0s autopkgtest [19:56:56]: starting date and time: 2025-10-20 19:56:56+0000 0s autopkgtest [19:56:56]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [19:56:56]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.i3r8bin6/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:pytest,src:python-pluggy --apt-upgrade paleomix --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=pytest/8.4.2-1 python-pluggy/1.6.0-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-amd64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@sto01-9.secgroup --name adt-resolute-amd64-paleomix-20251020-195656-juju-7f2275-prod-proposed-migration-environment-20-c2f458b2-9c6d-4888-b56e-416864ecd6a8 --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-autopkgtest-workers-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 3s Creating nova instance adt-resolute-amd64-paleomix-20251020-195656-juju-7f2275-prod-proposed-migration-environment-20-c2f458b2-9c6d-4888-b56e-416864ecd6a8 from image adt/ubuntu-resolute-amd64-server-20251020.img (UUID 058eb65a-2f1f-4603-be3f-91b3fbc0088c)... 30s autopkgtest [19:57:26]: testbed dpkg architecture: amd64 31s autopkgtest [19:57:27]: testbed apt version: 3.1.8ubuntu1 31s autopkgtest [19:57:27]: @@@@@@@@@@@@@@@@@@@@ test bed setup 31s autopkgtest [19:57:27]: testbed release detected to be: None 32s autopkgtest [19:57:28]: updating testbed package index (apt update) 32s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [83.3 kB] 32s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 32s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 32s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 32s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [59.3 kB] 32s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [14.3 kB] 32s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [646 kB] 32s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5028 B] 32s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [71.7 kB] 32s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [120 kB] 32s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 Packages [28.0 kB] 32s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted i386 Packages [3208 B] 32s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [200 kB] 32s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [418 kB] 32s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [2772 B] 33s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [5972 B] 33s Fetched 1658 kB in 1s (1900 kB/s) 33s Reading package lists... 34s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 34s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 34s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 34s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 34s Reading package lists... 34s Reading package lists... 34s Building dependency tree... 34s Reading state information... 34s Calculating upgrade... 34s The following packages will be upgraded: 34s libbrotli1 libjson-c5 python3-inflect python3-oauthlib python3-zipp 34s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 34s Need to get 510 kB of archives. 34s After this operation, 27.6 kB of additional disk space will be used. 34s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 libjson-c5 amd64 0.18+ds-1.1 [37.7 kB] 34s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 libbrotli1 amd64 1.1.0-2build6 [334 kB] 34s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-inflect all 7.5.0-1 [33.9 kB] 34s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-oauthlib all 3.3.1-1 [93.5 kB] 34s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-zipp all 3.23.0-1 [10.4 kB] 35s dpkg-preconfigure: unable to re-open stdin: No such file or directory 35s Fetched 510 kB in 0s (49.0 MB/s) 35s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78444 files and directories currently installed.) 35s Preparing to unpack .../libjson-c5_0.18+ds-1.1_amd64.deb ... 35s Unpacking libjson-c5:amd64 (0.18+ds-1.1) over (0.18+ds-1) ... 35s Preparing to unpack .../libbrotli1_1.1.0-2build6_amd64.deb ... 35s Unpacking libbrotli1:amd64 (1.1.0-2build6) over (1.1.0-2build5) ... 35s Preparing to unpack .../python3-inflect_7.5.0-1_all.deb ... 35s Unpacking python3-inflect (7.5.0-1) over (7.3.1-2) ... 35s Preparing to unpack .../python3-oauthlib_3.3.1-1_all.deb ... 35s Unpacking python3-oauthlib (3.3.1-1) over (3.2.2-3) ... 35s Preparing to unpack .../python3-zipp_3.23.0-1_all.deb ... 35s Unpacking python3-zipp (3.23.0-1) over (3.21.0-1) ... 35s Setting up libbrotli1:amd64 (1.1.0-2build6) ... 35s Setting up python3-zipp (3.23.0-1) ... 35s Setting up python3-inflect (7.5.0-1) ... 35s Setting up python3-oauthlib (3.3.1-1) ... 35s Setting up libjson-c5:amd64 (0.18+ds-1.1) ... 35s Processing triggers for libc-bin (2.42-0ubuntu3) ... 35s autopkgtest [19:57:31]: upgrading testbed (apt dist-upgrade and autopurge) 36s Reading package lists... 36s Building dependency tree... 36s Reading state information... 36s Calculating upgrade... 36s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 36s Reading package lists... 36s Building dependency tree... 36s Reading state information... 36s Solving dependencies... 36s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 38s autopkgtest [19:57:34]: testbed running kernel: Linux 6.17.0-5-generic #5-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 22 10:00:33 UTC 2025 38s autopkgtest [19:57:34]: @@@@@@@@@@@@@@@@@@@@ apt-source paleomix 39s Get:1 http://ftpmaster.internal/ubuntu resolute/universe paleomix 1.3.8-2 (dsc) [2466 B] 39s Get:2 http://ftpmaster.internal/ubuntu resolute/universe paleomix 1.3.8-2 (tar) [1137 kB] 39s Get:3 http://ftpmaster.internal/ubuntu resolute/universe paleomix 1.3.8-2 (diff) [11.3 kB] 40s gpgv: Signature made Wed Oct 9 16:08:04 2024 UTC 40s gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA 40s gpgv: issuer "emollier@debian.org" 40s gpgv: Can't check signature: No public key 40s dpkg-source: warning: cannot verify inline signature for ./paleomix_1.3.8-2.dsc: no acceptable signature found 40s autopkgtest [19:57:36]: testing package paleomix version 1.3.8-2 40s autopkgtest [19:57:36]: build not needed 40s autopkgtest [19:57:36]: test run-unit-test: preparing testbed 40s Reading package lists... 40s Building dependency tree... 40s Reading state information... 40s Solving dependencies... 41s The following NEW packages will be installed: 41s adapterremoval adwaita-icon-theme at-spi2-common bcftools bedtools bowtie2 41s bwa ca-certificates-java dconf-gsettings-backend dconf-service default-jre 41s default-jre-headless examl fontconfig fontconfig-config fonts-dejavu-core 41s fonts-dejavu-mono gtk-update-icon-cache hicolor-icon-theme java-common 41s junit4 libamd-comgr2 libamdhip64-5 libapache-pom-java libasound2-data 41s libasound2t64 libatk-bridge2.0-0t64 libatk1.0-0t64 libatspi2.0-0t64 41s libavahi-client3 libavahi-common-data libavahi-common3 libbarclay-java 41s libblas3 libcairo-gobject2 libcairo2 libcolord2 libcommons-beanutils-java 41s libcommons-codec-java libcommons-collections3-java 41s libcommons-collections4-java libcommons-compress-java libcommons-io-java 41s libcommons-jexl2-java libcommons-lang3-java libcommons-logging-java 41s libcommons-math3-java libcommons-parent-java libcups2t64 libdatrie1 41s libdconf1 libdeflate0 libdrm-amdgpu1 libdrm-intel1 libepoxy0 41s libevent-core-2.1-7t64 libevent-pthreads-2.1-7t64 libezmorph-java libfabric1 41s libfontconfig1 libfreemarker-java libgatk-native-bindings-java libgbm1 41s libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgfortran5 libgif7 libgkl-java 41s libgl1 libgl1-mesa-dri libglvnd0 libglx-mesa0 libglx0 libgomp1 41s libgoogle-gson-java libgraphite2-3 libgsl-dev libgsl28 libgslcblas0 41s libgtk-3-0t64 libgtk-3-common libhamcrest-java libharfbuzz0b 41s libhsa-runtime64-1 libhsakmt1 libhts3t64 libhtscodecs2 libhtsjdk-java 41s libhttpclient-java libhttpcore-java libhwloc-plugins libhwloc15 libibmad5 41s libibumad3 libice6 libicu76 libjaxen-java libjbig0 libjoptsimple-java 41s libjpeg-turbo8 libjpeg8 libjson-java liblapack3 liblcms2-2 liblerc4 41s liblightcouch-java libllvm17t64 liblog4j2-java libmbedcrypto16 libmbedtls21 41s libmbedx509-7 libmongodb-java libncbi-ngs3 libncbi-vdb3 libngs-java 41s libngs-jni libnspr4 libnss3 libopenblas-dev libopenblas-pthread-dev 41s libopenblas0 libopenblas0-pthread libopenmpi40 libpango-1.0-0 41s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libpciaccess0 41s libpcsclite1 libpicard-java libpixman-1-0 libpsm2-2 librdmacm1t64 41s librhino-java libsharpyuv0 libslf4j-java libsm6 libsnappy-java libsnappy-jni 41s libsnappy1v5 libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 libucx0 41s libvulkan1 libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebp7 41s libx11-xcb1 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 41s libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcomposite1 41s libxcursor1 libxdamage1 libxerces2-java libxfixes3 libxft2 libxi6 41s libxinerama1 libxml-commons-external-java libxml-commons-resolver1.1-java 41s libxnvctrl0 libxom-java libxrandr2 libxrender1 libxshmfence1 libxss1 41s libxt6t64 libxtst6 libxxf86vm1 libze1 mafft mapdamage mesa-libgallium 41s mpi-default-bin ncbi-vdb-data ocl-icd-libopencl1 openjdk-21-jre 41s openjdk-21-jre-headless openmpi-bin openmpi-common paleomix phylip 41s picard-tools python3-coloredlogs python3-configargparse 41s python3-humanfriendly python3-iniconfig python3-packaging python3-pluggy 41s python3-pysam python3-pytest python3-ruamel.yaml python3-ruamel.yaml.clib 41s python3-setproctitle r-base-core r-cran-cli r-cran-codetools 41s r-cran-colorspace r-cran-fansi r-cran-farver r-cran-foreach r-cran-gam 41s r-cran-ggplot2 r-cran-glue r-cran-gtable r-cran-inline r-cran-isoband 41s r-cran-iterators r-cran-labeling r-cran-lattice r-cran-lifecycle 41s r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-mgcv 41s r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten 41s r-cran-r6 r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppgsl r-cran-rlang 41s r-cran-scales r-cran-tibble r-cran-utf8 r-cran-vctrs r-cran-viridislite 41s r-cran-withr radiant raxml samtools seqtk unzip x11-common xdg-utils zip 41s 0 upgraded, 251 newly installed, 0 to remove and 0 not upgraded. 41s Need to get 263 MB of archives. 