0s autopkgtest [10:30:51]: starting date and time: 2025-11-17 10:30:51+0000 0s autopkgtest [10:30:51]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [10:30:51]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.4tg7nnjd/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:numpy,src:python3-defaults --apt-upgrade python-loompy --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=numpy/1:2.3.4+ds-3ubuntu1 python3-defaults/3.13.7-2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-amd64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@sto01-5.secgroup --name adt-resolute-amd64-python-loompy-20251117-103051-juju-7f2275-prod-proposed-migration-environment-2-90f8899a-f877-40e2-95c5-382e8bc2f80a --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-autopkgtest-workers-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 5s Creating nova instance adt-resolute-amd64-python-loompy-20251117-103051-juju-7f2275-prod-proposed-migration-environment-2-90f8899a-f877-40e2-95c5-382e8bc2f80a from image adt/ubuntu-resolute-amd64-server-20251117.img (UUID 9762b0cc-7c5b-4854-acd5-cc74ad0de8c6)... 43s autopkgtest [10:31:34]: testbed dpkg architecture: amd64 43s autopkgtest [10:31:34]: testbed apt version: 3.1.11 43s autopkgtest [10:31:34]: @@@@@@@@@@@@@@@@@@@@ test bed setup 43s autopkgtest [10:31:34]: testbed release detected to be: None 44s autopkgtest [10:31:35]: updating testbed package index (apt update) 44s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [87.8 kB] 44s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 44s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 44s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 44s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [80.3 kB] 44s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [881 kB] 45s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [22.9 kB] 45s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [9848 B] 45s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [158 kB] 45s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [118 kB] 45s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [3128 B] 45s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted i386 Packages [3744 B] 45s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 Packages [64.6 kB] 45s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [336 B] 45s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [614 kB] 45s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [282 kB] 45s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [22.2 kB] 45s Get:18 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [13.4 kB] 45s Get:19 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [6516 B] 45s Get:20 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [680 B] 47s Fetched 2367 kB in 1s (2266 kB/s) 48s Reading package lists... 49s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 49s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 49s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 49s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 49s Reading package lists... 49s Reading package lists... 49s Building dependency tree... 49s Reading state information... 49s Calculating upgrade... 50s The following packages will be upgraded: 50s libpython3-stdlib python3 python3-minimal usbutils 50s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 50s Need to get 146 kB of archives. 50s After this operation, 0 B of additional disk space will be used. 50s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-minimal amd64 3.13.7-2 [27.8 kB] 50s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3 amd64 3.13.7-2 [23.9 kB] 50s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libpython3-stdlib amd64 3.13.7-2 [10.6 kB] 50s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 usbutils amd64 1:019-1 [83.9 kB] 50s dpkg-preconfigure: unable to re-open stdin: No such file or directory 50s Fetched 146 kB in 0s (0 B/s) 50s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83372 files and directories currently installed.) 50s Preparing to unpack .../python3-minimal_3.13.7-2_amd64.deb ... 50s Unpacking python3-minimal (3.13.7-2) over (3.13.7-1) ... 50s Setting up python3-minimal (3.13.7-2) ... 50s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83372 files and directories currently installed.) 50s Preparing to unpack .../python3_3.13.7-2_amd64.deb ... 50s running python pre-rtupdate hooks for python3.13... 50s Unpacking python3 (3.13.7-2) over (3.13.7-1) ... 50s Preparing to unpack .../libpython3-stdlib_3.13.7-2_amd64.deb ... 50s Unpacking libpython3-stdlib:amd64 (3.13.7-2) over (3.13.7-1) ... 50s Preparing to unpack .../usbutils_1%3a019-1_amd64.deb ... 50s Unpacking usbutils (1:019-1) over (1:018-2) ... 50s Setting up usbutils (1:019-1) ... 50s Setting up libpython3-stdlib:amd64 (3.13.7-2) ... 50s Setting up python3 (3.13.7-2) ... 50s running python rtupdate hooks for python3.13... 50s running python post-rtupdate hooks for python3.13... 50s Processing triggers for man-db (2.13.1-1) ... 51s autopkgtest [10:31:42]: upgrading testbed (apt dist-upgrade and autopurge) 51s Reading package lists... 51s Building dependency tree... 51s Reading state information... 52s Calculating upgrade... 52s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 52s Reading package lists... 52s Building dependency tree... 52s Reading state information... 52s Solving dependencies... 52s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 54s autopkgtest [10:31:45]: testbed running kernel: Linux 6.17.0-5-generic #5-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 22 10:00:33 UTC 2025 54s autopkgtest [10:31:45]: @@@@@@@@@@@@@@@@@@@@ apt-source python-loompy 56s Get:1 http://ftpmaster.internal/ubuntu resolute/universe python-loompy 3.0.7+dfsg-4 (dsc) [2506 B] 56s Get:2 http://ftpmaster.internal/ubuntu resolute/universe python-loompy 3.0.7+dfsg-4 (tar) [2266 kB] 56s Get:3 http://ftpmaster.internal/ubuntu resolute/universe python-loompy 3.0.7+dfsg-4 (diff) [6780 B] 56s gpgv: Signature made Sat May 17 17:48:22 2025 UTC 56s gpgv: using RSA key 8F6DE104377F3B11E741748731F3144544A1741A 56s gpgv: issuer "tchet@debian.org" 56s gpgv: Can't check signature: No public key 56s dpkg-source: warning: cannot verify inline signature for ./python-loompy_3.0.7+dfsg-4.dsc: no acceptable signature found 56s autopkgtest [10:31:47]: testing package python-loompy version 3.0.7+dfsg-4 56s autopkgtest [10:31:47]: build not needed 57s autopkgtest [10:31:48]: test run-unit-test: preparing testbed 57s Reading package lists... 