0s autopkgtest [04:53:33]: starting date and time: 2025-11-14 04:53:33+0000 0s autopkgtest [04:53:33]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [04:53:33]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.sse1y0ti/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:numpy --apt-upgrade multiqc --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=numpy/1:2.3.4+ds-3ubuntu1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-amd64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@sto01-7.secgroup --name adt-resolute-amd64-multiqc-20251114-045332-juju-7f2275-prod-proposed-migration-environment-20-02b2bc19-4c55-4857-a90d-9866a5704a0b --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-autopkgtest-workers-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 3s Creating nova instance adt-resolute-amd64-multiqc-20251114-045332-juju-7f2275-prod-proposed-migration-environment-20-02b2bc19-4c55-4857-a90d-9866a5704a0b from image adt/ubuntu-resolute-amd64-server-20251113.img (UUID d44790b8-9c68-4bcd-ba8f-9a124f30eed8)... 36s autopkgtest [04:54:09]: testbed dpkg architecture: amd64 36s autopkgtest [04:54:09]: testbed apt version: 3.1.11 37s autopkgtest [04:54:10]: @@@@@@@@@@@@@@@@@@@@ test bed setup 37s autopkgtest [04:54:10]: testbed release detected to be: None 37s autopkgtest [04:54:10]: updating testbed package index (apt update) 38s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [87.8 kB] 38s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 38s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 38s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 38s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [22.4 kB] 38s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [83.2 kB] 38s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [787 kB] 38s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [9848 B] 38s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [160 kB] 38s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [117 kB] 38s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [3120 B] 38s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted i386 Packages [3744 B] 38s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 Packages [64.6 kB] 38s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [336 B] 38s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [477 kB] 38s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [236 kB] 38s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [16.0 kB] 38s Get:18 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [5984 B] 39s Get:19 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [12.9 kB] 39s Get:20 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [628 B] 39s Fetched 2088 kB in 1s (2128 kB/s) 40s Reading package lists... 40s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 40s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 40s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 40s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 41s Reading package lists... 41s Reading package lists... 41s Building dependency tree... 41s Reading state information... 41s Calculating upgrade... 41s The following packages will be upgraded: 41s 3cpio cron cron-daemon-common fwupd libcap2 libcap2-bin libfwupd3 libpam-cap 41s liburcu8t64 libxml2-16 lto-disabled-list 41s 11 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 41s Need to get 7045 kB of archives. 41s After this operation, 53.2 kB of additional disk space will be used. 41s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 cron amd64 3.0pl1-200ubuntu1 [88.6 kB] 41s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 libcap2 amd64 1:2.75-10ubuntu1 [31.1 kB] 41s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libpam-cap amd64 1:2.75-10ubuntu1 [12.7 kB] 41s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 libcap2-bin amd64 1:2.75-10ubuntu1 [33.5 kB] 41s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 libxml2-16 amd64 2.15.1+dfsg-0.3 [632 kB] 41s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 cron-daemon-common all 3.0pl1-200ubuntu1 [15.7 kB] 41s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 liburcu8t64 amd64 0.15.5-1 [64.2 kB] 41s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 3cpio amd64 0.12.0-1ubuntu1 [286 kB] 41s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 fwupd amd64 2.0.17-6 [5730 kB] 41s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 libfwupd3 amd64 2.0.17-6 [139 kB] 41s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 lto-disabled-list all 72 [12.4 kB] 42s dpkg-preconfigure: unable to re-open stdin: No such file or directory 42s Fetched 7045 kB in 0s (18.1 MB/s) 42s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82963 files and directories currently installed.) 42s Preparing to unpack .../cron_3.0pl1-200ubuntu1_amd64.deb ... 42s Unpacking cron (3.0pl1-200ubuntu1) over (3.0pl1-196ubuntu2) ... 42s Preparing to unpack .../libcap2_1%3a2.75-10ubuntu1_amd64.deb ... 42s Unpacking libcap2:amd64 (1:2.75-10ubuntu1) over (1:2.75-7ubuntu2) ... 42s Setting up libcap2:amd64 (1:2.75-10ubuntu1) ... 42s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82963 files and directories currently installed.) 42s Preparing to unpack .../0-libpam-cap_1%3a2.75-10ubuntu1_amd64.deb ... 42s Unpacking libpam-cap:amd64 (1:2.75-10ubuntu1) over (1:2.75-7ubuntu2) ... 42s Preparing to unpack .../1-libcap2-bin_1%3a2.75-10ubuntu1_amd64.deb ... 42s Unpacking libcap2-bin (1:2.75-10ubuntu1) over (1:2.75-7ubuntu2) ... 42s Preparing to unpack .../2-libxml2-16_2.15.1+dfsg-0.3_amd64.deb ... 42s Unpacking libxml2-16:amd64 (2.15.1+dfsg-0.3) over (2.14.5+dfsg-0.2build1) ... 42s Preparing to unpack .../3-cron-daemon-common_3.0pl1-200ubuntu1_all.deb ... 42s Unpacking cron-daemon-common (3.0pl1-200ubuntu1) over (3.0pl1-196ubuntu2) ... 42s Preparing to unpack .../4-liburcu8t64_0.15.5-1_amd64.deb ... 42s Unpacking liburcu8t64:amd64 (0.15.5-1) over (0.15.4-1) ... 