.2.2+dfsg-1) ...
181s Selecting previously unselected package r-cran-data.table.
181s Preparing to unpack .../265-r-cran-data.table_1.17.0+dfsg-1_amd64.deb ...
181s Unpacking r-cran-data.table (1.17.0+dfsg-1) ...
181s Selecting previously unselected package r-cran-miniui.
181s Preparing to unpack .../266-r-cran-miniui_0.1.2-1_all.deb ...
181s Unpacking r-cran-miniui (0.1.2-1) ...
181s Selecting previously unselected package r-cran-shinyjs.
181s Preparing to unpack .../267-r-cran-shinyjs_2.1.0-1build1_all.deb ...
181s Unpacking r-cran-shinyjs (2.1.0-1build1) ...
181s Selecting previously unselected package r-cran-colourpicker.
181s Preparing to unpack .../268-r-cran-colourpicker_1.3.0+dfsg-1_all.deb ...
181s Unpacking r-cran-colourpicker (1.3.0+dfsg-1) ...
181s Selecting previously unselected package r-cran-plotly.
181s Preparing to unpack .../269-r-cran-plotly_4.10.4+dfsg-4_all.deb ...
181s Unpacking r-cran-plotly (4.10.4+dfsg-4) ...
181s Selecting previously unselected package r-cran-gridextra.
181s Preparing to unpack .../270-r-cran-gridextra_2.3-3build2_all.deb ...
181s Unpacking r-cran-gridextra (2.3-3build2) ...
181s Selecting previously unselected package r-cran-viridis.
181s Preparing to unpack .../271-r-cran-viridis_0.6.5-1_all.deb ...
181s Unpacking r-cran-viridis (0.6.5-1) ...
181s Selecting previously unselected package r-cran-dendextend.
181s Preparing to unpack .../272-r-cran-dendextend_1.19.1+dfsg-1_all.deb ...
181s Unpacking r-cran-dendextend (1.19.1+dfsg-1) ...
182s Selecting previously unselected package r-cran-plyr.
182s Preparing to unpack .../273-r-cran-plyr_1.8.9-1_amd64.deb ...
182s Unpacking r-cran-plyr (1.8.9-1) ...
182s Selecting previously unselected package r-cran-reshape2.
182s Preparing to unpack .../274-r-cran-reshape2_1.4.4-2build2_amd64.deb ...
182s Unpacking r-cran-reshape2 (1.4.4-2build2) ...
182s Selecting previously unselected package r-cran-ca.
182s Preparing to unpack .../275-r-cran-ca_0.71.1-2build2_all.deb ...
182s Unpacking r-cran-ca (0.71.1-2build2) ...
182s Selecting previously unselected package r-cran-cluster.
182s Preparing to unpack .../276-r-cran-cluster_2.1.8.2-1_amd64.deb ...
182s Unpacking r-cran-cluster (2.1.8.2-1) ...
182s Selecting previously unselected package r-cran-colorspace.
182s Preparing to unpack .../277-r-cran-colorspace_2.1-1+dfsg-1_amd64.deb ...
182s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ...
182s Selecting previously unselected package r-cran-gclus.
182s Preparing to unpack .../278-r-cran-gclus_1.3.3-1_all.deb ...
182s Unpacking r-cran-gclus (1.3.3-1) ...
182s Selecting previously unselected package r-cran-mass.
182s Preparing to unpack .../279-r-cran-mass_7.3-65-1_amd64.deb ...
182s Unpacking r-cran-mass (7.3-65-1) ...
182s Selecting previously unselected package r-cran-qap.
182s Preparing to unpack .../280-r-cran-qap_0.1-2-1_amd64.deb ...
182s Unpacking r-cran-qap (0.1-2-1) ...
182s Selecting previously unselected package r-cran-registry.
182s Preparing to unpack .../281-r-cran-registry_0.5-1-2build2_all.deb ...
182s Unpacking r-cran-registry (0.5-1-2build2) ...
182s Selecting previously unselected package r-cran-tsp.
182s Preparing to unpack .../282-r-cran-tsp_1.2-4-1_amd64.deb ...
182s Unpacking r-cran-tsp (1.2-4-1) ...
182s Selecting previously unselected package r-cran-permute.
182s Preparing to unpack .../283-r-cran-permute_0.9-8-1_all.deb ...