58s Building dependency tree... 58s Reading state information... 58s Solving dependencies... 58s The following NEW packages will be installed: 58s libaec0 libblas3 libgfortran5 libgomp1 libhdf5-310 libhdf5-hl-310 libhwloc15 58s liblapack3 liblzf1 libpfm4 libpython3.14-minimal libpython3.14-stdlib libsz2 58s libtbb12 libtbbbind-2-5 libtbbmalloc2 llvm-20 llvm-20-linker-tools 58s llvm-20-runtime python3-all python3-click python3-decorator python3-h5py 58s python3-h5py-serial python3-iniconfig python3-llvmlite python3-loompy 58s python3-numba python3-numpy python3-numpy-dev python3-numpy-groupies 58s python3-pandas python3-pandas-lib python3-pluggy python3-pytest python3-pytz 58s python3-scipy python3.14 python3.14-minimal 58s 0 upgraded, 39 newly installed, 0 to remove and 0 not upgraded. 58s Need to get 102 MB of archives. 58s After this operation, 504 MB of additional disk space will be used. 58s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-numpy-dev amd64 1:2.3.4+ds-3ubuntu1 [147 kB] 58s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7 [259 kB] 58s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 15.2.0-7ubuntu1 [939 kB] 58s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7 [2739 kB] 58s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-numpy amd64 1:2.3.4+ds-3ubuntu1 [8126 kB] 58s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-minimal amd64 3.14.0-4 [906 kB] 58s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.14-minimal amd64 3.14.0-4 [2559 kB] 58s Get:8 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec0 amd64 1.1.4-2 [22.9 kB] 58s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 15.2.0-7ubuntu1 [151 kB] 58s Get:10 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsz2 amd64 1.1.4-2 [5516 B] 58s Get:11 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-310 amd64 1.14.5+repack-4 [1432 kB] 58s Get:12 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-310 amd64 1.14.5+repack-4 [59.8 kB] 58s Get:13 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhwloc15 amd64 2.12.2-1 [181 kB] 58s Get:14 http://ftpmaster.internal/ubuntu resolute/universe amd64 liblzf1 amd64 3.6-4 [7624 B] 58s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-stdlib amd64 3.14.0-4 [2397 kB] 58s Get:16 http://ftpmaster.internal/ubuntu resolute/universe amd64 libtbbbind-2-5 amd64 2022.1.0-3 [14.8 kB] 58s Get:17 http://ftpmaster.internal/ubuntu resolute/universe amd64 libtbbmalloc2 amd64 2022.1.0-3 [53.9 kB] 58s Get:18 http://ftpmaster.internal/ubuntu resolute/universe amd64 libtbb12 amd64 2022.1.0-3 [94.1 kB] 59s Get:19 http://ftpmaster.internal/ubuntu resolute/universe amd64 llvm-20-runtime amd64 1:20.1.8-0ubuntu6 [553 kB] 59s Get:20 http://ftpmaster.internal/ubuntu resolute/universe amd64 llvm-20-linker-tools amd64 1:20.1.8-0ubuntu6 [1331 kB] 59s Get:21 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpfm4 amd64 4.13.0+git106-g3e4031b-1 [438 kB] 59s Get:22 http://ftpmaster.internal/ubuntu resolute/universe amd64 llvm-20 amd64 1:20.1.8-0ubuntu6 [19.6 MB] 59s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.14 amd64 3.14.0-4 [805 kB] 59s Get:24 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-all amd64 3.13.7-2 [890 B] 59s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-click all 8.2.0+0.really.8.1.8-1 [80.0 kB] 59s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-decorator all 5.2.1-2 [28.1 kB] 59s Get:27 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5py-serial amd64 3.13.0-1ubuntu1 [1184 kB] 59s Get:28 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5py all 3.13.0-1ubuntu1 [8230 B] 59s Get:29 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-iniconfig all 2.1.0-1 [6840 B] 59s Get:30 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-llvmlite amd64 0.45.1-0ubuntu2 [24.4 MB] 59s Get:31 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-scipy amd64 1.15.3-1ubuntu1 [20.3 MB] 60s Get:32 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-numba amd64 0.61.2+dfsg-1 [1811 kB] 60s Get:33 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-numpy-groupies all 0.10.2-2 [32.1 kB] 60s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-pytz all 2025.2-4 [32.3 kB] 60s Get:35 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pandas-lib amd64 2.3.3+dfsg-1ubuntu1 [7668 kB] 60s Get:36 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pandas all 2.3.3+dfsg-1ubuntu1 [2948 kB] 60s Get:37 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-loompy amd64 3.0.7+dfsg-4 [41.7 kB] 60s Get:38 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pluggy all 1.6.0-1 [21.0 kB] 60s Get:39 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pytest all 8.3.5-2 [252 kB] 60s Fetched 102 MB in 2s (46.3 MB/s) 60s Selecting previously unselected package python3-numpy-dev:amd64. 60s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83372 files and directories currently installed.) 60s Preparing to unpack .../00-python3-numpy-dev_1%3a2.3.4+ds-3ubuntu1_amd64.deb ... 60s Unpacking python3-numpy-dev:amd64 (1:2.3.4+ds-3ubuntu1) ... 60s Selecting previously unselected package libblas3:amd64. 60s Preparing to unpack .../01-libblas3_3.12.1-7_amd64.deb ... 60s Unpacking libblas3:amd64 (3.12.1-7) ... 60s Selecting previously unselected package libgfortran5:amd64. 60s Preparing to unpack .../02-libgfortran5_15.2.0-7ubuntu1_amd64.deb ... 60s Unpacking libgfortran5:amd64 (15.2.0-7ubuntu1) ... 60s Selecting previously unselected package liblapack3:amd64. 60s Preparing to unpack .../03-liblapack3_3.12.1-7_amd64.deb ... 60s Unpacking liblapack3:amd64 (3.12.1-7) ... 60s Selecting previously unselected package python3-numpy. 60s Preparing to unpack .../04-python3-numpy_1%3a2.3.4+ds-3ubuntu1_amd64.deb ... 