0s autopkgtest [16:39:50]: starting date and time: 2026-01-23 16:39:50+0000 0s autopkgtest [16:39:50]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [16:39:50]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.5etdsjax/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults --apt-upgrade python-nxtomomill --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python3-defaults/3.14.2-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-amd64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@sto01-12.secgroup --name adt-resolute-amd64-python-nxtomomill-20260123-163950-juju-7f2275-prod-proposed-migration-environment-20-a40302c0-cd54-4736-bd1d-51dd6f6fdb63 --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-autopkgtest-workers-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 4s Creating nova instance adt-resolute-amd64-python-nxtomomill-20260123-163950-juju-7f2275-prod-proposed-migration-environment-20-a40302c0-cd54-4736-bd1d-51dd6f6fdb63 from image adt/ubuntu-resolute-amd64-server-20260123.img (UUID 789dbc23-4f1b-4e7c-bcab-98e6eebf04f2)... 72s autopkgtest [16:41:02]: testbed dpkg architecture: amd64 72s autopkgtest [16:41:02]: testbed apt version: 3.1.13 73s autopkgtest [16:41:03]: @@@@@@@@@@@@@@@@@@@@ test bed setup 73s autopkgtest [16:41:03]: testbed release detected to be: None 73s autopkgtest [16:41:03]: updating testbed package index (apt update) 74s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 74s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 74s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 74s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 74s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1019 kB] 74s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [95.0 kB] 74s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [23.6 kB] 74s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [2820 B] 74s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [107 kB] 74s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [129 kB] 74s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [3656 B] 74s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 Packages [12.3 kB] 74s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/restricted i386 Packages [3696 B] 74s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [336 B] 74s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [913 kB] 74s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [401 kB] 74s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [23.5 kB] 74s Get:18 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [11.6 kB] 74s Get:19 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [4704 B] 74s Get:20 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [668 B] 75s Fetched 2876 kB in 1s (3248 kB/s) 76s Reading package lists... 76s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 76s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 76s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 76s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 77s Reading package lists... 77s Reading package lists... 77s Building dependency tree... 77s Reading state information... 77s Calculating upgrade... 77s The following packages were automatically installed and are no longer required: 77s python3.13 python3.13-minimal 77s Use 'sudo apt autoremove' to remove them. 77s The following NEW packages will be installed: 77s libpython3.14-minimal libpython3.14-stdlib python3.14 python3.14-minimal 77s The following packages will be upgraded: 77s libplymouth5 libpython3-stdlib libtasn1-6 plymouth 77s plymouth-theme-ubuntu-text python3 python3-gdbm python3-jaraco.context 77s python3-minimal 77s 9 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. 77s Need to get 7110 kB of archives. 77s After this operation, 24.5 MB of additional disk space will be used. 77s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-minimal amd64 3.14.2-1 [920 kB] 77s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.14-minimal amd64 3.14.2-1 [2563 kB] 77s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-minimal amd64 3.14.2-1 [28.2 kB] 77s Get:4 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3 amd64 3.14.2-1 [22.9 kB] 77s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-stdlib amd64 3.14.2-1 [2398 kB] 77s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.14 amd64 3.14.2-1 [816 kB] 77s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libpython3-stdlib amd64 3.14.2-1 [10.9 kB] 77s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 libtasn1-6 amd64 4.21.0-2 [45.3 kB] 77s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libplymouth5 amd64 24.004.60+git20250831.4a3c171d-0ubuntu5 [143 kB] 78s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 plymouth-theme-ubuntu-text amd64 24.004.60+git20250831.4a3c171d-0ubuntu5 [10.2 kB] 78s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 plymouth amd64 24.004.60+git20250831.4a3c171d-0ubuntu5 [135 kB] 78s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-gdbm amd64 3.14.2-1 [11.1 kB] 78s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-jaraco.context all 6.0.1-2 [8198 B] 78s dpkg-preconfigure: unable to re-open stdin: No such file or directory 78s Fetched 7110 kB in 0s (14.6 MB/s) 78s Selecting previously unselected package libpython3.14-minimal:amd64. 78s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 124176 files and directories currently installed.) 78s Preparing to unpack .../libpython3.14-minimal_3.14.2-1_amd64.deb ... 78s Unpacking libpython3.14-minimal:amd64 (3.14.2-1) ... 78s Selecting previously unselected package python3.14-minimal. 78s Preparing to unpack .../python3.14-minimal_3.14.2-1_amd64.deb ... 78s Unpacking python3.14-minimal (3.14.2-1) ... 78s Setting up libpython3.14-minimal:amd64 (3.14.2-1) ... 78s Setting up python3.14-minimal (3.14.2-1) ... 79s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 124518 files and directories currently installed.) 79s Preparing to unpack .../python3-minimal_3.14.2-1_amd64.deb ... 79s Unpacking python3-minimal (3.14.2-1) over (3.13.9-3) ... 79s Setting up python3-minimal (3.14.2-1) ... 79s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 124518 files and directories currently installed.) 79s Preparing to unpack .../0-python3_3.14.2-1_amd64.deb ... 79s running python pre-rtupdate hooks for python3.14... 79s Unpacking python3 (3.14.2-1) over (3.13.9-3) ... 79s Selecting previously unselected package libpython3.14-stdlib:amd64. 79s Preparing to unpack .../1-libpython3.14-stdlib_3.14.2-1_amd64.deb ... 79s Unpacking libpython3.14-stdlib:amd64 (3.14.2-1) ... 79s Selecting previously unselected package python3.14. 79s Preparing to unpack .../2-python3.14_3.14.2-1_amd64.deb ... 79s Unpacking python3.14 (3.14.2-1) ... 79s Preparing to unpack .../3-libpython3-stdlib_3.14.2-1_amd64.deb ... 79s Unpacking libpython3-stdlib:amd64 (3.14.2-1) over (3.13.9-3) ... 79s Preparing to unpack .../4-libtasn1-6_4.21.0-2_amd64.deb ... 79s Unpacking libtasn1-6:amd64 (4.21.0-2) over (4.20.0-2ubuntu1) ... 79s Preparing to unpack .../5-libplymouth5_24.004.60+git20250831.4a3c171d-0ubuntu5_amd64.deb ... 79s Unpacking libplymouth5:amd64 (24.004.60+git20250831.4a3c171d-0ubuntu5) over (24.004.60+git20250831.4a3c171d-0ubuntu4) ... 79s Preparing to unpack .../6-plymouth-theme-ubuntu-text_24.004.60+git20250831.4a3c171d-0ubuntu5_amd64.deb ... 79s Unpacking plymouth-theme-ubuntu-text (24.004.60+git20250831.4a3c171d-0ubuntu5) over (24.004.60+git20250831.4a3c171d-0ubuntu4) ... 79s Preparing to unpack .../7-plymouth_24.004.60+git20250831.4a3c171d-0ubuntu5_amd64.deb ... 79s Unpacking plymouth (24.004.60+git20250831.4a3c171d-0ubuntu5) over (24.004.60+git20250831.4a3c171d-0ubuntu4) ... 79s Preparing to unpack .../8-python3-gdbm_3.14.2-1_amd64.deb ... 79s Unpacking python3-gdbm (3.14.2-1) over (3.13.9-3) ... 79s Preparing to unpack .../9-python3-jaraco.context_6.0.1-2_all.deb ... 79s Unpacking python3-jaraco.context (6.0.1-2) over (6.0.1-1build1) ... 79s Setting up libpython3.14-stdlib:amd64 (3.14.2-1) ... 79s Setting up libplymouth5:amd64 (24.004.60+git20250831.4a3c171d-0ubuntu5) ... 79s Setting up libtasn1-6:amd64 (4.21.0-2) ... 79s Setting up python3.14 (3.14.2-1) ... 80s Setting up libpython3-stdlib:amd64 (3.14.2-1) ... 80s Setting up python3-gdbm (3.14.2-1) ... 80s Setting up plymouth (24.004.60+git20250831.4a3c171d-0ubuntu5) ... 80s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 80s update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults 80s Setting up python3 (3.14.2-1) ... 80s running python rtupdate hooks for python3.14... 80s running python post-rtupdate hooks for python3.14... 81s Setting up python3-jaraco.context (6.0.1-2) ... 81s Processing triggers for libc-bin (2.42-2ubuntu4) ... 81s Processing triggers for systemd (259-1ubuntu2) ... 81s Processing triggers for man-db (2.13.1-1) ... 81s Processing triggers for initramfs-tools (0.150ubuntu7) ... 81s update-initramfs: Generating /boot/initrd.img-6.18.0-9-generic 86s Setting up plymouth-theme-ubuntu-text (24.004.60+git20250831.4a3c171d-0ubuntu5) ... 86s Processing triggers for initramfs-tools (0.150ubuntu7) ... 86s update-initramfs: Generating /boot/initrd.img-6.18.0-9-generic 90s autopkgtest [16:41:20]: upgrading testbed (apt dist-upgrade and autopurge) 90s Reading package lists... 90s Building dependency tree... 90s Reading state information... 90s Calculating upgrade... 91s The following packages were automatically installed and are no longer required: 91s python3.13 python3.13-minimal 91s Use 'sudo apt autoremove' to remove them. 91s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 91s Reading package lists... 91s Building dependency tree... 91s Reading state information... 91s Solving dependencies... 91s The following packages will be REMOVED: 91s python3.13* python3.13-minimal* 91s 0 upgraded, 0 newly installed, 2 to remove and 0 not upgraded. 91s After this operation, 7860 kB disk space will be freed. 91s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 124945 files and directories currently installed.) 91s Removing python3.13 (3.13.11-1) ... 91s Removing python3.13-minimal (3.13.11-1) ... 92s Processing triggers for man-db (2.13.1-1) ... 92s Processing triggers for systemd (259-1ubuntu2) ... 92s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 124918 files and directories currently installed.) 92s Purging configuration files for python3.13-minimal (3.13.11-1) ... 92s autopkgtest [16:41:22]: rebooting testbed after setup commands that affected boot 162s autopkgtest [16:42:32]: testbed running kernel: Linux 6.18.0-9-generic #9-Ubuntu SMP PREEMPT_DYNAMIC Mon Jan 12 16:49:02 UTC 2026 164s autopkgtest [16:42:34]: @@@@@@@@@@@@@@@@@@@@ apt-source python-nxtomomill 165s Get:1 http://ftpmaster.internal/ubuntu resolute/universe python-nxtomomill 1.1.0-6 (dsc) [2003 B] 165s Get:2 http://ftpmaster.internal/ubuntu resolute/universe python-nxtomomill 1.1.0-6 (tar) [1121 kB] 165s Get:3 http://ftpmaster.internal/ubuntu resolute/universe python-nxtomomill 1.1.0-6 (diff) [3604 B] 165s gpgv: Signature made Wed Oct 8 13:51:19 2025 UTC 165s gpgv: using RSA key D54C3BFAFFB042DE382DA5D741CE7F0B9F1B8B32 165s gpgv: Can't check signature: No public key 165s dpkg-source: warning: cannot verify inline signature for ./python-nxtomomill_1.1.0-6.dsc: no acceptable signature found 165s autopkgtest [16:42:35]: testing package python-nxtomomill version 1.1.0-6 165s autopkgtest [16:42:35]: build not needed 166s autopkgtest [16:42:36]: test pybuild-autopkgtest: preparing testbed 166s Reading package lists... 166s Building dependency tree... 166s Reading state information... 166s Solving dependencies... 