42s Preparing to unpack .../5-3cpio_0.12.0-1ubuntu1_amd64.deb ... 42s Unpacking 3cpio (0.12.0-1ubuntu1) over (0.11.0-2ubuntu2) ... 42s Preparing to unpack .../6-fwupd_2.0.17-6_amd64.deb ... 42s Unpacking fwupd (2.0.17-6) over (2.0.17-2) ... 42s Preparing to unpack .../7-libfwupd3_2.0.17-6_amd64.deb ... 42s Unpacking libfwupd3:amd64 (2.0.17-6) over (2.0.17-2) ... 42s Preparing to unpack .../8-lto-disabled-list_72_all.deb ... 42s Unpacking lto-disabled-list (72) over (71) ... 42s Setting up liburcu8t64:amd64 (0.15.5-1) ... 42s Setting up 3cpio (0.12.0-1ubuntu1) ... 42s Setting up lto-disabled-list (72) ... 42s Setting up libxml2-16:amd64 (2.15.1+dfsg-0.3) ... 42s Setting up libfwupd3:amd64 (2.0.17-6) ... 43s Setting up libcap2-bin (1:2.75-10ubuntu1) ... 43s Setting up libpam-cap:amd64 (1:2.75-10ubuntu1) ... 43s Setting up fwupd (2.0.17-6) ... 43s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 43s fwupd.service is a disabled or a static unit not running, not starting it. 43s Setting up cron-daemon-common (3.0pl1-200ubuntu1) ... 43s Setting up cron (3.0pl1-200ubuntu1) ... 43s Processing triggers for dbus (1.16.2-2ubuntu2) ... 43s Processing triggers for libc-bin (2.42-2ubuntu2) ... 43s Processing triggers for man-db (2.13.1-1) ... 44s autopkgtest [04:54:17]: upgrading testbed (apt dist-upgrade and autopurge) 44s Reading package lists... 44s Building dependency tree... 44s Reading state information... 45s Calculating upgrade... 45s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 45s Reading package lists... 45s Building dependency tree... 45s Reading state information... 45s Solving dependencies... 45s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 45s autopkgtest [04:54:18]: rebooting testbed after setup commands that affected boot 72s autopkgtest [04:54:45]: testbed running kernel: Linux 6.17.0-5-generic #5-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 22 10:00:33 UTC 2025 74s autopkgtest [04:54:47]: @@@@@@@@@@@@@@@@@@@@ apt-source multiqc 78s Get:1 http://ftpmaster.internal/ubuntu resolute/universe multiqc 1.21+dfsg-2 (dsc) [2772 B] 78s Get:2 http://ftpmaster.internal/ubuntu resolute/universe multiqc 1.21+dfsg-2 (tar) [17.0 MB] 78s Get:3 http://ftpmaster.internal/ubuntu resolute/universe multiqc 1.21+dfsg-2 (tar) [1937 kB] 78s Get:4 http://ftpmaster.internal/ubuntu resolute/universe multiqc 1.21+dfsg-2 (diff) [11.9 kB] 78s gpgv: Signature made Sat Aug 31 11:27:49 2024 UTC 78s gpgv: using RSA key 8F6DE104377F3B11E741748731F3144544A1741A 78s gpgv: issuer "tchet@debian.org" 78s gpgv: Can't check signature: No public key 78s dpkg-source: warning: cannot verify inline signature for ./multiqc_1.21+dfsg-2.dsc: no acceptable signature found 78s autopkgtest [04:54:51]: testing package multiqc version 1.21+dfsg-2 79s autopkgtest [04:54:52]: build not needed 80s autopkgtest [04:54:53]: test run-unit-test: preparing testbed 80s Reading package lists... 80s Building dependency tree... 80s Reading state information... 80s Solving dependencies... 81s The following NEW packages will be installed: 81s blt fontconfig-config fonts-dejavu-core fonts-dejavu-mono 81s fonts-glyphicons-halflings fonts-lyx libblas3 libdeflate0 libfontconfig1 81s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libimagequant0 libjbig0 81s libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-jquery libjs-jquery-metadata 81s libjs-jquery-tablesorter libjs-jquery-ui liblapack3 liblcms2-2 liblerc4 81s libopenjp2-7 libqhull-r8.0 libraqm0 libsharpyuv0 libtcl8.6 libtiff6 libtk8.6 81s libwebp7 libwebpdemux2 libwebpmux3 libxft2 libxrender1 libxslt1.1 libxss1 81s libzopfli1 multiqc python-matplotlib-data python3-brotli python3-click 81s python3-coloredlogs python3-colormath python3-contourpy python3-cycler 81s python3-decorator python3-fastjsonschema python3-fonttools python3-fs 81s python3-humanfriendly python3-humanize python3-importlib-metadata 81s python3-jupyter-core python3-kiwisolver python3-lxml python3-lz4 81s python3-lzstring python3-markdown python3-matplotlib python3-mpmath 81s python3-nbformat python3-networkx python3-numpy python3-numpy-dev 81s python3-pil python3-pil.imagetk python3-platformdirs python3-plotly 81s python3-pyaml-env python3-pytz python3-rich-click python3-scipy 81s python3-spectra python3-sympy python3-tenacity python3-tk python3-traitlets 81s python3-tz python3-ufolib2 python3-unicodedata2 python3-zopfli python3.13-tk 81s python3.14-tk tk8.6-blt2.5 unicode-data x11-common 81s 0 upgraded, 89 newly installed, 0 to remove and 0 not upgraded. 81s Need to get 96.8 MB of archives. 81s After this operation, 495 MB of additional disk space will be used. 81s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-numpy-dev amd64 1:2.3.4+ds-3ubuntu1 [147 kB] 81s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7 [259 kB] 81s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 15.2.0-7ubuntu1 [939 kB] 81s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7 [2739 kB] 82s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-numpy amd64 1:2.3.4+ds-3ubuntu1 [8126 kB] 83s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libtcl8.6 amd64 8.6.17+dfsg-1 [1036 kB] 83s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 83s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 83s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 fontconfig-config amd64 2.15.0-2.3ubuntu1 [38.0 kB] 83s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 libfontconfig1 amd64 2.15.0-2.3ubuntu1 [141 kB] 83s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libxrender1 amd64 1:0.9.12-1 [19.8 kB] 83s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB] 83s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 x11-common all 1:7.7+24ubuntu1 [22.4 kB] 83s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B] 83s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libtk8.6 amd64 8.6.17-1 [823 kB] 83s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-8 [694 kB] 83s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 