60s Unpacking python3-numpy (1:2.3.4+ds-3ubuntu1) ... 60s Selecting previously unselected package libpython3.14-minimal:amd64. 60s Preparing to unpack .../05-libpython3.14-minimal_3.14.0-4_amd64.deb ... 60s Unpacking libpython3.14-minimal:amd64 (3.14.0-4) ... 60s Selecting previously unselected package python3.14-minimal. 60s Preparing to unpack .../06-python3.14-minimal_3.14.0-4_amd64.deb ... 60s Unpacking python3.14-minimal (3.14.0-4) ... 60s Selecting previously unselected package libaec0:amd64. 60s Preparing to unpack .../07-libaec0_1.1.4-2_amd64.deb ... 60s Unpacking libaec0:amd64 (1.1.4-2) ... 60s Selecting previously unselected package libgomp1:amd64. 60s Preparing to unpack .../08-libgomp1_15.2.0-7ubuntu1_amd64.deb ... 60s Unpacking libgomp1:amd64 (15.2.0-7ubuntu1) ... 61s Selecting previously unselected package libsz2:amd64. 61s Preparing to unpack .../09-libsz2_1.1.4-2_amd64.deb ... 61s Unpacking libsz2:amd64 (1.1.4-2) ... 61s Selecting previously unselected package libhdf5-310:amd64. 61s Preparing to unpack .../10-libhdf5-310_1.14.5+repack-4_amd64.deb ... 61s Unpacking libhdf5-310:amd64 (1.14.5+repack-4) ... 61s Selecting previously unselected package libhdf5-hl-310:amd64. 61s Preparing to unpack .../11-libhdf5-hl-310_1.14.5+repack-4_amd64.deb ... 61s Unpacking libhdf5-hl-310:amd64 (1.14.5+repack-4) ... 61s Selecting previously unselected package libhwloc15:amd64. 61s Preparing to unpack .../12-libhwloc15_2.12.2-1_amd64.deb ... 61s Unpacking libhwloc15:amd64 (2.12.2-1) ... 61s Selecting previously unselected package liblzf1:amd64. 61s Preparing to unpack .../13-liblzf1_3.6-4_amd64.deb ... 61s Unpacking liblzf1:amd64 (3.6-4) ... 61s Selecting previously unselected package libpython3.14-stdlib:amd64. 61s Preparing to unpack .../14-libpython3.14-stdlib_3.14.0-4_amd64.deb ... 61s Unpacking libpython3.14-stdlib:amd64 (3.14.0-4) ... 61s Selecting previously unselected package libtbbbind-2-5:amd64. 61s Preparing to unpack .../15-libtbbbind-2-5_2022.1.0-3_amd64.deb ... 61s Unpacking libtbbbind-2-5:amd64 (2022.1.0-3) ... 61s Selecting previously unselected package libtbbmalloc2:amd64. 61s Preparing to unpack .../16-libtbbmalloc2_2022.1.0-3_amd64.deb ... 61s Unpacking libtbbmalloc2:amd64 (2022.1.0-3) ... 61s Selecting previously unselected package libtbb12:amd64. 61s Preparing to unpack .../17-libtbb12_2022.1.0-3_amd64.deb ... 61s Unpacking libtbb12:amd64 (2022.1.0-3) ... 61s Selecting previously unselected package llvm-20-runtime. 61s Preparing to unpack .../18-llvm-20-runtime_1%3a20.1.8-0ubuntu6_amd64.deb ... 61s Unpacking llvm-20-runtime (1:20.1.8-0ubuntu6) ... 61s Selecting previously unselected package llvm-20-linker-tools. 61s Preparing to unpack .../19-llvm-20-linker-tools_1%3a20.1.8-0ubuntu6_amd64.deb ... 61s Unpacking llvm-20-linker-tools (1:20.1.8-0ubuntu6) ... 61s Selecting previously unselected package libpfm4:amd64. 61s Preparing to unpack .../20-libpfm4_4.13.0+git106-g3e4031b-1_amd64.deb ... 61s Unpacking libpfm4:amd64 (4.13.0+git106-g3e4031b-1) ... 61s Selecting previously unselected package llvm-20. 61s Preparing to unpack .../21-llvm-20_1%3a20.1.8-0ubuntu6_amd64.deb ... 61s Unpacking llvm-20 (1:20.1.8-0ubuntu6) ... 61s Selecting previously unselected package python3.14. 61s Preparing to unpack .../22-python3.14_3.14.0-4_amd64.deb ... 61s Unpacking python3.14 (3.14.0-4) ... 61s Selecting previously unselected package python3-all. 61s Preparing to unpack .../23-python3-all_3.13.7-2_amd64.deb ... 61s Unpacking python3-all (3.13.7-2) ... 61s Selecting previously unselected package python3-click. 61s Preparing to unpack .../24-python3-click_8.2.0+0.really.8.1.8-1_all.deb ... 61s Unpacking python3-click (8.2.0+0.really.8.1.8-1) ... 61s Selecting previously unselected package python3-decorator. 61s Preparing to unpack .../25-python3-decorator_5.2.1-2_all.deb ... 61s Unpacking python3-decorator (5.2.1-2) ... 61s Selecting previously unselected package python3-h5py-serial. 61s Preparing to unpack .../26-python3-h5py-serial_3.13.0-1ubuntu1_amd64.deb ... 61s Unpacking python3-h5py-serial (3.13.0-1ubuntu1) ... 61s Selecting previously unselected package python3-h5py. 61s Preparing to unpack .../27-python3-h5py_3.13.0-1ubuntu1_all.deb ... 61s Unpacking python3-h5py (3.13.0-1ubuntu1) ... 61s Selecting previously unselected package python3-iniconfig. 61s Preparing to unpack .../28-python3-iniconfig_2.1.0-1_all.deb ... 61s Unpacking python3-iniconfig (2.1.0-1) ... 61s Selecting previously unselected package python3-llvmlite. 61s Preparing to unpack .../29-python3-llvmlite_0.45.1-0ubuntu2_amd64.deb ... 61s Unpacking python3-llvmlite (0.45.1-0ubuntu2) ... 61s Selecting previously unselected package python3-scipy. 61s Preparing to unpack .../30-python3-scipy_1.15.3-1ubuntu1_amd64.deb ... 61s Unpacking python3-scipy (1.15.3-1ubuntu1) ... 62s Selecting previously unselected package python3-numba. 62s Preparing to unpack .../31-python3-numba_0.61.2+dfsg-1_amd64.deb ... 62s Unpacking python3-numba (0.61.2+dfsg-1) ... 62s Selecting previously unselected package python3-numpy-groupies. 62s Preparing to unpack .../32-python3-numpy-groupies_0.10.2-2_all.deb ... 62s Unpacking python3-numpy-groupies (0.10.2-2) ... 62s Selecting previously unselected package python3-pytz. 62s Preparing to unpack .../33-python3-pytz_2025.2-4_all.deb ... 62s Unpacking python3-pytz (2025.2-4) ... 62s Selecting previously unselected package python3-pandas-lib:amd64. 62s Preparing to unpack .../34-python3-pandas-lib_2.3.3+dfsg-1ubuntu1_amd64.deb ... 62s Unpacking python3-pandas-lib:amd64 (2.3.3+dfsg-1ubuntu1) ... 62s Selecting previously unselected package python3-pandas. 62s Preparing to unpack .../35-python3-pandas_2.3.3+dfsg-1ubuntu1_all.deb ... 62s Unpacking python3-pandas (2.3.3+dfsg-1ubuntu1) ... 62s Selecting previously unselected package python3-loompy. 62s Preparing to unpack .../36-python3-loompy_3.0.7+dfsg-4_amd64.deb ... 62s Unpacking python3-loompy (3.0.7+dfsg-4) ... 62s Selecting previously unselected package python3-pluggy. 62s Preparing to unpack .../37-python3-pluggy_1.6.0-1_all.deb ... 62s Unpacking python3-pluggy (1.6.0-1) ... 