0s autopkgtest [04:14:31]: starting date and time: 2025-11-14 04:14:31+0000 0s autopkgtest [04:14:31]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [04:14:31]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.rff088mv/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:numpy --apt-upgrade h5sparse --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=numpy/1:2.3.4+ds-3ubuntu1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-amd64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@sto01-5.secgroup --name adt-resolute-amd64-h5sparse-20251114-041431-juju-7f2275-prod-proposed-migration-environment-2-7a2e32c5-b5e1-4061-b9b7-25cf51c6d4c8 --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-autopkgtest-workers-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 4s Creating nova instance adt-resolute-amd64-h5sparse-20251114-041431-juju-7f2275-prod-proposed-migration-environment-2-7a2e32c5-b5e1-4061-b9b7-25cf51c6d4c8 from image adt/ubuntu-resolute-amd64-server-20251113.img (UUID d44790b8-9c68-4bcd-ba8f-9a124f30eed8)... 44s autopkgtest [04:15:15]: testbed dpkg architecture: amd64 44s autopkgtest [04:15:15]: testbed apt version: 3.1.11 44s autopkgtest [04:15:15]: @@@@@@@@@@@@@@@@@@@@ test bed setup 45s autopkgtest [04:15:16]: testbed release detected to be: None 45s autopkgtest [04:15:16]: updating testbed package index (apt update) 46s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [87.8 kB] 46s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 46s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 46s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 46s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [83.2 kB] 46s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [9848 B] 46s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [22.4 kB] 46s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [787 kB] 46s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [117 kB] 46s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [160 kB] 46s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [3120 B] 46s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted i386 Packages [3744 B] 46s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 Packages [64.6 kB] 47s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [336 B] 47s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [477 kB] 47s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [236 kB] 47s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [16.0 kB] 47s Get:18 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [5984 B] 47s Get:19 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [12.9 kB] 47s Get:20 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [628 B] 47s Fetched 2088 kB in 1s (1925 kB/s) 48s Reading package lists... 49s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 49s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 49s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 49s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 49s Reading package lists... 49s Reading package lists... 49s Building dependency tree... 49s Reading state information... 50s Calculating upgrade... 50s The following packages will be upgraded: 50s 3cpio cron cron-daemon-common fwupd libcap2 libcap2-bin libfwupd3 libpam-cap 50s liburcu8t64 libxml2-16 lto-disabled-list 50s 11 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 50s Need to get 7045 kB of archives. 