167s The following NEW packages will be installed: 167s autoconf automake autopoint autotools-dev bitshuffle build-essential 167s clang-18 cpp cpp-15 cpp-15-x86-64-linux-gnu cpp-x86-64-linux-gnu debhelper 167s debugedit dh-autoreconf dh-python dh-strip-nondeterminism dwz fontconfig 167s fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx g++ g++-15 167s g++-15-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-15 167s gcc-15-x86-64-linux-gnu gcc-x86-64-linux-gnu gdb gettext intltool-debian 167s libaec0 libamd-comgr3 libamdhip64-6 libarchive-zip-perl libasan8 167s libavahi-client3 libavahi-common-data libavahi-common3 libbabeltrace1 167s libblas3 libcc1-0 libclang-common-18-dev libclang-cpp18 libclang1-18 167s libcups2t64 libdebhelper-perl libdeflate0 libdouble-conversion3 167s libdrm-intel1 libegl-mesa0 libegl1 libevent-pthreads-2.1-7t64 libfabric1 167s libfile-stripnondeterminism-perl libfontconfig1 libgbm1 libgc1 libgcc-15-dev 167s libgfortran5 libgl1 libgl1-mesa-dri libgles2 libglu1-mesa libglut3.12 167s libglvnd0 libglx-mesa0 libglx0 libgomp1 libgraphite2-3 libharfbuzz0b 167s libhdf5-310 libhdf5-hl-310 libhdf5-openmpi-310 libhsa-runtime64-1 libhsakmt1 167s libhwasan0 libhwloc-plugins libhwloc15 libibmad5 libibumad3 libice6 167s libimagequant0 libinput-bin libinput10 libipt2 libisl23 libitm1 libjbig0 167s libjpeg-turbo8 libjpeg8 liblapack3 liblcms2-2 liblerc4 libllvm18 167s libllvmspirvlib18.1 liblsan0 liblzf1 libmd4c0 libmpc3 libmtdev1t64 167s libnorm1t64 libobjc-15-dev libobjc4 libopengl0 libopenjp2-7 libopenmpi40 167s libpciaccess0 libpcre2-16-0 libpgm-5.3-0t64 libpocl2-common libpocl2t64 167s libpsm2-2 libqhull-r8.0 libqt5core5t64 libqt5dbus5t64 libqt5designer5 167s libqt5gui5t64 libqt5help5 libqt5network5t64 libqt5opengl5t64 167s libqt5printsupport5t64 libqt5sql5t64 libqt5svg5 libqt5test5t64 167s libqt5widgets5t64 libqt5xml5t64 libquadmath0 libraqm0 librdmacm1t64 167s libsharpyuv0 libsm6 libsodium23 libsource-highlight-common 167s libsource-highlight4t64 libstdc++-15-dev libsz2 libtcl8.6 libtiff6 libtk8.6 167s libtool libtsan2 libubsan1 libucx0 libvulkan1 libwacom-common libwacom9 167s libwayland-client0 libwebp7 libwebpdemux2 libwebpmux3 libx11-xcb1 167s libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 167s libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0 167s libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 167s libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxft2 libxi6 167s libxkbcommon-x11-0 libxnvctrl0 libxrender1 libxshmfence1 libxslt1.1 libxss1 167s libxxf86vm1 libze1 libzmq5 libzopfli1 llvm-18-linker-tools llvm-spirv-18 m4 167s mesa-libgallium ocl-icd-libopencl1 po-debconf pocl-opencl-icd 167s pybuild-plugin-autopkgtest pybuild-plugin-pyproject python-matplotlib-data 167s python3-all python3-astroid python3-asttokens python3-brotli python3-build 167s python3-comm python3-contourpy python3-coverage python3-cycler 167s python3-debugpy python3-decorator python3-dicttoxml python3-executing 167s python3-fabio python3-fonttools python3-gitlab python3-h5py 167s python3-h5py-serial python3-hdf5plugin python3-iniconfig python3-installer 167s python3-ipykernel python3-ipython python3-jedi python3-jupyter-client 167s python3-jupyter-core python3-kiwisolver python3-lxml python3-lz4 167s python3-mako python3-matplotlib python3-matplotlib-inline python3-mpmath 167s python3-nest-asyncio python3-numpy python3-numpy-dev python3-nxtomo 167s python3-nxtomomill python3-opengl python3-parso python3-pil 167s python3-pil.imagetk python3-platformdirs python3-pluggy python3-pooch 167s python3-prompt-toolkit python3-psutil python3-pure-eval python3-pyopencl 167s python3-pyproject-hooks python3-pyqt5 python3-pyqt5.qtopengl 167s python3-pyqt5.qtsvg python3-pyqt5.sip python3-pytest python3-pytools 167s python3-pyunitsystem python3-qtconsole python3-qtpy 167s python3-requests-toolbelt python3-scipy python3-silx python3-stack-data 167s python3-sympy python3-tk python3-tomoscan python3-tornado python3-tqdm 167s python3-traitlets python3-typeshed python3-ufolib2 python3-wcwidth 167s python3-wheel python3-zmq python3-zopfli python3.13 python3.13-minimal 167s python3.13-tk python3.14-tk unicode-data x11-common 167s 0 upgraded, 274 newly installed, 0 to remove and 0 not upgraded. 167s Need to get 308 MB of archives. 167s After this operation, 1280 MB of additional disk space will be used. 167s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.13-minimal amd64 3.13.11-1 [2408 kB] 167s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-numpy-dev amd64 1:2.3.5+ds-3 [147 kB] 167s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7ubuntu1 [260 kB] 167s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 15.2.0-11ubuntu1 [939 kB] 167s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7ubuntu1 [2739 kB] 167s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-numpy amd64 1:2.3.5+ds-3 [8129 kB] 167s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.13 amd64 3.13.11-1 [758 kB] 167s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 m4 amd64 1.4.20-2 [217 kB] 167s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 autoconf all 2.72-3.1ubuntu1 [384 kB] 167s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 autotools-dev all 20240727.1 [43.4 kB] 167s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 automake all 1:1.18.1-3build1 [582 kB] 167s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 autopoint all 0.23.2-1 [620 kB] 167s Get:13 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec0 amd64 1.1.4-2 [22.9 kB] 167s Get:14 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsz2 amd64 1.1.4-2 [5516 B] 167s Get:15 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-310 amd64 1.14.6+repack-2 [1433 kB] 167s Get:16 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-310 amd64 1.14.6+repack-2 [59.9 kB] 167s Get:17 http://ftpmaster.internal/ubuntu resolute/universe amd64 liblzf1 amd64 3.6-4build1 [7490 B] 167s Get:18 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5py-serial amd64 3.15.1-4 [1586 kB] 167s Get:19 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5py all 3.15.1-4 [11.3 kB] 167s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 15.2.0-11ubuntu1 [151 kB] 167s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10build1 [8360 B] 167s Get:22 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpsm2-2 amd64 11.2.185-2.1 [193 kB] 167s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 librdmacm1t64 amd64 61.0-2ubuntu1 [73.7 kB] 168s Get:24 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfabric1 amd64 2.1.0-1.1 [697 kB] 168s Get:25 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhwloc15 amd64 2.12.2-1 [181 kB] 168s Get:26 http://ftpmaster.internal/ubuntu resolute/universe amd64 libamd-comgr3 amd64 7.0.2+dfsg-2 [15.2 MB] 168s Get:27 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhsakmt1 amd64 6.4.3+dfsg-3 [67.5 kB] 168s Get:28 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhsa-runtime64-1 amd64 6.4.3+dfsg-3 [630 kB] 168s Get:29 http://ftpmaster.internal/ubuntu resolute/universe amd64 libamdhip64-6 amd64 6.4.3-4 [10.3 MB] 168s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 libibumad3 amd64 61.0-2ubuntu1 [31.5 kB] 168s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libibmad5 amd64 61.0-2ubuntu1 [44.2 kB] 168s Get:32 http://ftpmaster.internal/ubuntu resolute/universe amd64 libucx0 amd64 1.20.0+ds-4 [951 kB] 168s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 libpciaccess0 amd64 0.18.1-1ubuntu2 [19.0 kB] 168s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 libxnvctrl0 amd64 510.47.03-0ubuntu6 [13.0 kB] 168s Get:35 http://ftpmaster.internal/ubuntu resolute/universe amd64 libze1 amd64 1.27.0-1 [630 kB] 168s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 ocl-icd-libopencl1 amd64 2.3.4-1 [40.9 kB] 168s Get:37 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhwloc-plugins amd64 2.12.2-1 [22.2 kB] 168s Get:38 http://ftpmaster.internal/ubuntu resolute/universe amd64 libopenmpi40 amd64 5.0.8-8ubuntu1 [3384 kB] 168s Get:39 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-openmpi-310 amd64 1.14.6+repack-2 [1492 kB] 168s Get:40 http://ftpmaster.internal/ubuntu resolute/universe amd64 bitshuffle amd64 0.5.2-1build3 [219 kB] 168s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 libisl23 amd64 0.27-1build1 [691 kB] 168s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 libmpc3 amd64 1.3.1-2 [54.8 kB] 169s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15-x86-64-linux-gnu amd64 15.2.0-11ubuntu1 [12.9 MB] 169s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15 amd64 15.2.0-11ubuntu1 [1030 B] 169s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [5746 B] 169s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp amd64 4:15.2.0-4ubuntu1 [22.4 kB] 169s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libcc1-0 amd64 15.2.0-11ubuntu1 [47.4 kB] 169s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libitm1 amd64 15.2.0-11ubuntu1 [29.5 kB] 169s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libasan8 amd64 15.2.0-11ubuntu1 [3070 kB] 169s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsan0 amd64 15.2.0-11ubuntu1 [1360 kB] 169s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 libtsan2 amd64 15.2.0-11ubuntu1 [2757 kB] 169s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libubsan1 amd64 15.2.0-11ubuntu1 [1210 kB] 169s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libhwasan0 amd64 15.2.0-11ubuntu1 [1685 kB] 169s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 libquadmath0 amd64 15.2.0-11ubuntu1 [153 kB] 169s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-15-dev amd64 15.2.0-11ubuntu1 [2863 kB] 169s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15-x86-64-linux-gnu amd64 15.2.0-11ubuntu1 [25.4 MB] 170s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15 amd64 15.2.0-11ubuntu1 [528 kB] 170s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1208 B] 170s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc amd64 4:15.2.0-4ubuntu1 [5024 B] 170s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++-15-dev amd64 15.2.0-11ubuntu1 [2574 kB] 170s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15-x86-64-linux-gnu amd64 15.2.0-11ubuntu1 [14.4 MB] 171s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15 amd64 15.2.0-11ubuntu1 [24.6 kB] 171s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [966 B] 171s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 g++ amd64 4:15.2.0-4ubuntu1 [1100 B] 171s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 build-essential amd64 12.12ubuntu2 [5256 B] 171s Get:66 http://ftpmaster.internal/ubuntu resolute/universe amd64 libllvm18 amd64 1:18.1.8-20ubuntu5 [27.3 MB] 173s Get:67 http://ftpmaster.internal/ubuntu resolute/universe amd64 libclang-cpp18 amd64 1:18.1.8-20ubuntu5 [13.4 MB] 174s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 libgc1 amd64 1:8.2.10-1 [97.9 kB] 174s Get:69 http://ftpmaster.internal/ubuntu resolute/universe amd64 libobjc4 amd64 15.2.0-11ubuntu1 [47.8 kB] 174s Get:70 http://ftpmaster.internal/ubuntu resolute/universe amd64 libobjc-15-dev amd64 15.2.0-11ubuntu1 [196 kB] 174s Get:71 http://ftpmaster.internal/ubuntu resolute/universe amd64 libclang-common-18-dev amd64 1:18.1.8-20ubuntu5 [739 kB] 174s Get:72 http://ftpmaster.internal/ubuntu resolute/universe amd64 llvm-18-linker-tools amd64 1:18.1.8-20ubuntu5 [1305 kB] 174s Get:73 http://ftpmaster.internal/ubuntu resolute/universe amd64 libclang1-18 amd64 1:18.1.8-20ubuntu5 [7710 kB] 175s Get:74 http://ftpmaster.internal/ubuntu resolute/universe amd64 clang-18 amd64 1:18.1.8-20ubuntu5 [79.7 kB] 175s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libdebhelper-perl all 13.28ubuntu1 [97.4 kB] 175s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libtool all 2.5.4-9 [169 kB] 175s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 dh-autoreconf all 21 [12.5 kB] 175s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libarchive-zip-perl all 1.68-1 [90.2 kB] 175s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1build1 [20.6 kB] 175s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 dh-strip-nondeterminism all 1.15.0-1build1 [5110 B] 175s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 debugedit amd64 1:5.2-3 [49.9 kB] 175s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 dwz amd64 0.16-2 [115 kB] 175s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 gettext amd64 0.23.2-1 [1019 kB] 175s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 intltool-debian all 0.35.0+20060710.6build1 [24.1 kB] 175s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 po-debconf all 1.0.22 [215 kB] 175s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 debhelper all 13.28ubuntu1 [916 kB] 175s Get:87 http://ftpmaster.internal/ubuntu resolute/universe amd64 dh-python all 7.20251231 [122 kB] 175s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-mono all 2.37-8build1 [502 kB] 175s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-core all 2.37-8build1 [834 kB] 175s Get:90 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig-config amd64 2.15.0-2.4ubuntu1 [38.1 kB] 175s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 libfontconfig1 amd64 2.15.0-2.4ubuntu1 [143 kB] 175s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig amd64 2.15.0-2.4ubuntu1 [178 kB] 175s Get:93 http://ftpmaster.internal/ubuntu resolute/universe amd64 fonts-lyx all 2.5.0~RC2-3 [171 kB] 175s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 libbabeltrace1 amd64 1.5.11-5 [166 kB] 175s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 libipt2 amd64 2.1.2-3 [49.2 kB] 175s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 libsource-highlight-common all 3.1.9-4.3build2 [64.2 kB] 175s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 libsource-highlight4t64 amd64 3.1.9-4.3build2 [273 kB] 175s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 gdb amd64 16.3-5ubuntu1 [4047 kB] 175s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 libavahi-common-data amd64 0.8-17ubuntu1 [31.3 kB] 175s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 libavahi-common3 amd64 0.8-17ubuntu1 [23.7 kB] 175s Get:101 http://ftpmaster.internal/ubuntu resolute/main amd64 libavahi-client3 amd64 0.8-17ubuntu1 [27.3 kB] 175s Get:102 http://ftpmaster.internal/ubuntu resolute/main amd64 libcups2t64 amd64 2.4.16-1ubuntu1 [273 kB] 175s Get:103 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate0 amd64 1.23-2 [49.9 kB] 175s Get:104 http://ftpmaster.internal/ubuntu resolute/universe amd64 libdouble-conversion3 amd64 3.4.0-1 [41.4 kB] 175s Get:105 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-intel1 amd64 2.4.129-1 [66.7 kB] 175s Get:106 http://ftpmaster.internal/ubuntu resolute/main amd64 libx11-xcb1 amd64 2:1.8.12-1build1 [8044 B] 175s Get:107 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-dri3-0 amd64 1.17.0-2build1 [8036 B] 175s Get:108 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-present0 amd64 1.17.0-2build1 [6446 B] 175s Get:109 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-randr0 amd64 1.17.0-2build1 [19.7 kB] 175s Get:110 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-sync1 amd64 1.17.0-2build1 [10.1 kB] 175s Get:111 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-xfixes0 amd64 1.17.0-2build1 [11.1 kB] 175s Get:112 http://ftpmaster.internal/ubuntu resolute/main amd64 libxshmfence1 amd64 1.3.3-1 [5262 B] 175s Get:113 http://ftpmaster.internal/ubuntu resolute/main amd64 mesa-libgallium amd64 25.2.8-2ubuntu1 [11.1 MB] 176s