blt amd64 2.5.3+dfsg-8 [4824 B] 83s Get:18 http://ftpmaster.internal/ubuntu resolute/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-6 [119 kB] 83s Get:19 http://ftpmaster.internal/ubuntu resolute/universe amd64 fonts-lyx all 2.4.4-2 [171 kB] 83s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 libdeflate0 amd64 1.23-2 [49.9 kB] 83s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 15.2.0-7ubuntu1 [151 kB] 83s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 83s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 libharfbuzz0b amd64 12.1.0-1 [535 kB] 83s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 libimagequant0 amd64 2.18.0-1build1 [36.3 kB] 83s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8 amd64 2.1.5-4ubuntu2 [152 kB] 83s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 83s Get:27 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-bootstrap all 3.4.1+dfsg-6 [129 kB] 83s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 83s Get:29 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-metadata all 12-4 [6582 B] 83s Get:30 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-tablesorter all 1:2.31.3+dfsg1-4 [192 kB] 83s Get:31 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 83s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 liblcms2-2 amd64 2.16-2 [212 kB] 83s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 83s Get:34 http://ftpmaster.internal/ubuntu resolute/universe amd64 libqhull-r8.0 amd64 2020.2-7 [197 kB] 83s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 libraqm0 amd64 0.10.3-1 [15.4 kB] 83s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 83s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 83s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 83s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libtiff6 amd64 4.7.0-3ubuntu3 [209 kB] 83s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebpdemux2 amd64 1.5.0-0.1 [13.0 kB] 83s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 libwebpmux3 amd64 1.5.0-0.1 [27.6 kB] 83s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 libxslt1.1 amd64 1.1.43-0.3 [172 kB] 83s Get:43 http://ftpmaster.internal/ubuntu resolute/universe amd64 libzopfli1 amd64 1.0.3-3 [141 kB] 83s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-click all 8.2.0+0.really.8.1.8-1 [80.0 kB] 83s Get:45 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-humanfriendly all 10.0-6 [70.8 kB] 83s Get:46 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-coloredlogs all 15.0.1-1 [38.2 kB] 83s Get:47 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-humanize all 4.12.1-1 [58.3 kB] 83s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-importlib-metadata all 8.7.0-2 [21.0 kB] 83s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-markdown all 3.8.2-2 [75.2 kB] 83s Get:50 http://ftpmaster.internal/ubuntu resolute/universe amd64 python-matplotlib-data all 3.10.7+dfsg1-1 [2930 kB] 83s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 libopenjp2-7 amd64 2.5.3-2.1 [188 kB] 83s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-pil amd64 11.3.0-1ubuntu2 [504 kB] 83s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.14-tk amd64 3.14.0-4 [108 kB] 83s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.13-tk amd64 3.13.9-1 [108 kB] 83s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-tk amd64 3.13.9-1 [8946 B] 83s Get:56 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pil.imagetk amd64 11.3.0-1ubuntu2 [9804 B] 83s Get:57 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-contourpy amd64 1.3.1-2 [255 kB] 83s Get:58 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-cycler all 0.12.1-2 [9850 B] 83s Get:59 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-brotli amd64 1.1.0-2build6 [340 kB] 83s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-platformdirs all 4.3.7-1 [16.9 kB] 83s Get:61 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-fs all 2.4.16-8ubuntu1 [91.1 kB] 83s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-lxml amd64 6.0.2-1 [2333 kB] 84s Get:63 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-lz4 amd64 4.4.4+dfsg-3 [27.5 kB] 84s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-decorator all 5.2.1-2 [28.1 kB] 84s Get:65 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-scipy amd64 1.15.3-1ubuntu1 [20.3 MB] 84s Get:66 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-mpmath all 1.3.0-2 [423 kB] 84s Get:67 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-sympy all 1.14.0-2 [4306 kB] 84s Get:68 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-ufolib2 all 0.17.1+dfsg1-1 [33.5 kB] 84s Get:69 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-unicodedata2 amd64 16.0.0+ds-1build1 [400 kB] 84s Get:70 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-zopfli amd64 0.4.0-1 [11.1 kB] 84s Get:71 http://ftpmaster.internal/ubuntu resolute/universe amd64 unicode-data all 16.0.0-1 [9513 kB] 85s Get:72 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-fonttools amd64 4.57.0-2build1 [1731 kB] 85s Get:73 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-kiwisolver amd64 1.4.10~rc0-1 [65.5 kB] 85s Get:74 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-matplotlib amd64 3.10.7+dfsg1-1 [17.2 MB] 85s Get:75 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-pytz all 2025.2-4 [32.3 kB] 85s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-tz all 2025.2-4 [1746 B] 85s Get:77 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-fastjsonschema all 2.21.1-1 [20.4 kB] 85s Get:78 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-traitlets all 5.14.3+really5.14.3-1 [71.5 kB] 85s Get:79 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-jupyter-core all 5.7.2-5 [28.1 kB] 85s Get:80 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-nbformat all 5.9.1-1 [41.2 kB] 85s Get:81 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-tenacity all 9.0.0-0ubuntu1 [17.0 