182s Unpacking r-cran-permute (0.9-8-1) ...
182s Selecting previously unselected package r-cran-nlme.
182s Preparing to unpack .../284-r-cran-nlme_3.1.168-1_amd64.deb ...
182s Unpacking r-cran-nlme (3.1.168-1) ...
182s Selecting previously unselected package r-cran-mgcv.
182s Preparing to unpack .../285-r-cran-mgcv_1.9-4-1_amd64.deb ...
182s Unpacking r-cran-mgcv (1.9-4-1) ...
182s Selecting previously unselected package r-cran-vegan.
182s Preparing to unpack .../286-r-cran-vegan_2.6-10+dfsg-3_amd64.deb ...
182s Unpacking r-cran-vegan (2.6-10+dfsg-3) ...
182s Selecting previously unselected package r-cran-seriation.
182s Preparing to unpack .../287-r-cran-seriation_1.5.7-1_amd64.deb ...
182s Unpacking r-cran-seriation (1.5.7-1) ...
182s Selecting previously unselected package r-cran-ps.
182s Preparing to unpack .../288-r-cran-ps_1.9.0-1_amd64.deb ...
182s Unpacking r-cran-ps (1.9.0-1) ...
182s Selecting previously unselected package r-cran-processx.
182s Preparing to unpack .../289-r-cran-processx_3.8.6-1_amd64.deb ...
182s Unpacking r-cran-processx (3.8.6-1) ...
182s Selecting previously unselected package r-cran-callr.
182s Preparing to unpack .../290-r-cran-callr_3.7.6-1_all.deb ...
182s Unpacking r-cran-callr (3.7.6-1) ...
182s Selecting previously unselected package r-cran-webshot.
182s Preparing to unpack .../291-r-cran-webshot_0.5.5-1_all.deb ...
182s Unpacking r-cran-webshot (0.5.5-1) ...
182s Selecting previously unselected package r-cran-assertthat.
182s Preparing to unpack .../292-r-cran-assertthat_0.2.1-3_all.deb ...
182s Unpacking r-cran-assertthat (0.2.1-3) ...
182s Selecting previously unselected package r-cran-egg.
182s Preparing to unpack .../293-r-cran-egg_0.4.5-3build2_all.deb ...
182s Unpacking r-cran-egg (0.4.5-3build2) ...
182s Selecting previously unselected package r-cran-heatmaply.
182s Preparing to unpack .../294-r-cran-heatmaply_1.6.0+dfsg-1_all.deb ...
182s Unpacking r-cran-heatmaply (1.6.0+dfsg-1) ...
182s Selecting previously unselected package r-cran-rcpparmadillo.
182s Preparing to unpack .../295-r-cran-rcpparmadillo_15.2.3-1-1_amd64.deb ...
182s Unpacking r-cran-rcpparmadillo (15.2.3-1-1) ...
182s Selecting previously unselected package r-bioc-degnorm.
182s Preparing to unpack .../296-r-bioc-degnorm_1.16.0+ds-2_amd64.deb ...
182s Unpacking r-bioc-degnorm (1.16.0+ds-2) ...
182s Setting up libjs-json (0~20221030+~1.0.8-1build1) ...
182s Setting up javascript-common (12+nmu1build1) ...
182s Setting up libgraphite2-3:amd64 (1.3.14-11ubuntu1) ...
182s Setting up libpixman-1-0:amd64 (0.46.4-1) ...
182s Setting up libsharpyuv0:amd64 (1.5.0-0.1build1) ...
182s Setting up fonts-mathjax (2.7.9+dfsg-1build1) ...
182s Setting up liblerc4:amd64 (4.0.0+ds-5ubuntu2) ...
182s Setting up libzstd-dev:amd64 (1.5.7+dfsg-3) ...
182s Setting up libjs-mathjax (2.7.9+dfsg-1build1) ...
182s Setting up libxrender1:amd64 (1:0.9.12-1) ...
182s Setting up libdatrie1:amd64 (0.2.14-1) ...
182s Setting up libjs-popper.js (1.16.1+ds-6build1) ...
182s Setting up libxcb-render0:amd64 (1.17.0-2ubuntu1) ...
182s Setting up libjs-sifter.js (0.6.0+dfsg-3) ...
182s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ...
182s Setting up unzip (6.0-29ubuntu1) ...