41s After this operation, 943 MB of additional disk space will be used. 41s Get:1 http://ftpmaster.internal/ubuntu resolute/universe amd64 adapterremoval amd64 2.3.4-1 [168 kB] 41s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-5 [8326 B] 41s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8 amd64 2.1.5-4ubuntu2 [152 kB] 41s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 41s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate0 amd64 1.23-2 [49.9 kB] 41s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 41s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 41s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 41s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 41s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 libtiff6 amd64 4.7.0-3ubuntu3 [209 kB] 41s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libgdk-pixbuf-2.0-0 amd64 2.42.12+dfsg-5 [157 kB] 41s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 gtk-update-icon-cache amd64 4.20.1+ds-2 [54.6 kB] 41s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 hicolor-icon-theme all 0.18-2 [13.3 kB] 41s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 adwaita-icon-theme all 49.0-1 [581 kB] 41s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 at-spi2-common all 2.57.1-1 [9432 B] 41s Get:16 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhtscodecs2 amd64 1.6.1-2 [132 kB] 41s Get:17 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhts3t64 amd64 1.21+ds-1 [514 kB] 41s Get:18 http://ftpmaster.internal/ubuntu resolute/universe amd64 bcftools amd64 1.21-1 [962 kB] 41s Get:19 http://ftpmaster.internal/ubuntu resolute/universe amd64 bedtools amd64 2.31.1+dfsg-2 [674 kB] 41s Get:20 http://ftpmaster.internal/ubuntu resolute/universe amd64 bwa amd64 0.7.18-1 [204 kB] 41s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 ca-certificates-java all 20240118 [11.6 kB] 41s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 libdconf1 amd64 0.40.0-5willsync1 [41.3 kB] 41s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 dconf-service amd64 0.40.0-5willsync1 [28.7 kB] 41s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 dconf-gsettings-backend amd64 0.40.0-5willsync1 [23.5 kB] 41s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 java-common all 0.76 [6852 B] 41s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 liblcms2-2 amd64 2.16-2 [212 kB] 41s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 libnspr4 amd64 2:4.36-1ubuntu2 [118 kB] 41s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 libnss3 amd64 2:3.114-1 [1483 kB] 41s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libpcsclite1 amd64 2.3.3-1 [24.0 kB] 41s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 openjdk-21-jre-headless amd64 21.0.9~8ea-1 [46.5 MB] 42s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 default-jre-headless amd64 2:1.21-76 [3178 B] 42s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libatk1.0-0t64 amd64 2.57.1-1 [56.3 kB] 42s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 libxi6 amd64 2:1.8.2-1 [32.4 kB] 42s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 libatspi2.0-0t64 amd64 2.57.1-1 [85.3 kB] 42s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 libatk-bridge2.0-0t64 amd64 2.57.1-1 [66.7 kB] 42s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 42s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 42s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig-config amd64 2.15.0-2.3ubuntu1 [38.0 kB] 42s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libfontconfig1 amd64 2.15.0-2.3ubuntu1 [141 kB] 42s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 42s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-render0 amd64 1.17.0-2build1 [17.4 kB] 42s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-shm0 amd64 1.17.0-2build1 [6120 B] 42s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 libxrender1 amd64 1:0.9.12-1 [19.8 kB] 42s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 libcairo2 amd64 1.18.4-1build1 [611 kB] 42s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 libcairo-gobject2 amd64 1.18.4-1build1 [128 kB] 42s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libcolord2 amd64 1.4.7-3build1 [149 kB] 42s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libavahi-common-data amd64 0.8-16ubuntu3 [31.1 kB] 42s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libavahi-common3 amd64 0.8-16ubuntu3 [25.3 kB] 42s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libavahi-client3 amd64 0.8-16ubuntu3 [28.8 kB] 42s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 libcups2t64 amd64 2.4.12-0ubuntu3 [272 kB] 42s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 libepoxy0 amd64 1.5.10-2 [218 kB] 42s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 42s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libharfbuzz0b amd64 12.1.0-1 [535 kB] 42s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig amd64 2.15.0-2.3ubuntu1 [180 kB] 42s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 42s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libdatrie1 amd64 0.2.13-4 [19.3 kB] 42s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 42s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libpango-1.0-0 amd64 1.56.3-1build1 [247 kB] 42s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangoft2-1.0-0 amd64 1.56.3-1build1 [55.0 kB] 42s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 libpangocairo-1.0-0 amd64 1.56.3-1build1 [30.3 kB] 42s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 libwayland-client0 amd64 1.24.0-1build1 [29.6 kB] 42s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 libwayland-cursor0 amd64 1.24.0-1build1 [11.1 kB] 42s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 libwayland-egl1 amd64 1.24.0-1build1 [6474 B] 42s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcomposite1 amd64 1:0.4.6-1 [6642 B] 42s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 libxfixes3 amd64 1:6.0.0-2build1 [10.8 kB] 42s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcursor1 amd64 1:1.2.3-1 [23.1 kB] 42s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 libxdamage1 amd64 1:1.1.6-1build1 [6150 B] 42s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 libxinerama1 amd64 2:1.1.4-3build1 [6396 B] 42s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 libxrandr2 amd64 2:1.5.4-1 [19.6 kB] 42s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 libgtk-3-common all 3.24.50-1ubuntu2 [1425 kB] 42s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 libgtk-3-0t64 amd64 3.24.50-1ubuntu2 [3263 kB] 42s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libglvnd0 amd64 1.7.0-1build2 [65.1 kB] 42s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libx11-xcb1 amd64 2:1.8.12-1build1 [8044 B] 42s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-dri3-0 amd64 1.17.0-2build1 [8036 B] 42s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-glx0 amd64 1.17.0-2build1 [27.6 kB] 42s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-present0 amd64 1.17.0-2build1 [6446 B] 42s Get:77 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-xfixes0 amd64 1.17.0-2build1 [11.1 kB] 42s Get:78 http://ftpmaster.internal/ubuntu resolute/main amd64 libxxf86vm1 amd64 1:1.1.4-1build4 [9282 B] 42s Get:79 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-amdgpu1 amd64 2.4.125-1 [21.6 kB] 42s Get:80 http://ftpmaster.internal/ubuntu resolute/main amd64 libpciaccess0 amd64 0.18.1-1ubuntu2 [19.0 kB] 42s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 libdrm-intel1 amd64 2.4.125-1 [64.9 kB] 42s Get:82 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-randr0 amd64 1.17.0-2build1 [19.7 kB] 42s Get:83 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb-sync1 amd64 1.17.0-2build1 [10.1 kB] 42s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 libxshmfence1 amd64 1.3.3-1 [5262 B] 43s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 mesa-libgallium amd64 25.2.3-1ubuntu1 [11.1 MB] 43s Get:86 http://ftpmaster.internal/ubuntu resolute/main amd64 libgbm1 amd64 25.2.3-1ubuntu1 [34.0 kB] 43s Get:87 http://ftpmaster.internal/ubuntu resolute/main amd64 libvulkan1 amd64 1.4.321.0-1 [154 kB] 43s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 libgl1-mesa-dri amd64 25.2.3-1ubuntu1 [36.9 kB] 43s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 libglx-mesa0 amd64 25.2.3-1ubuntu1 [110 kB] 43s Get:90 http://ftpmaster.internal/ubuntu resolute/main amd64 libglx0 amd64 1.7.0-1build2 [40.3 kB] 43s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 libgl1 amd64 1.7.0-1build2 [101 kB] 43s Get:92 http://ftpmaster.internal/ubuntu resolute/main amd64 libasound2-data all 1.2.14-1ubuntu1 [21.2 kB] 43s Get:93 http://ftpmaster.internal/ubuntu resolute/main amd64 libasound2t64 amd64 1.2.14-1ubuntu1 [407 kB] 43s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 libgif7 amd64 5.2.2-1ubuntu2 [36.0 kB] 43s Get:95 http://ftpmaster.internal/ubuntu resolute/main amd64 x11-common all 1:7.7+24ubuntu1 [22.4 kB] 43s Get:96 http://ftpmaster.internal/ubuntu resolute/main amd64 libxtst6 amd64 2:1.2.5-1 [13.0 kB] 43s Get:97 http://ftpmaster.internal/ubuntu resolute/main amd64 openjdk-21-jre amd64 21.0.9~8ea-1 [225 kB] 43s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 default-jre amd64 2:1.21-76 [918 B] 43s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10build1 [98.8 kB] 43s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10build1 [8360 B] 43s Get:101 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpsm2-2 amd64 11.2.185-2.1 [193 kB] 43s Get:102 http://ftpmaster.internal/ubuntu resolute/main amd64 librdmacm1t64 amd64 56.1-1ubuntu1 [71.4 kB] 43s Get:103 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfabric1 amd64 2.1.0-1.1 [697 kB] 43s Get:104 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhwloc15 amd64 2.12.2-1 [181 kB] 43s Get:105 http://ftpmaster.internal/ubuntu resolute/universe amd64 libllvm17t64 amd64 1:17.0.6-22build1 [25.9 MB] 44s Get:106 http://ftpmaster.internal/ubuntu resolute/universe amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3build3 [14.3 MB] 44s Get:107 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhsakmt1 amd64 6.2.4+ds-1 [66.8 kB] 44s Get:108 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhsa-runtime64-1 amd64 6.1.2-3 [564 kB] 44s Get:109 http://ftpmaster.internal/ubuntu resolute/universe amd64 libamdhip64-5 amd64 5.7.1-6 [9698 kB] 44s Get:110 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 15.2.0-5ubuntu1 [151 kB] 44s Get:111 http://ftpmaster.internal/ubuntu resolute/main amd64 libibumad3 amd64 56.1-1ubuntu1 [31.3 kB] 44s Get:112 http://ftpmaster.internal/ubuntu resolute/main amd64 libibmad5 amd64 56.1-1ubuntu1 [44.0 kB] 44s Get:113 http://ftpmaster.internal/ubuntu resolute/universe amd64 libucx0 amd64 1.19.0+ds-1 [1308 kB] 44s Get:114 http://ftpmaster.internal/ubuntu resolute/main amd64 libxnvctrl0 amd64 510.47.03-0ubuntu4 [12.6 kB] 44s Get:115 http://ftpmaster.internal/ubuntu resolute/universe amd64 libze1 amd64 1.24.1-2 [599 kB] 44s Get:116 http://ftpmaster.internal/ubuntu resolute/main amd64 ocl-icd-libopencl1 amd64 2.3.3-1 [41.0 kB] 44s Get:117 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhwloc-plugins amd64 2.12.2-1 [22.2 kB] 44s Get:118 http://ftpmaster.internal/ubuntu resolute/universe amd64 libopenmpi40 amd64 5.0.8-8ubuntu1 [3384 kB] 44s Get:119 http://ftpmaster.internal/ubuntu resolute/universe amd64 openmpi-common all 5.0.8-8ubuntu1 [108 kB] 44s Get:120 http://ftpmaster.internal/ubuntu resolute/universe amd64 openmpi-bin amd64 5.0.8-8ubuntu1 [201 kB] 44s Get:121 http://ftpmaster.internal/ubuntu resolute/universe amd64 mpi-default-bin amd64 1.18 [2510 B] 45s Get:122 