kB] 85s Get:82 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-plotly all 5.20.0+dfsg-1 [2766 kB] 85s Get:83 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pyaml-env all 1.2.1-2 [9090 B] 85s Get:84 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-rich-click all 1.6.0-2 [18.0 kB] 85s Get:85 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-networkx all 3.2.1-4ubuntu1 [11.5 MB] 85s Get:86 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-colormath all 3.0.0-4 [36.6 kB] 85s Get:87 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-spectra all 0.1.0-1 [17.2 kB] 85s Get:88 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-lzstring all 1.0.4-3 [6262 B] 85s Get:89 http://ftpmaster.internal/ubuntu resolute/universe amd64 multiqc all 1.21+dfsg-2 [733 kB] 86s Fetched 96.8 MB in 5s (20.6 MB/s) 86s Selecting previously unselected package python3-numpy-dev:amd64. 86s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82962 files and directories currently installed.) 86s Preparing to unpack .../00-python3-numpy-dev_1%3a2.3.4+ds-3ubuntu1_amd64.deb ... 86s Unpacking python3-numpy-dev:amd64 (1:2.3.4+ds-3ubuntu1) ... 86s Selecting previously unselected package libblas3:amd64. 86s Preparing to unpack .../01-libblas3_3.12.1-7_amd64.deb ... 86s Unpacking libblas3:amd64 (3.12.1-7) ... 86s Selecting previously unselected package libgfortran5:amd64. 86s Preparing to unpack .../02-libgfortran5_15.2.0-7ubuntu1_amd64.deb ... 86s Unpacking libgfortran5:amd64 (15.2.0-7ubuntu1) ... 86s Selecting previously unselected package liblapack3:amd64. 86s Preparing to unpack .../03-liblapack3_3.12.1-7_amd64.deb ... 86s Unpacking liblapack3:amd64 (3.12.1-7) ... 86s Selecting previously unselected package python3-numpy. 86s Preparing to unpack .../04-python3-numpy_1%3a2.3.4+ds-3ubuntu1_amd64.deb ... 86s Unpacking python3-numpy (1:2.3.4+ds-3ubuntu1) ... 86s Selecting previously unselected package libtcl8.6:amd64. 86s Preparing to unpack .../05-libtcl8.6_8.6.17+dfsg-1_amd64.deb ... 86s Unpacking libtcl8.6:amd64 (8.6.17+dfsg-1) ... 86s Selecting previously unselected package fonts-dejavu-mono. 86s Preparing to unpack .../06-fonts-dejavu-mono_2.37-8_all.deb ... 86s Unpacking fonts-dejavu-mono (2.37-8) ... 86s Selecting previously unselected package fonts-dejavu-core. 86s Preparing to unpack .../07-fonts-dejavu-core_2.37-8_all.deb ... 86s Unpacking fonts-dejavu-core (2.37-8) ... 86s Selecting previously unselected package fontconfig-config. 86s Preparing to unpack .../08-fontconfig-config_2.15.0-2.3ubuntu1_amd64.deb ... 86s Unpacking fontconfig-config (2.15.0-2.3ubuntu1) ... 86s Selecting previously unselected package libfontconfig1:amd64. 86s Preparing to unpack .../09-libfontconfig1_2.15.0-2.3ubuntu1_amd64.deb ... 86s Unpacking libfontconfig1:amd64 (2.15.0-2.3ubuntu1) ... 86s Selecting previously unselected package libxrender1:amd64. 86s Preparing to unpack .../10-libxrender1_1%3a0.9.12-1_amd64.deb ... 86s Unpacking libxrender1:amd64 (1:0.9.12-1) ... 86s Selecting previously unselected package libxft2:amd64. 86s Preparing to unpack .../11-libxft2_2.3.6-1build1_amd64.deb ... 86s Unpacking libxft2:amd64 (2.3.6-1build1) ... 86s Selecting previously unselected package x11-common. 86s Preparing to unpack .../12-x11-common_1%3a7.7+24ubuntu1_all.deb ... 86s Unpacking x11-common (1:7.7+24ubuntu1) ... 86s Selecting previously unselected package libxss1:amd64. 86s Preparing to unpack .../13-libxss1_1%3a1.2.3-1build3_amd64.deb ... 86s Unpacking libxss1:amd64 (1:1.2.3-1build3) ... 86s Selecting previously unselected package libtk8.6:amd64. 86s Preparing to unpack .../14-libtk8.6_8.6.17-1_amd64.deb ... 86s Unpacking libtk8.6:amd64 (8.6.17-1) ... 86s Selecting previously unselected package tk8.6-blt2.5. 86s Preparing to unpack .../15-tk8.6-blt2.5_2.5.3+dfsg-8_amd64.deb ... 86s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-8) ... 86s Selecting previously unselected package blt. 86s Preparing to unpack .../16-blt_2.5.3+dfsg-8_amd64.deb ... 86s Unpacking blt (2.5.3+dfsg-8) ... 86s Selecting previously unselected package fonts-glyphicons-halflings. 86s Preparing to unpack .../17-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-6_all.deb ... 86s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ... 86s Selecting previously unselected package fonts-lyx. 86s Preparing to unpack .../18-fonts-lyx_2.4.4-2_all.deb ... 86s Unpacking fonts-lyx (2.4.4-2) ... 86s Selecting previously unselected package libdeflate0:amd64. 86s Preparing to unpack .../19-libdeflate0_1.23-2_amd64.deb ... 86s Unpacking libdeflate0:amd64 (1.23-2) ... 86s Selecting previously unselected package libgomp1:amd64. 86s Preparing to unpack .../20-libgomp1_15.2.0-7ubuntu1_amd64.deb ... 86s Unpacking libgomp1:amd64 (15.2.0-7ubuntu1) ... 86s Selecting previously unselected package libgraphite2-3:amd64. 86s Preparing to unpack .../21-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 86s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 86s Selecting previously unselected package libharfbuzz0b:amd64. 86s Preparing to unpack .../22-libharfbuzz0b_12.1.0-1_amd64.deb ... 86s Unpacking libharfbuzz0b:amd64 (12.1.0-1) ... 86s Selecting previously unselected package libimagequant0:amd64. 86s Preparing to unpack .../23-libimagequant0_2.18.0-1build1_amd64.deb ... 86s Unpacking libimagequant0:amd64 (2.18.0-1build1) ... 86s Selecting previously unselected package libjpeg-turbo8:amd64. 86s Preparing to unpack .../24-libjpeg-turbo8_2.1.5-4ubuntu2_amd64.deb ... 86s Unpacking libjpeg-turbo8:amd64 (2.1.5-4ubuntu2) ... 86s Selecting previously unselected package libjpeg8:amd64. 86s Preparing to unpack .../25-libjpeg8_8c-2ubuntu11_amd64.deb ... 86s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 86s Selecting previously unselected package libjs-bootstrap. 86s Preparing to unpack .../26-libjs-bootstrap_3.4.1+dfsg-6_all.deb ... 86s Unpacking libjs-bootstrap (3.4.1+dfsg-6) ... 86s Selecting previously unselected package libjs-jquery. 