182s Setting up x11-common (1:7.7+24ubuntu1) ...
182s Setting up node-html5shiv (3.7.3+dfsg-5) ...
182s Setting up libdeflate0:amd64 (1.23-2build1) ...
182s Setting up linux-libc-dev:amd64 (6.19.0-3.3) ...
182s Setting up libjs-microplugin.js (0.0.3+dfsg-2) ...
182s Setting up libxcb-shm0:amd64 (1.17.0-2ubuntu1) ...
182s Setting up libgomp1:amd64 (16-20260208-1ubuntu1) ...
182s Setting up libjs-modernizr (3.13.0-0.1build1) ...
182s Setting up libjbig0:amd64 (2.1-6.1ubuntu3) ...
182s Setting up libpcre2-16-0:amd64 (10.46-1) ...
182s Setting up libjs-es5-shim (4.6.7-2) ...
182s Setting up zip (3.0-15ubuntu3) ...
182s Setting up libpcre2-32-0:amd64 (10.46-1) ...
182s Setting up libblas3:amd64 (3.12.1-7ubuntu1) ...
182s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
182s Setting up libtirpc-dev:amd64 (1.3.6+ds-1) ...
182s Setting up libpkgconf3:amd64 (1.8.1-4build1) ...
182s Setting up rpcsvc-proto (1.4.3-1build1) ...
182s Setting up libquadmath0:amd64 (16-20260208-1ubuntu1) ...
182s Setting up libjs-d3 (3.5.17-4build1) ...
182s Setting up fonts-dejavu-mono (2.37-8build1) ...
182s Setting up libmpc3:amd64 (1.3.1-2) ...
182s Setting up libtcl8.6:amd64 (8.6.17+dfsg-1build1) ...
182s Setting up icu-devtools (78.2-1ubuntu1) ...
182s Setting up fonts-dejavu-core (2.37-8build1) ...
182s Setting up pkgconf-bin (1.8.1-4build1) ...
182s Setting up libjpeg-turbo8:amd64 (2.1.5-4ubuntu3) ...
182s Setting up libgfortran5:amd64 (16-20260208-1ubuntu1) ...
182s Setting up libwebp7:amd64 (1.5.0-0.1build1) ...
182s Setting up liblzma-dev:amd64 (5.8.2-2) ...
182s Setting up libubsan1:amd64 (16-20260208-1ubuntu1) ...
182s Setting up libpcre2-posix3:amd64 (10.46-1) ...
182s Setting up libjs-highlight.js (10.7.3+dfsg-2) ...
182s Setting up libhwasan0:amd64 (16-20260208-1ubuntu1) ...
182s Setting up libcrypt-dev:amd64 (1:4.5.1-1) ...
182s Setting up libasan8:amd64 (16-20260208-1ubuntu1) ...
182s Setting up liblua5.4-0:amd64 (5.4.8-1) ...
182s Setting up libharfbuzz0b:amd64 (12.3.2-1) ...
182s Setting up libthai-data (0.1.30-1) ...
182s Setting up node-bootstrap-sass (3.4.3-2) ...
182s Setting up libjs-prettify (2015.12.04+dfsg-3) ...
182s Setting up libxss1:amd64 (1:1.2.3-1build4) ...
182s Setting up libjs-bootstrap4 (4.6.2+dfsg-1) ...
182s Setting up libpaper2:amd64 (2.2.5-0.3build1) ...
183s Setting up pandoc-data (3.1.11.1-3build1) ...
183s Setting up libtsan2:amd64 (16-20260208-1ubuntu1) ...
183s Setting up libjs-jquery (3.7.1+dfsg+~3.5.33-1build1) ...
183s Setting up libisl23:amd64 (0.27-1build1) ...
183s Setting up libc-dev-bin (2.42-2ubuntu4) ...
183s Setting up libdeflate-dev:amd64 (1.23-2build1) ...
183s Setting up node-normalize.css (8.0.1-5.1) ...
183s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1build1) ...
183s Setting up xdg-utils (1.2.1-2ubuntu2) ...
183s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
183s Setting up libcc1-0:amd64 (16-20260208-1ubuntu1) ...
183s Setting up liblsan0:amd64 (16-20260208-1ubuntu1) ...
183s Setting up libblas-dev:amd64 (3.12.1-7ubuntu1) ...