50s After this operation, 53.2 kB of additional disk space will be used. 50s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 cron amd64 3.0pl1-200ubuntu1 [88.6 kB] 50s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 libcap2 amd64 1:2.75-10ubuntu1 [31.1 kB] 50s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libpam-cap amd64 1:2.75-10ubuntu1 [12.7 kB] 50s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 libcap2-bin amd64 1:2.75-10ubuntu1 [33.5 kB] 50s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 libxml2-16 amd64 2.15.1+dfsg-0.3 [632 kB] 50s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 cron-daemon-common all 3.0pl1-200ubuntu1 [15.7 kB] 50s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 liburcu8t64 amd64 0.15.5-1 [64.2 kB] 50s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 3cpio amd64 0.12.0-1ubuntu1 [286 kB] 50s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 fwupd amd64 2.0.17-6 [5730 kB] 51s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 libfwupd3 amd64 2.0.17-6 [139 kB] 51s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 lto-disabled-list all 72 [12.4 kB] 51s dpkg-preconfigure: unable to re-open stdin: No such file or directory 51s Fetched 7045 kB in 1s (4918 kB/s) 51s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82963 files and directories currently installed.) 51s Preparing to unpack .../cron_3.0pl1-200ubuntu1_amd64.deb ... 52s Unpacking cron (3.0pl1-200ubuntu1) over (3.0pl1-196ubuntu2) ... 52s Preparing to unpack .../libcap2_1%3a2.75-10ubuntu1_amd64.deb ... 52s Unpacking libcap2:amd64 (1:2.75-10ubuntu1) over (1:2.75-7ubuntu2) ... 52s Setting up libcap2:amd64 (1:2.75-10ubuntu1) ... 52s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82963 files and directories currently installed.) 52s Preparing to unpack .../0-libpam-cap_1%3a2.75-10ubuntu1_amd64.deb ... 52s Unpacking libpam-cap:amd64 (1:2.75-10ubuntu1) over (1:2.75-7ubuntu2) ... 52s Preparing to unpack .../1-libcap2-bin_1%3a2.75-10ubuntu1_amd64.deb ... 52s Unpacking libcap2-bin (1:2.75-10ubuntu1) over (1:2.75-7ubuntu2) ... 52s Preparing to unpack .../2-libxml2-16_2.15.1+dfsg-0.3_amd64.deb ... 52s Unpacking libxml2-16:amd64 (2.15.1+dfsg-0.3) over (2.14.5+dfsg-0.2build1) ... 52s Preparing to unpack .../3-cron-daemon-common_3.0pl1-200ubuntu1_all.deb ... 52s Unpacking cron-daemon-common (3.0pl1-200ubuntu1) over (3.0pl1-196ubuntu2) ... 52s Preparing to unpack .../4-liburcu8t64_0.15.5-1_amd64.deb ... 52s Unpacking liburcu8t64:amd64 (0.15.5-1) over (0.15.4-1) ... 52s Preparing to unpack .../5-3cpio_0.12.0-1ubuntu1_amd64.deb ... 52s Unpacking 3cpio (0.12.0-1ubuntu1) over (0.11.0-2ubuntu2) ... 52s Preparing to unpack .../6-fwupd_2.0.17-6_amd64.deb ... 52s Unpacking fwupd (2.0.17-6) over (2.0.17-2) ... 52s Preparing to unpack .../7-libfwupd3_2.0.17-6_amd64.deb ... 52s Unpacking libfwupd3:amd64 (2.0.17-6) over (2.0.17-2) ... 52s Preparing to unpack .../8-lto-disabled-list_72_all.deb ... 52s Unpacking lto-disabled-list (72) over (71) ... 52s Setting up liburcu8t64:amd64 (0.15.5-1) ... 52s Setting up 3cpio (0.12.0-1ubuntu1) ... 52s Setting up lto-disabled-list (72) ... 52s Setting up libxml2-16:amd64 (2.15.1+dfsg-0.3) ... 52s Setting up libfwupd3:amd64 (2.0.17-6) ... 52s Setting up libcap2-bin (1:2.75-10ubuntu1) ... 52s Setting up libpam-cap:amd64 (1:2.75-10ubuntu1) ... 52s Setting up fwupd (2.0.17-6) ... 53s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 53s fwupd.service is a disabled or a static unit not running, not starting it. 53s Setting up cron-daemon-common (3.0pl1-200ubuntu1) ... 53s Setting up cron (3.0pl1-200ubuntu1) ... 53s Processing triggers for dbus (1.16.2-2ubuntu2) ... 53s Processing triggers for libc-bin (2.42-2ubuntu2) ... 53s Processing triggers for man-db (2.13.1-1) ... 54s autopkgtest [04:15:25]: upgrading testbed (apt dist-upgrade and autopurge) 54s Reading package lists... 55s Building dependency tree... 55s Reading state information... 55s Calculating upgrade... 55s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 55s Reading package lists... 55s Building dependency tree... 55s Reading state information... 55s Solving dependencies... 