Get:114 http://ftpmaster.internal/ubuntu resolute/main amd64 libgbm1 amd64 25.2.8-2ubuntu1 [34.0 kB] 176s Get:115 http://ftpmaster.internal/ubuntu resolute/main amd64 libwayland-client0 amd64 1.24.0-2 [28.5 kB] 176s Get:116 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-shm0 amd64 1.17.0-2build1 [6120 B] 176s Get:117 http://ftpmaster.internal/ubuntu resolute/main amd64 libegl-mesa0 amd64 25.2.8-2ubuntu1 [117 kB] 176s Get:118 http://ftpmaster.internal/ubuntu resolute/main amd64 libvulkan1 amd64 1.4.335.0-1 [158 kB] 176s Get:119 http://ftpmaster.internal/ubuntu resolute/main amd64 libgl1-mesa-dri amd64 25.2.8-2ubuntu1 [36.9 kB] 176s Get:120 http://ftpmaster.internal/ubuntu resolute/main amd64 libglvnd0 amd64 1.7.0-3 [64.1 kB] 176s Get:121 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-glx0 amd64 1.17.0-2build1 [27.6 kB] 176s Get:122 http://ftpmaster.internal/ubuntu resolute/main amd64 libxxf86vm1 amd64 1:1.1.4-2 [10.6 kB] 176s Get:123 http://ftpmaster.internal/ubuntu resolute/main amd64 libglx-mesa0 amd64 25.2.8-2ubuntu1 [110 kB] 176s Get:124 http://ftpmaster.internal/ubuntu resolute/main amd64 libglx0 amd64 1.7.0-3 [38.9 kB] 176s Get:125 http://ftpmaster.internal/ubuntu resolute/main amd64 libgl1 amd64 1.7.0-3 [98.3 kB] 176s Get:126 http://ftpmaster.internal/ubuntu resolute/main amd64 libxi6 amd64 2:1.8.2-2 [33.1 kB] 176s Get:127 http://ftpmaster.internal/ubuntu resolute/universe amd64 libglut3.12 amd64 3.4.0-6 [101 kB] 176s Get:128 http://ftpmaster.internal/ubuntu resolute/main amd64 libgraphite2-3 amd64 1.3.14-11ubuntu1 [73.7 kB] 176s Get:129 http://ftpmaster.internal/ubuntu resolute/main amd64 libharfbuzz0b amd64 12.3.0-4 [529 kB] 176s Get:130 http://ftpmaster.internal/ubuntu resolute/main amd64 x11-common all 1:7.7+24ubuntu1 [22.4 kB] 176s Get:131 http://ftpmaster.internal/ubuntu resolute/main amd64 libice6 amd64 2:1.1.1-1build1 [44.0 kB] 176s Get:132 http://ftpmaster.internal/ubuntu resolute/main amd64 libimagequant0 amd64 2.18.0-1build1 [36.3 kB] 176s Get:133 http://ftpmaster.internal/ubuntu resolute/main amd64 libwacom-common all 2.16.1-1 [113 kB] 176s Get:134 http://ftpmaster.internal/ubuntu resolute/main amd64 libwacom9 amd64 2.16.1-1 [28.3 kB] 176s Get:135 http://ftpmaster.internal/ubuntu resolute/main amd64 libinput-bin amd64 1.30.0-1 [24.6 kB] 176s Get:136 http://ftpmaster.internal/ubuntu resolute/main amd64 libmtdev1t64 amd64 1.1.7-1build1 [15.2 kB] 176s Get:137 http://ftpmaster.internal/ubuntu resolute/main amd64 libinput10 amd64 1.30.0-1 [160 kB] 176s Get:138 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8 amd64 2.1.5-4ubuntu2 [152 kB] 176s Get:139 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 176s Get:140 http://ftpmaster.internal/ubuntu resolute/main amd64 liblcms2-2 amd64 2.17-1 [170 kB] 176s Get:141 http://ftpmaster.internal/ubuntu resolute/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu2 [207 kB] 176s Get:142 http://ftpmaster.internal/ubuntu resolute/universe amd64 libllvmspirvlib18.1 amd64 18.1.19-1 [889 kB] 176s Get:143 http://ftpmaster.internal/ubuntu resolute/universe amd64 libmd4c0 amd64 0.5.2-2build1 [43.7 kB] 176s Get:144 http://ftpmaster.internal/ubuntu resolute/universe amd64 libnorm1t64 amd64 1.5.9+dfsg-4 [158 kB] 176s Get:145 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcre2-16-0 amd64 10.46-1 [243 kB] 176s Get:146 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpgm-5.3-0t64 amd64 5.3.128~dfsg-2.1build2 [168 kB] 176s Get:147 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpocl2-common all 6.0-7 [83.0 kB] 176s Get:148 http://ftpmaster.internal/ubuntu resolute/universe amd64 llvm-spirv-18 amd64 18.1.19-1 [543 kB] 176s Get:149 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpocl2t64 amd64 6.0-7 [16.4 MB] 177s Get:150 http://ftpmaster.internal/ubuntu resolute/universe amd64 libqhull-r8.0 amd64 2020.2-8 [197 kB] 177s Get:151 http://ftpmaster.internal/ubuntu resolute/universe amd64 libqt5core5t64 amd64 5.15.17+dfsg-1ubuntu2 [2064 kB] 177s Get:152 http://ftpmaster.internal/ubuntu resolute/universe amd64 libqt5dbus5t64 amd64 5.15.17+dfsg-1ubuntu2 [222 kB] 177s Get:153 http://ftpmaster.internal/ubuntu resolute/main amd64 libegl1 amd64 1.7.0-3 [29.7 kB] 177s Get:154 http://ftpmaster.internal/ubuntu resolute/universe amd64 libqt5network5t64 amd64 5.15.17+dfsg-1ubuntu2 [730 kB] 177s Get:155 http://ftpmaster.internal/ubuntu resolute/main amd64 libsm6 amd64 2:1.2.6-1 [16.4 kB] 177s Get:156 http://ftpmaster.internal/ubuntu resolute/universe amd64 libxcb-icccm4 amd64 0.4.2-1 [11.1 kB] 177s Get:157 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-util1 amd64 0.4.1-1build1 [11.1 kB] 177s Get:158 http://ftpmaster.internal/ubuntu resolute/universe amd64 libxcb-image0 amd64 0.4.0-2build2 [11.0 kB] 177s Get:159 http://ftpmaster.internal/ubuntu resolute/universe amd64 libxcb-keysyms1 amd64 0.4.1-1 [8738 B] 177s Get:160 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-render0 amd64 1.17.0-2build1 [17.4 kB] 177s Get:161 http://ftpmaster.internal/ubuntu resolute/universe amd64 libxcb-render-util0 amd64 0.3.10-1 [10.8 kB] 177s Get:162 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-shape0 amd64 1.17.0-2build1 [6544 B] 177s Get:163 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-xinerama0 amd64 1.17.0-2build1 [5752 B] 177s Get:164 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-xinput0 amd64 1.17.0-2build1 [36.7 kB] 177s Get:165 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-xkb1 amd64 1.17.0-2build1 [35.3 kB] 177s Get:166 http://ftpmaster.internal/ubuntu resolute/main amd64 libxkbcommon-x11-0 amd64 1.12.3-1 [15.0 kB] 177s Get:167 http://ftpmaster.internal/ubuntu resolute/main amd64 libxrender1 amd64 1:0.9.12-1 [19.8 kB] 177s Get:168 http://ftpmaster.internal/ubuntu resolute/universe amd64 libqt5gui5t64 amd64 5.15.17+dfsg-1ubuntu2 [3819 kB] 177s Get:169 http://ftpmaster.internal/ubuntu resolute/universe amd64 libqt5widgets5t64 amd64 5.15.17+dfsg-1ubuntu2 [2584 kB] 178s Get:170 http://ftpmaster.internal/ubuntu resolute/universe amd64 libqt5xml5t64 amd64 5.15.17+dfsg-1ubuntu2 [124 kB] 178s Get:171 http://ftpmaster.internal/ubuntu resolute/universe amd64 libqt5designer5 amd64 5.15.17-4 [2836 kB] 178s Get:172 http://ftpmaster.internal/ubuntu resolute/universe amd64 libqt5sql5t64 amd64 5.15.17+dfsg-1ubuntu2 [123 kB] 178s Get:173 http://ftpmaster.internal/ubuntu resolute/universe amd64 libqt5help5 amd64 5.15.17-4 [163 kB] 178s Get:174 http://ftpmaster.internal/ubuntu resolute/universe amd64 libqt5opengl5t64 amd64 5.15.17+dfsg-1ubuntu2 [150 kB] 178s Get:175 http://ftpmaster.internal/ubuntu resolute/universe amd64 libqt5printsupport5t64 amd64 5.15.17+dfsg-1ubuntu2 [209 kB] 178s Get:176 http://ftpmaster.internal/ubuntu resolute/universe amd64 libqt5svg5 amd64 5.15.17-3 [148 kB] 178s Get:177 http://ftpmaster.internal/ubuntu resolute/universe amd64 libqt5test5t64 amd64 5.15.17+dfsg-1ubuntu2 [150 kB] 178s Get:178 http://ftpmaster.internal/ubuntu resolute/main amd64 libraqm0 amd64 0.10.3-1 [15.4 kB] 178s Get:179 http://ftpmaster.internal/ubuntu resolute/main amd64 libsharpyuv0 amd64 1.5.0-0.1build1 [17.6 kB] 178s Get:180 http://ftpmaster.internal/ubuntu resolute/main amd64 libsodium23 amd64 1.0.18-2 [165 kB] 178s Get:181 http://ftpmaster.internal/ubuntu resolute/main amd64 libtcl8.6 amd64 8.6.17+dfsg-1 [1036 kB] 178s Get:182 http://ftpmaster.internal/ubuntu resolute/main amd64 libjbig0 amd64 2.1-6.1ubuntu3 [30.0 kB] 178s Get:183 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebp7 amd64 1.5.0-0.1build1 [264 kB] 178s Get:184 http://ftpmaster.internal/ubuntu resolute/main amd64 libtiff6 amd64 4.7.0-3ubuntu3 [209 kB] 178s Get:185 http://ftpmaster.internal/ubuntu resolute/main amd64 libxft2 amd64 2.3.6-1build2 [45.1 kB] 178s Get:186 http://ftpmaster.internal/ubuntu resolute/main amd64 libxss1 amd64 1:1.2.3-1build4 [7084 B] 178s Get:187 http://ftpmaster.internal/ubuntu resolute/main amd64 libtk8.6 amd64 8.6.17-1 [823 kB] 178s Get:188 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebpdemux2 amd64 1.5.0-0.1build1 [12.8 kB] 178s Get:189 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebpmux3 amd64 1.5.0-0.1build1 [26.4 kB] 178s Get:190 http://ftpmaster.internal/ubuntu resolute/main amd64 libxslt1.1 amd64 1.1.43-0.3 [172 kB] 178s Get:191 http://ftpmaster.internal/ubuntu resolute/universe amd64 libzmq5 amd64 4.3.5-1build3 [262 kB] 178s Get:192 http://ftpmaster.internal/ubuntu resolute/universe amd64 libzopfli1 amd64 1.0.3-3 [141 kB] 178s Get:193 http://ftpmaster.internal/ubuntu resolute/universe amd64 pybuild-plugin-autopkgtest all 7.20251231 [1748 B] 178s Get:194 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pyproject-hooks all 1.2.0-1 [10.2 kB] 178s Get:195 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-wheel all 0.46.1-2 [22.1 kB] 178s Get:196 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-build all 1.2.2-5 [30.9 kB] 178s Get:197 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-installer all 0.7.0+dfsg1-3 [17.4 kB] 178s Get:198 http://ftpmaster.internal/ubuntu resolute/universe amd64 pybuild-plugin-pyproject all 7.20251231 [1714 B] 178s Get:199 http://ftpmaster.internal/ubuntu resolute/universe amd64 python-matplotlib-data all 3.10.7+dfsg1-1 [2930 kB] 178s Get:200 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-all amd64 3.14.2-1 [890 B] 178s Get:201 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-astroid all 4.0.2-1ubuntu1 [172 kB] 178s Get:202 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-asttokens all 3.0.1-1 [20.7 kB] 178s Get:203 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-brotli amd64 1.1.0-2build6 [340 kB] 178s Get:204 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-traitlets all 5.14.3+really5.14.3-2 [71.7 kB] 178s Get:205 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-comm all 0.2.1-1build1 [7148 B] 178s Get:206 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-contourpy amd64 1.3.3-1 [255 kB] 178s Get:207 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-coverage amd64 7.8.2+dfsg1-1ubuntu1 [159 kB] 178s Get:208 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-cycler all 0.12.1-2 [9850 B] 178s Get:209 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-debugpy amd64 1.8.19+ds-1ubuntu1 [942 kB] 178s Get:210 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-decorator all 5.2.1-2 [28.1 kB] 178s Get:211 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-dicttoxml all 1.7.16-2 [22.7 kB] 178s Get:212 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-executing all 2.2.1-0.1 [26.2 kB] 178s Get:213 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-lxml amd64 6.0.2-1 [2333 kB] 178s Get:214 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-lz4 amd64 4.4.5+dfsg-1 [27.7 kB] 178s Get:215 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-scipy amd64 1.16.3-3 [18.8 MB] 179s Get:216 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-mpmath all 1.3.0-2 [423 kB] 179s Get:217 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-sympy all 1.14.0-2 [4306 kB] 179s Get:218 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-ufolib2 all 0.18.1+dfsg1-1 [33.7 kB] 179s Get:219 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-zopfli amd64 0.4.0-1 [11.1 kB] 179s Get:220 http://ftpmaster.internal/ubuntu resolute/universe amd64 unicode-data all 16.0.0-1build1 [9543 kB] 180s Get:221 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-fonttools amd64 4.61.1-3 [1742 kB] 180s Get:222 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-requests-toolbelt all 1.0.0-4 [37.0 kB] 180s Get:223 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-gitlab all 1:4.9.0-1.1 [75.1 kB] 180s Get:224 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-hdf5plugin all 5.1.0-1 [23.3 kB] 180s Get:225 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-iniconfig all 2.1.0-2 [6962 B] 180s Get:226 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-parso all 0.8.5-1 [68.0 kB] 180s Get:227 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-typeshed all 0.0~git20241223.ea91db2-4 [1554 kB] 180s Get:228 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-jedi all 0.19.1+ds1-1build1 [694 kB] 180s Get:229 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-matplotlib-inline all 0.2.1-1 [9462 B] 180s Get:230 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-wcwidth all 0.2.14+dfsg1-1build1 [26.5 kB] 180s Get:231 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-prompt-toolkit all 3.0.52-2 [258 kB] 180s Get:232 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pure-eval all 0.2.3-1 [11.4 kB] 180s Get:233 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-stack-data all 0.6.3-3 [22.2 kB] 180s Get:234 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-ipython all 8.35.0-2 [575 kB] 180s Get:235 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-platformdirs all 4.5.1-1 [17.1 kB] 180s Get:236 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-jupyter-core all 5.9.1-1 [28.9 kB] 180s Get:237 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-psutil amd64 7.1.0-1ubuntu1 [191 kB] 180s Get:238 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-tornado amd64 6.5.4-0.1 [306 kB] 180s Get:239 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-zmq amd64 27.1.0-1 [234 kB] 180s Get:240 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-jupyter-client all 8.7.0-1 [78.5 kB] 180s Get:241 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-nest-asyncio all 1.6.0-1 [6686 B] 180s Get:242 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-ipykernel all 6.30.1-1 [82.8 kB] 180s Get:243 