183s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode
183s Setting up dctrl-tools (2.24-3build4) ...
183s Setting up libjs-bootstrap (3.4.1+dfsg-6) ...
183s Setting up libitm1:amd64 (16-20260208-1ubuntu1) ...
183s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ...
183s Setting up libjpeg8:amd64 (8c-2ubuntu12) ...
183s Setting up libice6:amd64 (2:1.1.1-1build1) ...
183s Setting up liblapack3:amd64 (3.12.1-7ubuntu1) ...
183s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
183s Setting up libgcc-15-dev:amd64 (15.2.0-12ubuntu1) ...
183s Setting up fontconfig-config (2.17.1-3ubuntu1) ...
183s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ...
183s Setting up libpaper-utils (2.2.5-0.3build1) ...
183s Setting up cpp-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
183s Setting up libgfortran-15-dev:amd64 (15.2.0-12ubuntu1) ...
183s Setting up libjs-jquery-datatables (1.11.5+dfsg-2build1) ...
183s Setting up pkgconf:amd64 (1.8.1-4build1) ...
183s Setting up gcc-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
183s Setting up libthai0:amd64 (0.1.30-1) ...
183s Setting up libjs-jquery-ui (1.13.2+dfsg-1build1) ...
183s Setting up pandoc (3.1.11.1+ds-4) ...
183s Setting up liblapack-dev:amd64 (3.12.1-7ubuntu1) ...
183s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode
183s Setting up cpp-15 (15.2.0-12ubuntu1) ...
183s Setting up libtiff6:amd64 (4.7.0-3ubuntu3) ...
183s Setting up libc6-dev:amd64 (2.42-2ubuntu4) ...
183s Setting up libfontconfig1:amd64 (2.17.1-3ubuntu1) ...
183s Setting up libsm6:amd64 (2:1.2.6-1build1) ...
183s Setting up libicu-dev:amd64 (78.2-1ubuntu1) ...
183s Setting up libbz2-dev:amd64 (1.0.8-6build2) ...
183s Setting up cpp-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
183s Setting up gfortran-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
183s Setting up fontconfig (2.17.1-3ubuntu1) ...
185s Regenerating fonts cache... done.
185s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-4ubuntu3) ...
185s Setting up libxft2:amd64 (2.3.6-1build2) ...
185s Setting up libncurses-dev:amd64 (6.6+20251231-1) ...
185s Setting up libpcre2-dev:amd64 (10.46-1) ...
185s Setting up gcc-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
185s Setting up libtk8.6:amd64 (8.6.17-1) ...
185s Setting up libpango-1.0-0:amd64 (1.57.0-1) ...
185s Setting up libreadline-dev:amd64 (8.3-3) ...
185s Setting up gfortran-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
185s Setting up libcairo2:amd64 (1.18.4-3) ...
185s Setting up gcc-15 (15.2.0-12ubuntu1) ...
185s Setting up libstdc++-15-dev:amd64 (15.2.0-12ubuntu1) ...
185s Setting up libxt6t64:amd64 (1:1.2.1-1.3) ...
185s Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ...
185s Setting up cpp (4:15.2.0-4ubuntu1) ...
185s Setting up libboost1.90-dev:amd64 (1.90.0-2ubuntu1) ...
185s Setting up libboost-dev:amd64 (1.90.0.0ubuntu3) ...
185s Setting up libpangoft2-1.0-0:amd64 (1.57.0-1) ...
185s Setting up libjpeg8-dev:amd64 (8c-2ubuntu12) ...
185s Setting up gfortran-15 (15.2.0-12ubuntu1) ...
185s Setting up libpangocairo-1.0-0:amd64 (1.57.0-1) ...
185s Setting up g++-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ...
185s Setting up libpng-dev:amd64 (1.6.54-1) ...
185s Setting up libjpeg-dev:amd64 (8c-2ubuntu12) ...
185s Setting up gcc (4:15.2.0-4ubuntu1) ...
185s Setting up r-base-core (4.5.2-1ubuntu2) ...
185s Creating config file /etc/R/Renviron with new version
185s Setting up r-cran-crayon (1.5.3-1) ...
185s Setting up r-cran-labeling (0.4.3-1) ...
185s Setting up r-cran-sourcetools (0.1.7-1-1) ...
185s Setting up r-cran-futile.options (1.0.1-3build2) ...