62s Selecting previously unselected package python3-pytest. 62s Preparing to unpack .../38-python3-pytest_8.3.5-2_all.deb ... 62s Unpacking python3-pytest (8.3.5-2) ... 62s Setting up python3-iniconfig (2.1.0-1) ... 62s Setting up libtbbmalloc2:amd64 (2022.1.0-3) ... 62s Setting up libpython3.14-minimal:amd64 (3.14.0-4) ... 62s Setting up llvm-20-runtime (1:20.1.8-0ubuntu6) ... 62s Setting up python3-pytz (2025.2-4) ... 62s Setting up libgomp1:amd64 (15.2.0-7ubuntu1) ... 62s Setting up python3-click (8.2.0+0.really.8.1.8-1) ... 63s Setting up libaec0:amd64 (1.1.4-2) ... 63s Setting up llvm-20-linker-tools (1:20.1.8-0ubuntu6) ... 63s Setting up python3-decorator (5.2.1-2) ... 63s Setting up libblas3:amd64 (3.12.1-7) ... 63s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 63s Setting up libpfm4:amd64 (4.13.0+git106-g3e4031b-1) ... 63s Setting up liblzf1:amd64 (3.6-4) ... 63s Setting up llvm-20 (1:20.1.8-0ubuntu6) ... 63s Setting up libhwloc15:amd64 (2.12.2-1) ... 63s Setting up python3-numpy-dev:amd64 (1:2.3.4+ds-3ubuntu1) ... 63s Setting up libgfortran5:amd64 (15.2.0-7ubuntu1) ... 63s Setting up python3-pluggy (1.6.0-1) ... 63s Setting up python3.14-minimal (3.14.0-4) ... 64s Setting up libsz2:amd64 (1.1.4-2) ... 64s Setting up liblapack3:amd64 (3.12.1-7) ... 64s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 64s Setting up libpython3.14-stdlib:amd64 (3.14.0-4) ... 64s Setting up python3-pytest (8.3.5-2) ... 64s Setting up libtbbbind-2-5:amd64 (2022.1.0-3) ... 64s Setting up python3-llvmlite (0.45.1-0ubuntu2) ... 64s Setting up python3-numpy (1:2.3.4+ds-3ubuntu1) ... 67s Setting up libhdf5-310:amd64 (1.14.5+repack-4) ... 67s Setting up python3.14 (3.14.0-4) ... 68s Setting up libhdf5-hl-310:amd64 (1.14.5+repack-4) ... 68s Setting up python3-scipy (1.15.3-1ubuntu1) ... 71s /usr/lib/python3/dist-packages/scipy/optimize/_optimize.py:921: SyntaxWarning: 'break' in a 'finally' block 71s break 73s Setting up python3-numpy-groupies (0.10.2-2) ... 73s Setting up python3-pandas-lib:amd64 (2.3.3+dfsg-1ubuntu1) ... 73s Setting up python3-h5py-serial (3.13.0-1ubuntu1) ... 73s Setting up python3-all (3.13.7-2) ... 73s Setting up libtbb12:amd64 (2022.1.0-3) ... 73s Setting up python3-numba (0.61.2+dfsg-1) ... 73s update-alternatives: using /usr/share/python3-numba/numba to provide /usr/bin/numba (numba) in auto mode 77s Setting up python3-pandas (2.3.3+dfsg-1ubuntu1) ... 83s Setting up python3-h5py (3.13.0-1ubuntu1) ... 83s Setting up python3-loompy (3.0.7+dfsg-4) ... 83s Processing triggers for systemd (257.9-0ubuntu2) ... 84s Processing triggers for man-db (2.13.1-1) ... 84s Processing triggers for libc-bin (2.42-2ubuntu2) ... 84s autopkgtest [10:32:15]: test run-unit-test: [----------------------- 85s ============================= test session starts ============================== 85s platform linux -- Python 3.14.0, pytest-8.3.5, pluggy-1.6.0 -- /usr/bin/python3.14 85s cachedir: .pytest_cache 85s rootdir: /tmp/autopkgtest.ORnTDu/autopkgtest_tmp 85s plugins: typeguard-4.4.2 85s collecting ... collected 0 items / 5 errors 85s 85s ==================================== ERRORS ==================================== 85s _______________ ERROR collecting tests/test_attribute_manager.py _______________ 85s ImportError while importing test module '/tmp/autopkgtest.ORnTDu/autopkgtest_tmp/tests/test_attribute_manager.py'. 85s Hint: make sure your test modules/packages have valid Python names. 85s Traceback: 85s /usr/lib/python3/dist-packages/h5py/__init__.py:24: in 85s from . import _debian_h5py_serial as _h5py 85s /usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py:25: in 85s from . import _errors 85s E ImportError: cannot import name '_errors' from partially initialized module 'h5py._debian_h5py_serial' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py) 85s 85s During handling of the above exception, another exception occurred: 85s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 85s return _bootstrap._gcd_import(name[level:], package, level) 85s tests/test_attribute_manager.py:3: in 85s from loompy import AttributeManager 85s /usr/lib/python3/dist-packages/loompy/__init__.py:1: in 85s from .utils import get_loom_spec_version, compare_loom_spec_version, timestamp, deprecated 85s /usr/lib/python3/dist-packages/loompy/utils.py:4: in 85s from h5py import File as HDF5File 85s /usr/lib/python3/dist-packages/h5py/__init__.py:26: in 85s from . import _debian_h5py_mpi as _h5py 85s E ImportError: cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py) 85s __________________ ERROR collecting tests/test_connection.py ___________________ 85s ImportError while importing test module '/tmp/autopkgtest.ORnTDu/autopkgtest_tmp/tests/test_connection.py'. 85s Hint: make sure your test modules/packages have valid Python names. 85s Traceback: 85s /usr/lib/python3/dist-packages/h5py/__init__.py:24: in 85s from . import _debian_h5py_serial as _h5py 85s /usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py:25: in 85s from . import _errors 85s E ImportError: cannot import name '_errors' from partially initialized module 'h5py._debian_h5py_serial' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py) 85s 85s During handling of the above exception, another exception occurred: 85s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 85s return _bootstrap._gcd_import(name[level:], package, level) 85s tests/test_connection.py:6: in 85s import loompy 85s /usr/lib/python3/dist-packages/loompy/__init__.py:1: in 85s from .utils import get_loom_spec_version, compare_loom_spec_version, timestamp, deprecated 85s /usr/lib/python3/dist-packages/loompy/utils.py:4: in 85s from h5py import File as HDF5File 85s /usr/lib/python3/dist-packages/h5py/__init__.py:26: in 85s from . import _debian_h5py_mpi as _h5py 85s E ImportError: cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py) 85s ____________ ERROR collecting tests/test_file_attribute_manager.py _____________ 85s ImportError while importing test module '/tmp/autopkgtest.ORnTDu/autopkgtest_tmp/tests/test_file_attribute_manager.py'. 85s Hint: make sure your test modules/packages have valid Python names. 