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-kiwisolver amd64 1.4.10~rc0-1 [65.5 kB] 181s Get:244 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-mako all 1.3.10-3build1 [63.9 kB] 181s Get:245 http://ftpmaster.internal/ubuntu resolute/main amd64 libopenjp2-7 amd64 2.5.4-1 [188 kB] 181s Get:246 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-pil amd64 12.0.0-1ubuntu1 [494 kB] 181s Get:247 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.13-tk amd64 3.13.11-1 [108 kB] 181s Get:248 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.14-tk amd64 3.14.2-1 [109 kB] 181s Get:249 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-tk amd64 3.14.2-1 [11.2 kB] 181s Get:250 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pil.imagetk amd64 12.0.0-1ubuntu1 [9700 B] 181s Get:251 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-matplotlib amd64 3.10.7+dfsg1-1 [17.2 MB] 181s Get:252 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pyunitsystem all 2.0.0-1 [6828 B] 181s Get:253 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pyqt5.sip amd64 12.17.2-1 [81.1 kB] 181s Get:254 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pyqt5 amd64 5.15.11+dfsg-3 [2737 kB] 181s Get:255 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-fabio amd64 2024.9.0-9 [810 kB] 181s Get:256 http://ftpmaster.internal/ubuntu resolute/main amd64 libgles2 amd64 1.7.0-3 [17.5 kB] 181s Get:257 http://ftpmaster.internal/ubuntu resolute/main amd64 libopengl0 amd64 1.7.0-3 [32.8 kB] 181s Get:258 http://ftpmaster.internal/ubuntu resolute/universe amd64 libglu1-mesa amd64 9.0.2-1.1build2 [159 kB] 181s Get:259 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-opengl all 3.1.10+dfsg-1 [633 kB] 181s Get:260 http://ftpmaster.internal/ubuntu resolute/universe amd64 pocl-opencl-icd amd64 6.0-7 [7170 B] 181s Get:261 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pytools all 2025.1.2-1 [69.9 kB] 181s Get:262 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pyopencl amd64 2025.1-2 [498 kB] 181s Get:263 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pyqt5.qtopengl amd64 5.15.11+dfsg-3 [128 kB] 181s Get:264 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pyqt5.qtsvg amd64 5.15.11+dfsg-3 [30.2 kB] 181s Get:265 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-qtpy all 2.4.3-1 [57.5 kB] 181s Get:266 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-qtconsole all 5.6.1-4 [84.7 kB] 181s Get:267 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pooch all 1.8.2-1 [49.9 kB] 181s Get:268 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-silx amd64 2.2.1+dfsg-5 [3054 kB] 181s Get:269 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-nxtomo all 1.3.0.dev9-1 [52.9 kB] 181s Get:270 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-tomoscan all 2.2.0~dev0-2 [104 kB] 181s Get:271 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-tqdm all 4.67.1-7 [93.3 kB] 181s Get:272 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-nxtomomill all 1.1.0-6 [101 kB] 181s Get:273 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pluggy all 1.6.0-2 [21.1 kB] 181s Get:274 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pytest all 9.0.2-2 [277 kB] 182s Fetched 308 MB in 15s (21.1 MB/s) 182s Selecting previously unselected package python3.13-minimal. 182s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 124920 files and directories currently installed.) 182s Preparing to unpack .../000-python3.13-minimal_3.13.11-1_amd64.deb ... 182s Unpacking python3.13-minimal (3.13.11-1) ... 182s Selecting previously unselected package python3-numpy-dev:amd64. 182s Preparing to unpack .../001-python3-numpy-dev_1%3a2.3.5+ds-3_amd64.deb ... 182s Unpacking python3-numpy-dev:amd64 (1:2.3.5+ds-3) ... 182s Selecting previously unselected package libblas3:amd64. 182s Preparing to unpack .../002-libblas3_3.12.1-7ubuntu1_amd64.deb ... 182s Unpacking libblas3:amd64 (3.12.1-7ubuntu1) ... 182s Selecting previously unselected package libgfortran5:amd64. 182s Preparing to unpack .../003-libgfortran5_15.2.0-11ubuntu1_amd64.deb ... 182s Unpacking libgfortran5:amd64 (15.2.0-11ubuntu1) ... 182s Selecting previously unselected package liblapack3:amd64. 182s Preparing to unpack .../004-liblapack3_3.12.1-7ubuntu1_amd64.deb ... 182s Unpacking liblapack3:amd64 (3.12.1-7ubuntu1) ... 182s Selecting previously unselected package python3-numpy. 182s Preparing to unpack .../005-python3-numpy_1%3a2.3.5+ds-3_amd64.deb ... 182s Unpacking python3-numpy (1:2.3.5+ds-3) ... 182s Selecting previously unselected package python3.13. 182s Preparing to unpack .../006-python3.13_3.13.11-1_amd64.deb ... 182s Unpacking python3.13 (3.13.11-1) ... 182s Selecting previously unselected package m4. 182s Preparing to unpack .../007-m4_1.4.20-2_amd64.deb ... 182s Unpacking m4 (1.4.20-2) ... 182s Selecting previously unselected package autoconf. 182s Preparing to unpack .../008-autoconf_2.72-3.1ubuntu1_all.deb ... 182s Unpacking autoconf (2.72-3.1ubuntu1) ... 182s Selecting previously unselected package autotools-dev. 182s Preparing to unpack .../009-autotools-dev_20240727.1_all.deb ... 182s Unpacking autotools-dev (20240727.1) ... 182s Selecting previously unselected package automake. 182s Preparing to unpack .../010-automake_1%3a1.18.1-3build1_all.deb ... 182s Unpacking automake (1:1.18.1-3build1) ... 182s Selecting previously unselected package autopoint. 182s Preparing to unpack .../011-autopoint_0.23.2-1_all.deb ... 182s Unpacking autopoint (0.23.2-1) ... 182s Selecting previously unselected package libaec0:amd64. 182s Preparing to unpack .../012-libaec0_1.1.4-2_amd64.deb ... 182s Unpacking libaec0:amd64 (1.1.4-2) ... 182s Selecting previously unselected package libsz2:amd64. 182s Preparing to unpack .../013-libsz2_1.1.4-2_amd64.deb ... 182s Unpacking libsz2:amd64 (1.1.4-2) ... 182s Selecting previously unselected package libhdf5-310:amd64. 182s Preparing to unpack .../014-libhdf5-310_1.14.6+repack-2_amd64.deb ... 182s Unpacking libhdf5-310:amd64 (1.14.6+repack-2) ... 182s Selecting previously unselected package libhdf5-hl-310:amd64. 182s Preparing to unpack .../015-libhdf5-hl-310_1.14.6+repack-2_amd64.deb ... 182s Unpacking libhdf5-hl-310:amd64 (1.14.6+repack-2) ... 182s Selecting previously unselected package liblzf1:amd64. 182s Preparing to unpack .../016-liblzf1_3.6-4build1_amd64.deb ... 182s Unpacking liblzf1:amd64 (3.6-4build1) ... 182s Selecting previously unselected package python3-h5py-serial. 182s Preparing to unpack .../017-python3-h5py-serial_3.15.1-4_amd64.deb ... 182s Unpacking python3-h5py-serial (3.15.1-4) ... 182s Selecting previously unselected package python3-h5py. 182s Preparing to unpack .../018-python3-h5py_3.15.1-4_all.deb ... 182s Unpacking python3-h5py (3.15.1-4) ... 182s Selecting previously unselected package libgomp1:amd64. 182s Preparing to unpack .../019-libgomp1_15.2.0-11ubuntu1_amd64.deb ... 182s Unpacking libgomp1:amd64 (15.2.0-11ubuntu1) ... 182s Selecting previously unselected package libevent-pthreads-2.1-7t64:amd64. 182s Preparing to unpack .../020-libevent-pthreads-2.1-7t64_2.1.12-stable-10build1_amd64.deb ... 182s Unpacking libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10build1) ... 182s Selecting previously unselected package libpsm2-2. 182s Preparing to unpack .../021-libpsm2-2_11.2.185-2.1_amd64.deb ... 182s Unpacking libpsm2-2 (11.2.185-2.1) ... 182s Selecting previously unselected package librdmacm1t64:amd64. 182s Preparing to unpack .../022-librdmacm1t64_61.0-2ubuntu1_amd64.deb ... 182s Unpacking librdmacm1t64:amd64 (61.0-2ubuntu1) ... 182s Selecting previously unselected package libfabric1:amd64. 182s Preparing to unpack .../023-libfabric1_2.1.0-1.1_amd64.deb ... 182s Unpacking libfabric1:amd64 (2.1.0-1.1) ... 182s Selecting previously unselected package libhwloc15:amd64. 182s Preparing to unpack .../024-libhwloc15_2.12.2-1_amd64.deb ... 182s Unpacking libhwloc15:amd64 (2.12.2-1) ... 182s Selecting previously unselected package libamd-comgr3:amd64. 182s Preparing to unpack .../025-libamd-comgr3_7.0.2+dfsg-2_amd64.deb ... 182s Unpacking libamd-comgr3:amd64 (7.0.2+dfsg-2) ... 182s Selecting previously unselected package libhsakmt1:amd64. 182s Preparing to unpack .../026-libhsakmt1_6.4.3+dfsg-3_amd64.deb ... 182s Unpacking libhsakmt1:amd64 (6.4.3+dfsg-3) ... 182s Selecting previously unselected package libhsa-runtime64-1:amd64. 182s Preparing to unpack .../027-libhsa-runtime64-1_6.4.3+dfsg-3_amd64.deb ... 182s Unpacking libhsa-runtime64-1:amd64 (6.4.3+dfsg-3) ... 182s Selecting previously unselected package libamdhip64-6:amd64. 182s Preparing to unpack .../028-libamdhip64-6_6.4.3-4_amd64.deb ... 182s Unpacking libamdhip64-6:amd64 (6.4.3-4) ... 182s Selecting previously unselected package libibumad3:amd64. 183s Preparing to unpack .../029-libibumad3_61.0-2ubuntu1_amd64.deb ... 183s Unpacking libibumad3:amd64 (61.0-2ubuntu1) ... 183s Selecting previously unselected package libibmad5:amd64. 183s Preparing to unpack .../030-libibmad5_61.0-2ubuntu1_amd64.deb ... 183s Unpacking libibmad5:amd64 (61.0-2ubuntu1) ... 183s Selecting previously unselected package libucx0:amd64. 183s Preparing to unpack .../031-libucx0_1.20.0+ds-4_amd64.deb ... 183s Unpacking libucx0:amd64 (1.20.0+ds-4) ... 183s Selecting previously unselected package libpciaccess0:amd64. 183s Preparing to unpack .../032-libpciaccess0_0.18.1-1ubuntu2_amd64.deb ... 183s Unpacking libpciaccess0:amd64 (0.18.1-1ubuntu2) ... 183s Selecting previously unselected package libxnvctrl0:amd64. 183s Preparing to unpack .../033-libxnvctrl0_510.47.03-0ubuntu6_amd64.deb ... 183s Unpacking libxnvctrl0:amd64 (510.47.03-0ubuntu6) ... 183s Selecting previously unselected package libze1:amd64. 183s Preparing to unpack .../034-libze1_1.27.0-1_amd64.deb ... 183s Unpacking libze1:amd64 (1.27.0-1) ... 183s Selecting previously unselected package ocl-icd-libopencl1:amd64. 183s Preparing to unpack .../035-ocl-icd-libopencl1_2.3.4-1_amd64.deb ... 183s Unpacking ocl-icd-libopencl1:amd64 (2.3.4-1) ... 183s Selecting previously unselected package libhwloc-plugins:amd64. 183s Preparing to unpack .../036-libhwloc-plugins_2.12.2-1_amd64.deb ... 183s Unpacking libhwloc-plugins:amd64 (2.12.2-1) ... 183s Selecting previously unselected package libopenmpi40:amd64. 183s Preparing to unpack .../037-libopenmpi40_5.0.8-8ubuntu1_amd64.deb ... 183s Unpacking libopenmpi40:amd64 (5.0.8-8ubuntu1) ... 183s Selecting previously unselected package libhdf5-openmpi-310:amd64. 183s Preparing to unpack .../038-libhdf5-openmpi-310_1.14.6+repack-2_amd64.deb ... 183s Unpacking libhdf5-openmpi-310:amd64 (1.14.6+repack-2) ... 183s Selecting previously unselected package bitshuffle. 183s Preparing to unpack .../039-bitshuffle_0.5.2-1build3_amd64.deb ... 183s Unpacking bitshuffle (0.5.2-1build3) ... 183s Selecting previously unselected package libisl23:amd64. 183s Preparing to unpack .../040-libisl23_0.27-1build1_amd64.deb ... 183s Unpacking libisl23:amd64 (0.27-1build1) ... 183s Selecting previously unselected package libmpc3:amd64. 183s Preparing to unpack .../041-libmpc3_1.3.1-2_amd64.deb ... 183s Unpacking libmpc3:amd64 (1.3.1-2) ... 183s Selecting previously unselected package cpp-15-x86-64-linux-gnu. 183s Preparing to unpack .../042-cpp-15-x86-64-linux-gnu_15.2.0-11ubuntu1_amd64.deb ... 183s Unpacking cpp-15-x86-64-linux-gnu (15.2.0-11ubuntu1) ... 183s Selecting previously unselected package cpp-15. 183s Preparing to unpack .../043-cpp-15_15.2.0-11ubuntu1_amd64.deb ... 183s Unpacking cpp-15 (15.2.0-11ubuntu1) ... 183s Selecting previously unselected package cpp-x86-64-linux-gnu. 183s Preparing to unpack .../044-cpp-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 183s Unpacking cpp-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 183s Selecting previously unselected package cpp. 183s Preparing to unpack .../045-cpp_4%3a15.2.0-4ubuntu1_amd64.deb ... 183s Unpacking cpp (4:15.2.0-4ubuntu1) ... 183s Selecting previously unselected package libcc1-0:amd64. 183s Preparing to unpack .../046-libcc1-0_15.2.0-11ubuntu1_amd64.deb ... 183s Unpacking libcc1-0:amd64 (15.2.0-11ubuntu1) ... 183s Selecting previously unselected package libitm1:amd64. 183s Preparing to unpack .../047-libitm1_15.2.0-11ubuntu1_amd64.deb ... 183s Unpacking libitm1:amd64 (15.2.0-11ubuntu1) ... 183s Selecting previously unselected package libasan8:amd64. 183s Preparing to unpack .../048-libasan8_15.2.0-11ubuntu1_amd64.deb ... 183s Unpacking libasan8:amd64 (15.2.0-11ubuntu1) ... 183s Selecting previously unselected package liblsan0:amd64. 183s Preparing to unpack .../049-liblsan0_15.2.0-11ubuntu1_amd64.deb ... 183s Unpacking liblsan0:amd64 (15.2.0-11ubuntu1) ... 183s Selecting previously unselected package libtsan2:amd64. 183s Preparing to unpack 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184s Unpacking libllvm18:amd64 (1:18.1.8-20ubuntu5) ... 184s Selecting previously unselected package libclang-cpp18. 184s Preparing to unpack .../066-libclang-cpp18_1%3a18.1.8-20ubuntu5_amd64.deb ... 184s Unpacking libclang-cpp18 (1:18.1.8-20ubuntu5) ... 184s Selecting previously unselected package libgc1:amd64. 184s Preparing to unpack .../067-libgc1_1%3a8.2.10-1_amd64.deb ... 184s Unpacking libgc1:amd64 (1:8.2.10-1) ... 184s Selecting previously unselected package libobjc4:amd64. 184s Preparing to unpack .../068-libobjc4_15.2.0-11ubuntu1_amd64.deb ... 184s Unpacking libobjc4:amd64 (15.2.0-11ubuntu1) ... 184s Selecting previously unselected package libobjc-15-dev:amd64. 184s Preparing to unpack .../069-libobjc-15-dev_15.2.0-11ubuntu1_amd64.deb ... 184s Unpacking libobjc-15-dev:amd64 (15.2.0-11ubuntu1) ... 