185s Setting up r-cran-lattice (0.22-7-1) ...
185s Setting up r-cran-ps (1.9.0-1) ...
185s Setting up r-cran-nlme (3.1.168-1) ...
185s Setting up r-cran-farver (2.1.2-1) ...
185s Setting up r-cran-formatr (1.14-2) ...
185s Setting up r-cran-xml (3.99-0.20-1) ...
185s Setting up r-cran-viridislite (0.4.3-1) ...
185s Setting up r-cran-cluster (2.1.8.2-1) ...
185s Setting up g++-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ...
185s Setting up r-cran-lazyeval (0.2.2-1build2) ...
185s Setting up r-cran-commonmark (1.9.5-1) ...
185s Setting up r-cran-rjson (0.2.23-1) ...
185s Setting up r-cran-r6 (2.6.1-1) ...
185s Setting up r-cran-pkgkitten (0.2.4-1) ...
185s Setting up r-cran-ca (0.71.1-2build2) ...
185s Setting up g++-15 (15.2.0-12ubuntu1) ...
185s Setting up r-cran-magrittr (2.0.3-1) ...
185s Setting up r-cran-rappdirs (0.3.3-1build1) ...
185s Setting up r-cran-filelock (1.0.3-1) ...
185s Setting up r-bioc-genomeinfodbdata (1.2.13-2) ...
185s Setting up r-cran-registry (0.5-1-2build2) ...
185s Setting up r-cran-littler (0.3.22-1) ...
185s Setting up r-cran-permute (0.9-8-1) ...
185s Setting up r-cran-bh (1.84.0-1) ...
185s Setting up r-cran-fs (1.6.5+dfsg-1) ...
185s Setting up r-cran-rcpp (1.1.0-1) ...
185s Setting up r-cran-curl (7.0.0+dfsg-1) ...
185s Setting up r-cran-codetools (0.2-20-1build1) ...
185s Setting up r-bioc-biocgenerics (0.52.0-2) ...
185s Setting up r-cran-rlang (1.1.5-3) ...
185s Setting up r-cran-matrixstats (1.5.0-1) ...
185s Setting up r-cran-assertthat (0.2.1-3) ...
185s Setting up r-bioc-matrixgenerics (1.18.1-1) ...
185s Setting up r-cran-xfun (0.55+dfsg-1) ...
185s Setting up r-cran-sys (3.4.3-1) ...
185s Setting up r-cran-gclus (1.3.3-1) ...
185s Setting up r-cran-plogr (0.2.0-3build2) ...
185s Setting up r-cran-withr (3.0.2+dfsg-1) ...
185s Setting up r-cran-processx (3.8.6-1) ...
185s Setting up r-cran-mime (0.12-2) ...
185s Setting up r-cran-qap (0.1-2-1) ...
185s Setting up r-cran-generics (0.1.4-1) ...
185s Setting up r-cran-base64enc (0.1-3-3build1) ...
185s Setting up r-cran-iterators (1.0.14-1build1) ...
185s Setting up r-cran-abind (1.4-8-1build1) ...
185s Setting up r-cran-digest (0.6.39-1) ...
185s Setting up r-cran-yaml (2.3.10-1) ...
185s Setting up r-cran-lambda.r (1.2.4-2build2) ...
185s Setting up r-cran-evaluate (1.0.5-1) ...
185s Setting up r-cran-dbi (1.2.3-1build1) ...
185s Setting up r-cran-highr (0.11+dfsg-1) ...
185s Setting up r-cran-foreach (1.5.2-1build1) ...
185s Setting up r-cran-prettyunits (1.2.0-1) ...
185s Setting up r-cran-fansi (1.0.6-2) ...
185s Setting up r-cran-mass (7.3-65-1) ...
185s Setting up r-cran-snow (1:0.4.4-2build1) ...
185s Setting up r-cran-data.table (1.17.0+dfsg-1) ...
185s Setting up r-cran-glue (1.8.0-1) ...
185s Setting up r-cran-bit (4.6.0+dfsg-1) ...
185s Setting up r-cran-xtable (1:1.8-4-2build1) ...
185s Setting up r-cran-cli (3.6.4-1) ...
185s Setting up gfortran (4:15.2.0-4ubuntu1) ...