86s Preparing to unpack .../27-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 86s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 86s Selecting previously unselected package libjs-jquery-metadata. 86s Preparing to unpack .../28-libjs-jquery-metadata_12-4_all.deb ... 86s Unpacking libjs-jquery-metadata (12-4) ... 86s Selecting previously unselected package libjs-jquery-tablesorter. 86s Preparing to unpack .../29-libjs-jquery-tablesorter_1%3a2.31.3+dfsg1-4_all.deb ... 86s Unpacking libjs-jquery-tablesorter (1:2.31.3+dfsg1-4) ... 86s Selecting previously unselected package libjs-jquery-ui. 86s Preparing to unpack .../30-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 86s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 86s Selecting previously unselected package liblcms2-2:amd64. 86s Preparing to unpack .../31-liblcms2-2_2.16-2_amd64.deb ... 86s Unpacking liblcms2-2:amd64 (2.16-2) ... 86s Selecting previously unselected package liblerc4:amd64. 86s Preparing to unpack .../32-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ... 86s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 86s Selecting previously unselected package libqhull-r8.0:amd64. 86s Preparing to unpack .../33-libqhull-r8.0_2020.2-7_amd64.deb ... 86s Unpacking libqhull-r8.0:amd64 (2020.2-7) ... 86s Selecting previously unselected package libraqm0:amd64. 86s Preparing to unpack .../34-libraqm0_0.10.3-1_amd64.deb ... 86s Unpacking libraqm0:amd64 (0.10.3-1) ... 86s Selecting previously unselected package libsharpyuv0:amd64. 86s Preparing to unpack .../35-libsharpyuv0_1.5.0-0.1_amd64.deb ... 86s Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ... 86s Selecting previously unselected package libjbig0:amd64. 86s Preparing to unpack .../36-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 86s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 86s Selecting previously unselected package libwebp7:amd64. 86s Preparing to unpack .../37-libwebp7_1.5.0-0.1_amd64.deb ... 86s Unpacking libwebp7:amd64 (1.5.0-0.1) ... 86s Selecting previously unselected package libtiff6:amd64. 86s Preparing to unpack .../38-libtiff6_4.7.0-3ubuntu3_amd64.deb ... 86s Unpacking libtiff6:amd64 (4.7.0-3ubuntu3) ... 86s Selecting previously unselected package libwebpdemux2:amd64. 86s Preparing to unpack .../39-libwebpdemux2_1.5.0-0.1_amd64.deb ... 86s Unpacking libwebpdemux2:amd64 (1.5.0-0.1) ... 86s Selecting previously unselected package libwebpmux3:amd64. 86s Preparing to unpack .../40-libwebpmux3_1.5.0-0.1_amd64.deb ... 86s Unpacking libwebpmux3:amd64 (1.5.0-0.1) ... 86s Selecting previously unselected package libxslt1.1:amd64. 86s Preparing to unpack .../41-libxslt1.1_1.1.43-0.3_amd64.deb ... 86s Unpacking libxslt1.1:amd64 (1.1.43-0.3) ... 86s Selecting previously unselected package libzopfli1. 86s Preparing to unpack .../42-libzopfli1_1.0.3-3_amd64.deb ... 86s Unpacking libzopfli1 (1.0.3-3) ... 86s Selecting previously unselected package python3-click. 86s Preparing to unpack .../43-python3-click_8.2.0+0.really.8.1.8-1_all.deb ... 86s Unpacking python3-click (8.2.0+0.really.8.1.8-1) ... 86s Selecting previously unselected package python3-humanfriendly. 86s Preparing to unpack .../44-python3-humanfriendly_10.0-6_all.deb ... 86s Unpacking python3-humanfriendly (10.0-6) ... 86s Selecting previously unselected package python3-coloredlogs. 86s Preparing to unpack .../45-python3-coloredlogs_15.0.1-1_all.deb ... 86s Unpacking python3-coloredlogs (15.0.1-1) ... 86s Selecting previously unselected package python3-humanize. 86s Preparing to unpack .../46-python3-humanize_4.12.1-1_all.deb ... 86s Unpacking python3-humanize (4.12.1-1) ... 86s Selecting previously unselected package python3-importlib-metadata. 86s Preparing to unpack .../47-python3-importlib-metadata_8.7.0-2_all.deb ... 86s Unpacking python3-importlib-metadata (8.7.0-2) ... 86s Selecting previously unselected package python3-markdown. 86s Preparing to unpack .../48-python3-markdown_3.8.2-2_all.deb ... 86s Unpacking python3-markdown (3.8.2-2) ... 86s Selecting previously unselected package python-matplotlib-data. 86s Preparing to unpack .../49-python-matplotlib-data_3.10.7+dfsg1-1_all.deb ... 86s Unpacking python-matplotlib-data (3.10.7+dfsg1-1) ... 87s Selecting previously unselected package libopenjp2-7:amd64. 87s Preparing to unpack .../50-libopenjp2-7_2.5.3-2.1_amd64.deb ... 87s Unpacking libopenjp2-7:amd64 (2.5.3-2.1) ... 87s Selecting previously unselected package python3-pil:amd64. 87s Preparing to unpack .../51-python3-pil_11.3.0-1ubuntu2_amd64.deb ... 87s Unpacking python3-pil:amd64 (11.3.0-1ubuntu2) ... 87s Selecting previously unselected package python3.14-tk. 87s Preparing to unpack .../52-python3.14-tk_3.14.0-4_amd64.deb ... 87s Unpacking python3.14-tk (3.14.0-4) ... 87s Selecting previously unselected package python3.13-tk. 87s Preparing to unpack .../53-python3.13-tk_3.13.9-1_amd64.deb ... 87s Unpacking python3.13-tk (3.13.9-1) ... 87s Selecting previously unselected package python3-tk:amd64. 87s Preparing to unpack .../54-python3-tk_3.13.9-1_amd64.deb ... 87s Unpacking python3-tk:amd64 (3.13.9-1) ... 87s Selecting previously unselected package python3-pil.imagetk:amd64. 87s Preparing to unpack .../55-python3-pil.imagetk_11.3.0-1ubuntu2_amd64.deb ... 87s Unpacking python3-pil.imagetk:amd64 (11.3.0-1ubuntu2) ... 87s Selecting previously unselected package python3-contourpy. 87s Preparing to unpack .../56-python3-contourpy_1.3.1-2_amd64.deb ... 87s Unpacking python3-contourpy (1.3.1-2) ... 87s Selecting previously unselected package python3-cycler. 87s Preparing to unpack .../57-python3-cycler_0.12.1-2_all.deb ... 87s Unpacking python3-cycler (0.12.1-2) ... 87s Selecting previously unselected package python3-brotli. 87s Preparing to unpack .../58-python3-brotli_1.1.0-2build6_amd64.deb ... 87s Unpacking python3-brotli (1.1.0-2build6) ... 87s Selecting previously unselected package python3-platformdirs. 