184s Selecting previously unselected package libclang-common-18-dev:amd64. 184s Preparing to unpack .../070-libclang-common-18-dev_1%3a18.1.8-20ubuntu5_amd64.deb ... 184s Unpacking libclang-common-18-dev:amd64 (1:18.1.8-20ubuntu5) ... 184s Selecting previously unselected package llvm-18-linker-tools. 184s Preparing to unpack .../071-llvm-18-linker-tools_1%3a18.1.8-20ubuntu5_amd64.deb ... 184s Unpacking llvm-18-linker-tools (1:18.1.8-20ubuntu5) ... 184s Selecting previously unselected package libclang1-18. 184s Preparing to unpack .../072-libclang1-18_1%3a18.1.8-20ubuntu5_amd64.deb ... 184s Unpacking libclang1-18 (1:18.1.8-20ubuntu5) ... 184s Selecting previously unselected package clang-18. 184s Preparing to unpack .../073-clang-18_1%3a18.1.8-20ubuntu5_amd64.deb ... 184s Unpacking clang-18 (1:18.1.8-20ubuntu5) ... 184s Selecting previously unselected package libdebhelper-perl. 184s Preparing to unpack .../074-libdebhelper-perl_13.28ubuntu1_all.deb ... 184s Unpacking libdebhelper-perl (13.28ubuntu1) ... 184s Selecting previously unselected package libtool. 184s Preparing to unpack .../075-libtool_2.5.4-9_all.deb ... 184s Unpacking libtool (2.5.4-9) ... 184s Selecting previously unselected package dh-autoreconf. 184s Preparing to unpack .../076-dh-autoreconf_21_all.deb ... 184s Unpacking dh-autoreconf (21) ... 184s Selecting previously unselected package libarchive-zip-perl. 184s Preparing to unpack .../077-libarchive-zip-perl_1.68-1_all.deb ... 184s Unpacking libarchive-zip-perl (1.68-1) ... 184s Selecting previously unselected package libfile-stripnondeterminism-perl. 184s Preparing to unpack .../078-libfile-stripnondeterminism-perl_1.15.0-1build1_all.deb ... 184s Unpacking libfile-stripnondeterminism-perl (1.15.0-1build1) ... 184s Selecting previously unselected package dh-strip-nondeterminism. 184s Preparing to unpack .../079-dh-strip-nondeterminism_1.15.0-1build1_all.deb ... 184s Unpacking dh-strip-nondeterminism (1.15.0-1build1) ... 184s Selecting previously unselected package debugedit. 184s Preparing to unpack .../080-debugedit_1%3a5.2-3_amd64.deb ... 184s Unpacking debugedit (1:5.2-3) ... 184s Selecting previously unselected package dwz. 184s Preparing to unpack .../081-dwz_0.16-2_amd64.deb ... 184s Unpacking dwz (0.16-2) ... 184s Selecting previously unselected package gettext. 185s Preparing to unpack .../082-gettext_0.23.2-1_amd64.deb ... 185s Unpacking gettext (0.23.2-1) ... 185s Selecting previously unselected package intltool-debian. 185s Preparing to unpack .../083-intltool-debian_0.35.0+20060710.6build1_all.deb ... 185s Unpacking intltool-debian (0.35.0+20060710.6build1) ... 185s Selecting previously unselected package po-debconf. 185s Preparing to unpack .../084-po-debconf_1.0.22_all.deb ... 185s Unpacking po-debconf (1.0.22) ... 185s Selecting previously unselected package debhelper. 185s Preparing to unpack .../085-debhelper_13.28ubuntu1_all.deb ... 185s Unpacking debhelper (13.28ubuntu1) ... 185s Selecting previously unselected package dh-python. 185s Preparing to unpack .../086-dh-python_7.20251231_all.deb ... 185s Unpacking dh-python (7.20251231) ... 185s Selecting previously unselected package fonts-dejavu-mono. 185s Preparing to unpack .../087-fonts-dejavu-mono_2.37-8build1_all.deb ... 185s Unpacking fonts-dejavu-mono (2.37-8build1) ... 185s Selecting previously unselected package fonts-dejavu-core. 185s Preparing to unpack .../088-fonts-dejavu-core_2.37-8build1_all.deb ... 185s Unpacking fonts-dejavu-core (2.37-8build1) ... 185s Selecting previously unselected package fontconfig-config. 185s Preparing to unpack .../089-fontconfig-config_2.15.0-2.4ubuntu1_amd64.deb ... 185s Unpacking fontconfig-config (2.15.0-2.4ubuntu1) ... 185s Selecting previously unselected package libfontconfig1:amd64. 185s Preparing to unpack .../090-libfontconfig1_2.15.0-2.4ubuntu1_amd64.deb ... 185s Unpacking libfontconfig1:amd64 (2.15.0-2.4ubuntu1) ... 185s Selecting previously unselected package fontconfig. 185s Preparing to unpack .../091-fontconfig_2.15.0-2.4ubuntu1_amd64.deb ... 185s Unpacking fontconfig (2.15.0-2.4ubuntu1) ... 185s Selecting previously unselected package fonts-lyx. 185s Preparing to unpack .../092-fonts-lyx_2.5.0~RC2-3_all.deb ... 185s Unpacking fonts-lyx (2.5.0~RC2-3) ... 185s Selecting previously unselected package libbabeltrace1:amd64. 185s Preparing to unpack .../093-libbabeltrace1_1.5.11-5_amd64.deb ... 185s Unpacking libbabeltrace1:amd64 (1.5.11-5) ... 185s Selecting previously unselected package libipt2. 185s Preparing to unpack .../094-libipt2_2.1.2-3_amd64.deb ... 185s Unpacking libipt2 (2.1.2-3) ... 185s Selecting previously unselected package libsource-highlight-common. 185s Preparing to unpack .../095-libsource-highlight-common_3.1.9-4.3build2_all.deb ... 185s Unpacking libsource-highlight-common (3.1.9-4.3build2) ... 185s Selecting previously unselected package libsource-highlight4t64:amd64. 185s Preparing to unpack .../096-libsource-highlight4t64_3.1.9-4.3build2_amd64.deb ... 185s Unpacking libsource-highlight4t64:amd64 (3.1.9-4.3build2) ... 185s Selecting previously unselected package gdb. 185s Preparing to unpack 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.../117-libvulkan1_1.4.335.0-1_amd64.deb ... 185s Unpacking libvulkan1:amd64 (1.4.335.0-1) ... 185s Selecting previously unselected package libgl1-mesa-dri:amd64. 185s Preparing to unpack .../118-libgl1-mesa-dri_25.2.8-2ubuntu1_amd64.deb ... 185s Unpacking libgl1-mesa-dri:amd64 (25.2.8-2ubuntu1) ... 185s Selecting previously unselected package libglvnd0:amd64. 185s Preparing to unpack .../119-libglvnd0_1.7.0-3_amd64.deb ... 185s Unpacking libglvnd0:amd64 (1.7.0-3) ... 185s Selecting previously unselected package libxcb-glx0:amd64. 185s Preparing to unpack .../120-libxcb-glx0_1.17.0-2build1_amd64.deb ... 185s Unpacking libxcb-glx0:amd64 (1.17.0-2build1) ... 185s Selecting previously unselected package libxxf86vm1:amd64. 185s Preparing to unpack .../121-libxxf86vm1_1%3a1.1.4-2_amd64.deb ... 185s Unpacking libxxf86vm1:amd64 (1:1.1.4-2) ... 185s Selecting previously unselected package libglx-mesa0:amd64. 185s Preparing to unpack .../122-libglx-mesa0_25.2.8-2ubuntu1_amd64.deb ... 185s 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185s Preparing to unpack .../128-libharfbuzz0b_12.3.0-4_amd64.deb ... 185s Unpacking libharfbuzz0b:amd64 (12.3.0-4) ... 185s Selecting previously unselected package x11-common. 185s Preparing to unpack .../129-x11-common_1%3a7.7+24ubuntu1_all.deb ... 185s Unpacking x11-common (1:7.7+24ubuntu1) ... 186s Selecting previously unselected package libice6:amd64. 186s Preparing to unpack .../130-libice6_2%3a1.1.1-1build1_amd64.deb ... 186s Unpacking libice6:amd64 (2:1.1.1-1build1) ... 186s Selecting previously unselected package libimagequant0:amd64. 186s Preparing to unpack .../131-libimagequant0_2.18.0-1build1_amd64.deb ... 186s Unpacking libimagequant0:amd64 (2.18.0-1build1) ... 186s Selecting previously unselected package libwacom-common. 186s Preparing to unpack .../132-libwacom-common_2.16.1-1_all.deb ... 186s Unpacking libwacom-common (2.16.1-1) ... 186s Selecting previously unselected package libwacom9:amd64. 186s Preparing to unpack .../133-libwacom9_2.16.1-1_amd64.deb ... 186s Unpacking libwacom9:amd64 (2.16.1-1) ... 186s Selecting previously unselected package libinput-bin. 186s Preparing to unpack .../134-libinput-bin_1.30.0-1_amd64.deb ... 186s Unpacking libinput-bin (1.30.0-1) ... 186s Selecting previously unselected package libmtdev1t64:amd64. 186s Preparing to unpack .../135-libmtdev1t64_1.1.7-1build1_amd64.deb ... 186s Unpacking libmtdev1t64:amd64 (1.1.7-1build1) ... 186s Selecting previously unselected package libinput10:amd64. 186s Preparing to unpack .../136-libinput10_1.30.0-1_amd64.deb ... 186s Unpacking libinput10:amd64 (1.30.0-1) ... 186s Selecting previously unselected package libjpeg-turbo8:amd64. 186s Preparing to unpack .../137-libjpeg-turbo8_2.1.5-4ubuntu2_amd64.deb ... 186s Unpacking libjpeg-turbo8:amd64 (2.1.5-4ubuntu2) ... 186s Selecting previously unselected package libjpeg8:amd64. 186s Preparing to unpack .../138-libjpeg8_8c-2ubuntu11_amd64.deb ... 186s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 186s Selecting previously unselected package liblcms2-2:amd64. 186s Preparing to unpack .../139-liblcms2-2_2.17-1_amd64.deb ... 186s Unpacking liblcms2-2:amd64 (2.17-1) ... 186s Selecting previously unselected package liblerc4:amd64. 186s Preparing to unpack .../140-liblerc4_4.0.0+ds-5ubuntu2_amd64.deb ... 186s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu2) ... 186s Selecting previously unselected package libllvmspirvlib18.1:amd64. 186s Preparing to unpack .../141-libllvmspirvlib18.1_18.1.19-1_amd64.deb ... 186s Unpacking libllvmspirvlib18.1:amd64 (18.1.19-1) ... 186s Selecting previously unselected package libmd4c0:amd64. 186s Preparing to unpack .../142-libmd4c0_0.5.2-2build1_amd64.deb ... 186s Unpacking libmd4c0:amd64 (0.5.2-2build1) ... 186s Selecting previously unselected package libnorm1t64:amd64. 186s Preparing to unpack .../143-libnorm1t64_1.5.9+dfsg-4_amd64.deb ... 186s Unpacking libnorm1t64:amd64 (1.5.9+dfsg-4) ... 186s Selecting previously unselected package libpcre2-16-0:amd64. 186s Preparing to unpack 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186s Selecting previously unselected package libxkbcommon-x11-0:amd64. 186s Preparing to unpack .../165-libxkbcommon-x11-0_1.12.3-1_amd64.deb ... 186s Unpacking libxkbcommon-x11-0:amd64 (1.12.3-1) ... 186s Selecting previously unselected package libxrender1:amd64. 186s Preparing to unpack .../166-libxrender1_1%3a0.9.12-1_amd64.deb ... 186s Unpacking libxrender1:amd64 (1:0.9.12-1) ... 186s Selecting previously unselected package libqt5gui5t64:amd64. 186s Preparing to unpack .../167-libqt5gui5t64_5.15.17+dfsg-1ubuntu2_amd64.deb ... 186s Unpacking libqt5gui5t64:amd64 (5.15.17+dfsg-1ubuntu2) ... 186s Selecting previously unselected package libqt5widgets5t64:amd64. 186s Preparing to unpack .../168-libqt5widgets5t64_5.15.17+dfsg-1ubuntu2_amd64.deb ... 186s Unpacking libqt5widgets5t64:amd64 (5.15.17+dfsg-1ubuntu2) ... 186s Selecting previously unselected package libqt5xml5t64:amd64. 186s Preparing to unpack .../169-libqt5xml5t64_5.15.17+dfsg-1ubuntu2_amd64.deb ... 186s Unpacking libqt5xml5t64:amd64 (5.15.17+dfsg-1ubuntu2) ... 186s Selecting previously unselected package libqt5designer5:amd64. 186s Preparing to unpack .../170-libqt5designer5_5.15.17-4_amd64.deb ... 186s Unpacking libqt5designer5:amd64 (5.15.17-4) ... 186s Selecting previously unselected package libqt5sql5t64:amd64. 186s Preparing to unpack .../171-libqt5sql5t64_5.15.17+dfsg-1ubuntu2_amd64.deb ... 186s Unpacking libqt5sql5t64:amd64 (5.15.17+dfsg-1ubuntu2) ... 186s Selecting previously unselected package libqt5help5:amd64. 186s Preparing to unpack .../172-libqt5help5_5.15.17-4_amd64.deb ... 186s Unpacking libqt5help5:amd64 (5.15.17-4) ... 186s Selecting previously unselected package libqt5opengl5t64:amd64. 186s Preparing to unpack .../173-libqt5opengl5t64_5.15.17+dfsg-1ubuntu2_amd64.deb ... 186s Unpacking libqt5opengl5t64:amd64 (5.15.17+dfsg-1ubuntu2) ... 186s Selecting previously unselected package libqt5printsupport5t64:amd64. 186s Preparing to unpack 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package python3-coverage. 187s Preparing to unpack .../206-python3-coverage_7.8.2+dfsg1-1ubuntu1_amd64.deb ... 187s Unpacking python3-coverage (7.8.2+dfsg1-1ubuntu1) ... 187s Selecting previously unselected package python3-cycler. 187s Preparing to unpack .../207-python3-cycler_0.12.1-2_all.deb ... 187s Unpacking python3-cycler (0.12.1-2) ... 187s Selecting previously unselected package python3-debugpy. 187s Preparing to unpack .../208-python3-debugpy_1.8.19+ds-1ubuntu1_amd64.deb ... 187s Unpacking python3-debugpy (1.8.19+ds-1ubuntu1) ... 187s Selecting previously unselected package python3-decorator. 187s Preparing to unpack .../209-python3-decorator_5.2.1-2_all.deb ... 187s Unpacking python3-decorator (5.2.1-2) ... 187s Selecting previously unselected package python3-dicttoxml. 187s Preparing to unpack .../210-python3-dicttoxml_1.7.16-2_all.deb ... 187s Unpacking python3-dicttoxml (1.7.16-2) ... 187s Selecting previously unselected package python3-executing. 187s Preparing to unpack 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unselected package python3-ufolib2. 187s Preparing to unpack .../217-python3-ufolib2_0.18.1+dfsg1-1_all.deb ... 187s Unpacking python3-ufolib2 (0.18.1+dfsg1-1) ... 187s Selecting previously unselected package python3-zopfli. 187s Preparing to unpack .../218-python3-zopfli_0.4.0-1_amd64.deb ... 187s Unpacking python3-zopfli (0.4.0-1) ... 187s Selecting previously unselected package unicode-data. 187s Preparing to unpack .../219-unicode-data_16.0.0-1build1_all.deb ... 187s Unpacking unicode-data (16.0.0-1build1) ... 188s Selecting previously unselected package python3-fonttools. 188s Preparing to unpack .../220-python3-fonttools_4.61.1-3_amd64.deb ... 188s Unpacking python3-fonttools (4.61.1-3) ... 188s Selecting previously unselected package python3-requests-toolbelt. 188s Preparing to unpack .../221-python3-requests-toolbelt_1.0.0-4_all.deb ... 188s Unpacking python3-requests-toolbelt (1.0.0-4) ... 188s Selecting previously unselected package python3-gitlab. 188s Preparing to unpack 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python3-zmq. 188s Preparing to unpack .../238-python3-zmq_27.1.0-1_amd64.deb ... 188s Unpacking python3-zmq (27.1.0-1) ... 188s Selecting previously unselected package python3-jupyter-client. 