55s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 55s autopkgtest [04:15:26]: rebooting testbed after setup commands that affected boot 84s autopkgtest [04:15:55]: testbed running kernel: Linux 6.17.0-5-generic #5-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 22 10:00:33 UTC 2025 86s autopkgtest [04:15:57]: @@@@@@@@@@@@@@@@@@@@ apt-source h5sparse 87s Get:1 http://ftpmaster.internal/ubuntu resolute/universe h5sparse 0.1.0-8 (dsc) [2174 B] 87s Get:2 http://ftpmaster.internal/ubuntu resolute/universe h5sparse 0.1.0-8 (tar) [10.5 kB] 87s Get:3 http://ftpmaster.internal/ubuntu resolute/universe h5sparse 0.1.0-8 (diff) [4420 B] 87s gpgv: Signature made Thu Jan 16 20:35:49 2025 UTC 87s gpgv: using RSA key 8F6DE104377F3B11E741748731F3144544A1741A 87s gpgv: issuer "tchet@debian.org" 87s gpgv: Can't check signature: No public key 87s dpkg-source: warning: cannot verify inline signature for ./h5sparse_0.1.0-8.dsc: no acceptable signature found 87s autopkgtest [04:15:58]: testing package h5sparse version 0.1.0-8 87s autopkgtest [04:15:58]: build not needed 88s autopkgtest [04:15:59]: test run-unit-test: preparing testbed 88s Reading package lists... 88s Building dependency tree... 88s Reading state information... 88s Solving dependencies... 88s The following NEW packages will be installed: 88s libaec0 libblas3 libgfortran5 libhdf5-310 libhdf5-hl-310 liblapack3 liblzf1 88s libsz2 python3-all python3-decorator python3-h5py python3-h5py-serial 88s python3-h5sparse python3-iniconfig python3-numpy python3-numpy-dev 88s python3-pluggy python3-pytest python3-scipy 88s 0 upgraded, 19 newly installed, 0 to remove and 0 not upgraded. 88s Need to get 35.5 MB of archives. 88s After this operation, 183 MB of additional disk space will be used. 88s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-numpy-dev amd64 1:2.3.4+ds-3ubuntu1 [147 kB] 88s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7 [259 kB] 88s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 15.2.0-7ubuntu1 [939 kB] 89s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7 [2739 kB] 89s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-numpy amd64 1:2.3.4+ds-3ubuntu1 [8126 kB] 89s Get:6 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec0 amd64 1.1.4-2 [22.9 kB] 89s Get:7 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsz2 amd64 1.1.4-2 [5516 B] 89s Get:8 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-310 amd64 1.14.5+repack-4 [1432 kB] 89s Get:9 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-310 amd64 1.14.5+repack-4 [59.8 kB] 89s Get:10 http://ftpmaster.internal/ubuntu resolute/universe amd64 liblzf1 amd64 3.6-4 [7624 B] 89s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-all amd64 3.13.7-1 [884 B] 89s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-decorator all 5.2.1-2 [28.1 kB] 89s Get:13 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5py-serial amd64 3.13.0-1ubuntu1 [1184 kB] 89s Get:14 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5py all 3.13.0-1ubuntu1 [8230 B] 89s Get:15 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-scipy amd64 1.15.3-1ubuntu1 [20.3 MB] 89s Get:16 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5sparse all 0.1.0-8 [6866 B] 89s Get:17 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-iniconfig all 2.1.0-1 [6840 B] 89s Get:18 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pluggy all 1.6.0-1 [21.0 kB] 89s Get:19 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pytest all 8.3.5-2 [252 kB] 89s Fetched 35.5 MB in 1s (34.0 MB/s) 89s Selecting previously unselected package python3-numpy-dev:amd64. 90s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82962 files and directories currently installed.) 90s Preparing to unpack .../00-python3-numpy-dev_1%3a2.3.4+ds-3ubuntu1_amd64.deb ... 90s Unpacking python3-numpy-dev:amd64 (1:2.3.4+ds-3ubuntu1) ... 90s Selecting previously unselected package libblas3:amd64. 90s Preparing to unpack .../01-libblas3_3.12.1-7_amd64.deb ... 90s Unpacking libblas3:amd64 (3.12.1-7) ... 90s Selecting previously unselected package libgfortran5:amd64. 90s Preparing to unpack .../02-libgfortran5_15.2.0-7ubuntu1_amd64.deb ... 