87s Preparing to unpack .../59-python3-platformdirs_4.3.7-1_all.deb ... 87s Unpacking python3-platformdirs (4.3.7-1) ... 87s Selecting previously unselected package python3-fs. 87s Preparing to unpack .../60-python3-fs_2.4.16-8ubuntu1_all.deb ... 87s Unpacking python3-fs (2.4.16-8ubuntu1) ... 87s Selecting previously unselected package python3-lxml:amd64. 87s Preparing to unpack .../61-python3-lxml_6.0.2-1_amd64.deb ... 87s Unpacking python3-lxml:amd64 (6.0.2-1) ... 87s Selecting previously unselected package python3-lz4. 87s Preparing to unpack .../62-python3-lz4_4.4.4+dfsg-3_amd64.deb ... 87s Unpacking python3-lz4 (4.4.4+dfsg-3) ... 87s Selecting previously unselected package python3-decorator. 87s Preparing to unpack .../63-python3-decorator_5.2.1-2_all.deb ... 87s Unpacking python3-decorator (5.2.1-2) ... 87s Selecting previously unselected package python3-scipy. 87s Preparing to unpack .../64-python3-scipy_1.15.3-1ubuntu1_amd64.deb ... 87s Unpacking python3-scipy (1.15.3-1ubuntu1) ... 87s Selecting previously unselected package python3-mpmath. 87s Preparing to unpack .../65-python3-mpmath_1.3.0-2_all.deb ... 87s Unpacking python3-mpmath (1.3.0-2) ... 87s Selecting previously unselected package python3-sympy. 87s Preparing to unpack .../66-python3-sympy_1.14.0-2_all.deb ... 87s Unpacking python3-sympy (1.14.0-2) ... 87s Selecting previously unselected package python3-ufolib2. 87s Preparing to unpack .../67-python3-ufolib2_0.17.1+dfsg1-1_all.deb ... 87s Unpacking python3-ufolib2 (0.17.1+dfsg1-1) ... 87s Selecting previously unselected package python3-unicodedata2. 87s Preparing to unpack .../68-python3-unicodedata2_16.0.0+ds-1build1_amd64.deb ... 87s Unpacking python3-unicodedata2 (16.0.0+ds-1build1) ... 87s Selecting previously unselected package python3-zopfli. 87s Preparing to unpack .../69-python3-zopfli_0.4.0-1_amd64.deb ... 87s Unpacking python3-zopfli (0.4.0-1) ... 87s Selecting previously unselected package unicode-data. 87s Preparing to unpack .../70-unicode-data_16.0.0-1_all.deb ... 87s Unpacking unicode-data (16.0.0-1) ... 87s Selecting previously unselected package python3-fonttools. 87s Preparing to unpack .../71-python3-fonttools_4.57.0-2build1_amd64.deb ... 87s Unpacking python3-fonttools (4.57.0-2build1) ... 87s Selecting previously unselected package python3-kiwisolver. 87s Preparing to unpack .../72-python3-kiwisolver_1.4.10~rc0-1_amd64.deb ... 87s Unpacking python3-kiwisolver (1.4.10~rc0-1) ... 87s Selecting previously unselected package python3-matplotlib. 87s Preparing to unpack .../73-python3-matplotlib_3.10.7+dfsg1-1_amd64.deb ... 87s Unpacking python3-matplotlib (3.10.7+dfsg1-1) ... 88s Selecting previously unselected package python3-pytz. 88s Preparing to unpack .../74-python3-pytz_2025.2-4_all.deb ... 88s Unpacking python3-pytz (2025.2-4) ... 88s Selecting previously unselected package python3-tz. 88s Preparing to unpack .../75-python3-tz_2025.2-4_all.deb ... 88s Unpacking python3-tz (2025.2-4) ... 88s Selecting previously unselected package python3-fastjsonschema. 88s Preparing to unpack .../76-python3-fastjsonschema_2.21.1-1_all.deb ... 88s Unpacking python3-fastjsonschema (2.21.1-1) ... 88s Selecting previously unselected package python3-traitlets. 88s Preparing to unpack .../77-python3-traitlets_5.14.3+really5.14.3-1_all.deb ... 88s Unpacking python3-traitlets (5.14.3+really5.14.3-1) ... 88s Selecting previously unselected package python3-jupyter-core. 88s Preparing to unpack .../78-python3-jupyter-core_5.7.2-5_all.deb ... 88s Unpacking python3-jupyter-core (5.7.2-5) ... 88s Selecting previously unselected package python3-nbformat. 88s Preparing to unpack .../79-python3-nbformat_5.9.1-1_all.deb ... 88s Unpacking python3-nbformat (5.9.1-1) ... 88s Selecting previously unselected package python3-tenacity. 88s Preparing to unpack .../80-python3-tenacity_9.0.0-0ubuntu1_all.deb ... 88s Unpacking python3-tenacity (9.0.0-0ubuntu1) ... 88s Selecting previously unselected package python3-plotly. 88s Preparing to unpack .../81-python3-plotly_5.20.0+dfsg-1_all.deb ... 88s Unpacking python3-plotly (5.20.0+dfsg-1) ... 88s Selecting previously unselected package python3-pyaml-env. 88s Preparing to unpack .../82-python3-pyaml-env_1.2.1-2_all.deb ... 88s Unpacking python3-pyaml-env (1.2.1-2) ... 88s Selecting previously unselected package python3-rich-click. 88s Preparing to unpack .../83-python3-rich-click_1.6.0-2_all.deb ... 88s Unpacking python3-rich-click (1.6.0-2) ... 88s Selecting previously unselected package python3-networkx. 88s Preparing to unpack .../84-python3-networkx_3.2.1-4ubuntu1_all.deb ... 88s Unpacking python3-networkx (3.2.1-4ubuntu1) ... 88s Selecting previously unselected package python3-colormath. 88s Preparing to unpack .../85-python3-colormath_3.0.0-4_all.deb ... 88s Unpacking python3-colormath (3.0.0-4) ... 88s Selecting previously unselected package python3-spectra. 88s Preparing to unpack .../86-python3-spectra_0.1.0-1_all.deb ... 88s Unpacking python3-spectra (0.1.0-1) ... 88s Selecting previously unselected package python3-lzstring. 88s Preparing to unpack .../87-python3-lzstring_1.0.4-3_all.deb ... 88s Unpacking python3-lzstring (1.0.4-3) ... 88s Selecting previously unselected package multiqc. 88s Preparing to unpack .../88-multiqc_1.21+dfsg-2_all.deb ... 88s Unpacking multiqc (1.21+dfsg-2) ... 88s Setting up libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 88s Setting up liblcms2-2:amd64 (2.16-2) ... 88s Setting up libsharpyuv0:amd64 (1.5.0-0.1) ... 88s Setting up liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 88s Setting up python3-importlib-metadata (8.7.0-2) ... 88s Setting up libxrender1:amd64 (1:0.9.12-1) ... 88s Setting up python3-lz4 (4.4.4+dfsg-3) ... 88s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-6) ... 88s Setting up python3-unicodedata2 (16.0.0+ds-1build1) ... 88s Setting up fonts-lyx (2.4.4-2) ... 88s Setting up python3-tenacity (9.0.0-0ubuntu1) ... 89s Setting up x11-common (1:7.7+24ubuntu1) ... 