188s Preparing to unpack .../239-python3-jupyter-client_8.7.0-1_all.deb ... 188s Unpacking python3-jupyter-client (8.7.0-1) ... 188s Selecting previously unselected package python3-nest-asyncio. 188s Preparing to unpack .../240-python3-nest-asyncio_1.6.0-1_all.deb ... 188s Unpacking python3-nest-asyncio (1.6.0-1) ... 188s Selecting previously unselected package python3-ipykernel. 188s Preparing to unpack .../241-python3-ipykernel_6.30.1-1_all.deb ... 188s Unpacking python3-ipykernel (6.30.1-1) ... 188s Selecting previously unselected package python3-kiwisolver. 188s Preparing to unpack .../242-python3-kiwisolver_1.4.10~rc0-1_amd64.deb ... 188s Unpacking python3-kiwisolver (1.4.10~rc0-1) ... 188s Selecting previously unselected package python3-mako. 188s Preparing to unpack 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nxtomomill/utils/tests/test_utils.py::TestAddDarkAtStart::testAddDarkAsDataUrl 250s nxtomomill/utils/tests/test_utils.py::TestAddDarkAtStart::testAddDarkAsDataUrl PASSED [ 90%] 250s nxtomomill/utils/tests/test_utils.py::TestAddDarkAtStart::testAddDarkAsNumpyArray 250s nxtomomill/utils/tests/test_utils.py::TestAddDarkAtStart::testAddDarkAsNumpyArray PASSED [ 91%] 250s nxtomomill/utils/tests/test_utils.py::TestAddFlatAtStart::testAddFlatStartAsDataUrl 250s nxtomomill/utils/tests/test_utils.py::TestAddFlatAtStart::testAddFlatStartAsDataUrl PASSED [ 91%] 250s nxtomomill/utils/tests/test_utils.py::TestAddFlatAtStart::testAddFlatStartAsNumpyArray 250s nxtomomill/utils/tests/test_utils.py::TestAddFlatAtStart::testAddFlatStartAsNumpyArray PASSED [ 92%] 250s nxtomomill/utils/tests/test_utils.py::TestAddFlatAtEnd::testAddFlatEndAsNumpyArray 250s nxtomomill/utils/tests/test_utils.py::TestAddFlatAtEnd::testAddFlatEndAsNumpyArray PASSED [ 92%] 250s nxtomomill/utils/tests/test_utils.py::TestAddFlatAtEnd::testAddFlatStartAsDataUrl 250s nxtomomill/utils/tests/test_utils.py::TestAddFlatAtEnd::testAddFlatStartAsDataUrl PASSED [ 93%] 250s nxtomomill/utils/tests/test_utils.py::TestAddDarkAndFlatWithFancySelection::testInValidSlice PASSED [ 94%] 250s nxtomomill/utils/tests/test_utils.py::TestAddDarkAndFlatWithFancySelection::testValid PASSED [ 94%] 250s nxtomomill/utils/tests/test_utils.py::TestCompleteAddFlatAndDark::testWithExtras PASSED [ 95%] 250s nxtomomill/utils/tests/test_utils.py::TestCompleteAddFlatAndDark::testWithoutExtras PASSED [ 95%] 250s nxtomomill/utils/tests/test_utils.py::TestChangeImageKeyControl::testInputType PASSED [ 96%] 250s nxtomomill/utils/tests/test_utils.py::TestChangeImageKeyControl::testUpdateToAlignment PASSED [ 97%] 250s nxtomomill/utils/tests/test_utils.py::TestChangeImageKeyControl::testUpdateToDark PASSED [ 97%] 250s nxtomomill/utils/tests/test_utils.py::TestChangeImageKeyControl::testUpdateToFlat PASSED [ 98%] 250s nxtomomill/utils/tests/test_utils.py::TestChangeImageKeyControl::testUpdateToInvalid PASSED [ 98%] 250s nxtomomill/utils/tests/test_utils.py::TestChangeImageKeyControl::testUpdateToProjections PASSED [ 99%] 250s nxtomomill/utils/tests/test_utils.py::TestAddDarkAndFlatFromADifferentFolderWithVDS::test PASSED [100%] 250s 250s =============================== warnings summary =============================== 250s ../../../../usr/lib/python3/dist-packages/tomoscan/framereducer/framereducerbase.py:4 250s /usr/lib/python3/dist-packages/tomoscan/framereducer/framereducerbase.py:4: DeprecationWarning: numpy.core.numerictypes is deprecated and has been renamed to numpy._core.numerictypes. The numpy._core namespace contains private NumPy internals and its use is discouraged, as NumPy internals can change without warning in any release. In practice, most real-world usage of numpy.core is to access functionality in the public NumPy API. If that is the case, use the public NumPy API. If not, you are using NumPy internals. If you would still like to access an internal attribute, use numpy._core.numerictypes.generic. 250s from numpy.core.numerictypes import generic as numy_generic 250s 250s nxtomomill/app/tests/test_edf2nx_app.py::test_edf2nx_application 250s /usr/lib/python3/dist-packages/tqdm/std.py:636: TqdmWarning: clamping frac to range [0, 1] 250s full_bar = Bar(frac, 250s 250s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 250s ====== 168 passed, 3 deselected, 2 warnings, 27 subtests passed in 21.90s ====== 251s I: pybuild base:384: cd /tmp/autopkgtest.HNXdn3/autopkgtest_tmp/build; python3.14 -X faulthandler -m pytest -p no:faulthandler -v -k "not test_fluo2nx_application_" 251s ============================= test session starts ============================== 251s platform linux -- Python 3.14.2, pytest-9.0.2, pluggy-1.6.0 -- /usr/bin/python3.14 251s cachedir: .pytest_cache 251s rootdir: /tmp/autopkgtest.HNXdn3/autopkgtest_tmp/build 251s plugins: typeguard-4.4.4 251s collecting ... collected 171 items / 3 deselected / 168 selected 251s 251s nxtomomill/app/tests/test_dxfile2nx_app.py::test_dxfile2nx_application PASSED [ 0%] 251s nxtomomill/app/tests/test_edf2nx_app.py::test_edf2nx_application PASSED [ 1%] 251s nxtomomill/app/tests/test_edf_config_app.py::test_edf_config_application FAILED [ 1%] 251s nxtomomill/app/tests/test_h52nx_app.py::test_h52nx_application PASSED [ 2%] 251s nxtomomill/app/tests/test_h5_config_app.py::test_h5_config_application FAILED [ 2%] 251s nxtomomill/app/tests/test_nx_copy.py::test_nxcopy_get_output_file PASSED [ 3%] 251s nxtomomill/app/tests/test_nx_copy.py::test_copy PASSED [ 4%] 252s nxtomomill/app/tests/test_patch_nx_app.py::test_patch_nx_application PASSED [ 4%] 252s nxtomomill/app/tests/test_split_nxfile_app.py::test_split_nxfile[True] PASSED [ 5%] 252s nxtomomill/app/tests/test_split_nxfile_app.py::test_split_nxfile[False] PASSED [ 5%] 252s 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nxtomomill/utils/tests/test_utils.py::TestAddDarkAtStart::testAddDarkAsDataUrl 273s nxtomomill/utils/tests/test_utils.py::TestAddDarkAtStart::testAddDarkAsDataUrl PASSED [ 90%] 273s nxtomomill/utils/tests/test_utils.py::TestAddDarkAtStart::testAddDarkAsNumpyArray 273s nxtomomill/utils/tests/test_utils.py::TestAddDarkAtStart::testAddDarkAsNumpyArray PASSED [ 91%] 273s nxtomomill/utils/tests/test_utils.py::TestAddFlatAtStart::testAddFlatStartAsDataUrl 273s nxtomomill/utils/tests/test_utils.py::TestAddFlatAtStart::testAddFlatStartAsDataUrl PASSED [ 91%] 273s nxtomomill/utils/tests/test_utils.py::TestAddFlatAtStart::testAddFlatStartAsNumpyArray 273s nxtomomill/utils/tests/test_utils.py::TestAddFlatAtStart::testAddFlatStartAsNumpyArray PASSED [ 92%] 273s nxtomomill/utils/tests/test_utils.py::TestAddFlatAtEnd::testAddFlatEndAsNumpyArray 273s nxtomomill/utils/tests/test_utils.py::TestAddFlatAtEnd::testAddFlatEndAsNumpyArray PASSED [ 92%] 273s nxtomomill/utils/tests/test_utils.py::TestAddFlatAtEnd::testAddFlatStartAsDataUrl 273s nxtomomill/utils/tests/test_utils.py::TestAddFlatAtEnd::testAddFlatStartAsDataUrl PASSED [ 93%] 273s nxtomomill/utils/tests/test_utils.py::TestAddDarkAndFlatWithFancySelection::testInValidSlice PASSED [ 94%] 273s nxtomomill/utils/tests/test_utils.py::TestAddDarkAndFlatWithFancySelection::testValid PASSED [ 94%] 273s nxtomomill/utils/tests/test_utils.py::TestCompleteAddFlatAndDark::testWithExtras PASSED [ 95%] 273s nxtomomill/utils/tests/test_utils.py::TestCompleteAddFlatAndDark::testWithoutExtras PASSED [ 95%] 273s nxtomomill/utils/tests/test_utils.py::TestChangeImageKeyControl::testInputType PASSED [ 96%] 273s nxtomomill/utils/tests/test_utils.py::TestChangeImageKeyControl::testUpdateToAlignment PASSED [ 97%] 273s nxtomomill/utils/tests/test_utils.py::TestChangeImageKeyControl::testUpdateToDark PASSED [ 97%] 273s nxtomomill/utils/tests/test_utils.py::TestChangeImageKeyControl::testUpdateToFlat 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TomoHDF5Config.dict_to_cfg(file_path=options.output_file, dict_=configuration) 273s nxtomomill/io/config/hdf5config.py:1269: in dict_to_cfg 273s return ConfigBase._dict_to_cfg( 273s nxtomomill/io/config/configbase.py:227: in _dict_to_cfg 273s config.write(config_file) 273s /usr/lib/python3.14/configparser.py:975: in write 273s self._write_section(fp, section, 273s /usr/lib/python3.14/configparser.py:983: in _write_section 273s self._validate_key_contents(key) 273s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 273s 273s self = 273s key = '# list of scans to be converted. Frame type should be provided for each scan.\n# Expected format is:\n# * `frame_type...an. \n# * copy (optional): you can provide a different behavior for the this scan (should we duplicate data or not) \n' 273s 273s def _validate_key_contents(self, key): 273s """Raises an InvalidWriteError for any keys containing 273s delimiters or that begins with the section header pattern""" 273s if re.match(self.SECTCRE, key): 273s raise InvalidWriteError( 273s f"Cannot write key {key}; begins with section pattern") 273s for delim in self._delimiters: 273s if delim in key: 273s > raise InvalidWriteError( 273s f"Cannot write key {key}; contains delimiter {delim}") 273s E configparser.InvalidWriteError: Cannot write key # list of scans to be converted. Frame type should be provided for each scan. 273s E # Expected format is: 273s E # * `frame_type` (mandatory): values can be `projection`, `flat`, `dark`, `alignment` or `init`. 273s E # * `entry` (mandatory): DataUrl with path to the scan to integrate. If the scan is contained in the input_file then you can only provide path/name of the scan. 273s E # * copy (optional): you can provide a different behavior for the this scan (should we duplicate data or not) 273s E ; contains delimiter : 273s 273s /usr/lib/python3.14/configparser.py:1227: InvalidWriteError 273s __________________________ test_h5_config_application __________________________ 273s 273s def test_h5_config_application(): 273s """test nxtomomill h5-config output_file""" 273s 273s with tempfile.TemporaryDirectory() as folder: 273s output_file = os.path.join(folder, "config.cfg") 273s assert not os.path.exists(output_file) 273s > main(["h5-config", output_file]) 273s 273s nxtomomill/app/tests/test_h5_config_app.py:15: 273s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 273s nxtomomill/app/h5config.py:64: in main 273s TomoHDF5Config.dict_to_cfg(file_path=options.output_file, dict_=configuration) 273s nxtomomill/io/config/hdf5config.py:1269: in dict_to_cfg 273s return ConfigBase._dict_to_cfg( 273s nxtomomill/io/config/configbase.py:227: in _dict_to_cfg 273s config.write(config_file) 273s /usr/lib/python3.14/configparser.py:975: in write 273s self._write_section(fp, section, 273s /usr/lib/python3.14/configparser.py:983: in _write_section 273s self._validate_key_contents(key) 273s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 273s 273s self = 273s key = '# list of scans to be converted. Frame type should be provided for each scan.\n# Expected format is:\n# * `frame_type...an. \n# * copy (optional): you can provide a different behavior for the this scan (should we duplicate data or not) \n' 273s 273s def _validate_key_contents(self, key): 273s """Raises an InvalidWriteError for any keys containing 273s delimiters or that begins with the section header pattern""" 273s if re.match(self.SECTCRE, key): 273s raise InvalidWriteError( 273s f"Cannot write key {key}; begins with section pattern") 273s for delim in self._delimiters: 273s if delim in key: 273s > raise InvalidWriteError( 273s f"Cannot write key {key}; contains delimiter {delim}") 273s E configparser.InvalidWriteError: Cannot write key # list of scans to be converted. Frame type should be provided for each scan. 273s E # Expected format is: 273s E # * `frame_type` (mandatory): values can be `projection`, `flat`, `dark`, `alignment` or `init`. 273s E # * `entry` (mandatory): DataUrl with path to the scan to integrate. If the scan is contained in the input_file then you can only provide path/name of the scan. 273s E # * copy (optional): you can provide a different behavior for the this scan (should we duplicate data or not) 273s E ; contains delimiter : 273s 273s /usr/lib/python3.14/configparser.py:1227: InvalidWriteError 273s ________________ TestH5Config.test_creation_from_cmd_line_opts _________________ 273s 273s self = 273s 273s def test_creation_from_cmd_line_opts(self): 273s options = _ARParseMock() 273s input_file_path = os.path.join(self.folder, "output_file.cfg") 273s input_config = TomoHDF5Config() 273s > input_config.to_cfg_file(input_file_path) 273s 273s nxtomomill/io/config/tests/test_confighandler.py:112: 273s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 273s nxtomomill/io/config/hdf5config.py:1264: in to_cfg_file 273s self.dict_to_cfg(file_path=file_path, dict_=self.to_dict()) 273s nxtomomill/io/config/hdf5config.py:1269: in dict_to_cfg 273s return ConfigBase._dict_to_cfg( 273s nxtomomill/io/config/configbase.py:227: in _dict_to_cfg 273s config.write(config_file) 273s /usr/lib/python3.14/configparser.py:975: in write 273s self._write_section(fp, section, 273s /usr/lib/python3.14/configparser.py:983: in _write_section 273s self._validate_key_contents(key) 273s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 273s 273s self = 273s key = '# list of scans to be converted. Frame type should be provided for each scan.