185s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
185s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
185s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
185s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
185s Setting up r-cran-lifecycle (1.0.5+dfsg-1) ...
185s Setting up r-cran-bitops (1.0-9-1) ...
185s Setting up r-cran-bit64 (4.6.0-1-4) ...
185s Setting up r-bioc-zlibbioc (1.52.0+dfsg-2) ...
185s Setting up r-cran-askpass (1.2.1-1) ...
185s Setting up r-cran-fastmap (1.2.0-1) ...
185s Setting up r-cran-png (0.1-8-1build2) ...
185s Setting up r-bioc-biobase (2.66.0-2) ...
185s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ...
185s Setting up r-cran-pkgconfig (2.0.3-2build2) ...
185s Setting up r-cran-utf8 (1.2.4-1) ...
185s Setting up r-cran-colorspace (2.1-1+dfsg-1) ...
185s Setting up r-cran-stringi (1.8.4-1build2) ...
185s Setting up r-cran-s7 (0.2.0-1) ...
185s Setting up r-cran-cpp11 (0.5.3-1) ...
185s Setting up r-cran-plyr (1.8.9-1) ...
185s Setting up r-cran-rcolorbrewer (1.1-3-1build2) ...
185s Setting up r-bioc-s4vectors (0.44.0+dfsg-2) ...
185s Setting up r-cran-isoband (0.2.7-1) ...
185s Setting up r-cran-futile.logger (1.4.3-4build2) ...
185s Setting up r-cran-scales (1.4.0-1) ...
185s Setting up r-cran-gtable (0.3.6+dfsg-1) ...
185s Setting up r-cran-later (1.4.1+dfsg-1) ...
185s Setting up r-cran-matrix (1.7-4-1) ...
185s Setting up r-cran-doparallel (1.0.17-1build1) ...
185s Setting up r-cran-htmltools (0.5.8.1-1) ...
185s Setting up r-cran-tinytex (0.58-1) ...
185s Setting up r-cran-knitr (1.51+dfsg-1) ...
185s Setting up r-cran-mgcv (1.9-4-1) ...
185s Setting up g++ (4:15.2.0-4ubuntu1) ...
185s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
185s Setting up r-cran-cachem (1.1.0-1) ...
185s Setting up r-cran-sass (0.4.9+dfsg-1) ...
185s Setting up build-essential (12.12ubuntu2) ...
185s Setting up r-cran-rcpparmadillo (15.2.3-1-1) ...
185s Setting up r-bioc-iranges (2.40.1-3) ...
185s Setting up r-cran-tsp (1.2-4-1) ...
185s Setting up r-cran-rcurl (1.98-1.16+dfsg-1) ...
185s Setting up r-cran-restfulr (0.0.15-1) ...
185s Setting up r-cran-vctrs (0.6.5-1) ...
185s Setting up r-cran-pillar (1.11.1+dfsg-1) ...
185s Setting up r-cran-openssl (2.3.2+dfsg-1) ...
185s Setting up r-base-dev (4.5.2-1ubuntu2) ...
185s Setting up r-bioc-s4arrays (1.6.0+dfsg-2) ...
185s Setting up r-cran-stringr (1.5.1-1) ...
185s Setting up r-bioc-biocparallel (1.40.0-2) ...
185s Setting up r-cran-callr (3.7.6-1) ...
185s Setting up r-cran-ggplot2 (4.0.2+dfsg-1) ...
185s Setting up r-bioc-rhtslib (3.2.0+dfsg-2) ...
185s Setting up r-cran-xml2 (1.4.1-1) ...
185s Setting up r-cran-tibble (3.2.1+dfsg-3) ...
185s Setting up r-cran-fontawesome (0.5.3-1) ...
185s Setting up r-bioc-biocio (1.16.0+dfsg-2) ...
185s Setting up r-cran-jquerylib (0.1.4+dfsg-5) ...
185s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ...
185s Setting up r-cran-reshape2 (1.4.4-2build2) ...
185s Setting up r-cran-httr2 (1.1.1-2) ...
185s Setting up r-cran-httr (1.4.7+dfsg-1) ...
185s Setting up r-cran-gridextra (2.3-3build2) ...
185s Setting up r-cran-hms (1.1.4-1) ...
185s Setting up r-cran-memoise (2.0.1-1build1) ...
185s Setting up r-cran-promises (1.3.2+dfsg-1) ...