89s Setting up libdeflate0:amd64 (1.23-2) ... 89s Setting up libqhull-r8.0:amd64 (2020.2-7) ... 89s Setting up python3-pytz (2025.2-4) ... 89s Setting up libgomp1:amd64 (15.2.0-7ubuntu1) ... 89s Setting up python3-click (8.2.0+0.really.8.1.8-1) ... 89s Setting up python3-networkx (3.2.1-4ubuntu1) ... 90s Setting up libjbig0:amd64 (2.1-6.1ubuntu2) ... 90s Setting up python3-platformdirs (4.3.7-1) ... 90s Setting up python3-tz (2025.2-4) ... 90s Setting up python3-fs (2.4.16-8ubuntu1) ... 90s Setting up unicode-data (16.0.0-1) ... 90s Setting up python3-decorator (5.2.1-2) ... 90s Setting up libblas3:amd64 (3.12.1-7) ... 90s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 90s Setting up python3-pyaml-env (1.2.1-2) ... 90s /usr/lib/python3/dist-packages/pyaml_env/parse_config.py:58: SyntaxWarning: invalid escape sequence '\w' 90s type_tag_pattern = re.compile(f'({type_tag}\w+\s)') 90s Setting up libzopfli1 (1.0.3-3) ... 90s Setting up python3-humanfriendly (10.0-6) ... 90s Setting up python3-brotli (1.1.0-2build6) ... 90s Setting up python3-cycler (0.12.1-2) ... 90s Setting up libimagequant0:amd64 (2.18.0-1build1) ... 90s Setting up fonts-dejavu-mono (2.37-8) ... 90s Setting up python3-kiwisolver (1.4.10~rc0-1) ... 90s Setting up python3-numpy-dev:amd64 (1:2.3.4+ds-3ubuntu1) ... 90s Setting up python3-markdown (3.8.2-2) ... 90s Setting up libtcl8.6:amd64 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up libjs-bootstrap (3.4.1+dfsg-6) ... 91s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 91s Setting up python3-sympy (1.14.0-2) ... 94s Setting up liblapack3:amd64 (3.12.1-7) ... 94s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 94s Setting up fontconfig-config (2.15.0-2.3ubuntu1) ... 95s Setting up libwebpdemux2:amd64 (1.5.0-0.1) ... 95s Setting up python3-nbformat (5.9.1-1) ... 95s Setting up python3-zopfli (0.4.0-1) ... 95s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 95s Setting up libjs-jquery-metadata (12-4) ... 95s Setting up libraqm0:amd64 (0.10.3-1) ... 95s Setting up python3-plotly (5.20.0+dfsg-1) ... 98s Setting up python3-numpy (1:2.3.4+ds-3ubuntu1) ... 99s Setting up python3-colormath (3.0.0-4) ... 99s /usr/lib/python3/dist-packages/colormath/chromatic_adaptation.py:85: SyntaxWarning: invalid escape sequence '\*' 99s logger.debug(" \* Applying adaptation matrix: %s", adaptation) 99s /usr/lib/python3/dist-packages/colormath/color_appearance_models.py:692: SyntaxWarning: invalid escape sequence '\s' 99s :param sigma: Relative luminance parameter :math:`\sigma`. For average surround set :math:`\sigma=1/2.3`, 99s /usr/lib/python3/dist-packages/colormath/color_appearance_models.py:798: SyntaxWarning: invalid escape sequence '\s' 99s :param sigma: :math:`\sigma` 99s /usr/lib/python3/dist-packages/colormath/color_conversions.py:40: SyntaxWarning: invalid escape sequence '\*' 99s logger.debug(" \* Applying RGB conversion matrix: %s->%s", 99s /usr/lib/python3/dist-packages/colormath/color_conversions.py:488: SyntaxWarning: invalid escape sequence '\-' 99s logger.debug(" \- Target RGB space: %s", target_rgb) 99s /usr/lib/python3/dist-packages/colormath/color_conversions.py:490: SyntaxWarning: invalid escape sequence '\-' 99s logger.debug(" \- Target native illuminant: %s", target_illum) 99s /usr/lib/python3/dist-packages/colormath/color_conversions.py:491: SyntaxWarning: invalid escape sequence '\-' 99s logger.debug(" \- XYZ color's illuminant: %s", cobj.illuminant) 99s /usr/lib/python3/dist-packages/colormath/color_conversions.py:497: SyntaxWarning: invalid escape sequence '\*' 99s logger.debug(" \* Applying transformation from %s to %s ", 99s /usr/lib/python3/dist-packages/colormath/color_conversions.py:503: SyntaxWarning: invalid escape sequence '\*' 99s logger.debug(" \* New values: %.3f, %.3f, %.3f", 99s /usr/lib/python3/dist-packages/colormath/color_objects.py:452: SyntaxWarning: invalid escape sequence '\-' 99s logger.debug(" \- Original illuminant: %s", self.illuminant) 99s /usr/lib/python3/dist-packages/colormath/color_objects.py:453: SyntaxWarning: invalid escape sequence '\-' 99s logger.debug(" \- Target illuminant: %s", target_illuminant) 99s /usr/lib/python3/dist-packages/colormath/color_objects.py:459: SyntaxWarning: invalid escape sequence '\*' 99s logger.debug(" \* Applying transformation from %s to %s ", 99s Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-4) ... 99s Setting up python3-lxml:amd64 (6.0.2-1) ... 99s Setting up libtiff6:amd64 (4.7.0-3ubuntu3) ... 99s Setting up python3-contourpy (1.3.1-2) ... 99s Setting up libfontconfig1:amd64 (2.15.0-2.3ubuntu1) ... 99s Setting up libxft2:amd64 (2.3.6-1build1) ... 99s Setting up python3-scipy (1.15.3-1ubuntu1) ... 101s Setting up python3-spectra (0.1.0-1) ... 101s Setting up libtk8.6:amd64 (8.6.17-1) ... 101s Setting up python3.13-tk (3.13.9-1) ... 101s Setting up python3-pil:amd64 (11.3.0-1ubuntu2) ... 101s Setting up tk8.6-blt2.5 (2.5.3+dfsg-8) ... 101s Setting up python3.14-tk (3.14.0-4) ... 101s Setting up blt (2.5.3+dfsg-8) ... 101s Setting up python3-tk:amd64 (3.13.9-1) ... 101s Setting up python3-pil.imagetk:amd64 (11.3.0-1ubuntu2) ... 101s Setting up python3-fonttools (4.57.0-2build1) ... 102s Setting up python3-ufolib2 (0.17.1+dfsg1-1) ... 102s Setting up python3-matplotlib (3.10.7+dfsg1-1) ... 103s Setting up multiqc (1.21+dfsg-2) ... 103s Processing triggers for libc-bin (2.42-2ubuntu2) ... 103s Processing triggers for man-db (2.13.1-1) ... 105s autopkgtest [04:55:18]: test run-unit-test: [----------------------- 105s 105s /// MultiQC 🔍 | v1.21 105s 105s Usage: multiqc [OPTIONS] [ANALYSIS DIRECTORY] 105s 105s MultiQC aggregates results from bioinformatics analyses across many samples 105s into a single report. 105s It searches a given directory for analysis logs and compiles a HTML report. 105s It's a general use tool, perfect for summarising the output from numerous 105s bioinformatics tools. 