\n# Expected format is:\n# * `frame_type...an. \n# * copy (optional): you can provide a different behavior for the this scan (should we duplicate data or not) \n' 273s 273s def _validate_key_contents(self, key): 273s """Raises an InvalidWriteError for any keys containing 273s delimiters or that begins with the section header pattern""" 273s if re.match(self.SECTCRE, key): 273s raise InvalidWriteError( 273s f"Cannot write key {key}; begins with section pattern") 273s for delim in self._delimiters: 273s if delim in key: 273s > raise InvalidWriteError( 273s f"Cannot write key {key}; contains delimiter {delim}") 273s E configparser.InvalidWriteError: Cannot write key # list of scans to be converted. Frame type should be provided for each scan. 273s E # Expected format is: 273s E # * `frame_type` (mandatory): values can be `projection`, `flat`, `dark`, `alignment` or `init`. 273s E # * `entry` (mandatory): DataUrl with path to the scan to integrate. If the scan is contained in the input_file then you can only provide path/name of the scan. 273s E # * copy (optional): you can provide a different behavior for the this scan (should we duplicate data or not) 273s E ; contains delimiter : 273s 273s /usr/lib/python3.14/configparser.py:1227: InvalidWriteError 273s _________________ TestH5Config.test_creation_from_config_file __________________ 273s 273s self = 273s 273s def test_creation_from_config_file(self): 273s options = _ARParseMock() 273s with self.assertRaises(ValueError): 273s TomoHDF5ConfigHandler(argparse_options=options) 273s 273s input_file_path = os.path.join(self.folder, "output_file.cfg") 273s input_config = TomoHDF5Config() 273s > input_config.to_cfg_file(input_file_path) 273s 273s nxtomomill/io/config/tests/test_confighandler.py:65: 273s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 273s nxtomomill/io/config/hdf5config.py:1264: in to_cfg_file 273s self.dict_to_cfg(file_path=file_path, dict_=self.to_dict()) 273s nxtomomill/io/config/hdf5config.py:1269: in dict_to_cfg 273s return ConfigBase._dict_to_cfg( 273s nxtomomill/io/config/configbase.py:227: in _dict_to_cfg 273s config.write(config_file) 273s /usr/lib/python3.14/configparser.py:975: in write 273s self._write_section(fp, section, 273s /usr/lib/python3.14/configparser.py:983: in _write_section 273s self._validate_key_contents(key) 273s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 273s 273s self = 273s key = '# list of scans to be converted. Frame type should be provided for each scan.\n# Expected format is:\n# * `frame_type...an. \n# * copy (optional): you can provide a different behavior for the this scan (should we duplicate data or not) \n' 273s 273s def _validate_key_contents(self, key): 273s """Raises an InvalidWriteError for any keys containing 273s delimiters or that begins with the section header pattern""" 273s if re.match(self.SECTCRE, key): 273s raise InvalidWriteError( 273s f"Cannot write key {key}; begins with section pattern") 273s for delim in self._delimiters: 273s if delim in key: 273s > raise InvalidWriteError( 273s f"Cannot write key {key}; contains delimiter {delim}") 273s E configparser.InvalidWriteError: Cannot write key # list of scans to be converted. Frame type should be provided for each scan. 273s E # Expected format is: 273s E # * `frame_type` (mandatory): values can be `projection`, `flat`, `dark`, `alignment` or `init`. 273s E # * `entry` (mandatory): DataUrl with path to the scan to integrate. If the scan is contained in the input_file then you can only provide path/name of the scan. 273s E # * copy (optional): you can provide a different behavior for the this scan (should we duplicate data or not) 273s E ; contains delimiter : 273s 273s /usr/lib/python3.14/configparser.py:1227: InvalidWriteError 273s ______________________ TestFrameUrls.test_external_paths _______________________ 273s 273s self = 273s 273s def test_external_paths(self): 273s """ 273s Check that DataUrl are handled. 273s 273s Warning: this also check data_slices but those are not handled. 273s """ 273s > res_config = self.write_and_read_configuration( 273s ( 273s FrameGroup( 273s frame_type="flat", 273s url="silx:///myfile.h5?path=/entry0000/data/flats", 273s ), 273s FrameGroup( 273s frame_type="dark", 273s url="h5py:///data/file2.hdf5?path=/entry0000/data/darks", 273s ), 273s FrameGroup(frame_type="proj", url="h5py:///data/file3.hdf5?path=/data"), 273s FrameGroup( 273s frame_type="proj", 273s url="silx:///data/file2.hdf5?path=/entry0000/data/projection2&slice=5:100", 273s ), 273s FrameGroup( 273s frame_type="alignment", 273s url="silx:///myfile.h5?path=/entry0000/data/alignment&slice=5", 273s ), 273s ) 273s ) 273s 273s nxtomomill/io/config/tests/test_confighandler.py:196: 273s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 273s nxtomomill/io/config/tests/test_confighandler.py:138: in write_and_read_configuration 273s TomoHDF5Config.dict_to_cfg(file_path=file_path, dict_=configuration) 273s nxtomomill/io/config/hdf5config.py:1269: in dict_to_cfg 273s return ConfigBase._dict_to_cfg( 273s nxtomomill/io/config/configbase.py:227: in _dict_to_cfg 273s config.write(config_file) 273s /usr/lib/python3.14/configparser.py:975: in write 273s self._write_section(fp, section, 273s /usr/lib/python3.14/configparser.py:983: in _write_section 273s self._validate_key_contents(key) 273s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 273s 273s self = 273s key = '# list of scans to be converted. Frame type should be provided for each scan.\n# Expected format is:\n# * `frame_type...an. \n# * copy (optional): you can provide a different behavior for the this scan (should we duplicate data or not) \n' 273s 273s def _validate_key_contents(self, key): 273s """Raises an InvalidWriteError for any keys containing 273s delimiters or that begins with the section header pattern""" 273s if re.match(self.SECTCRE, key): 273s raise InvalidWriteError( 273s f"Cannot write key {key}; begins with section pattern") 273s for delim in self._delimiters: 273s if delim in key: 273s > raise InvalidWriteError( 273s f"Cannot write key {key}; contains delimiter {delim}") 273s E configparser.InvalidWriteError: Cannot write key # list of scans to be converted. Frame type should be provided for each scan. 273s E # Expected format is: 273s E # * `frame_type` (mandatory): values can be `projection`, `flat`, `dark`, `alignment` or `init`. 273s E # * `entry` (mandatory): DataUrl with path to the scan to integrate. If the scan is contained in the input_file then you can only provide path/name of the scan. 273s E # * copy (optional): you can provide a different behavior for the this scan (should we duplicate data or not) 273s E ; contains delimiter : 273s 273s /usr/lib/python3.14/configparser.py:1227: InvalidWriteError 273s ________________________ TestFrameUrls.test_local_paths ________________________ 273s 273s self = 273s 273s def test_local_paths(self): 273s # TODO: test all option to read / write the configuration 273s > res_config = self.write_and_read_configuration( 273s ( 273s FrameGroup(url="/entry0000/data/flats", frame_type="flat"), 273s FrameGroup(url="/entry0000/data/projection1", frame_type="projection"), 273s FrameGroup(url="/entry0000/data/projection2", frame_type="projection"), 273s FrameGroup(url="/entry0000/data/alignment1", frame_type="alignment"), 273s FrameGroup(url="/entry0000/data/alignment2", frame_type="alignment"), 273s FrameGroup(url="/entry0000/data/darks", frame_type="dark"), 273s ) 273s ) 273s 273s nxtomomill/io/config/tests/test_confighandler.py:149: 273s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 273s nxtomomill/io/config/tests/test_confighandler.py:138: in write_and_read_configuration 273s TomoHDF5Config.dict_to_cfg(file_path=file_path, dict_=configuration) 273s nxtomomill/io/config/hdf5config.py:1269: in dict_to_cfg 273s return ConfigBase._dict_to_cfg( 273s nxtomomill/io/config/configbase.py:227: in _dict_to_cfg 273s config.write(config_file) 273s /usr/lib/python3.14/configparser.py:975: in write 273s self._write_section(fp, section, 273s /usr/lib/python3.14/configparser.py:983: in _write_section 273s self._validate_key_contents(key) 273s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 273s 273s self = 273s key = '# list of scans to be converted. Frame type should be provided for each scan.\n# Expected format is:\n# * `frame_type...an. \n# * copy (optional): you can provide a different behavior for the this scan (should we duplicate data or not) \n' 273s 273s def _validate_key_contents(self, key): 273s """Raises an InvalidWriteError for any keys containing 273s delimiters or that begins with the section header pattern""" 273s if re.match(self.SECTCRE, key): 273s raise InvalidWriteError( 273s f"Cannot write key {key}; begins with section pattern") 273s for delim in self._delimiters: 273s if delim in key: 273s > raise InvalidWriteError( 273s f"Cannot write key {key}; contains delimiter {delim}") 273s E configparser.InvalidWriteError: Cannot write key # list of scans to be converted. Frame type should be provided for each scan. 273s E # Expected format is: 273s E # * `frame_type` (mandatory): values can be `projection`, `flat`, `dark`, `alignment` or `init`. 273s E # * `entry` (mandatory): DataUrl with path to the scan to integrate. If the scan is contained in the input_file then you can only provide path/name of the scan. 273s E # * copy (optional): you can provide a different behavior for the this scan (should we duplicate data or not) 273s E ; contains delimiter : 273s 273s /usr/lib/python3.14/configparser.py:1227: InvalidWriteError 273s __________________________ test_TomoEDFConfig_to_dict __________________________ 273s 273s def test_TomoEDFConfig_to_dict(): 273s """Test processing of the to_dict""" 273s config = TomoEDFConfig() 273s 273s config_dict = config.to_dict() 273s for key in ( 273s TomoEDFConfig.GENERAL_SECTION_DK, 273s TomoEDFConfig.EDF_KEYS_SECTION_DK, 273s TomoEDFConfig.FLAT_DARK_SECTION_DK, 273s TomoEDFConfig.UNIT_SECTION_DK, 273s TomoEDFConfig.SAMPLE_SECTION_DK, 273s TomoEDFConfig.SOURCE_SECTION_DK, 273s TomoEDFConfig.DETECTOR_SECTION_DK, 273s ): 273s assert key in config_dict 273s 273s TomoEDFConfig.from_dict(config_dict) 273s 273s with TemporaryDirectory() as folder: 273s file_path = os.path.join(folder, "config.cfg") 273s assert not os.path.exists(file_path) 273s > config.to_cfg_file(file_path) 273s 273s nxtomomill/io/config/tests/test_edf_config.py:37: 273s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 273s nxtomomill/io/config/edfconfig.py:1072: in to_cfg_file 273s self.dict_to_cfg(file_path=file_path, dict_=self.to_dict()) 273s nxtomomill/io/config/edfconfig.py:1077: in dict_to_cfg 273s return ConfigBase._dict_to_cfg( 273s nxtomomill/io/config/configbase.py:227: in _dict_to_cfg 273s config.write(config_file) 273s /usr/lib/python3.14/configparser.py:975: in write 273s self._write_section(fp, section, 273s /usr/lib/python3.14/configparser.py:983: in _write_section 273s self._validate_key_contents(key) 273s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 273s 273s self = 273s key = "# Once the conversion is done some checks can be done to check the validity of the conversion. Expected as a list of elements. Possibles tests are: 'compare-output-volume'" 273s 273s def _validate_key_contents(self, key): 273s """Raises an InvalidWriteError for any keys containing 273s delimiters or that begins with the section header pattern""" 273s if re.match(self.SECTCRE, key): 273s raise InvalidWriteError( 273s f"Cannot write key {key}; begins with section pattern") 273s for delim in self._delimiters: 273s if delim in key: 273s > raise InvalidWriteError( 273s f"Cannot write key {key}; contains delimiter {delim}") 273s E configparser.InvalidWriteError: Cannot write key # Once the conversion is done some checks can be done to check the validity of the conversion. Expected as a list of elements. Possibles tests are: 'compare-output-volume'; contains delimiter : 273s 273s /usr/lib/python3.14/configparser.py:1227: InvalidWriteError 273s ------------------------------ Captured log call ------------------------------- 273s WARNING silx.DEPRECATION:deprecation.py:136 Function from_value is deprecated since silx version 2.1.1. Use 'Enum(value)' instead. 273s File "/tmp/autopkgtest.HNXdn3/autopkgtest_tmp/build/nxtomomill/io/config/edfconfig.py", line 721, in to_dict 273s level = OptionLevel.from_value(level) 273s WARNING silx.DEPRECATION:deprecation.py:136 Function from_value is deprecated since silx version 2.1.1. Use 'Enum(value)' instead. 273s File "/tmp/autopkgtest.HNXdn3/autopkgtest_tmp/build/nxtomomill/io/config/configbase.py", line 120, in file_extension 273s self._file_extension = FileExtension.from_value(file_extension) 273s WARNING silx.DEPRECATION:deprecation.py:136 Function from_value is deprecated since silx version 2.1.1. Use 'Enum(value)' instead. 273s File "/tmp/autopkgtest.HNXdn3/autopkgtest_tmp/build/nxtomomill/io/config/edfconfig.py", line 702, in source_type 273s self._source_type = SourceType.from_value(source_type) 273s WARNING silx.DEPRECATION:deprecation.py:136 Function from_value is deprecated since silx version 2.1.1. Use 'Enum(value)' instead. 