90s Unpacking libgfortran5:amd64 (15.2.0-7ubuntu1) ... 90s Selecting previously unselected package liblapack3:amd64. 90s Preparing to unpack .../03-liblapack3_3.12.1-7_amd64.deb ... 90s Unpacking liblapack3:amd64 (3.12.1-7) ... 90s Selecting previously unselected package python3-numpy. 90s Preparing to unpack .../04-python3-numpy_1%3a2.3.4+ds-3ubuntu1_amd64.deb ... 90s Unpacking python3-numpy (1:2.3.4+ds-3ubuntu1) ... 90s Selecting previously unselected package libaec0:amd64. 90s Preparing to unpack .../05-libaec0_1.1.4-2_amd64.deb ... 90s Unpacking libaec0:amd64 (1.1.4-2) ... 90s Selecting previously unselected package libsz2:amd64. 90s Preparing to unpack .../06-libsz2_1.1.4-2_amd64.deb ... 90s Unpacking libsz2:amd64 (1.1.4-2) ... 90s Selecting previously unselected package libhdf5-310:amd64. 90s Preparing to unpack .../07-libhdf5-310_1.14.5+repack-4_amd64.deb ... 90s Unpacking libhdf5-310:amd64 (1.14.5+repack-4) ... 90s Selecting previously unselected package libhdf5-hl-310:amd64. 90s Preparing to unpack .../08-libhdf5-hl-310_1.14.5+repack-4_amd64.deb ... 90s Unpacking libhdf5-hl-310:amd64 (1.14.5+repack-4) ... 90s Selecting previously unselected package liblzf1:amd64. 90s Preparing to unpack .../09-liblzf1_3.6-4_amd64.deb ... 90s Unpacking liblzf1:amd64 (3.6-4) ... 90s Selecting previously unselected package python3-all. 90s Preparing to unpack .../10-python3-all_3.13.7-1_amd64.deb ... 90s Unpacking python3-all (3.13.7-1) ... 90s Selecting previously unselected package python3-decorator. 90s Preparing to unpack .../11-python3-decorator_5.2.1-2_all.deb ... 90s Unpacking python3-decorator (5.2.1-2) ... 90s Selecting previously unselected package python3-h5py-serial. 90s Preparing to unpack .../12-python3-h5py-serial_3.13.0-1ubuntu1_amd64.deb ... 90s Unpacking python3-h5py-serial (3.13.0-1ubuntu1) ... 90s Selecting previously unselected package python3-h5py. 90s Preparing to unpack .../13-python3-h5py_3.13.0-1ubuntu1_all.deb ... 90s Unpacking python3-h5py (3.13.0-1ubuntu1) ... 90s Selecting previously unselected package python3-scipy. 90s Preparing to unpack .../14-python3-scipy_1.15.3-1ubuntu1_amd64.deb ... 90s Unpacking python3-scipy (1.15.3-1ubuntu1) ... 90s Selecting previously unselected package python3-h5sparse. 90s Preparing to unpack .../15-python3-h5sparse_0.1.0-8_all.deb ... 90s Unpacking python3-h5sparse (0.1.0-8) ... 90s Selecting previously unselected package python3-iniconfig. 90s Preparing to unpack .../16-python3-iniconfig_2.1.0-1_all.deb ... 90s Unpacking python3-iniconfig (2.1.0-1) ... 90s Selecting previously unselected package python3-pluggy. 90s Preparing to unpack .../17-python3-pluggy_1.6.0-1_all.deb ... 90s Unpacking python3-pluggy (1.6.0-1) ... 90s Selecting previously unselected package python3-pytest. 90s Preparing to unpack .../18-python3-pytest_8.3.5-2_all.deb ... 90s Unpacking python3-pytest (8.3.5-2) ... 90s Setting up python3-iniconfig (2.1.0-1) ... 90s Setting up python3-all (3.13.7-1) ... 90s Setting up libaec0:amd64 (1.1.4-2) ... 90s Setting up python3-decorator (5.2.1-2) ... 91s Setting up libblas3:amd64 (3.12.1-7) ... 91s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 91s Setting up liblzf1:amd64 (3.6-4) ... 91s Setting up python3-numpy-dev:amd64 (1:2.3.4+ds-3ubuntu1) ... 91s Setting up libgfortran5:amd64 (15.2.0-7ubuntu1) ... 91s Setting up python3-pluggy (1.6.0-1) ... 91s Setting up libsz2:amd64 (1.1.4-2) ... 91s Setting up liblapack3:amd64 (3.12.1-7) ... 91s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 91s Setting up python3-pytest (8.3.5-2) ... 91s Setting up python3-numpy (1:2.3.4+ds-3ubuntu1) ... 92s Setting up libhdf5-310:amd64 (1.14.5+repack-4) ... 92s Setting up libhdf5-hl-310:amd64 (1.14.5+repack-4) ... 92s Setting up python3-scipy (1.15.3-1ubuntu1) ... 94s Setting up python3-h5py-serial (3.13.0-1ubuntu1) ... 95s Setting up python3-h5py (3.13.0-1ubuntu1) ... 