http://ftpmaster.internal/ubuntu resolute/universe amd64 examl amd64 3.0.22-6build1 [985 kB] 45s Get:123 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhamcrest-java all 2.2-2 [117 kB] 45s Get:124 http://ftpmaster.internal/ubuntu resolute/universe amd64 junit4 all 4.13.2-5 [348 kB] 45s Get:125 http://ftpmaster.internal/ubuntu resolute/universe amd64 libapache-pom-java all 33-2 [5874 B] 45s Get:126 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcommons-parent-java all 56-1 [10.7 kB] 45s Get:127 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcommons-lang3-java all 3.17.0-1 [603 kB] 45s Get:128 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfreemarker-java all 2.3.32-2.1 [1517 kB] 45s Get:129 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgoogle-gson-java all 2.10.1-1 [252 kB] 45s Get:130 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjoptsimple-java all 5.0.4-7 [73.2 kB] 45s Get:131 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcommons-codec-java all 1.18.0-1 [303 kB] 45s Get:132 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcommons-logging-java all 1.3.0-1ubuntu1 [63.8 kB] 45s Get:133 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhttpcore-java all 4.4.16-1 [612 kB] 45s Get:134 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhttpclient-java all 4.5.14-1 [1241 kB] 45s Get:135 http://ftpmaster.internal/ubuntu resolute/universe amd64 liblightcouch-java all 0.2.0-1 [74.2 kB] 45s Get:136 http://ftpmaster.internal/ubuntu resolute/universe amd64 libmongodb-java all 3.6.3-2 [1899 kB] 45s Get:137 http://ftpmaster.internal/ubuntu resolute/universe amd64 libslf4j-java all 1.7.32-2 [141 kB] 45s Get:138 http://ftpmaster.internal/ubuntu resolute/universe amd64 liblog4j2-java all 2.19.0-2 [2294 kB] 45s Get:139 http://ftpmaster.internal/ubuntu resolute/universe amd64 libbarclay-java all 5.0.0+dfsg-1 [108 kB] 45s Get:140 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-6build1 [263 kB] 45s Get:141 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcommons-collections3-java all 3.2.2-3 [526 kB] 45s Get:142 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcommons-beanutils-java all 1.10.1-1.1 [224 kB] 45s Get:143 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcommons-collections4-java all 4.4-2 [670 kB] 45s Get:144 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcommons-io-java all 2.19.0-1 [491 kB] 45s Get:145 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcommons-compress-java all 1.27.1-2 [610 kB] 45s Get:146 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcommons-jexl2-java all 2.1.1-6 [250 kB] 46s Get:147 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcommons-math3-java all 3.6.1-4 [2029 kB] 46s Get:148 http://ftpmaster.internal/ubuntu resolute/universe amd64 libezmorph-java all 1.0.6-4 [76.0 kB] 46s Get:149 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgatk-native-bindings-java all 1.0.0+dfsg-2 [8014 B] 46s Get:150 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 15.2.0-5ubuntu1 [939 kB] 46s Get:151 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjaxen-java all 1.1.6-5 [213 kB] 46s Get:152 http://ftpmaster.internal/ubuntu resolute/universe amd64 libxml-commons-external-java all 1.4.01-6 [240 kB] 46s Get:153 http://ftpmaster.internal/ubuntu resolute/universe amd64 libxml-commons-resolver1.1-java all 1.2-11 [97.6 kB] 46s Get:154 http://ftpmaster.internal/ubuntu resolute/universe amd64 libxerces2-java all 2.12.2-1 [1430 kB] 46s Get:155 http://ftpmaster.internal/ubuntu resolute/universe amd64 libxom-java all 1.3.9-1 [174 kB] 46s Get:156 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjson-java all 3.1.0+dfsg-2 [141 kB] 46s Get:157 http://ftpmaster.internal/ubuntu resolute/universe amd64 libmbedcrypto16 amd64 3.6.2-3ubuntu1 [276 kB] 46s Get:158 http://ftpmaster.internal/ubuntu resolute/universe amd64 libmbedx509-7 amd64 3.6.2-3ubuntu1 [37.1 kB] 46s Get:159 http://ftpmaster.internal/ubuntu resolute/universe amd64 libmbedtls21 amd64 3.6.2-3ubuntu1 [126 kB] 46s Get:160 http://ftpmaster.internal/ubuntu resolute/universe amd64 ncbi-vdb-data all 3.2.1+dfsg-2 [81.3 kB] 46s Get:161 http://ftpmaster.internal/ubuntu resolute/universe amd64 libncbi-vdb3 amd64 3.2.1+dfsg-2 [1376 kB] 46s Get:162 http://ftpmaster.internal/ubuntu resolute/universe amd64 libncbi-ngs3 amd64 3.2.1+dfsg-4ubuntu5 [152 kB] 46s Get:163 http://ftpmaster.internal/ubuntu resolute/universe amd64 libngs-jni amd64 3.2.1+dfsg-4ubuntu5 [4814 B] 46s Get:164 http://ftpmaster.internal/ubuntu resolute/universe amd64 libngs-java amd64 3.2.1+dfsg-4ubuntu5 [91.1 kB] 46s Get:165 http://ftpmaster.internal/ubuntu resolute/universe amd64 librhino-java all 1.7.15-1 [1354 kB] 46s Get:166 http://ftpmaster.internal/ubuntu resolute/main amd64 libsnappy1v5 amd64 1.2.2-1 [30.9 kB] 46s Get:167 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsnappy-jni amd64 1.1.10.7-1 [6786 B] 46s Get:168 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsnappy-java all 1.1.10.7-1 [83.6 kB] 46s Get:169 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhtsjdk-java all 4.1.3+dfsg-2 [1829 kB] 46s Get:170 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgkl-java all 0.8.11+dfsg-2build1 [24.9 kB] 46s Get:171 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgslcblas0 amd64 2.8+dfsg-5.1ubuntu1 [133 kB] 46s Get:172 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgsl28 amd64 2.8+dfsg-5.1ubuntu1 [1104 kB] 46s Get:173 http://ftpmaster.internal/ubuntu resolute/universe amd64 libgsl-dev amd64 2.8+dfsg-5.1ubuntu1 [1433 kB] 46s Get:174 http://ftpmaster.internal/ubuntu resolute/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 46s Get:175 http://ftpmaster.internal/ubuntu resolute/main amd64 libicu76 amd64 76.1-4ubuntu2 [11.2 MB] 47s Get:176 http://ftpmaster.internal/ubuntu resolute/universe amd64 libopenblas0-pthread amd64 0.3.30+ds-3 [5382 kB] 47s Get:177 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-6build1 [2762 kB] 47s Get:178 http://ftpmaster.internal/ubuntu resolute/universe amd64 libopenblas0 amd64 0.3.30+ds-3 [6304 B] 47s Get:179 http://ftpmaster.internal/ubuntu resolute/universe amd64 libopenblas-pthread-dev amd64 0.3.30+ds-3 [5107 kB] 47s Get:180 http://ftpmaster.internal/ubuntu resolute/universe amd64 libopenblas-dev amd64 0.3.30+ds-3 [21.3 kB] 47s Get:181 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB] 47s Get:182 http://ftpmaster.internal/ubuntu resolute/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB] 47s Get:183 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpicard-java all 3.3.0+dfsg-2 [1765 kB] 47s Get:184 http://ftpmaster.internal/ubuntu resolute/main amd64 libsm6 amd64 2:1.2.6-1 [16.4 kB] 47s Get:185 http://ftpmaster.internal/ubuntu resolute/main amd64 libtcl8.6 amd64 8.6.17+dfsg-1 [1036 kB] 47s Get:186 http://ftpmaster.internal/ubuntu resolute/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 47s Get:187 http://ftpmaster.internal/ubuntu resolute/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 47s Get:188 http://ftpmaster.internal/ubuntu resolute/main amd64 libtk8.6 amd64 8.6.17-1 [823 kB] 47s Get:189 http://ftpmaster.internal/ubuntu resolute/main amd64 libxt6t64 amd64 1:1.2.1-1.3 [173 kB] 47s Get:190 http://ftpmaster.internal/ubuntu resolute/universe amd64 mafft amd64 7.525-1 [841 kB] 47s Get:191 http://ftpmaster.internal/ubuntu resolute/main amd64 zip amd64 3.0-15ubuntu2 [178 kB] 47s Get:192 http://ftpmaster.internal/ubuntu resolute/main amd64 unzip amd64 6.0-28ubuntu7 [180 kB] 47s Get:193 http://ftpmaster.internal/ubuntu resolute/main amd64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 47s Get:194 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-base-core amd64 4.5.1-1 [28.9 MB] 48s Get:195 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-codetools all 0.2-20-1 [90.5 kB] 48s Get:196 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-iterators all 1.0.14-1 [336 kB] 48s Get:197 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-foreach all 1.5.2-1 [124 kB] 48s Get:198 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gam amd64 1.22-5-1 [394 kB] 48s Get:199 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB] 48s Get:200 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB] 48s Get:201 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rlang amd64 1.1.5-3 [1721 kB] 48s Get:202 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 48s Get:203 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 48s Get:204 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB] 48s Get:205 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mass amd64 7.3-65-1 [1116 kB] 48s Get:206 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-lattice amd64 0.22-7-1 [1367 kB] 49s Get:207 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-nlme amd64 3.1.168-1 [2320 kB] 49s Get:208 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-matrix amd64 1.7-3-1 [4349 kB] 49s Get:209 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-mgcv amd64 1.9-3-1 [3414 kB] 49s Get:210 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB] 49s Get:211 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB] 49s Get:212 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB] 49s Get:213 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-munsell all 0.5.1-1 [213 kB] 49s Get:214 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB] 49s Get:215 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 49s Get:216 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB] 49s Get:217 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-scales all 1.3.0-1 [603 kB] 49s Get:218 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-fansi amd64 1.0.6-2 [626 kB] 49s Get:219 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB] 49s Get:220 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB] 49s Get:221 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB] 49s Get:222 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 49s Get:223 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 49s Get:224 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB] 49s Get:225 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 49s Get:226 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 49s Get:227 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-inline all 0.3.21-1 [131 kB] 49s Get:228 http://ftpmaster.internal/ubuntu resolute/universe amd64 seqtk amd64 1.4-2 [34.6 kB] 49s Get:229 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pysam amd64 0.23.0+ds-1build1 [3966 kB] 49s Get:230 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-littler amd64 0.3.21-1 [99.3 kB] 49s Get:231 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 49s Get:232 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcpp amd64 1.1.0-1 [2021 kB] 49s Get:233 http://ftpmaster.internal/ubuntu resolute/universe amd64 r-cran-rcppgsl amd64 0.3.13-1build1 [199 kB] 49s Get:234 http://ftpmaster.internal/ubuntu resolute/universe amd64 mapdamage all 2.2.2+dfsg-1 [43.3 kB] 49s Get:235 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-humanfriendly all 10.0-6 [70.8 kB] 49s Get:236 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-coloredlogs all 15.0.1-1 [38.2 kB] 49s Get:237 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-configargparse all 1.7-2 [31.7 kB] 49s Get:238 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-ruamel.yaml.clib amd64 0.2.12+ds-1build1 [164 kB] 49s Get:239 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-ruamel.yaml all 0.18.10+ds-1 [127 kB] 49s Get:240 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-setproctitle amd64 1.3.7-1 [20.4 kB] 50s Get:241 http://ftpmaster.internal/ubuntu resolute/universe amd64 bowtie2 amd64 2.5.4-1 [1336 kB] 50s Get:242 http://ftpmaster.internal/ubuntu resolute/universe amd64 phylip amd64 1:3.697+dfsg-4build1 [874 kB] 50s Get:243 http://ftpmaster.internal/ubuntu resolute/universe amd64 picard-tools all 3.3.0+dfsg-2 [308 kB] 50s Get:244 http://ftpmaster.internal/ubuntu resolute/universe amd64 radiant all 2.8.1+dfsg-2 [184 kB] 50s Get:245 http://ftpmaster.internal/ubuntu resolute/universe amd64 raxml amd64 8.2.13+dfsg-2 [1670 kB] 50s Get:246 http://ftpmaster.internal/ubuntu resolute/universe amd64 samtools amd64 1.21-1 [655 kB] 50s Get:247 http://ftpmaster.internal/ubuntu resolute/universe amd64 paleomix amd64 1.3.8-2 [971 kB] 50s Get:248 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-iniconfig all 1.1.1-2 [6024 B] 50s Get:249 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-packaging all 25.0-1 [52.8 kB] 50s Get:250 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 python3-pluggy all 1.6.0-1 [21.0 kB] 50s Get:251 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 python3-pytest all 8.4.2-1 [268 kB] 50s Preconfiguring packages ... 50s Fetched 263 MB in 9s (28.7 MB/s) 50s Selecting previously unselected package adapterremoval. 50s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78454 files and directories currently installed.) 50s Preparing to unpack .../000-adapterremoval_2.3.4-1_amd64.deb ... 50s Unpacking adapterremoval (2.3.4-1) ... 50s Selecting previously unselected package libgdk-pixbuf2.0-common. 50s Preparing to unpack .../001-libgdk-pixbuf2.0-common_2.42.12+dfsg-5_all.deb ... 50s Unpacking libgdk-pixbuf2.0-common (2.42.12+dfsg-5) ... 50s Selecting previously unselected package libjpeg-turbo8:amd64. 50s Preparing to unpack .../002-libjpeg-turbo8_2.1.5-4ubuntu2_amd64.deb ... 50s Unpacking libjpeg-turbo8:amd64 (2.1.5-4ubuntu2) ... 50s Selecting previously unselected package libjpeg8:amd64. 50s Preparing to unpack .../003-libjpeg8_8c-2ubuntu11_amd64.deb ... 50s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 50s Selecting previously unselected package libdeflate0:amd64. 50s Preparing to unpack .../004-libdeflate0_1.23-2_amd64.deb ... 50s Unpacking libdeflate0:amd64 (1.23-2) ... 50s Selecting previously unselected package libjbig0:amd64. 50s Preparing to unpack .../005-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 50s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 50s Selecting previously unselected package liblerc4:amd64. 50s Preparing to unpack .../006-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ... 50s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 50s Selecting previously unselected package libsharpyuv0:amd64. 50s Preparing to unpack .../007-libsharpyuv0_1.5.0-0.1_amd64.deb ... 50s Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ... 50s Selecting previously unselected package libwebp7:amd64. 50s Preparing to unpack .../008-libwebp7_1.5.0-0.1_amd64.deb ... 50s Unpacking libwebp7:amd64 (1.5.0-0.1) ... 50s Selecting previously unselected package libtiff6:amd64. 50s Preparing to unpack .../009-libtiff6_4.7.0-3ubuntu3_amd64.deb ... 50s Unpacking libtiff6:amd64 (4.7.0-3ubuntu3) ... 50s Selecting previously unselected package libgdk-pixbuf-2.0-0:amd64. 50s Preparing to unpack .../010-libgdk-pixbuf-2.0-0_2.42.12+dfsg-5_amd64.deb ... 50s Unpacking libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-5) ... 50s Selecting previously unselected package gtk-update-icon-cache. 50s Preparing to unpack .../011-gtk-update-icon-cache_4.20.1+ds-2_amd64.deb ... 50s No diversion 'diversion of /usr/sbin/update-icon-caches to /usr/sbin/update-icon-caches.gtk2 by libgtk-3-bin', none removed. 50s No diversion 'diversion of /usr/share/man/man8/update-icon-caches.8.gz to /usr/share/man/man8/update-icon-caches.gtk2.8.gz by libgtk-3-bin', none removed. 50s Unpacking gtk-update-icon-cache (4.20.1+ds-2) ... 50s Selecting previously unselected package hicolor-icon-theme. 50s Preparing to unpack .../012-hicolor-icon-theme_0.18-2_all.deb ... 50s Unpacking hicolor-icon-theme (0.18-2) ... 50s Selecting previously unselected package adwaita-icon-theme. 50s Preparing to unpack .../013-adwaita-icon-theme_49.0-1_all.deb ... 50s Unpacking adwaita-icon-theme (49.0-1) ... 50s Selecting previously unselected package at-spi2-common. 50s Preparing to unpack .../014-at-spi2-common_2.57.1-1_all.deb ... 50s Unpacking at-spi2-common (2.57.1-1) ... 50s Selecting previously unselected package libhtscodecs2:amd64. 50s Preparing to unpack .../015-libhtscodecs2_1.6.1-2_amd64.deb ... 50s Unpacking libhtscodecs2:amd64 (1.6.1-2) ... 50s Selecting previously unselected package libhts3t64:amd64. 50s Preparing to unpack .../016-libhts3t64_1.21+ds-1_amd64.deb ... 50s Unpacking libhts3t64:amd64 (1.21+ds-1) ... 50s Selecting previously unselected package bcftools. 50s Preparing to unpack .../017-bcftools_1.21-1_amd64.deb ... 50s Unpacking bcftools (1.21-1) ... 50s Selecting previously unselected package bedtools. 50s Preparing to unpack .../018-bedtools_2.31.1+dfsg-2_amd64.deb ... 50s Unpacking bedtools (2.31.1+dfsg-2) ... 50s Selecting previously unselected package bwa. 50s Preparing to unpack .../019-bwa_0.7.18-1_amd64.deb ... 50s Unpacking bwa (0.7.18-1) ... 50s Selecting previously unselected package ca-certificates-java. 50s Preparing to unpack .../020-ca-certificates-java_20240118_all.deb ... 50s Unpacking ca-certificates-java (20240118) ... 50s Selecting previously unselected package libdconf1:amd64. 50s Preparing to unpack .../021-libdconf1_0.40.0-5willsync1_amd64.deb ... 50s Unpacking libdconf1:amd64 (0.40.0-5willsync1) ... 50s Selecting previously unselected package dconf-service. 50s Preparing to unpack .../022-dconf-service_0.40.0-5willsync1_amd64.deb ... 50s Unpacking dconf-service (0.40.0-5willsync1) ... 50s Selecting previously unselected package dconf-gsettings-backend:amd64. 50s Preparing to unpack .../023-dconf-gsettings-backend_0.40.0-5willsync1_amd64.deb ... 50s Unpacking dconf-gsettings-backend:amd64 (0.40.0-5willsync1) ... 50s Selecting previously unselected package java-common. 50s Preparing to unpack .../024-java-common_0.76_all.deb ... 50s Unpacking java-common (0.76) ... 50s Selecting previously unselected package liblcms2-2:amd64. 50s Preparing to unpack .../025-liblcms2-2_2.16-2_amd64.deb ... 50s Unpacking liblcms2-2:amd64 (2.16-2) ... 50s Selecting previously unselected package libnspr4:amd64. 50s Preparing to unpack .../026-libnspr4_2%3a4.36-1ubuntu2_amd64.deb ... 50s Unpacking libnspr4:amd64 (2:4.36-1ubuntu2) ... 50s Selecting previously unselected package libnss3:amd64. 50s Preparing to unpack .../027-libnss3_2%3a3.114-1_amd64.deb ... 50s Unpacking libnss3:amd64 (2:3.114-1) ... 51s Selecting previously unselected package libpcsclite1:amd64. 51s Preparing to unpack .../028-libpcsclite1_2.3.3-1_amd64.deb ... 51s Unpacking libpcsclite1:amd64 (2.3.3-1) ... 51s Selecting previously unselected package openjdk-21-jre-headless:amd64. 51s Preparing to unpack .../029-openjdk-21-jre-headless_21.0.9~8ea-1_amd64.deb ... 51s Unpacking openjdk-21-jre-headless:amd64 (21.0.9~8ea-1) ... 51s Selecting previously unselected package default-jre-headless. 51s Preparing to unpack .../030-default-jre-headless_2%3a1.21-76_amd64.deb ... 51s Unpacking default-jre-headless (2:1.21-76) ... 51s Selecting previously unselected package libatk1.0-0t64:amd64. 51s Preparing to unpack .../031-libatk1.0-0t64_2.57.1-1_amd64.deb ... 51s Unpacking libatk1.0-0t64:amd64 (2.57.1-1) ... 51s Selecting previously unselected package libxi6:amd64. 51s Preparing to unpack .../032-libxi6_2%3a1.8.2-1_amd64.deb ... 51s Unpacking libxi6:amd64 (2:1.8.2-1) ... 51s Selecting previously unselected package libatspi2.0-0t64:amd64. 51s Preparing to unpack .../033-libatspi2.0-0t64_2.57.1-1_amd64.deb ... 51s Unpacking libatspi2.0-0t64:amd64 (2.57.1-1) ... 54s Selecting previously unselected package libatk-bridge2.0-0t64:amd64. 54s Preparing to unpack .../034-libatk-bridge2.0-0t64_2.57.1-1_amd64.deb ... 54s Unpacking libatk-bridge2.0-0t64:amd64 (2.57.1-1) ... 54s Selecting previously unselected package fonts-dejavu-mono. 54s Preparing to unpack .../035-fonts-dejavu-mono_2.37-8_all.deb ... 54s Unpacking fonts-dejavu-mono (2.37-8) ... 54s Selecting previously unselected package fonts-dejavu-core. 54s Preparing to unpack .../036-fonts-dejavu-core_2.37-8_all.deb ... 54s Unpacking fonts-dejavu-core (2.37-8) ... 54s Selecting previously unselected package fontconfig-config. 54s Preparing to unpack .../037-fontconfig-config_2.15.0-2.3ubuntu1_amd64.deb ... 54s Unpacking fontconfig-config (2.15.0-2.3ubuntu1) ... 54s Selecting previously unselected package libfontconfig1:amd64. 54s Preparing to unpack .../038-libfontconfig1_2.15.0-2.3ubuntu1_amd64.deb ... 54s Unpacking libfontconfig1:amd64 (2.15.0-2.3ubuntu1) ... 54s Selecting previously unselected package libpixman-1-0:amd64. 54s Preparing to unpack .../039-libpixman-1-0_0.44.0-3_amd64.deb ... 54s Unpacking libpixman-1-0:amd64 (0.44.0-3) ... 54s Selecting previously unselected package libxcb-render0:amd64. 54s Preparing to unpack .../040-libxcb-render0_1.17.0-2build1_amd64.deb ... 54s Unpacking libxcb-render0:amd64 (1.17.0-2build1) ... 54s Selecting previously unselected package libxcb-shm0:amd64. 54s Preparing to unpack .../041-libxcb-shm0_1.17.0-2build1_amd64.deb ... 54s Unpacking libxcb-shm0:amd64 (1.17.0-2build1) ... 54s Selecting previously unselected package libxrender1:amd64. 54s Preparing to unpack .../042-libxrender1_1%3a0.9.12-1_amd64.deb ... 54s Unpacking libxrender1:amd64 (1:0.9.12-1) ... 54s Selecting previously unselected package libcairo2:amd64. 54s Preparing to unpack .../043-libcairo2_1.18.4-1build1_amd64.deb ... 54s Unpacking libcairo2:amd64 (1.18.4-1build1) ... 54s Selecting previously unselected package libcairo-gobject2:amd64. 54s Preparing to unpack .../044-libcairo-gobject2_1.18.4-1build1_amd64.deb ... 54s Unpacking libcairo-gobject2:amd64 (1.18.4-1build1) ... 54s Selecting previously unselected package libcolord2:amd64. 54s Preparing to unpack .../045-libcolord2_1.4.7-3build1_amd64.deb ... 54s Unpacking libcolord2:amd64 (1.4.7-3build1) ... 54s Selecting previously unselected package libavahi-common-data:amd64. 54s Preparing to unpack .../046-libavahi-common-data_0.8-16ubuntu3_amd64.deb ... 54s Unpacking libavahi-common-data:amd64 (0.8-16ubuntu3) ... 