273s File "/tmp/autopkgtest.HNXdn3/autopkgtest_tmp/build/nxtomomill/io/config/edfconfig.py", line 717, in source_probe 273s self._source_probe = ProbeType.from_value(source_probe) 273s ______________________ test_TomoEDFConfig_default_config _______________________ 273s 273s def test_TomoEDFConfig_default_config(): 273s """insure default configuration generation works""" 273s with TemporaryDirectory() as folder: 273s file_path = os.path.join(folder, "config.cfg") 273s assert not os.path.exists(file_path) 273s config = generate_default_edf_config() 273s assert isinstance(config, dict) 273s > TomoEDFConfig.from_dict(config).to_cfg_file(file_path=file_path) 273s 273s nxtomomill/io/config/tests/test_edf_config.py:51: 273s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 273s nxtomomill/io/config/edfconfig.py:1072: in to_cfg_file 273s self.dict_to_cfg(file_path=file_path, dict_=self.to_dict()) 273s nxtomomill/io/config/edfconfig.py:1077: in dict_to_cfg 273s return ConfigBase._dict_to_cfg( 273s nxtomomill/io/config/configbase.py:227: in _dict_to_cfg 273s config.write(config_file) 273s /usr/lib/python3.14/configparser.py:975: in write 273s self._write_section(fp, section, 273s /usr/lib/python3.14/configparser.py:983: in _write_section 273s self._validate_key_contents(key) 273s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 273s 273s self = 273s key = "# Once the conversion is done some checks can be done to check the validity of the conversion. Expected as a list of elements. Possibles tests are: 'compare-output-volume'" 273s 273s def _validate_key_contents(self, key): 273s """Raises an InvalidWriteError for any keys containing 273s delimiters or that begins with the section header pattern""" 273s if re.match(self.SECTCRE, key): 273s raise InvalidWriteError( 273s f"Cannot write key {key}; begins with section pattern") 273s for delim in self._delimiters: 273s if delim in key: 273s > raise InvalidWriteError( 273s f"Cannot write key {key}; contains delimiter {delim}") 273s E configparser.InvalidWriteError: Cannot write key # Once the conversion is done some checks can be done to check the validity of the conversion. Expected as a list of elements. Possibles tests are: 'compare-output-volume'; contains delimiter : 273s 273s /usr/lib/python3.14/configparser.py:1227: InvalidWriteError 273s _________________________ test_TomoFluoConfig_to_dict __________________________ 273s 273s tmp_path = PosixPath('/tmp/pytest-of-ubuntu/pytest-1/test_TomoFluoConfig_to_dict0') 273s 273s def test_TomoFluoConfig_to_dict(tmp_path): 273s """Test processing of the to_dict""" 273s config = TomoFluoConfig() 273s 273s config_dict = config.to_dict() 273s for key in ( 273s TomoFluoConfig.GENERAL_SECTION_DK, 273s TomoFluoConfig.SOURCE_SECTION_DK, 273s ): 273s assert key in config_dict 273s 273s TomoFluoConfig.from_dict(config_dict) 273s 273s file_path = os.path.join(tmp_path, "config.cfg") 273s assert not os.path.exists(file_path) 273s > config.to_cfg_file(file_path) 273s 273s nxtomomill/io/config/tests/test_fluo_config.py:27: 273s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 273s nxtomomill/io/config/fluoconfig.py:403: in to_cfg_file 273s self.dict_to_cfg(file_path=file_path, dict_=self.to_dict()) 273s nxtomomill/io/config/fluoconfig.py:408: in dict_to_cfg 273s return ConfigBase._dict_to_cfg( 273s nxtomomill/io/config/configbase.py:227: in _dict_to_cfg 273s config.write(config_file) 273s /usr/lib/python3.14/configparser.py:975: in write 273s self._write_section(fp, section, 273s /usr/lib/python3.14/configparser.py:983: in _write_section 273s self._validate_key_contents(key) 273s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 273s 273s self = 273s key = '# If False then will create embed all the data into a single file avoiding external link to other file. If True then ...working directory. See external link resolution details: https://docs.hdfgroup.org/hdf5/v1_12/group___h5_l.html#title5' 273s 273s def _validate_key_contents(self, key): 273s """Raises an InvalidWriteError for any keys containing 273s delimiters or that begins with the section header pattern""" 273s if re.match(self.SECTCRE, key): 273s raise InvalidWriteError( 273s f"Cannot write key {key}; begins with section pattern") 273s for delim in self._delimiters: 273s if delim in key: 273s > raise InvalidWriteError( 273s f"Cannot write key {key}; contains delimiter {delim}") 273s E configparser.InvalidWriteError: Cannot write key # If False then will create embed all the data into a single file avoiding external link to other file. If True then the decetor data will point to original tif files. In this case you must be carreful to keep relative paths valid. Warning: to read external dataset you nust be at the hdf5 file working directory. See external link resolution details: https://docs.hdfgroup.org/hdf5/v1_12/group___h5_l.html#title5; contains delimiter : 273s 273s /usr/lib/python3.14/configparser.py:1227: InvalidWriteError 273s ------------------------------ Captured log call ------------------------------- 273s WARNING silx.DEPRECATION:deprecation.py:136 Function from_value is deprecated since silx version 2.1.1. Use 'Enum(value)' instead. 273s File "/tmp/autopkgtest.HNXdn3/autopkgtest_tmp/build/nxtomomill/io/config/fluoconfig.py", line 279, in to_dict 273s level = OptionLevel.from_value(level) 273s WARNING silx.DEPRECATION:deprecation.py:136 Function from_value is deprecated since silx version 2.1.1. Use 'Enum(value)' instead. 273s File "/tmp/autopkgtest.HNXdn3/autopkgtest_tmp/build/nxtomomill/io/config/fluoconfig.py", line 197, in external_path_type 273s self._external_path_type = PathType.from_value(path_type) 273s WARNING silx.DEPRECATION:deprecation.py:136 Function from_value is deprecated since silx version 2.1.1. Use 'Enum(value)' instead. 273s File "/tmp/autopkgtest.HNXdn3/autopkgtest_tmp/build/nxtomomill/io/config/fluoconfig.py", line 260, in source_type 273s self._source_type = SourceType.from_value(source_type) 273s WARNING silx.DEPRECATION:deprecation.py:136 Function from_value is deprecated since silx version 2.1.1. Use 'Enum(value)' instead. 273s File "/tmp/autopkgtest.HNXdn3/autopkgtest_tmp/build/nxtomomill/io/config/fluoconfig.py", line 275, in source_probe 273s self._source_probe = ProbeType.from_value(source_probe) 273s ______________________ test_TomoFluoConfig_default_config ______________________ 273s 273s tmp_path = PosixPath('/tmp/pytest-of-ubuntu/pytest-1/test_TomoFluoConfig_default_co0') 273s 273s def test_TomoFluoConfig_default_config(tmp_path): 273s """insure default configuration generation works""" 273s file_path = os.path.join(tmp_path, "config.cfg") 273s assert not os.path.exists(file_path) 273s config = generate_default_fluo_config() 273s assert isinstance(config, dict) 273s > TomoFluoConfig.from_dict(config).to_cfg_file(file_path=file_path) 273s 273s nxtomomill/io/config/tests/test_fluo_config.py:40: 273s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 273s nxtomomill/io/config/fluoconfig.py:403: in to_cfg_file 273s self.dict_to_cfg(file_path=file_path, dict_=self.to_dict()) 273s nxtomomill/io/config/fluoconfig.py:408: in dict_to_cfg 273s return ConfigBase._dict_to_cfg( 273s nxtomomill/io/config/configbase.py:227: in _dict_to_cfg 273s config.write(config_file) 273s /usr/lib/python3.14/configparser.py:975: in write 273s self._write_section(fp, section, 273s /usr/lib/python3.14/configparser.py:983: in _write_section 273s self._validate_key_contents(key) 273s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 273s 273s self = 273s key = '# If False then will create embed all the data into a single file avoiding external link to other file. If True then ...working directory. See external link resolution details: https://docs.hdfgroup.org/hdf5/v1_12/group___h5_l.html#title5' 273s 273s def _validate_key_contents(self, key): 273s """Raises an InvalidWriteError for any keys containing 273s delimiters or that begins with the section header pattern""" 273s if re.match(self.SECTCRE, key): 273s raise InvalidWriteError( 273s f"Cannot write key {key}; begins with section pattern") 273s for delim in self._delimiters: 273s if delim in key: 273s > raise InvalidWriteError( 273s f"Cannot write key {key}; contains delimiter {delim}") 273s E configparser.InvalidWriteError: Cannot write key # If False then will create embed all the data into a single file avoiding external link to other file. If True then the decetor data will point to original tif files. In this case you must be carreful to keep relative paths valid. Warning: to read external dataset you nust be at the hdf5 file working directory. See external link resolution details: https://docs.hdfgroup.org/hdf5/v1_12/group___h5_l.html#title5; contains delimiter : 273s 273s /usr/lib/python3.14/configparser.py:1227: InvalidWriteError 273s ____________________ TestH5Config.test_to_and_from_cfg_file ____________________ 273s 273s self = 273s 273s def test_to_and_from_cfg_file(self): 273s """ 274s Insure we can dump the configuration to a .cfg file and that we 274s can read it back 274s """ 274s file_path = os.path.join(self.folder, "output_file.cfg") 274s input_config = TomoHDF5Config() 274s > input_config.to_cfg_file(file_path) 274s 274s nxtomomill/io/config/tests/test_hdf5_config.py:208: 274s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 274s nxtomomill/io/config/hdf5config.py:1264: in to_cfg_file 274s self.dict_to_cfg(file_path=file_path, dict_=self.to_dict()) 274s nxtomomill/io/config/hdf5config.py:1269: in dict_to_cfg 274s return ConfigBase._dict_to_cfg( 274s nxtomomill/io/config/configbase.py:227: in _dict_to_cfg 274s config.write(config_file) 274s /usr/lib/python3.14/configparser.py:975: in write 274s self._write_section(fp, section, 274s /usr/lib/python3.14/configparser.py:983: in _write_section 274s self._validate_key_contents(key) 274s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 274s 274s self = 274s key = '# list of scans to be converted. Frame type should be provided for each scan.\n# Expected format is:\n# * `frame_type...an. \n# * copy (optional): you can provide a different behavior for the this scan (should we duplicate data or not) \n' 274s 274s def _validate_key_contents(self, key): 274s """Raises an InvalidWriteError for any keys containing 274s delimiters or that begins with the section header pattern""" 274s if re.match(self.SECTCRE, key): 274s raise InvalidWriteError( 274s f"Cannot write key {key}; begins with section pattern") 274s for delim in self._delimiters: 274s if delim in key: 274s > raise InvalidWriteError( 274s f"Cannot write key {key}; contains delimiter {delim}") 274s E configparser.InvalidWriteError: Cannot write key # list of scans to be converted. Frame type should be provided for each scan. 274s E # Expected format is: 274s E # * `frame_type` (mandatory): values can be `projection`, `flat`, `dark`, `alignment` or `init`. 274s E # * `entry` (mandatory): DataUrl with path to the scan to integrate. If the scan is contained in the input_file then you can only provide path/name of the scan. 274s E # * copy (optional): you can provide a different behavior for the this scan (should we duplicate data or not) 274s E ; contains delimiter : 274s 274s /usr/lib/python3.14/configparser.py:1227: InvalidWriteError 274s =============================== warnings summary =============================== 274s ../../../../usr/lib/python3/dist-packages/tomoscan/framereducer/framereducerbase.py:4 274s /usr/lib/python3/dist-packages/tomoscan/framereducer/framereducerbase.py:4: DeprecationWarning: numpy.core.numerictypes is deprecated and has been renamed to numpy._core.numerictypes. The numpy._core namespace contains private NumPy internals and its use is discouraged, as NumPy internals can change without warning in any release. In practice, most real-world usage of numpy.core is to access functionality in the public NumPy API. If that is the case, use the public NumPy API. If not, you are using NumPy internals. If you would still like to access an internal attribute, use numpy._core.numerictypes.generic. 274s from numpy.core.numerictypes import generic as numy_generic 274s 274s nxtomomill/app/tests/test_edf2nx_app.py::test_edf2nx_application 274s /usr/lib/python3/dist-packages/tqdm/std.py:636: TqdmWarning: clamping frac to range [0, 1] 274s full_bar = Bar(frac, 274s 274s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 274s =========================== short test summary info ============================ 274s FAILED nxtomomill/app/tests/test_edf_config_app.py::test_edf_config_application 274s FAILED nxtomomill/app/tests/test_h5_config_app.py::test_h5_config_application 274s FAILED nxtomomill/io/config/tests/test_confighandler.py::TestH5Config::test_creation_from_cmd_line_opts 274s FAILED nxtomomill/io/config/tests/test_confighandler.py::TestH5Config::test_creation_from_config_file 274s FAILED nxtomomill/io/config/tests/test_confighandler.py::TestFrameUrls::test_external_paths 274s FAILED nxtomomill/io/config/tests/test_confighandler.py::TestFrameUrls::test_local_paths 274s FAILED nxtomomill/io/config/tests/test_edf_config.py::test_TomoEDFConfig_to_dict 274s FAILED nxtomomill/io/config/tests/test_edf_config.py::test_TomoEDFConfig_default_config 274s FAILED nxtomomill/io/config/tests/test_fluo_config.py::test_TomoFluoConfig_to_dict 274s FAILED nxtomomill/io/config/tests/test_fluo_config.py::test_TomoFluoConfig_default_config 274s FAILED nxtomomill/io/config/tests/test_hdf5_config.py::TestH5Config::test_to_and_from_cfg_file 274s = 11 failed, 157 passed, 3 deselected, 2 warnings, 27 subtests passed in 22.63s = 274s E: pybuild pybuild:483: test: plugin pyproject failed with: exit code=1: cd /tmp/autopkgtest.HNXdn3/autopkgtest_tmp/build; {interpreter} -X faulthandler -m pytest -p no:faulthandler -v -k "not test_fluo2nx_application_" 274s pybuild-autopkgtest: error: pybuild --autopkgtest -i python{version} -p "3.13 3.14" returned exit code 13 274s make: *** [/tmp/Md7CLRgmUI/run:4: pybuild-autopkgtest] Error 25 274s pybuild-autopkgtest: error: /tmp/Md7CLRgmUI/run pybuild-autopkgtest returned exit code 2 274s autopkgtest [16:44:24]: test pybuild-autopkgtest: -----------------------] 274s pybuild-autopkgtest FAIL non-zero exit status 25 274s autopkgtest [16:44:24]: test pybuild-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 275s autopkgtest [16:44:25]: @@@@@@@@@@@@@@@@@@@@ summary 275s pybuild-autopkgtest FAIL non-zero exit status 25