95s Setting up python3-h5sparse (0.1.0-8) ... 95s Processing triggers for libc-bin (2.42-2ubuntu2) ... 95s Processing triggers for man-db (2.13.1-1) ... 96s autopkgtest [04:16:07]: test run-unit-test: [----------------------- 96s ============================= test session starts ============================== 96s platform linux -- Python 3.13.9, pytest-8.3.5, pluggy-1.6.0 -- /usr/bin/python3.13 96s cachedir: .pytest_cache 96s rootdir: /tmp/autopkgtest.nD89yg/build.ARV/src 96s plugins: typeguard-4.4.2 97s collecting ... collected 8 items 97s 97s h5sparse/tests.py::test_create_and_read_dataset PASSED [ 12%] 97s h5sparse/tests.py::test_create_dataset_with_format_change PASSED [ 25%] 97s h5sparse/tests.py::test_create_empty_sparse_dataset PASSED [ 37%] 97s h5sparse/tests.py::test_create_dataset_from_dataset PASSED [ 50%] 97s h5sparse/tests.py::test_dataset_append PASSED [ 62%] 97s h5sparse/tests.py::test_numpy_array PASSED [ 75%] 97s h5sparse/tests.py::test_bytestring PASSED [ 87%] 97s h5sparse/tests.py::test_create_empty_dataset PASSED [100%] 97s 97s =============================== warnings summary =============================== 97s h5sparse/__init__.py:1 97s /tmp/autopkgtest.nD89yg/build.ARV/src/h5sparse/__init__.py:1: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html 97s import pkg_resources 97s 97s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 97s ========================= 8 passed, 1 warning in 0.28s ========================= 97s autopkgtest [04:16:08]: test run-unit-test: -----------------------] 97s autopkgtest [04:16:08]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 97s run-unit-test PASS 98s autopkgtest [04:16:09]: test autodep8-python3: preparing testbed 106s Creating nova instance adt-resolute-amd64-h5sparse-20251114-041431-juju-7f2275-prod-proposed-migration-environment-2-7a2e32c5-b5e1-4061-b9b7-25cf51c6d4c8 from image adt/ubuntu-resolute-amd64-server-20251113.img (UUID d44790b8-9c68-4bcd-ba8f-9a124f30eed8)... 147s autopkgtest [04:16:58]: testbed dpkg architecture: amd64 147s autopkgtest [04:16:58]: testbed apt version: 3.1.11 148s autopkgtest [04:16:59]: @@@@@@@@@@@@@@@@@@@@ test bed setup 148s autopkgtest [04:16:59]: testbed release detected to be: resolute 148s autopkgtest [04:16:59]: updating testbed package index (apt update) 149s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [87.8 kB] 149s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 149s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 149s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 149s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [9848 B] 149s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [83.2 kB] 149s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [22.4 kB] 149s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [787 kB] 149s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [160 kB] 149s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [117 kB] 149s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [3120 B] 149s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 Packages [64.6 kB] 150s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/restricted i386 Packages [3744 B] 150s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [336 B] 150s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [236 kB] 150s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [477 kB] 150s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [16.0 kB] 150s Get:18 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [12.9 kB] 150s Get:19 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [5984 B] 150s Get:20 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [628 B] 151s Fetched 2088 kB in 1s (1731 kB/s) 151s Reading package lists... 152s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 152s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 152s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 152s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 153s Reading package lists... 