54s Selecting previously unselected package libavahi-common3:amd64. 54s Preparing to unpack .../047-libavahi-common3_0.8-16ubuntu3_amd64.deb ... 54s Unpacking libavahi-common3:amd64 (0.8-16ubuntu3) ... 54s Selecting previously unselected package libavahi-client3:amd64. 54s Preparing to unpack .../048-libavahi-client3_0.8-16ubuntu3_amd64.deb ... 54s Unpacking libavahi-client3:amd64 (0.8-16ubuntu3) ... 54s Selecting previously unselected package libcups2t64:amd64. 54s Preparing to unpack .../049-libcups2t64_2.4.12-0ubuntu3_amd64.deb ... 54s Unpacking libcups2t64:amd64 (2.4.12-0ubuntu3) ... 54s Selecting previously unselected package libepoxy0:amd64. 54s Preparing to unpack .../050-libepoxy0_1.5.10-2_amd64.deb ... 54s Unpacking libepoxy0:amd64 (1.5.10-2) ... 54s Selecting previously unselected package libgraphite2-3:amd64. 54s Preparing to unpack .../051-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 54s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 54s Selecting previously unselected package libharfbuzz0b:amd64. 54s Preparing to unpack .../052-libharfbuzz0b_12.1.0-1_amd64.deb ... 54s Unpacking libharfbuzz0b:amd64 (12.1.0-1) ... 54s Selecting previously unselected package fontconfig. 54s Preparing to unpack .../053-fontconfig_2.15.0-2.3ubuntu1_amd64.deb ... 54s Unpacking fontconfig (2.15.0-2.3ubuntu1) ... 54s Selecting previously unselected package libthai-data. 54s Preparing to unpack .../054-libthai-data_0.1.29-2build1_all.deb ... 54s Unpacking libthai-data (0.1.29-2build1) ... 54s Selecting previously unselected package libdatrie1:amd64. 54s Preparing to unpack .../055-libdatrie1_0.2.13-4_amd64.deb ... 54s Unpacking libdatrie1:amd64 (0.2.13-4) ... 54s Selecting previously unselected package libthai0:amd64. 54s Preparing to unpack .../056-libthai0_0.1.29-2build1_amd64.deb ... 54s Unpacking libthai0:amd64 (0.1.29-2build1) ... 54s Selecting previously unselected package libpango-1.0-0:amd64. 54s Preparing to unpack .../057-libpango-1.0-0_1.56.3-1build1_amd64.deb ... 54s Unpacking libpango-1.0-0:amd64 (1.56.3-1build1) ... 54s Selecting previously unselected package libpangoft2-1.0-0:amd64. 54s Preparing to unpack .../058-libpangoft2-1.0-0_1.56.3-1build1_amd64.deb ... 54s Unpacking libpangoft2-1.0-0:amd64 (1.56.3-1build1) ... 54s Selecting previously unselected package libpangocairo-1.0-0:amd64. 54s Preparing to unpack .../059-libpangocairo-1.0-0_1.56.3-1build1_amd64.deb ... 54s Unpacking libpangocairo-1.0-0:amd64 (1.56.3-1build1) ... 54s Selecting previously unselected package libwayland-client0:amd64. 54s Preparing to unpack .../060-libwayland-client0_1.24.0-1build1_amd64.deb ... 54s Unpacking libwayland-client0:amd64 (1.24.0-1build1) ... 54s Selecting previously unselected package libwayland-cursor0:amd64. 54s Preparing to unpack .../061-libwayland-cursor0_1.24.0-1build1_amd64.deb ... 54s Unpacking libwayland-cursor0:amd64 (1.24.0-1build1) ... 54s Selecting previously unselected package libwayland-egl1:amd64. 54s Preparing to unpack .../062-libwayland-egl1_1.24.0-1build1_amd64.deb ... 54s Unpacking libwayland-egl1:amd64 (1.24.0-1build1) ... 54s Selecting previously unselected package libxcomposite1:amd64. 54s Preparing to unpack .../063-libxcomposite1_1%3a0.4.6-1_amd64.deb ... 54s Unpacking libxcomposite1:amd64 (1:0.4.6-1) ... 54s Selecting previously unselected package libxfixes3:amd64. 54s Preparing to unpack .../064-libxfixes3_1%3a6.0.0-2build1_amd64.deb ... 54s Unpacking libxfixes3:amd64 (1:6.0.0-2build1) ... 54s Selecting previously unselected package libxcursor1:amd64. 54s Preparing to unpack .../065-libxcursor1_1%3a1.2.3-1_amd64.deb ... 54s Unpacking libxcursor1:amd64 (1:1.2.3-1) ... 54s Selecting previously unselected package libxdamage1:amd64. 54s Preparing to unpack .../066-libxdamage1_1%3a1.1.6-1build1_amd64.deb ... 54s Unpacking libxdamage1:amd64 (1:1.1.6-1build1) ... 54s Selecting previously unselected package libxinerama1:amd64. 54s Preparing to unpack .../067-libxinerama1_2%3a1.1.4-3build1_amd64.deb ... 54s Unpacking libxinerama1:amd64 (2:1.1.4-3build1) ... 54s Selecting previously unselected package libxrandr2:amd64. 54s Preparing to unpack .../068-libxrandr2_2%3a1.5.4-1_amd64.deb ... 54s Unpacking libxrandr2:amd64 (2:1.5.4-1) ... 54s Selecting previously unselected package libgtk-3-common. 54s Preparing to unpack .../069-libgtk-3-common_3.24.50-1ubuntu2_all.deb ... 54s Unpacking libgtk-3-common (3.24.50-1ubuntu2) ... 54s Selecting previously unselected package libgtk-3-0t64:amd64. 54s Preparing to unpack .../070-libgtk-3-0t64_3.24.50-1ubuntu2_amd64.deb ... 54s Unpacking libgtk-3-0t64:amd64 (3.24.50-1ubuntu2) ... 54s Selecting previously unselected package libglvnd0:amd64. 54s Preparing to unpack .../071-libglvnd0_1.7.0-1build2_amd64.deb ... 54s Unpacking libglvnd0:amd64 (1.7.0-1build2) ... 54s Selecting previously unselected package libx11-xcb1:amd64. 54s Preparing to unpack .../072-libx11-xcb1_2%3a1.8.12-1build1_amd64.deb ... 54s Unpacking libx11-xcb1:amd64 (2:1.8.12-1build1) ... 54s Selecting previously unselected package libxcb-dri3-0:amd64. 54s Preparing to unpack .../073-libxcb-dri3-0_1.17.0-2build1_amd64.deb ... 54s Unpacking libxcb-dri3-0:amd64 (1.17.0-2build1) ... 54s Selecting previously unselected package libxcb-glx0:amd64. 54s Preparing to unpack .../074-libxcb-glx0_1.17.0-2build1_amd64.deb ... 54s Unpacking libxcb-glx0:amd64 (1.17.0-2build1) ... 54s Selecting previously unselected package libxcb-present0:amd64. 54s Preparing to unpack .../075-libxcb-present0_1.17.0-2build1_amd64.deb ... 54s Unpacking libxcb-present0:amd64 (1.17.0-2build1) ... 54s Selecting previously unselected package libxcb-xfixes0:amd64. 54s Preparing to unpack .../076-libxcb-xfixes0_1.17.0-2build1_amd64.deb ... 54s Unpacking libxcb-xfixes0:amd64 (1.17.0-2build1) ... 54s Selecting previously unselected package libxxf86vm1:amd64. 54s Preparing to unpack .../077-libxxf86vm1_1%3a1.1.4-1build4_amd64.deb ... 54s Unpacking libxxf86vm1:amd64 (1:1.1.4-1build4) ... 54s Selecting previously unselected package libdrm-amdgpu1:amd64. 54s Preparing to unpack .../078-libdrm-amdgpu1_2.4.125-1_amd64.deb ... 54s Unpacking libdrm-amdgpu1:amd64 (2.4.125-1) ... 54s Selecting previously unselected package libpciaccess0:amd64. 54s Preparing to unpack .../079-libpciaccess0_0.18.1-1ubuntu2_amd64.deb ... 54s Unpacking libpciaccess0:amd64 (0.18.1-1ubuntu2) ... 54s Selecting previously unselected package libdrm-intel1:amd64. 54s Preparing to unpack .../080-libdrm-intel1_2.4.125-1_amd64.deb ... 54s Unpacking libdrm-intel1:amd64 (2.4.125-1) ... 54s Selecting previously unselected package libxcb-randr0:amd64. 54s Preparing to unpack .../081-libxcb-randr0_1.17.0-2build1_amd64.deb ... 54s Unpacking libxcb-randr0:amd64 (1.17.0-2build1) ... 54s Selecting previously unselected package libxcb-sync1:amd64. 54s Preparing to unpack .../082-libxcb-sync1_1.17.0-2build1_amd64.deb ... 54s Unpacking libxcb-sync1:amd64 (1.17.0-2build1) ... 54s Selecting previously unselected package libxshmfence1:amd64. 54s Preparing to unpack .../083-libxshmfence1_1.3.3-1_amd64.deb ... 54s Unpacking libxshmfence1:amd64 (1.3.3-1) ... 54s Selecting previously unselected package mesa-libgallium:amd64. 54s Preparing to unpack .../084-mesa-libgallium_25.2.3-1ubuntu1_amd64.deb ... 54s Unpacking mesa-libgallium:amd64 (25.2.3-1ubuntu1) ... 54s Selecting previously unselected package libgbm1:amd64. 54s Preparing to unpack .../085-libgbm1_25.2.3-1ubuntu1_amd64.deb ... 54s Unpacking libgbm1:amd64 (25.2.3-1ubuntu1) ... 54s Selecting previously unselected package libvulkan1:amd64. 54s Preparing to unpack .../086-libvulkan1_1.4.321.0-1_amd64.deb ... 54s Unpacking libvulkan1:amd64 (1.4.321.0-1) ... 54s Selecting previously unselected package libgl1-mesa-dri:amd64. 54s Preparing to unpack .../087-libgl1-mesa-dri_25.2.3-1ubuntu1_amd64.deb ... 54s Unpacking libgl1-mesa-dri:amd64 (25.2.3-1ubuntu1) ... 54s Selecting previously unselected package libglx-mesa0:amd64. 54s Preparing to unpack .../088-libglx-mesa0_25.2.3-1ubuntu1_amd64.deb ... 54s Unpacking libglx-mesa0:amd64 (25.2.3-1ubuntu1) ... 54s Selecting previously unselected package libglx0:amd64. 54s Preparing to unpack .../089-libglx0_1.7.0-1build2_amd64.deb ... 54s 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libxtst6:amd64. 54s Preparing to unpack .../095-libxtst6_2%3a1.2.5-1_amd64.deb ... 54s Unpacking libxtst6:amd64 (2:1.2.5-1) ... 54s Selecting previously unselected package openjdk-21-jre:amd64. 54s Preparing to unpack .../096-openjdk-21-jre_21.0.9~8ea-1_amd64.deb ... 54s Unpacking openjdk-21-jre:amd64 (21.0.9~8ea-1) ... 54s Selecting previously unselected package default-jre. 54s Preparing to unpack .../097-default-jre_2%3a1.21-76_amd64.deb ... 54s Unpacking default-jre (2:1.21-76) ... 54s Selecting previously unselected package libevent-core-2.1-7t64:amd64. 54s Preparing to unpack .../098-libevent-core-2.1-7t64_2.1.12-stable-10build1_amd64.deb ... 54s Unpacking libevent-core-2.1-7t64:amd64 (2.1.12-stable-10build1) ... 54s Selecting previously unselected package libevent-pthreads-2.1-7t64:amd64. 54s Preparing to unpack .../099-libevent-pthreads-2.1-7t64_2.1.12-stable-10build1_amd64.deb ... 54s Unpacking libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10build1) ... 54s Selecting previously unselected package libpsm2-2. 54s Preparing to unpack .../100-libpsm2-2_11.2.185-2.1_amd64.deb ... 54s Unpacking libpsm2-2 (11.2.185-2.1) ... 54s Selecting previously unselected package librdmacm1t64:amd64. 54s Preparing to unpack .../101-librdmacm1t64_56.1-1ubuntu1_amd64.deb ... 54s Unpacking librdmacm1t64:amd64 (56.1-1ubuntu1) ... 54s Selecting previously unselected package libfabric1:amd64. 54s Preparing to unpack .../102-libfabric1_2.1.0-1.1_amd64.deb ... 54s Unpacking libfabric1:amd64 (2.1.0-1.1) ... 54s Selecting previously unselected package libhwloc15:amd64. 54s Preparing to unpack .../103-libhwloc15_2.12.2-1_amd64.deb ... 54s Unpacking libhwloc15:amd64 (2.12.2-1) ... 54s Selecting previously unselected package libllvm17t64:amd64. 54s Preparing to unpack .../104-libllvm17t64_1%3a17.0.6-22build1_amd64.deb ... 54s Unpacking libllvm17t64:amd64 (1:17.0.6-22build1) ... 54s Selecting previously unselected package libamd-comgr2:amd64. 54s Preparing to unpack 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package libfreemarker-java. 54s Preparing to unpack .../127-libfreemarker-java_2.3.32-2.1_all.deb ... 54s Unpacking libfreemarker-java (2.3.32-2.1) ... 54s Selecting previously unselected package libgoogle-gson-java. 54s Preparing to unpack .../128-libgoogle-gson-java_2.10.1-1_all.deb ... 54s Unpacking libgoogle-gson-java (2.10.1-1) ... 54s Selecting previously unselected package libjoptsimple-java. 54s Preparing to unpack .../129-libjoptsimple-java_5.0.4-7_all.deb ... 54s Unpacking libjoptsimple-java (5.0.4-7) ... 54s Selecting previously unselected package libcommons-codec-java. 54s Preparing to unpack .../130-libcommons-codec-java_1.18.0-1_all.deb ... 54s Unpacking libcommons-codec-java (1.18.0-1) ... 