85s Traceback: 85s /usr/lib/python3/dist-packages/h5py/__init__.py:24: in 85s from . import _debian_h5py_serial as _h5py 85s /usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py:25: in 85s from . import _errors 85s E ImportError: cannot import name '_errors' from partially initialized module 'h5py._debian_h5py_serial' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py) 85s 85s During handling of the above exception, another exception occurred: 85s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 85s return _bootstrap._gcd_import(name[level:], package, level) 85s tests/test_file_attribute_manager.py:5: in 85s import h5py 85s /usr/lib/python3/dist-packages/h5py/__init__.py:26: in 85s from . import _debian_h5py_mpi as _h5py 85s E ImportError: cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py) 85s _____________________ ERROR collecting tests/test_main.py ______________________ 85s ImportError while importing test module '/tmp/autopkgtest.ORnTDu/autopkgtest_tmp/tests/test_main.py'. 85s Hint: make sure your test modules/packages have valid Python names. 85s Traceback: 85s /usr/lib/python3/dist-packages/h5py/__init__.py:24: in 85s from . import _debian_h5py_serial as _h5py 85s /usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py:25: in 85s from . import _errors 85s E ImportError: cannot import name '_errors' from partially initialized module 'h5py._debian_h5py_serial' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py) 85s 85s During handling of the above exception, another exception occurred: 85s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 85s return _bootstrap._gcd_import(name[level:], package, level) 85s tests/test_main.py:1: in 85s import loompy 85s /usr/lib/python3/dist-packages/loompy/__init__.py:1: in 85s from .utils import get_loom_spec_version, compare_loom_spec_version, timestamp, deprecated 85s /usr/lib/python3/dist-packages/loompy/utils.py:4: in 85s from h5py import File as HDF5File 85s /usr/lib/python3/dist-packages/h5py/__init__.py:26: in 85s from . import _debian_h5py_mpi as _h5py 85s E ImportError: cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py) 85s ___________________ ERROR collecting tests/test_validator.py ___________________ 85s ImportError while importing test module '/tmp/autopkgtest.ORnTDu/autopkgtest_tmp/tests/test_validator.py'. 85s Hint: make sure your test modules/packages have valid Python names. 85s Traceback: 85s /usr/lib/python3/dist-packages/h5py/__init__.py:24: in 85s from . import _debian_h5py_serial as _h5py 85s /usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py:25: in 85s from . import _errors 85s E ImportError: cannot import name '_errors' from partially initialized module 'h5py._debian_h5py_serial' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py) 85s 85s During handling of the above exception, another exception occurred: 85s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 85s return _bootstrap._gcd_import(name[level:], package, level) 85s tests/test_validator.py:6: in 85s import loompy 85s /usr/lib/python3/dist-packages/loompy/__init__.py:1: in 85s from .utils import get_loom_spec_version, compare_loom_spec_version, timestamp, deprecated 85s /usr/lib/python3/dist-packages/loompy/utils.py:4: in 85s from h5py import File as HDF5File 85s /usr/lib/python3/dist-packages/h5py/__init__.py:26: in 85s from . import _debian_h5py_mpi as _h5py 85s E ImportError: cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py) 85s =========================== short test summary info ============================ 85s ERROR tests/test_attribute_manager.py 85s ERROR tests/test_connection.py 85s ERROR tests/test_file_attribute_manager.py 85s ERROR tests/test_main.py 85s ERROR tests/test_validator.py 85s !!!!!!!!!!!!!!!!!!! Interrupted: 5 errors during collection !!!!!!!!!!!!!!!!!!!! 85s ============================== 5 errors in 0.16s =============================== 85s autopkgtest [10:32:16]: test run-unit-test: -----------------------] 86s run-unit-test FAIL non-zero exit status 2 86s autopkgtest [10:32:17]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 86s autopkgtest [10:32:17]: test autodep8-python3: preparing testbed 105s Creating nova instance adt-resolute-amd64-python-loompy-20251117-103051-juju-7f2275-prod-proposed-migration-environment-2-90f8899a-f877-40e2-95c5-382e8bc2f80a from image adt/ubuntu-resolute-amd64-server-20251117.img (UUID 9762b0cc-7c5b-4854-acd5-cc74ad0de8c6)... 153s autopkgtest [10:33:24]: testbed dpkg architecture: amd64 153s autopkgtest [10:33:24]: testbed apt version: 3.1.11 153s autopkgtest [10:33:24]: @@@@@@@@@@@@@@@@@@@@ test bed setup 153s autopkgtest [10:33:24]: testbed release detected to be: resolute 154s autopkgtest [10:33:25]: updating testbed package index (apt update) 154s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [87.8 kB] 154s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 154s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 154s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 154s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [9848 B] 154s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [881 kB] 155s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [22.9 kB] 155s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [80.3 kB] 155s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [118 kB] 155s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [158 kB] 155s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [3128 B] 155s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted i386 Packages [3744 B] 155s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 Packages [64.6 kB] 155s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [336 B] 155s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [282 kB] 155s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [614 kB] 155s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [22.2 kB] 155s Get:18 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [13.4 kB] 155s Get:19 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [6516 B] 155s Get:20 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [680 B] 157s Fetched 2367 kB in 1s (2325 kB/s) 157s Reading package lists... 