153s Reading package lists... 153s Building dependency tree... 153s Reading state information... 153s Calculating upgrade... 153s The following packages will be upgraded: 153s 3cpio cron cron-daemon-common fwupd libcap2 libcap2-bin libfwupd3 libpam-cap 153s liburcu8t64 libxml2-16 lto-disabled-list 153s 11 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 153s Need to get 7045 kB of archives. 153s After this operation, 53.2 kB of additional disk space will be used. 153s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 cron amd64 3.0pl1-200ubuntu1 [88.6 kB] 153s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 libcap2 amd64 1:2.75-10ubuntu1 [31.1 kB] 153s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libpam-cap amd64 1:2.75-10ubuntu1 [12.7 kB] 153s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 libcap2-bin amd64 1:2.75-10ubuntu1 [33.5 kB] 153s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 libxml2-16 amd64 2.15.1+dfsg-0.3 [632 kB] 153s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 cron-daemon-common all 3.0pl1-200ubuntu1 [15.7 kB] 153s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 liburcu8t64 amd64 0.15.5-1 [64.2 kB] 153s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 3cpio amd64 0.12.0-1ubuntu1 [286 kB] 153s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 fwupd amd64 2.0.17-6 [5730 kB] 155s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 libfwupd3 amd64 2.0.17-6 [139 kB] 155s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 lto-disabled-list all 72 [12.4 kB] 155s dpkg-preconfigure: unable to re-open stdin: No such file or directory 155s Fetched 7045 kB in 2s (4247 kB/s) 155s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82963 files and directories currently installed.) 155s Preparing to unpack .../cron_3.0pl1-200ubuntu1_amd64.deb ... 155s Unpacking cron (3.0pl1-200ubuntu1) over (3.0pl1-196ubuntu2) ... 155s Preparing to unpack .../libcap2_1%3a2.75-10ubuntu1_amd64.deb ... 155s Unpacking libcap2:amd64 (1:2.75-10ubuntu1) over (1:2.75-7ubuntu2) ... 155s Setting up libcap2:amd64 (1:2.75-10ubuntu1) ... 155s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82963 files and directories currently installed.) 155s Preparing to unpack .../0-libpam-cap_1%3a2.75-10ubuntu1_amd64.deb ... 155s Unpacking libpam-cap:amd64 (1:2.75-10ubuntu1) over (1:2.75-7ubuntu2) ... 155s Preparing to unpack .../1-libcap2-bin_1%3a2.75-10ubuntu1_amd64.deb ... 155s Unpacking libcap2-bin (1:2.75-10ubuntu1) over (1:2.75-7ubuntu2) ... 155s Preparing to unpack .../2-libxml2-16_2.15.1+dfsg-0.3_amd64.deb ... 155s Unpacking libxml2-16:amd64 (2.15.1+dfsg-0.3) over (2.14.5+dfsg-0.2build1) ... 155s Preparing to unpack .../3-cron-daemon-common_3.0pl1-200ubuntu1_all.deb ... 155s Unpacking cron-daemon-common (3.0pl1-200ubuntu1) over (3.0pl1-196ubuntu2) ... 156s Preparing to unpack .../4-liburcu8t64_0.15.5-1_amd64.deb ... 156s Unpacking liburcu8t64:amd64 (0.15.5-1) over (0.15.4-1) ... 156s Preparing to unpack .../5-3cpio_0.12.0-1ubuntu1_amd64.deb ... 156s Unpacking 3cpio (0.12.0-1ubuntu1) over (0.11.0-2ubuntu2) ... 156s Preparing to unpack .../6-fwupd_2.0.17-6_amd64.deb ... 156s Unpacking fwupd (2.0.17-6) over (2.0.17-2) ... 156s Preparing to unpack .../7-libfwupd3_2.0.17-6_amd64.deb ... 156s Unpacking libfwupd3:amd64 (2.0.17-6) over (2.0.17-2) ... 156s Preparing to unpack .../8-lto-disabled-list_72_all.deb ... 156s Unpacking lto-disabled-list (72) over (71) ... 156s Setting up liburcu8t64:amd64 (0.15.5-1) ... 156s Setting up 3cpio (0.12.0-1ubuntu1) ... 156s Setting up lto-disabled-list (72) ... 156s Setting up libxml2-16:amd64 (2.15.1+dfsg-0.3) ... 156s Setting up libfwupd3:amd64 (2.0.17-6) ... 156s Setting up libcap2-bin (1:2.75-10ubuntu1) ... 156s Setting up libpam-cap:amd64 (1:2.75-10ubuntu1) ... 