54s Selecting previously unselected package libcommons-logging-java. 54s Preparing to unpack .../131-libcommons-logging-java_1.3.0-1ubuntu1_all.deb ... 54s Unpacking libcommons-logging-java (1.3.0-1ubuntu1) ... 54s Selecting previously unselected package libhttpcore-java. 54s Preparing 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previously unselected package libbarclay-java. 54s Preparing to unpack .../138-libbarclay-java_5.0.0+dfsg-1_all.deb ... 54s Unpacking libbarclay-java (5.0.0+dfsg-1) ... 54s Selecting previously unselected package libblas3:amd64. 54s Preparing to unpack .../139-libblas3_3.12.1-6build1_amd64.deb ... 54s Unpacking libblas3:amd64 (3.12.1-6build1) ... 54s Selecting previously unselected package libcommons-collections3-java. 54s Preparing to unpack .../140-libcommons-collections3-java_3.2.2-3_all.deb ... 54s Unpacking libcommons-collections3-java (3.2.2-3) ... 54s Selecting previously unselected package libcommons-beanutils-java. 54s Preparing to unpack .../141-libcommons-beanutils-java_1.10.1-1.1_all.deb ... 54s Unpacking libcommons-beanutils-java (1.10.1-1.1) ... 54s Selecting previously unselected package libcommons-collections4-java. 54s Preparing to unpack .../142-libcommons-collections4-java_4.4-2_all.deb ... 54s Unpacking libcommons-collections4-java (4.4-2) ... 54s Selecting 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libxerces2-java. 54s Preparing to unpack .../153-libxerces2-java_2.12.2-1_all.deb ... 54s Unpacking libxerces2-java (2.12.2-1) ... 54s Selecting previously unselected package libxom-java. 54s Preparing to unpack .../154-libxom-java_1.3.9-1_all.deb ... 54s Unpacking libxom-java (1.3.9-1) ... 54s Selecting previously unselected package libjson-java. 54s Preparing to unpack .../155-libjson-java_3.1.0+dfsg-2_all.deb ... 54s Unpacking libjson-java (3.1.0+dfsg-2) ... 54s Selecting previously unselected package libmbedcrypto16:amd64. 54s Preparing to unpack .../156-libmbedcrypto16_3.6.2-3ubuntu1_amd64.deb ... 54s Unpacking libmbedcrypto16:amd64 (3.6.2-3ubuntu1) ... 54s Selecting previously unselected package libmbedx509-7:amd64. 54s Preparing to unpack .../157-libmbedx509-7_3.6.2-3ubuntu1_amd64.deb ... 54s Unpacking libmbedx509-7:amd64 (3.6.2-3ubuntu1) ... 54s Selecting previously unselected package libmbedtls21:amd64. 54s Preparing to unpack .../158-libmbedtls21_3.6.2-3ubuntu1_amd64.deb ... 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libicu76:amd64 (76.1-4ubuntu2) ... 54s Selecting previously unselected package libopenblas0-pthread:amd64. 54s Preparing to unpack .../175-libopenblas0-pthread_0.3.30+ds-3_amd64.deb ... 54s Unpacking libopenblas0-pthread:amd64 (0.3.30+ds-3) ... 54s Selecting previously unselected package liblapack3:amd64. 54s Preparing to unpack .../176-liblapack3_3.12.1-6build1_amd64.deb ... 54s Unpacking liblapack3:amd64 (3.12.1-6build1) ... 54s Selecting previously unselected package libopenblas0:amd64. 54s Preparing to unpack .../177-libopenblas0_0.3.30+ds-3_amd64.deb ... 54s Unpacking libopenblas0:amd64 (0.3.30+ds-3) ... 54s Selecting previously unselected package libopenblas-pthread-dev:amd64. 54s Preparing to unpack .../178-libopenblas-pthread-dev_0.3.30+ds-3_amd64.deb ... 54s Unpacking libopenblas-pthread-dev:amd64 (0.3.30+ds-3) ... 54s Selecting previously unselected package libopenblas-dev:amd64. 54s Preparing to unpack .../179-libopenblas-dev_0.3.30+ds-3_amd64.deb ... 54s Unpacking libopenblas-dev:amd64 (0.3.30+ds-3) ... 54s Selecting previously unselected package libpaper2:amd64. 54s Preparing to unpack .../180-libpaper2_2.2.5-0.3_amd64.deb ... 54s Unpacking libpaper2:amd64 (2.2.5-0.3) ... 54s Selecting previously unselected package libpaper-utils. 54s Preparing to unpack .../181-libpaper-utils_2.2.5-0.3_amd64.deb ... 54s Unpacking libpaper-utils (2.2.5-0.3) ... 54s Selecting previously unselected package libpicard-java. 54s Preparing to unpack .../182-libpicard-java_3.3.0+dfsg-2_all.deb ... 54s Unpacking libpicard-java (3.3.0+dfsg-2) ... 54s Selecting previously unselected package libsm6:amd64. 54s Preparing to unpack .../183-libsm6_2%3a1.2.6-1_amd64.deb ... 54s Unpacking libsm6:amd64 (2:1.2.6-1) ... 54s Selecting previously unselected package libtcl8.6:amd64. 54s Preparing to unpack .../184-libtcl8.6_8.6.17+dfsg-1_amd64.deb ... 54s Unpacking libtcl8.6:amd64 (8.6.17+dfsg-1) ... 54s Selecting previously unselected package libxft2:amd64. 54s Preparing to unpack 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.../191-unzip_6.0-28ubuntu7_amd64.deb ... 54s Unpacking unzip (6.0-28ubuntu7) ... 54s Selecting previously unselected package xdg-utils. 54s Preparing to unpack .../192-xdg-utils_1.2.1-2ubuntu1_all.deb ... 54s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 55s Selecting previously unselected package r-base-core. 55s Preparing to unpack .../193-r-base-core_4.5.1-1_amd64.deb ... 55s Unpacking r-base-core (4.5.1-1) ... 55s Selecting previously unselected package r-cran-codetools. 55s Preparing to unpack .../194-r-cran-codetools_0.2-20-1_all.deb ... 55s Unpacking r-cran-codetools (0.2-20-1) ... 55s Selecting previously unselected package r-cran-iterators. 55s Preparing to unpack .../195-r-cran-iterators_1.0.14-1_all.deb ... 55s Unpacking r-cran-iterators (1.0.14-1) ... 55s Selecting previously unselected package r-cran-foreach. 55s Preparing to unpack .../196-r-cran-foreach_1.5.2-1_all.deb ... 55s Unpacking r-cran-foreach (1.5.2-1) ... 55s Selecting previously unselected package r-cran-gam. 55s 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r-cran-isoband. 55s Preparing to unpack .../203-r-cran-isoband_0.2.7-1_amd64.deb ... 55s Unpacking r-cran-isoband (0.2.7-1) ... 55s Selecting previously unselected package r-cran-mass. 55s Preparing to unpack .../204-r-cran-mass_7.3-65-1_amd64.deb ... 55s Unpacking r-cran-mass (7.3-65-1) ... 55s Selecting previously unselected package r-cran-lattice. 55s Preparing to unpack .../205-r-cran-lattice_0.22-7-1_amd64.deb ... 55s Unpacking r-cran-lattice (0.22-7-1) ... 55s Selecting previously unselected package r-cran-nlme. 55s Preparing to unpack .../206-r-cran-nlme_3.1.168-1_amd64.deb ... 55s Unpacking r-cran-nlme (3.1.168-1) ... 55s Selecting previously unselected package r-cran-matrix. 55s Preparing to unpack .../207-r-cran-matrix_1.7-3-1_amd64.deb ... 55s Unpacking r-cran-matrix (1.7-3-1) ... 55s Selecting previously unselected package r-cran-mgcv. 55s Preparing to unpack .../208-r-cran-mgcv_1.9-3-1_amd64.deb ... 55s Unpacking r-cran-mgcv (1.9-3-1) ... 55s Selecting previously unselected package r-cran-farver. 55s Preparing to unpack .../209-r-cran-farver_2.1.2-1_amd64.deb ... 55s Unpacking r-cran-farver (2.1.2-1) ... 55s Selecting previously unselected package r-cran-labeling. 55s Preparing to unpack .../210-r-cran-labeling_0.4.3-1_all.deb ... 55s Unpacking r-cran-labeling (0.4.3-1) ... 55s Selecting previously unselected package r-cran-colorspace. 55s Preparing to unpack .../211-r-cran-colorspace_2.1-1+dfsg-1_amd64.deb ... 55s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 55s Selecting previously unselected package r-cran-munsell. 55s Preparing to unpack .../212-r-cran-munsell_0.5.1-1_all.deb ... 55s Unpacking r-cran-munsell (0.5.1-1) ... 55s Selecting previously unselected package r-cran-r6. 55s Preparing to unpack .../213-r-cran-r6_2.6.1-1_all.deb ... 55s Unpacking r-cran-r6 (2.6.1-1) ... 55s Selecting previously unselected package r-cran-rcolorbrewer. 55s Preparing to unpack .../214-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 55s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 55s Selecting previously unselected package r-cran-viridislite. 55s Preparing to unpack .../215-r-cran-viridislite_0.4.2-2_all.deb ... 55s Unpacking r-cran-viridislite (0.4.2-2) ... 55s Selecting previously unselected package r-cran-scales. 55s Preparing to unpack .../216-r-cran-scales_1.3.0-1_all.deb ... 55s Unpacking r-cran-scales (1.3.0-1) ... 55s Selecting previously unselected package r-cran-fansi. 55s Preparing to unpack .../217-r-cran-fansi_1.0.6-2_amd64.deb ... 55s Unpacking r-cran-fansi (1.0.6-2) ... 55s Selecting previously unselected package r-cran-magrittr. 55s Preparing to unpack .../218-r-cran-magrittr_2.0.3-1_amd64.deb ... 55s Unpacking r-cran-magrittr (2.0.3-1) ... 55s Selecting previously unselected package r-cran-utf8. 55s Preparing to unpack .../219-r-cran-utf8_1.2.4-1_amd64.deb ... 55s Unpacking r-cran-utf8 (1.2.4-1) ... 55s Selecting previously unselected package r-cran-vctrs. 55s Preparing to unpack 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previously unselected package r-cran-inline. 55s Preparing to unpack .../226-r-cran-inline_0.3.21-1_all.deb ... 55s Unpacking r-cran-inline (0.3.21-1) ... 55s Selecting previously unselected package seqtk. 55s Preparing to unpack .../227-seqtk_1.4-2_amd64.deb ... 55s Unpacking seqtk (1.4-2) ... 55s Selecting previously unselected package python3-pysam. 55s Preparing to unpack .../228-python3-pysam_0.23.0+ds-1build1_amd64.deb ... 55s Unpacking python3-pysam (0.23.0+ds-1build1) ... 55s Selecting previously unselected package r-cran-littler. 55s Preparing to unpack .../229-r-cran-littler_0.3.21-1_amd64.deb ... 55s Unpacking r-cran-littler (0.3.21-1) ... 55s Selecting previously unselected package r-cran-pkgkitten. 55s Preparing to unpack .../230-r-cran-pkgkitten_0.2.4-1_all.deb ... 55s Unpacking r-cran-pkgkitten (0.2.4-1) ... 55s Selecting previously unselected package r-cran-rcpp. 55s Preparing to unpack .../231-r-cran-rcpp_1.1.0-1_amd64.deb ... 55s Unpacking r-cran-rcpp (1.1.0-1) ... 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... 56s Setting up zip (3.0-15ubuntu2) ... 56s Setting up librhino-java (1.7.15-1) ... 56s Setting up libblas3:amd64 (3.12.1-6build1) ... 56s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 56s Setting up python3-packaging (25.0-1) ... 56s Setting up libasound2t64:amd64 (1.2.14-1ubuntu1) ... 56s Setting up libllvm17t64:amd64 (1:17.0.6-22build1) ... 56s Setting up libjaxen-java (1.1.6-5) ... 56s Setting up python3-humanfriendly (10.0-6) ... 56s Setting up libepoxy0:amd64 (1.5.10-2) ... 56s Setting up libnspr4:amd64 (2:4.36-1ubuntu2) ... 56s Setting up libxfixes3:amd64 (1:6.0.0-2build1) ... 56s Setting up libxcb-sync1:amd64 (1.17.0-2build1) ... 56s Setting up libapache-pom-java (33-2) ... 56s Setting up libavahi-common-data:amd64 (0.8-16ubuntu3) ... 56s Setting up libatspi2.0-0t64:amd64 (2.57.1-1) ... 56s Setting up libxinerama1:amd64 (2:1.1.4-3build1) ... 56s Setting up fonts-dejavu-mono (2.37-8) ... 56s Setting up libhwloc15:amd64 (2.12.2-1) ... 56s Setting up libxml-commons-resolver1.1-java (1.2-11) ... 56s Setting up python3-setproctitle:amd64 (1.3.7-1) ... 56s Setting up libxrandr2:amd64 (2:1.5.4-1) ... 56s Setting up libtcl8.6:amd64 (8.6.17+dfsg-1) ... 56s Setting up fonts-dejavu-core (2.37-8) ... 56s Setting up libpcsclite1:amd64 (2.3.3-1) ... 56s Setting up libmongodb-java (3.6.3-2) ... 56s Setting up libjpeg-turbo8:amd64 (2.1.5-4ubuntu2) ... 