158s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 158s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 158s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 158s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 159s Reading package lists... 159s Reading package lists... 159s Building dependency tree... 159s Reading state information... 159s Calculating upgrade... 159s The following packages will be upgraded: 159s libpython3-stdlib python3 python3-minimal usbutils 159s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 159s Need to get 146 kB of archives. 159s After this operation, 0 B of additional disk space will be used. 159s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-minimal amd64 3.13.7-2 [27.8 kB] 159s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3 amd64 3.13.7-2 [23.9 kB] 159s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libpython3-stdlib amd64 3.13.7-2 [10.6 kB] 159s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 usbutils amd64 1:019-1 [83.9 kB] 159s dpkg-preconfigure: unable to re-open stdin: No such file or directory 159s Fetched 146 kB in 0s (11.7 MB/s) 159s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83372 files and directories currently installed.) 159s Preparing to unpack .../python3-minimal_3.13.7-2_amd64.deb ... 159s Unpacking python3-minimal (3.13.7-2) over (3.13.7-1) ... 159s Setting up python3-minimal (3.13.7-2) ... 160s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83372 files and directories currently installed.) 160s Preparing to unpack .../python3_3.13.7-2_amd64.deb ... 160s running python pre-rtupdate hooks for python3.13... 160s Unpacking python3 (3.13.7-2) over (3.13.7-1) ... 160s Preparing to unpack .../libpython3-stdlib_3.13.7-2_amd64.deb ... 160s Unpacking libpython3-stdlib:amd64 (3.13.7-2) over (3.13.7-1) ... 160s Preparing to unpack .../usbutils_1%3a019-1_amd64.deb ... 160s Unpacking usbutils (1:019-1) over (1:018-2) ... 160s Setting up usbutils (1:019-1) ... 160s Setting up libpython3-stdlib:amd64 (3.13.7-2) ... 160s Setting up python3 (3.13.7-2) ... 160s running python rtupdate hooks for python3.13... 160s running python post-rtupdate hooks for python3.13... 160s Processing triggers for man-db (2.13.1-1) ... 160s autopkgtest [10:33:31]: upgrading testbed (apt dist-upgrade and autopurge) 161s Reading package lists... 161s Building dependency tree... 161s Reading state information... 161s Calculating upgrade... 161s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 161s Reading package lists... 161s Building dependency tree... 161s Reading state information... 161s Solving dependencies... 161s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 164s Reading package lists... 164s Building dependency tree... 164s Reading state information... 164s Solving dependencies... 164s The following NEW packages will be installed: 164s libaec0 libblas3 libgfortran5 libgomp1 libhdf5-310 libhdf5-hl-310 libhwloc15 164s liblapack3 liblzf1 libpfm4 libpython3.14-minimal libpython3.14-stdlib libsz2 164s libtbb12 libtbbbind-2-5 libtbbmalloc2 llvm-20 llvm-20-linker-tools 164s llvm-20-runtime python3-all python3-click python3-decorator python3-h5py 164s python3-h5py-serial python3-llvmlite python3-loompy python3-numba 164s python3-numpy python3-numpy-dev python3-numpy-groupies python3-pandas 164s python3-pandas-lib python3-pytz python3-scipy python3.14 python3.14-minimal 164s 0 upgraded, 36 newly installed, 0 to remove and 0 not upgraded. 164s Need to get 101 MB of archives. 164s After this operation, 502 MB of additional disk space will be used. 164s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-numpy-dev amd64 1:2.3.4+ds-3ubuntu1 [147 kB] 164s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7 [259 kB] 164s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 15.2.0-7ubuntu1 [939 kB] 164s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7 [2739 kB] 165s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-numpy amd64 1:2.3.4+ds-3ubuntu1 [8126 kB] 165s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-minimal amd64 3.14.0-4 [906 kB] 165s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.14-minimal amd64 3.14.0-4 [2559 kB] 166s Get:8 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec0 amd64 1.1.4-2 [22.9 kB] 166s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 15.2.0-7ubuntu1 [151 kB] 166s Get:10 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsz2 amd64 1.1.4-2 [5516 B] 166s Get:11 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-310 amd64 1.14.5+repack-4 [1432 kB] 166s Get:12 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-310 amd64 1.14.5+repack-4 [59.8 kB] 166s Get:13 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhwloc15 amd64 2.12.2-1 [181 kB] 166s Get:14 http://ftpmaster.internal/ubuntu resolute/universe amd64 liblzf1 amd64 3.6-4 [7624 B] 166s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-stdlib amd64 3.14.0-4 [2397 kB] 166s Get:16 http://ftpmaster.internal/ubuntu resolute/universe amd64 libtbbbind-2-5 amd64 2022.1.0-3 [14.8 kB] 166s Get:17 http://ftpmaster.internal/ubuntu resolute/universe amd64 libtbbmalloc2 amd64 2022.1.0-3 [53.9 kB] 166s Get:18 http://ftpmaster.internal/ubuntu resolute/universe amd64 libtbb12 amd64 2022.1.0-3 [94.1 kB] 166s Get:19 http://ftpmaster.internal/ubuntu resolute/universe amd64 llvm-20-runtime amd64 1:20.1.8-0ubuntu6 [553 kB] 166s Get:20 http://ftpmaster.internal/ubuntu resolute/universe amd64 llvm-20-linker-tools amd64 1:20.1.8-0ubuntu6 [1331 kB] 166s Get:21 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpfm4 amd64 4.13.0+git106-g3e4031b-1 [438 kB] 166s Get:22 http://ftpmaster.internal/ubuntu resolute/universe amd64 llvm-20 amd64 1:20.1.8-0ubuntu6 [19.6 MB] 166s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.14 amd64 3.14.0-4 [805 kB] 166s Get:24 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-all amd64 3.13.7-2 [890 B] 166s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-click all 8.2.0+0.really.8.1.8-1 [80.0 kB] 