156s Setting up fwupd (2.0.17-6) ... 157s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 157s fwupd.service is a disabled or a static unit not running, not starting it. 157s Setting up cron-daemon-common (3.0pl1-200ubuntu1) ... 157s Setting up cron (3.0pl1-200ubuntu1) ... 157s Processing triggers for dbus (1.16.2-2ubuntu2) ... 157s Processing triggers for libc-bin (2.42-2ubuntu2) ... 157s Processing triggers for man-db (2.13.1-1) ... 158s autopkgtest [04:17:09]: upgrading testbed (apt dist-upgrade and autopurge) 158s Reading package lists... 158s Building dependency tree... 158s Reading state information... 158s Calculating upgrade... 159s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 159s Reading package lists... 159s Building dependency tree... 159s Reading state information... 159s Solving dependencies... 159s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 159s autopkgtest [04:17:10]: rebooting testbed after setup commands that affected boot 189s Reading package lists... 190s Building dependency tree... 190s Reading state information... 190s Solving dependencies... 190s The following NEW packages will be installed: 190s libaec0 libblas3 libgfortran5 libhdf5-310 libhdf5-hl-310 liblapack3 liblzf1 190s libsz2 python3-all python3-decorator python3-h5py python3-h5py-serial 190s python3-h5sparse python3-numpy python3-numpy-dev python3-scipy 190s 0 upgraded, 16 newly installed, 0 to remove and 0 not upgraded. 190s Need to get 35.2 MB of archives. 190s After this operation, 181 MB of additional disk space will be used. 190s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-numpy-dev amd64 1:2.3.4+ds-3ubuntu1 [147 kB] 190s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7 [259 kB] 190s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 15.2.0-7ubuntu1 [939 kB] 191s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7 [2739 kB] 193s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-numpy amd64 1:2.3.4+ds-3ubuntu1 [8126 kB] 195s Get:6 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec0 amd64 1.1.4-2 [22.9 kB] 195s Get:7 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsz2 amd64 1.1.4-2 [5516 B] 195s Get:8 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-310 amd64 1.14.5+repack-4 [1432 kB] 195s Get:9 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-310 amd64 1.14.5+repack-4 [59.8 kB] 195s Get:10 http://ftpmaster.internal/ubuntu resolute/universe amd64 liblzf1 amd64 3.6-4 [7624 B] 195s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-all amd64 3.13.7-1 [884 B] 195s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-decorator all 5.2.1-2 [28.1 kB] 195s Get:13 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5py-serial amd64 3.13.0-1ubuntu1 [1184 kB] 195s Get:14 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5py all 3.13.0-1ubuntu1 [8230 B] 195s Get:15 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-scipy amd64 1.15.3-1ubuntu1 [20.3 MB] 196s Get:16 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5sparse all 0.1.0-8 [6866 B] 196s Fetched 35.2 MB in 6s (5607 kB/s) 196s Selecting previously unselected package python3-numpy-dev:amd64. 196s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 82962 files and directories currently installed.) 196s Preparing to unpack .../00-python3-numpy-dev_1%3a2.3.4+ds-3ubuntu1_amd64.deb ... 196s Unpacking python3-numpy-dev:amd64 (1:2.3.4+ds-3ubuntu1) ... 196s Selecting previously unselected package libblas3:amd64. 196s Preparing to unpack .../01-libblas3_3.12.1-7_amd64.deb ... 196s Unpacking libblas3:amd64 (3.12.1-7) ... 196s Selecting previously unselected package libgfortran5:amd64. 196s Preparing to unpack .../02-libgfortran5_15.2.0-7ubuntu1_amd64.deb ... 196s Unpacking libgfortran5:amd64 (15.2.0-7ubuntu1) ... 197s Selecting previously unselected package liblapack3:amd64. 197s Preparing to unpack .../03-liblapack3_3.12.1-7_amd64.deb ... 