185s Setting up r-cran-purrr (1.0.4-1) ...
185s Setting up r-cran-vegan (2.6-10+dfsg-3) ...
185s Setting up r-cran-blob (1.3.0-1) ...
185s Setting up pkg-r-autopkgtest (20250812) ...
185s Setting up r-bioc-xvector (0.46.0-2) ...
185s Setting up r-cran-seriation (1.5.7-1) ...
185s Setting up r-cran-dplyr (1.1.4-4) ...
185s Setting up r-cran-rsqlite (2.3.9-1) ...
185s Setting up r-cran-progress (1.2.3-1) ...
185s Setting up r-cran-webshot (0.5.5-1) ...
185s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ...
185s Setting up r-bioc-sparsearray (1.6.2+dfsg-2) ...
185s Setting up r-cran-egg (0.4.5-3build2) ...
185s Setting up r-cran-httpuv (1.6.15+dfsg-1) ...
185s Setting up r-cran-viridis (0.6.5-1) ...
185s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ...
185s Setting up r-cran-bslib (0.9.0+dfsg-3build1) ...
185s Setting up r-cran-tidyr (1.3.1-1) ...
185s Setting up r-cran-dbplyr (2.5.1+dfsg-1) ...
185s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ...
185s Setting up r-cran-dendextend (1.19.1+dfsg-1) ...
185s Setting up r-bioc-biocfilecache (2.14.0+dfsg-2) ...
185s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ...
185s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ...
185s Setting up r-cran-shiny (1.10.0+dfsg-2) ...
185s Setting up r-cran-shinyjs (2.1.0-1build1) ...
185s Setting up r-cran-miniui (0.1.2-1) ...
185s Setting up r-cran-rmarkdown (2.30+dfsg-1) ...
185s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ...
185s Setting up r-cran-crosstalk (1.2.2+dfsg-1) ...
185s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ...
185s Setting up r-bioc-keggrest (1.46.0+dfsg-3) ...
185s Setting up r-bioc-annotationdbi (1.68.0-2) ...
185s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ...
185s Setting up r-cran-colourpicker (1.3.0+dfsg-1) ...
185s Setting up r-bioc-biomart (2.62.1+dfsg-1) ...
185s Setting up r-bioc-genomicalignments (1.42.0-2) ...
185s Setting up r-bioc-rtracklayer (1.66.0-3) ...
185s Setting up r-bioc-genomicfeatures (1.58.0+dfsg-2) ...
185s Setting up r-cran-plotly (4.10.4+dfsg-4) ...
185s Setting up r-cran-heatmaply (1.6.0+dfsg-1) ...
185s Setting up r-bioc-txdbmaker (1.2.1+ds-2) ...
185s Setting up r-bioc-degnorm (1.16.0+ds-2) ...
185s Processing triggers for man-db (2.13.1-1build1) ...
186s Processing triggers for install-info (7.2-5) ...
186s Processing triggers for libc-bin (2.42-2ubuntu4) ...
187s autopkgtest [04:10:00]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
187s autopkgtest [04:10:00]: test pkg-r-autopkgtest: [-----------------------
187s Test: Try to load the R library DegNorm
187s 
187s R version 4.5.2 (2025-10-31) -- "[Not] Part in a Rumble"
187s Copyright (C) 2025 The R Foundation for Statistical Computing
187s Platform: x86_64-pc-linux-gnu
187s 
187s R is free software and comes with ABSOLUTELY NO WARRANTY.
187s You are welcome to redistribute it under certain conditions.
187s Type 'license()' or 'licence()' for distribution details.
187s 
187s R is a collaborative project with many contributors.
187s Type 'contributors()' for more information and
187s 'citation()' on how to cite R or R packages in publications.
187s 
187s Type 'demo()' for some demos, 'help()' for on-line help, or
187s 'help.start()' for an HTML browser interface to help.
187s Type 'q()' to quit R.
187s 
187s > library('DegNorm')
195s > 
195s find: ‘tests’: No such file or directory
195s autopkgtest [04:10:08]: test pkg-r-autopkgtest: -----------------------]
196s autopkgtest [04:10:09]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
196s pkg-r-autopkgtest    PASS
196s autopkgtest [04:10:09]: @@@@@@@@@@@@@@@@@@@@ summary
196s pkg-r-autopkgtest    PASS