166s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-decorator all 5.2.1-2 [28.1 kB] 166s Get:27 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5py-serial amd64 3.13.0-1ubuntu1 [1184 kB] 166s Get:28 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5py all 3.13.0-1ubuntu1 [8230 B] 166s Get:29 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-llvmlite amd64 0.45.1-0ubuntu2 [24.4 MB] 167s Get:30 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-scipy amd64 1.15.3-1ubuntu1 [20.3 MB] 167s Get:31 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-numba amd64 0.61.2+dfsg-1 [1811 kB] 167s Get:32 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-numpy-groupies all 0.10.2-2 [32.1 kB] 167s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-pytz all 2025.2-4 [32.3 kB] 167s Get:34 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pandas-lib amd64 2.3.3+dfsg-1ubuntu1 [7668 kB] 167s Get:35 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pandas all 2.3.3+dfsg-1ubuntu1 [2948 kB] 167s Get:36 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-loompy amd64 3.0.7+dfsg-4 [41.7 kB] 168s Fetched 101 MB in 3s (29.5 MB/s) 168s Selecting previously unselected package python3-numpy-dev:amd64. 168s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83372 files and directories currently installed.) 168s Preparing to unpack .../00-python3-numpy-dev_1%3a2.3.4+ds-3ubuntu1_amd64.deb ... 168s Unpacking python3-numpy-dev:amd64 (1:2.3.4+ds-3ubuntu1) ... 168s Selecting previously unselected package libblas3:amd64. 168s Preparing to unpack .../01-libblas3_3.12.1-7_amd64.deb ... 168s Unpacking libblas3:amd64 (3.12.1-7) ... 168s Selecting previously unselected package libgfortran5:amd64. 168s Preparing to unpack .../02-libgfortran5_15.2.0-7ubuntu1_amd64.deb ... 168s Unpacking libgfortran5:amd64 (15.2.0-7ubuntu1) ... 168s Selecting previously unselected package liblapack3:amd64. 168s Preparing to unpack .../03-liblapack3_3.12.1-7_amd64.deb ... 168s Unpacking liblapack3:amd64 (3.12.1-7) ... 168s Selecting previously unselected package python3-numpy. 168s Preparing to unpack .../04-python3-numpy_1%3a2.3.4+ds-3ubuntu1_amd64.deb ... 168s Unpacking python3-numpy (1:2.3.4+ds-3ubuntu1) ... 168s Selecting previously unselected package libpython3.14-minimal:amd64. 168s Preparing to unpack .../05-libpython3.14-minimal_3.14.0-4_amd64.deb ... 168s Unpacking libpython3.14-minimal:amd64 (3.14.0-4) ... 168s Selecting previously unselected package python3.14-minimal. 168s Preparing to unpack .../06-python3.14-minimal_3.14.0-4_amd64.deb ... 168s Unpacking python3.14-minimal (3.14.0-4) ... 168s Selecting previously unselected package libaec0:amd64. 168s Preparing to unpack .../07-libaec0_1.1.4-2_amd64.deb ... 168s Unpacking libaec0:amd64 (1.1.4-2) ... 168s Selecting previously unselected package libgomp1:amd64. 168s Preparing to unpack .../08-libgomp1_15.2.0-7ubuntu1_amd64.deb ... 168s Unpacking libgomp1:amd64 (15.2.0-7ubuntu1) ... 168s Selecting previously unselected package libsz2:amd64. 168s Preparing to unpack .../09-libsz2_1.1.4-2_amd64.deb ... 168s Unpacking libsz2:amd64 (1.1.4-2) ... 168s Selecting previously unselected package libhdf5-310:amd64. 168s Preparing to unpack .../10-libhdf5-310_1.14.5+repack-4_amd64.deb ... 168s Unpacking libhdf5-310:amd64 (1.14.5+repack-4) ... 168s Selecting previously unselected package libhdf5-hl-310:amd64. 168s Preparing to unpack .../11-libhdf5-hl-310_1.14.5+repack-4_amd64.deb ... 168s Unpacking libhdf5-hl-310:amd64 (1.14.5+repack-4) ... 168s Selecting previously unselected package libhwloc15:amd64. 168s Preparing to unpack .../12-libhwloc15_2.12.2-1_amd64.deb ... 168s Unpacking libhwloc15:amd64 (2.12.2-1) ... 168s Selecting previously unselected package liblzf1:amd64. 168s Preparing to unpack .../13-liblzf1_3.6-4_amd64.deb ... 168s Unpacking liblzf1:amd64 (3.6-4) ... 168s Selecting previously unselected package libpython3.14-stdlib:amd64. 168s Preparing to unpack .../14-libpython3.14-stdlib_3.14.0-4_amd64.deb ... 168s Unpacking libpython3.14-stdlib:amd64 (3.14.0-4) ... 168s Selecting previously unselected package libtbbbind-2-5:amd64. 168s Preparing to unpack .../15-libtbbbind-2-5_2022.1.0-3_amd64.deb ... 168s Unpacking libtbbbind-2-5:amd64 (2022.1.0-3) ... 168s Selecting previously unselected package libtbbmalloc2:amd64. 168s Preparing to unpack .../16-libtbbmalloc2_2022.1.0-3_amd64.deb ... 168s Unpacking libtbbmalloc2:amd64 (2022.1.0-3) ... 168s Selecting previously unselected package libtbb12:amd64. 168s Preparing to unpack .../17-libtbb12_2022.1.0-3_amd64.deb ... 168s Unpacking libtbb12:amd64 (2022.1.0-3) ... 168s Selecting previously unselected package llvm-20-runtime. 168s Preparing to unpack .../18-llvm-20-runtime_1%3a20.1.8-0ubuntu6_amd64.deb ... 168s Unpacking llvm-20-runtime (1:20.1.8-0ubuntu6) ... 168s Selecting previously unselected package llvm-20-linker-tools. 168s Preparing to unpack .../19-llvm-20-linker-tools_1%3a20.1.8-0ubuntu6_amd64.deb ... 168s Unpacking llvm-20-linker-tools (1:20.1.8-0ubuntu6) ... 168s Selecting previously unselected package libpfm4:amd64. 168s Preparing to unpack .../20-libpfm4_4.13.0+git106-g3e4031b-1_amd64.deb ... 168s Unpacking libpfm4:amd64 (4.13.0+git106-g3e4031b-1) ... 168s Selecting previously unselected package llvm-20. 168s Preparing to unpack .../21-llvm-20_1%3a20.1.8-0ubuntu6_amd64.deb ... 168s Unpacking llvm-20 (1:20.1.8-0ubuntu6) ... 168s Selecting previously unselected package python3.14. 168s Preparing to unpack .../22-python3.14_3.14.0-4_amd64.deb ... 168s Unpacking python3.14 (3.14.0-4) ... 168s Selecting previously unselected package python3-all. 168s Preparing to unpack .../23-python3-all_3.13.7-2_amd64.deb ... 168s Unpacking python3-all (3.13.7-2) ... 168s Selecting previously unselected package python3-click. 168s Preparing to unpack .../24-python3-click_8.2.0+0.really.8.1.8-1_all.deb ... 168s Unpacking python3-click (8.2.0+0.really.8.1.8-1) ... 168s Selecting previously unselected package python3-decorator. 168s Preparing to unpack .../25-python3-decorator_5.2.1-2_all.deb ... 168s Unpacking python3-decorator (5.2.1-2) ... 168s Selecting previously unselected package python3-h5py-serial. 