197s Unpacking liblapack3:amd64 (3.12.1-7) ... 197s Selecting previously unselected package python3-numpy. 197s Preparing to unpack .../04-python3-numpy_1%3a2.3.4+ds-3ubuntu1_amd64.deb ... 197s Unpacking python3-numpy (1:2.3.4+ds-3ubuntu1) ... 197s Selecting previously unselected package libaec0:amd64. 197s Preparing to unpack .../05-libaec0_1.1.4-2_amd64.deb ... 197s Unpacking libaec0:amd64 (1.1.4-2) ... 197s Selecting previously unselected package libsz2:amd64. 197s Preparing to unpack .../06-libsz2_1.1.4-2_amd64.deb ... 197s Unpacking libsz2:amd64 (1.1.4-2) ... 197s Selecting previously unselected package libhdf5-310:amd64. 197s Preparing to unpack .../07-libhdf5-310_1.14.5+repack-4_amd64.deb ... 197s Unpacking libhdf5-310:amd64 (1.14.5+repack-4) ... 197s Selecting previously unselected package libhdf5-hl-310:amd64. 197s Preparing to unpack .../08-libhdf5-hl-310_1.14.5+repack-4_amd64.deb ... 197s Unpacking libhdf5-hl-310:amd64 (1.14.5+repack-4) ... 197s Selecting previously unselected package liblzf1:amd64. 197s Preparing to unpack .../09-liblzf1_3.6-4_amd64.deb ... 197s Unpacking liblzf1:amd64 (3.6-4) ... 197s Selecting previously unselected package python3-all. 197s Preparing to unpack .../10-python3-all_3.13.7-1_amd64.deb ... 197s Unpacking python3-all (3.13.7-1) ... 197s Selecting previously unselected package python3-decorator. 197s Preparing to unpack .../11-python3-decorator_5.2.1-2_all.deb ... 197s Unpacking python3-decorator (5.2.1-2) ... 197s Selecting previously unselected package python3-h5py-serial. 197s Preparing to unpack .../12-python3-h5py-serial_3.13.0-1ubuntu1_amd64.deb ... 197s Unpacking python3-h5py-serial (3.13.0-1ubuntu1) ... 197s Selecting previously unselected package python3-h5py. 197s Preparing to unpack .../13-python3-h5py_3.13.0-1ubuntu1_all.deb ... 197s Unpacking python3-h5py (3.13.0-1ubuntu1) ... 197s Selecting previously unselected package python3-scipy. 197s Preparing to unpack .../14-python3-scipy_1.15.3-1ubuntu1_amd64.deb ... 197s Unpacking python3-scipy (1.15.3-1ubuntu1) ... 197s Selecting previously unselected package python3-h5sparse. 197s Preparing to unpack .../15-python3-h5sparse_0.1.0-8_all.deb ... 197s Unpacking python3-h5sparse (0.1.0-8) ... 197s Setting up python3-all (3.13.7-1) ... 197s Setting up libaec0:amd64 (1.1.4-2) ... 197s Setting up python3-decorator (5.2.1-2) ... 197s Setting up libblas3:amd64 (3.12.1-7) ... 197s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 197s Setting up liblzf1:amd64 (3.6-4) ... 197s Setting up python3-numpy-dev:amd64 (1:2.3.4+ds-3ubuntu1) ... 197s Setting up libgfortran5:amd64 (15.2.0-7ubuntu1) ... 197s Setting up libsz2:amd64 (1.1.4-2) ... 197s Setting up liblapack3:amd64 (3.12.1-7) ... 197s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 197s Setting up python3-numpy (1:2.3.4+ds-3ubuntu1) ... 198s Setting up libhdf5-310:amd64 (1.14.5+repack-4) ... 198s Setting up libhdf5-hl-310:amd64 (1.14.5+repack-4) ... 198s Setting up python3-scipy (1.15.3-1ubuntu1) ... 201s Setting up python3-h5py-serial (3.13.0-1ubuntu1) ... 201s Setting up python3-h5py (3.13.0-1ubuntu1) ... 201s Setting up python3-h5sparse (0.1.0-8) ... 201s Processing triggers for libc-bin (2.42-2ubuntu2) ... 201s Processing triggers for man-db (2.13.1-1) ... 203s autopkgtest [04:17:54]: test autodep8-python3: set -e ; for py in $(py3versions -r 2>/dev/null) ; do cd "$AUTOPKGTEST_TMP" ; echo "Testing with $py:" ; $py -c "import h5sparse; print(h5sparse)" ; done 203s autopkgtest [04:17:54]: test autodep8-python3: [----------------------- 203s Testing with python3.13: 204s 204s autopkgtest [04:17:55]: test autodep8-python3: -----------------------] 204s autodep8-python3 PASS (superficial) 204s autopkgtest [04:17:55]: test autodep8-python3: - - - - - - - - - - results - - - - - - - - - - 205s autopkgtest [04:17:56]: @@@@@@@@@@@@@@@@@@@@ summary 205s run-unit-test PASS 205s autodep8-python3 PASS (superficial)