56s Setting up libhamcrest-java (2.2-2) ... 56s Setting up libgfortran5:amd64 (15.2.0-5ubuntu1) ... 56s Setting up libvulkan1:amd64 (1.4.321.0-1) ... 56s Setting up python3-pluggy (1.6.0-1) ... 56s Setting up libwebp7:amd64 (1.5.0-0.1) ... 56s Setting up python3-ruamel.yaml (0.18.10+ds-1) ... 57s Setting up libgif7:amd64 (5.2.2-1ubuntu2) ... 57s Setting up libfreemarker-java (2.3.32-2.1) ... 57s Setting up ocl-icd-libopencl1:amd64 (2.3.3-1) ... 57s Setting up libxshmfence1:amd64 (1.3.3-1) ... 57s Setting up at-spi2-common (2.57.1-1) ... 57s Setting up libxcb-randr0:amd64 (1.17.0-2build1) ... 57s Setting up libxml-commons-external-java (1.4.01-6) ... 57s Setting up libpsm2-2 (11.2.185-2.1) ... 57s Setting up openmpi-common (5.0.8-8ubuntu1) ... 57s Setting up libhts3t64:amd64 (1.21+ds-1) ... 57s Setting up librdmacm1t64:amd64 (56.1-1ubuntu1) ... 57s Setting up libharfbuzz0b:amd64 (12.1.0-1) ... 57s Setting up ncbi-vdb-data (3.2.1+dfsg-2) ... 57s Setting up libthai-data (0.1.29-2build1) ... 57s Setting up libcommons-math3-java (3.6.1-4) ... 57s Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10build1) ... 57s Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3build3) ... 57s Setting up libwayland-egl1:amd64 (1.24.0-1build1) ... 57s Setting up libxss1:amd64 (1:1.2.3-1build3) ... 57s Setting up libicu76:amd64 (76.1-4ubuntu2) ... 57s Setting up libmbedcrypto16:amd64 (3.6.2-3ubuntu1) ... 57s Setting up libpaper2:amd64 (2.2.5-0.3) ... 57s Setting up libhttpcore-java (4.4.16-1) ... 57s Setting up libjoptsimple-java (5.0.4-7) ... 57s Setting up ca-certificates-java (20240118) ... 57s No JRE found. Skipping Java certificates setup. 57s Setting up libxerces2-java (2.12.2-1) ... 57s Setting up libgsl28:amd64 (2.8+dfsg-5.1ubuntu1) ... 57s Setting up python3-coloredlogs (15.0.1-1) ... 57s Setting up libsnappy-jni (1.1.10.7-1) ... 57s Setting up libezmorph-java (1.0.6-4) ... 57s Setting up libxcomposite1:amd64 (1:0.4.6-1) ... 57s Setting up xdg-utils (1.2.1-2ubuntu1) ... 57s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 57s Setting up bedtools (2.31.1+dfsg-2) ... 57s Setting up raxml (8.2.13+dfsg-2) ... 57s Setting up libdrm-amdgpu1:amd64 (2.4.125-1) ... 57s Setting up libwayland-client0:amd64 (1.24.0-1build1) ... 57s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 57s Setting up libfabric1:amd64 (2.1.0-1.1) ... 57s Setting up libice6:amd64 (2:1.1.1-1) ... 57s Setting up mesa-libgallium:amd64 (25.2.3-1ubuntu1) ... 57s Setting up liblapack3:amd64 (3.12.1-6build1) ... 57s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 57s Setting up libgsl-dev (2.8+dfsg-5.1ubuntu1) ... 57s Setting up libopenblas0-pthread:amd64 (0.3.30+ds-3) ... 57s update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 57s update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 57s update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/x86_64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-x86_64-linux-gnu) in auto mode 57s Setting up python3-pysam (0.23.0+ds-1build1) ... 57s Setting up libatk1.0-0t64:amd64 (2.57.1-1) ... 57s Setting up libgbm1:amd64 (25.2.3-1ubuntu1) ... 57s Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10build1) ... 57s Setting up fontconfig-config (2.15.0-2.3ubuntu1) ... 57s Setting up python3-pytest (8.4.2-1) ... 57s Setting up libxtst6:amd64 (2:1.2.5-1) ... 57s Setting up libxcursor1:amd64 (1:1.2.3-1) ... 57s Setting up libgl1-mesa-dri:amd64 (25.2.3-1ubuntu1) ... 57s Setting up bcftools (1.21-1) ... 57s Setting up libcommons-parent-java (56-1) ... 57s Setting up libavahi-common3:amd64 (0.8-16ubuntu3) ... 57s Setting up libcommons-logging-java (1.3.0-1ubuntu1) ... 57s Setting up dconf-service (0.40.0-5willsync1) ... 57s Setting up libnss3:amd64 (2:3.114-1) ... 57s Setting up libpaper-utils (2.2.5-0.3) ... 57s Setting up libxom-java (1.3.9-1) ... 57s Setting up libhwloc-plugins:amd64 (2.12.2-1) ... 57s Setting up samtools (1.21-1) ... 57s Setting up libcommons-jexl2-java (2.1.1-6) ... 57s Setting up libthai0:amd64 (0.1.29-2build1) ... 57s Setting up libmbedx509-7:amd64 (3.6.2-3ubuntu1) ... 57s Setting up libcommons-collections4-java (4.4-2) ... 57s Setting up libcommons-lang3-java (3.17.0-1) ... 57s Setting up libmbedtls21:amd64 (3.6.2-3ubuntu1) ... 57s Setting up libopenblas0:amd64 (0.3.30+ds-3) ... 57s Setting up libtiff6:amd64 (4.7.0-3ubuntu3) ... 57s Setting up libwayland-cursor0:amd64 (1.24.0-1build1) ... 57s Setting up libcommons-beanutils-java (1.10.1-1.1) ... 57s Setting up libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-5) ... 57s Setting up libsnappy-java (1.1.10.7-1) ... 57s Setting up libfontconfig1:amd64 (2.15.0-2.3ubuntu1) ... 57s Setting up libcommons-codec-java (1.18.0-1) ... 57s Setting up libsm6:amd64 (2:1.2.6-1) ... 57s Setting up libavahi-client3:amd64 (0.8-16ubuntu3) ... 57s Setting up libhsakmt1:amd64 (6.2.4+ds-1) ... 57s Setting up libopenblas-pthread-dev:amd64 (0.3.30+ds-3) ... 57s update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode 57s update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode 57s update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so to provide /usr/lib/x86_64-linux-gnu/libopenblas.so (libopenblas.so-x86_64-linux-gnu) in auto mode 57s Setting up libatk-bridge2.0-0t64:amd64 (2.57.1-1) ... 57s Setting up gtk-update-icon-cache (4.20.1+ds-2) ... 57s Setting up fontconfig (2.15.0-2.3ubuntu1) ... 59s Regenerating fonts cache... done. 59s Setting up libxft2:amd64 (2.3.6-1build1) ... 59s Setting up libglx-mesa0:amd64 (25.2.3-1ubuntu1) ... 59s Setting up openjdk-21-jre-headless:amd64 (21.0.9~8ea-1) ... 59s update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode 59s update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode 59s update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode 59s update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode 59s update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode 59s Setting up libglx0:amd64 (1.7.0-1build2) ... 59s Setting up dconf-gsettings-backend:amd64 (0.40.0-5willsync1) ... 59s Setting up libcommons-io-java (2.19.0-1) ... 59s Setting up libtk8.6:amd64 (8.6.17-1) ... 59s Setting up libpango-1.0-0:amd64 (1.56.3-1build1) ... 59s Setting up libncbi-vdb3:amd64 (3.2.1+dfsg-2) ... 59s Setting up libcairo2:amd64 (1.18.4-1build1) ... 59s Setting up libopenblas-dev:amd64 (0.3.30+ds-3) ... 59s Setting up libgl1:amd64 (1.7.0-1build2) ... 59s Setting up adwaita-icon-theme (49.0-1) ... 59s update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode 59s Setting up libxt6t64:amd64 (1:1.2.1-1.3) ... 59s Setting up libhttpclient-java (4.5.14-1) ... 59s Setting up libhsa-runtime64-1:amd64 (6.1.2-3) ... 59s Setting up liblightcouch-java (0.2.0-1) ... 59s Setting up libcairo-gobject2:amd64 (1.18.4-1build1) ... 59s Setting up libpangoft2-1.0-0:amd64 (1.56.3-1build1) ... 59s Setting up libcups2t64:amd64 (2.4.12-0ubuntu3) ... 59s Setting up libgtk-3-common (3.24.50-1ubuntu2) ... 59s Setting up libpangocairo-1.0-0:amd64 (1.56.3-1build1) ... 59s Setting up libncbi-ngs3:amd64 (3.2.1+dfsg-4ubuntu5) ... 59s Setting up libngs-jni:amd64 (3.2.1+dfsg-4ubuntu5) ... 59s Setting up libcommons-compress-java (1.27.1-2) ... 59s Setting up liblog4j2-java (2.19.0-2) ... 59s Setting up libamdhip64-5:amd64 (5.7.1-6) ... 59s Setting up r-base-core (4.5.1-1) ... 59s Creating config file /etc/R/Renviron with new version 59s Setting up r-cran-labeling (0.4.3-1) ... 59s Setting up r-cran-lattice (0.22-7-1) ... 59s Setting up r-cran-nlme (3.1.168-1) ... 59s Setting up r-cran-farver (2.1.2-1) ... 59s Setting up r-cran-viridislite (0.4.2-2) ... 59s Setting up libngs-java:amd64 (3.2.1+dfsg-4ubuntu5) ... 59s Setting up r-cran-r6 (2.6.1-1) ... 59s Setting up r-cran-pkgkitten (0.2.4-1) ... 59s Setting up r-cran-magrittr (2.0.3-1) ... 59s Setting up libbarclay-java (5.0.0+dfsg-1) ... 59s Setting up r-cran-littler (0.3.21-1) ... 59s Setting up r-cran-rcpp (1.1.0-1) ... 59s Setting up r-cran-codetools (0.2-20-1) ... 59s Setting up r-cran-inline (0.3.21-1) ... 59s Setting up libucx0:amd64 (1.19.0+ds-1) ... 59s Setting up r-cran-rlang (1.1.5-3) ... 59s Setting up r-cran-withr (3.0.2+dfsg-1) ... 59s Setting up r-cran-iterators (1.0.14-1) ... 59s Setting up r-cran-foreach (1.5.2-1) ... 59s Setting up r-cran-fansi (1.0.6-2) ... 59s Setting up r-cran-mass (7.3-65-1) ... 59s Setting up r-cran-glue (1.8.0-1) ... 59s Setting up r-cran-gam (1.22-5-1) ... 59s Setting up r-cran-cli (3.6.4-1) ... 59s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 59s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 59s Setting up r-cran-utf8 (1.2.4-1) ... 59s Setting up r-cran-colorspace (2.1-1+dfsg-1) ... 59s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 59s Setting up r-cran-isoband (0.2.7-1) ... 59s Setting up r-cran-gtable (0.3.6+dfsg-1) ... 59s Setting up r-cran-matrix (1.7-3-1) ... 59s Setting up r-cran-mgcv (1.9-3-1) ... 59s Setting up r-cran-rcppgsl (0.3.13-1build1) ... 59s Setting up r-cran-vctrs (0.6.5-1) ... 59s Setting up r-cran-pillar (1.10.1+dfsg-1) ... 59s Setting up libopenmpi40:amd64 (5.0.8-8ubuntu1) ... 59s Setting up r-cran-munsell (0.5.1-1) ... 59s Setting up r-cran-tibble (3.2.1+dfsg-3) ... 59s Setting up r-cran-scales (1.3.0-1) ... 59s Setting up openmpi-bin (5.0.8-8ubuntu1) ... 59s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 59s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 59s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 59s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 59s Setting up mpi-default-bin (1.18) ... 59s Setting up mapdamage (2.2.2+dfsg-1) ... 60s Setting up examl (3.0.22-6build1) ... 60s Processing triggers for libc-bin (2.42-0ubuntu3) ... 60s Processing triggers for man-db (2.13.1-1) ... 60s Processing triggers for libglib2.0-0t64:amd64 (2.86.0-2) ... 60s Setting up libgtk-3-0t64:amd64 (3.24.50-1ubuntu2) ... 60s Processing triggers for install-info (7.1.1-1ubuntu1) ... 60s Processing triggers for ca-certificates-java (20240118) ... 