168s Preparing to unpack .../26-python3-h5py-serial_3.13.0-1ubuntu1_amd64.deb ... 168s Unpacking python3-h5py-serial (3.13.0-1ubuntu1) ... 168s Selecting previously unselected package python3-h5py. 168s Preparing to unpack .../27-python3-h5py_3.13.0-1ubuntu1_all.deb ... 168s Unpacking python3-h5py (3.13.0-1ubuntu1) ... 168s Selecting previously unselected package python3-llvmlite. 168s Preparing to unpack .../28-python3-llvmlite_0.45.1-0ubuntu2_amd64.deb ... 168s Unpacking python3-llvmlite (0.45.1-0ubuntu2) ... 169s Selecting previously unselected package python3-scipy. 169s Preparing to unpack .../29-python3-scipy_1.15.3-1ubuntu1_amd64.deb ... 169s Unpacking python3-scipy (1.15.3-1ubuntu1) ... 169s Selecting previously unselected package python3-numba. 169s Preparing to unpack .../30-python3-numba_0.61.2+dfsg-1_amd64.deb ... 169s Unpacking python3-numba (0.61.2+dfsg-1) ... 169s Selecting previously unselected package python3-numpy-groupies. 169s Preparing to unpack .../31-python3-numpy-groupies_0.10.2-2_all.deb ... 169s Unpacking python3-numpy-groupies (0.10.2-2) ... 169s Selecting previously unselected package python3-pytz. 169s Preparing to unpack .../32-python3-pytz_2025.2-4_all.deb ... 169s Unpacking python3-pytz (2025.2-4) ... 169s Selecting previously unselected package python3-pandas-lib:amd64. 169s Preparing to unpack .../33-python3-pandas-lib_2.3.3+dfsg-1ubuntu1_amd64.deb ... 169s Unpacking python3-pandas-lib:amd64 (2.3.3+dfsg-1ubuntu1) ... 169s Selecting previously unselected package python3-pandas. 169s Preparing to unpack .../34-python3-pandas_2.3.3+dfsg-1ubuntu1_all.deb ... 169s Unpacking python3-pandas (2.3.3+dfsg-1ubuntu1) ... 169s Selecting previously unselected package python3-loompy. 169s Preparing to unpack .../35-python3-loompy_3.0.7+dfsg-4_amd64.deb ... 169s Unpacking python3-loompy (3.0.7+dfsg-4) ... 169s Setting up libtbbmalloc2:amd64 (2022.1.0-3) ... 169s Setting up libpython3.14-minimal:amd64 (3.14.0-4) ... 169s Setting up llvm-20-runtime (1:20.1.8-0ubuntu6) ... 169s Setting up python3-pytz (2025.2-4) ... 170s Setting up libgomp1:amd64 (15.2.0-7ubuntu1) ... 170s Setting up python3-click (8.2.0+0.really.8.1.8-1) ... 170s Setting up libaec0:amd64 (1.1.4-2) ... 170s Setting up llvm-20-linker-tools (1:20.1.8-0ubuntu6) ... 170s Setting up python3-decorator (5.2.1-2) ... 170s Setting up libblas3:amd64 (3.12.1-7) ... 170s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 170s Setting up libpfm4:amd64 (4.13.0+git106-g3e4031b-1) ... 170s Setting up liblzf1:amd64 (3.6-4) ... 170s Setting up llvm-20 (1:20.1.8-0ubuntu6) ... 170s Setting up libhwloc15:amd64 (2.12.2-1) ... 170s Setting up python3-numpy-dev:amd64 (1:2.3.4+ds-3ubuntu1) ... 170s Setting up libgfortran5:amd64 (15.2.0-7ubuntu1) ... 170s Setting up python3.14-minimal (3.14.0-4) ... 170s Setting up libsz2:amd64 (1.1.4-2) ... 170s Setting up liblapack3:amd64 (3.12.1-7) ... 170s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 170s Setting up libpython3.14-stdlib:amd64 (3.14.0-4) ... 170s Setting up libtbbbind-2-5:amd64 (2022.1.0-3) ... 170s Setting up python3-llvmlite (0.45.1-0ubuntu2) ... 171s Setting up python3-numpy (1:2.3.4+ds-3ubuntu1) ... 173s Setting up libhdf5-310:amd64 (1.14.5+repack-4) ... 173s Setting up python3.14 (3.14.0-4) ... 173s Setting up libhdf5-hl-310:amd64 (1.14.5+repack-4) ... 173s Setting up python3-scipy (1.15.3-1ubuntu1) ... 176s /usr/lib/python3/dist-packages/scipy/optimize/_optimize.py:921: SyntaxWarning: 'break' in a 'finally' block 176s break 178s Setting up python3-numpy-groupies (0.10.2-2) ... 178s Setting up python3-pandas-lib:amd64 (2.3.3+dfsg-1ubuntu1) ... 178s Setting up python3-h5py-serial (3.13.0-1ubuntu1) ... 178s Setting up python3-all (3.13.7-2) ... 178s Setting up libtbb12:amd64 (2022.1.0-3) ... 178s Setting up python3-numba (0.61.2+dfsg-1) ... 178s update-alternatives: using /usr/share/python3-numba/numba to provide /usr/bin/numba (numba) in auto mode 181s Setting up python3-pandas (2.3.3+dfsg-1ubuntu1) ... 186s Setting up python3-h5py (3.13.0-1ubuntu1) ... 186s Setting up python3-loompy (3.0.7+dfsg-4) ... 187s Processing triggers for systemd (257.9-0ubuntu2) ... 187s Processing triggers for man-db (2.13.1-1) ... 187s Processing triggers for libc-bin (2.42-2ubuntu2) ... 188s autopkgtest [10:33:59]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import loompy; print(loompy)" ; done 188s autopkgtest [10:33:59]: test autodep8-python3: [----------------------- 189s Testing with python3.14: 189s Traceback (most recent call last): 189s File "/usr/lib/python3/dist-packages/h5py/__init__.py", line 24, in 189s from . import _debian_h5py_serial as _h5py 189s File "/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py", line 25, in 189s from . import _errors 189s ImportError: cannot import name '_errors' from partially initialized module 'h5py._debian_h5py_serial' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/_debian_h5py_serial/__init__.py) 189s 189s During handling of the above exception, another exception occurred: 189s 189s Traceback (most recent call last): 189s File "", line 1, in 189s import loompy; print(loompy) 189s ^^^^^^^^^^^^^ 189s File "/usr/lib/python3/dist-packages/loompy/__init__.py", line 1, in 189s from .utils import get_loom_spec_version, compare_loom_spec_version, timestamp, deprecated 189s File "/usr/lib/python3/dist-packages/loompy/utils.py", line 4, in 189s from h5py import File as HDF5File 189s File "/usr/lib/python3/dist-packages/h5py/__init__.py", line 26, in 189s from . import _debian_h5py_mpi as _h5py 189s ImportError: cannot import name '_debian_h5py_mpi' from partially initialized module 'h5py' (most likely due to a circular import) (/usr/lib/python3/dist-packages/h5py/__init__.py) 189s autopkgtest [10:34:00]: test autodep8-python3: -----------------------] 189s autopkgtest [10:34:00]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 189s autodep8-python3 FAIL non-zero exit status 1 190s autopkgtest [10:34:01]: @@@@@@@@@@@@@@@@@@@@ summary 190s run-unit-test FAIL non-zero exit status 2 190s autodep8-python3 FAIL non-zero exit status 1