105s To run, supply with one or more directory to scan for analysis results. For 105s example, to run in the current working directory, use 'multiqc .' 105s 105s ╭─ Main options ───────────────────────────────────────────────────────────────╮ 105s │ --force -f Overwrite any existing reports │ 105s │ --config -c Specific config file to load, after those in MultiQC │ 105s │ dir / home dir / working dir. │ 105s │ (PATH) │ 105s │ --cl-config Specify MultiQC config YAML on the command line │ 105s │ (TEXT) │ 105s │ --filename -n Report filename. Use 'stdout' to print to standard │ 105s │ out. │ 105s │ (TEXT) │ 105s │ --outdir -o Create report in the specified output directory. │ 105s │ (TEXT) │ 105s │ --ignore -x Ignore analysis files (GLOB EXPRESSION) │ 105s │ --ignore-samples Ignore sample names (GLOB EXPRESSION) │ 105s │ --ignore-symlinks Ignore symlinked directories and files │ 105s │ --file-list -l Supply a file containing a list of file paths to be │ 105s │ searched, one per row │ 105s ╰──────────────────────────────────────────────────────────────────────────────╯ 105s ╭─ Choosing modules to run ────────────────────────────────────────────────────╮ 105s │ --module -m Use only this module. Can specify multiple times. │ 105s │ (MODULE NAME) │ 105s │ --exclude -e Do not use this module. Can specify multiple times. │ 105s │ (MODULE NAME) │ 105s ╰──────────────────────────────────────────────────────────────────────────────╯ 105s ╭─ Sample handling ────────────────────────────────────────────────────────────╮ 105s │ --dirs -d Prepend directory to sample names │ 105s │ --dirs-depth -dd Prepend n directories to sample names. Negative number │ 105s │ to take from start of path. │ 105s │ (INTEGER) │ 105s │ --fullnames -s Do not clean the sample names (leave as full file │ 105s │ name) │ 105s │ --fn_as_s_name Use the log filename as the sample name │ 105s │ --replace-names TSV file to rename sample names during report │ 105s │ generation │ 105s │ (PATH) │ 105s ╰──────────────────────────────────────────────────────────────────────────────╯ 105s ╭─ Report customisation ───────────────────────────────────────────────────────╮ 105s │ --title -i Report title. Printed as page header, used for │ 105s │ filename if not otherwise specified. │ 105s │ (TEXT) │ 105s │ --comment -b Custom comment, will be printed at the top of the │ 105s │ report. │ 105s │ (TEXT) │ 105s │ --template -t Report template to use. │ 105s │ (default|gathered|geo|highcharts|sections|simple) │ 105s │ --sample-names TSV file containing alternative sample names for │ 105s │ renaming buttons in the report │ 105s │ (PATH) │ 105s │ --sample-filters TSV file containing show/hide patterns for the report │ 105s │ (PATH) │ 105s │ --custom-css-file Custom CSS file to add to the final report (PATH) │ 105s ╰──────────────────────────────────────────────────────────────────────────────╯ 105s ╭─ Output files ───────────────────────────────────────────────────────────────╮ 105s │ --flat -fp Use only flat plots (static images) │ 105s │ --interactive -ip Use only interactive plots (in-browser Javascript) │ 105s │ --export -p Export plots as static images in addition to the report │ 105s │ --data-dir Force the parsed data directory to be created. │ 105s │ --no-data-dir Prevent the parsed data directory from being created. │ 105s │ --data-format -k Output parsed data in a different format. │ 105s │ (tsv|csv|json|yaml) │ 105s │ --zip-data-dir -z Compress the data directory. │ 105s │ --no-report Do not generate a report, only export data and plots │ 105s │ --pdf Creates PDF report with the 'simple' template. Requires │ 105s │ Pandoc to be installed. │ 105s ╰──────────────────────────────────────────────────────────────────────────────╯ 105s ╭─ MultiQC behaviour ──────────────────────────────────────────────────────────╮ 105s │ --verbose -v Increase output verbosity. (INTEGER RANGE) │ 105s │ --quiet -q Only show log warnings │ 105s │ --strict Don't catch exceptions, run additional code checks │ 105s │ to help development. │ 105s │ --development,--dev Development mode. Do not compress and minimise JS, │ 105s │ export uncompressed plot data │ 105s │ --require-logs Require all explicitly requested modules to have │ 105s │ log files. If not, MultiQC will exit with an error. │ 105s │ --profile-runtime Add analysis of how long MultiQC takes to run to │ 105s │ the report │ 105s │ --no-megaqc-upload Don't upload generated report to MegaQC, even if │ 105s │ MegaQC options are found │ 105s │ --no-ansi Disable coloured log output │ 105s │ --version Show the version and exit. │ 105s │ --help -h Show this message and exit. │ 105s ╰──────────────────────────────────────────────────────────────────────────────╯ 105s 105s See http://multiqc.info for more details. 105s 105s FIXME: The test data should be delivered in a separate binary package once freeze is over 105s 105s /// MultiQC 🔍 | v1.21 105s 106s | multiqc | MultiQC Version v1.32 now available! 106s | multiqc | Search path : /tmp/autopkgtest.Y2phAM/autopkgtest_tmp/data 106s | searching | ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 100% 121/121 106s | feature_counts | Found 8 reports 106s | star | Found 8 reports 106s | cutadapt | Found 16 reports 106s | fastqc | Found 32 reports 106s | multiqc | Report : multiqc_report.html 106s | multiqc | Data : multiqc_data 106s | multiqc | Could not include file 'assets/js/packages/jszip.min.js': [Errno 2] No such file or directory: '/tmp/tmpglcr61xg/assets/js/packages/jszip.min.js' 106s | multiqc | Could not include file 'assets/js/packages/plotly-2.27.0.min.js': [Errno 2] No such file or directory: '/tmp/tmpglcr61xg/assets/js/packages/plotly-2.27.0.min.js' 106s | multiqc | MultiQC complete 106s -e 106s PASS 106s 107s autopkgtest [04:55:20]: test run-unit-test: -----------------------] 107s run-unit-test PASS 107s autopkgtest [04:55:20]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 107s autopkgtest [04:55:20]: @@@@@@@@@@@@@@@@@@@@ summary 107s run-unit-test PASS