61s Adding debian:ACCVRAIZ1.pem 61s Adding debian:AC_RAIZ_FNMT-RCM.pem 61s Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem 61s Adding debian:ANF_Secure_Server_Root_CA.pem 61s Adding debian:Actalis_Authentication_Root_CA.pem 61s Adding debian:AffirmTrust_Commercial.pem 61s Adding debian:AffirmTrust_Networking.pem 61s Adding debian:AffirmTrust_Premium.pem 61s Adding debian:AffirmTrust_Premium_ECC.pem 61s Adding debian:Amazon_Root_CA_1.pem 61s Adding debian:Amazon_Root_CA_2.pem 61s Adding debian:Amazon_Root_CA_3.pem 61s Adding debian:Amazon_Root_CA_4.pem 61s Adding debian:Atos_TrustedRoot_2011.pem 61s Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem 61s Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem 61s Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem 61s Adding debian:BJCA_Global_Root_CA1.pem 61s Adding debian:BJCA_Global_Root_CA2.pem 61s Adding debian:Baltimore_CyberTrust_Root.pem 61s Adding debian:Buypass_Class_2_Root_CA.pem 61s Adding debian:Buypass_Class_3_Root_CA.pem 61s Adding debian:CA_Disig_Root_R2.pem 61s Adding debian:CFCA_EV_ROOT.pem 61s Adding debian:COMODO_Certification_Authority.pem 61s Adding debian:COMODO_ECC_Certification_Authority.pem 61s Adding debian:COMODO_RSA_Certification_Authority.pem 61s Adding debian:Certainly_Root_E1.pem 61s Adding debian:Certainly_Root_R1.pem 61s Adding debian:Certigna.pem 61s Adding debian:Certigna_Root_CA.pem 61s Adding debian:Certum_EC-384_CA.pem 61s Adding debian:Certum_Trusted_Network_CA.pem 61s Adding debian:Certum_Trusted_Network_CA_2.pem 61s Adding debian:Certum_Trusted_Root_CA.pem 61s Adding debian:CommScope_Public_Trust_ECC_Root-01.pem 61s Adding debian:CommScope_Public_Trust_ECC_Root-02.pem 61s Adding debian:CommScope_Public_Trust_RSA_Root-01.pem 61s Adding debian:CommScope_Public_Trust_RSA_Root-02.pem 61s Adding debian:Comodo_AAA_Services_root.pem 61s Adding debian:D-TRUST_BR_Root_CA_1_2020.pem 61s Adding debian:D-TRUST_BR_Root_CA_2_2023.pem 61s Adding debian:D-TRUST_EV_Root_CA_1_2020.pem 61s Adding debian:D-TRUST_EV_Root_CA_2_2023.pem 61s Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem 61s Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem 61s Adding debian:DigiCert_Assured_ID_Root_CA.pem 61s Adding debian:DigiCert_Assured_ID_Root_G2.pem 61s Adding debian:DigiCert_Assured_ID_Root_G3.pem 61s Adding debian:DigiCert_Global_Root_CA.pem 61s Adding debian:DigiCert_Global_Root_G2.pem 61s Adding debian:DigiCert_Global_Root_G3.pem 61s Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem 61s Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem 61s Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem 61s Adding debian:DigiCert_Trusted_Root_G4.pem 61s Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem 61s Adding debian:Entrust_Root_Certification_Authority.pem 61s Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem 61s Adding debian:Entrust_Root_Certification_Authority_-_G2.pem 61s Adding debian:FIRMAPROFESIONAL_CA_ROOT-A_WEB.pem 61s Adding debian:GDCA_TrustAUTH_R5_ROOT.pem 61s Adding debian:GLOBALTRUST_2020.pem 61s Adding debian:GTS_Root_R1.pem 61s Adding debian:GTS_Root_R2.pem 61s Adding debian:GTS_Root_R3.pem 61s Adding debian:GTS_Root_R4.pem 61s Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem 61s Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem 61s Adding debian:GlobalSign_Root_CA.pem 61s Adding debian:GlobalSign_Root_CA_-_R3.pem 61s Adding debian:GlobalSign_Root_CA_-_R6.pem 61s Adding debian:GlobalSign_Root_E46.pem 61s Adding debian:GlobalSign_Root_R46.pem 61s Adding debian:Go_Daddy_Class_2_CA.pem 61s Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem 61s Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem 61s Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem 61s Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem 61s Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem 61s Adding debian:HiPKI_Root_CA_-_G1.pem 61s Adding debian:Hongkong_Post_Root_CA_3.pem 61s Adding debian:ISRG_Root_X1.pem 61s Adding debian:ISRG_Root_X2.pem 61s Adding debian:IdenTrust_Commercial_Root_CA_1.pem 61s Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem 61s Adding debian:Izenpe.com.pem 61s Adding debian:Microsec_e-Szigno_Root_CA_2009.pem 61s Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem 61s Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem 61s Adding debian:NAVER_Global_Root_Certification_Authority.pem 61s Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem 61s Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem 61s Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem 61s Adding debian:QuoVadis_Root_CA_1_G3.pem 61s Adding debian:QuoVadis_Root_CA_2.pem 61s Adding debian:QuoVadis_Root_CA_2_G3.pem 61s Adding debian:QuoVadis_Root_CA_3.pem 61s Adding debian:QuoVadis_Root_CA_3_G3.pem 61s Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem 61s Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem 61s Adding debian:SSL.com_Root_Certification_Authority_ECC.pem 61s Adding debian:SSL.com_Root_Certification_Authority_RSA.pem 61s Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem 61s Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem 61s Adding debian:SZAFIR_ROOT_CA2.pem 61s Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem 61s Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem 61s Adding debian:SecureSign_Root_CA12.pem 61s Adding debian:SecureSign_Root_CA14.pem 61s Adding debian:SecureSign_Root_CA15.pem 61s Adding debian:SecureTrust_CA.pem 61s Adding debian:Secure_Global_CA.pem 61s Adding debian:Security_Communication_ECC_RootCA1.pem 61s Adding debian:Security_Communication_RootCA2.pem 61s Adding debian:Starfield_Class_2_CA.pem 61s Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem 61s Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem 61s Adding debian:SwissSign_Gold_CA_-_G2.pem 61s Adding debian:T-TeleSec_GlobalRoot_Class_2.pem 61s Adding debian:T-TeleSec_GlobalRoot_Class_3.pem 61s Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem 61s Adding debian:TWCA_CYBER_Root_CA.pem 61s Adding debian:TWCA_Global_Root_CA.pem 61s Adding debian:TWCA_Root_Certification_Authority.pem 61s Adding debian:Telekom_Security_TLS_ECC_Root_2020.pem 61s Adding debian:Telekom_Security_TLS_RSA_Root_2023.pem 61s Adding debian:TeliaSonera_Root_CA_v1.pem 61s Adding debian:Telia_Root_CA_v2.pem 61s Adding debian:TrustAsia_Global_Root_CA_G3.pem 61s Adding debian:TrustAsia_Global_Root_CA_G4.pem 61s Adding debian:Trustwave_Global_Certification_Authority.pem 61s Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem 61s Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem 61s Adding debian:TunTrust_Root_CA.pem 61s Adding debian:UCA_Extended_Validation_Root.pem 61s Adding debian:UCA_Global_G2_Root.pem 61s Adding debian:USERTrust_ECC_Certification_Authority.pem 61s Adding debian:USERTrust_RSA_Certification_Authority.pem 61s Adding debian:XRamp_Global_CA_Root.pem 61s Adding debian:certSIGN_ROOT_CA.pem 61s Adding debian:certSIGN_Root_CA_G2.pem 61s Adding debian:e-Szigno_Root_CA_2017.pem 61s Adding debian:ePKI_Root_Certification_Authority.pem 61s Adding debian:emSign_ECC_Root_CA_-_C3.pem 61s Adding debian:emSign_ECC_Root_CA_-_G3.pem 61s Adding debian:emSign_Root_CA_-_C1.pem 61s Adding debian:emSign_Root_CA_-_G1.pem 61s Adding debian:vTrus_ECC_Root_CA.pem 61s Adding debian:vTrus_Root_CA.pem 61s done. 61s Setting up junit4 (4.13.2-5) ... 61s Setting up default-jre-headless (2:1.21-76) ... 61s Setting up openjdk-21-jre:amd64 (21.0.9~8ea-1) ... 61s Setting up libjson-java (3.1.0+dfsg-2) ... 61s Setting up libhtsjdk-java (4.1.3+dfsg-2) ... 61s Setting up libgkl-java (0.8.11+dfsg-2build1) ... 61s Setting up default-jre (2:1.21-76) ... 61s Setting up libpicard-java (3.3.0+dfsg-2) ... 61s Setting up picard-tools (3.3.0+dfsg-2) ... 61s Setting up paleomix (1.3.8-2) ... 61s Processing triggers for libc-bin (2.42-0ubuntu3) ... 62s autopkgtest [19:57:58]: test run-unit-test: [----------------------- 62s ============================= test session starts ============================== 62s platform linux -- Python 3.13.7, pytest-8.4.2, pluggy-1.6.0 62s rootdir: /tmp/autopkgtest.GrhfJk/autopkgtest_tmp 62s plugins: typeguard-4.4.2 62s collected 1387 items 62s 62s tests/atomiccmd_test/builder_test.py ................................... [ 2%] 62s ...................................................... [ 6%] 63s tests/atomiccmd_test/command_test.py ................................... [ 8%] 63s ........................................................................ [ 14%] 63s ................ [ 15%] 63s tests/atomiccmd_test/pprint_test.py .................................... [ 17%] 63s .. [ 18%] 63s tests/atomiccmd_test/sets_test.py ...................................... [ 20%] 63s ............ [ 21%] 63s tests/common_tests/bedtools_test.py ............................... [ 23%] 63s tests/common_tests/formats_tests/fasta_test.py ......................... [ 25%] 63s ............. [ 26%] 63s tests/common_tests/formats_tests/fastq_test.py ......................... [ 28%] 63s ........... [ 29%] 63s tests/common_tests/formats_tests/msa_test.py ........................... [ 31%] 63s ................... [ 32%] 63s tests/common_tests/formats_tests/newick_test.py ........................ [ 34%] 64s ........................................................................ [ 39%] 64s ...... [ 39%] 64s tests/common_tests/formats_tests/phylip_test.py ........ [ 40%] 64s tests/common_tests/makefile_test.py .................................... [ 43%] 64s ........................................................................ [ 48%] 64s ........................................................................ [ 53%] 64s ........................................................................ [ 58%] 64s ........................................................................ [ 63%] 64s ............................... [ 66%] 64s tests/common_tests/sampling_test.py ........................ [ 67%] 64s tests/common_tests/sequences_test.py ................................... [ 70%] 64s ............... [ 71%] 64s tests/common_tests/text_test.py ....................................... [ 74%] 64s tests/common_tests/utilities_test.py ................................... [ 76%] 64s ........................................................................ [ 81%] 64s .. [ 82%] 64s tests/common_tests/versions_test.py .................................... [ 84%] 64s ............................................................ [ 88%] 64s tests/node_test.py ..................................................... [ 92%] 64s ....................................... [ 95%] 64s tests/nodegraph_test.py ......... [ 96%] 68s tests/tools_test/factory_test.py XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [ 99%] 68s XXXXXXXXXXXXX [100%] 68s 68s =============================== warnings summary =============================== 68s tests/tools_test/factory_test.py:64 68s /tmp/autopkgtest.GrhfJk/autopkgtest_tmp/tests/tools_test/factory_test.py:64: PytestUnknownMarkWarning: Unknown pytest.mark.slow - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html 68s @pytest.mark.slow 68s 68s tests/tools_test/factory_test.py:74 68s /tmp/autopkgtest.GrhfJk/autopkgtest_tmp/tests/tools_test/factory_test.py:74: PytestUnknownMarkWarning: Unknown pytest.mark.slow - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html 68s @pytest.mark.slow 68s 68s tests/tools_test/factory_test.py:88 68s /tmp/autopkgtest.GrhfJk/autopkgtest_tmp/tests/tools_test/factory_test.py:88: PytestUnknownMarkWarning: Unknown pytest.mark.slow - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html 68s @pytest.mark.slow 68s 68s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 68s ================= 1335 passed, 52 xpassed, 3 warnings in 6.35s ================= 69s autopkgtest [19:58:05]: test run-unit-test: -----------------------] 69s autopkgtest [19:58:05]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 69s run-unit-test PASS 69s autopkgtest [19:58:05]: @@@@@@@@@@@@@@@@@@@@ summary 69s run-unit-test PASS