0s autopkgtest [05:32:44]: starting date and time: 2026-02-02 05:32:44+0000 0s autopkgtest [05:32:44]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [05:32:44]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.m8z358ck/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:fenics-dolfinx,src:adios2,src:nanobind,src:sphinx-rtd-theme --apt-upgrade fenicsx-performance-tests --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=fenics-dolfinx/1:0.10.0.post5-5build1 adios2/2.11.0+dfsg1-4 nanobind/2.10.2-2 sphinx-rtd-theme/3.1.0+dfsg-1' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-amd64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@sto01-10.secgroup --name adt-resolute-amd64-fenicsx-performance-tests-20260202-053244-juju-7f2275-prod-proposed-migration-environment-20-7c6e4cf9-7479-407a-8de5-0931555d8ab9 --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-autopkgtest-workers-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 4s Creating nova instance adt-resolute-amd64-fenicsx-performance-tests-20260202-053244-juju-7f2275-prod-proposed-migration-environment-20-7c6e4cf9-7479-407a-8de5-0931555d8ab9 from image adt/ubuntu-resolute-amd64-server-20260202.img (UUID 54e94ad2-f1e5-466e-b281-ee6f460760b3)... 78s autopkgtest [05:34:02]: testbed dpkg architecture: amd64 78s autopkgtest [05:34:02]: testbed apt version: 3.1.14 78s autopkgtest [05:34:02]: @@@@@@@@@@@@@@@@@@@@ test bed setup 78s autopkgtest [05:34:02]: testbed release detected to be: None 79s autopkgtest [05:34:03]: updating testbed package index (apt update) 79s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 79s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 79s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 79s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 79s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [2816 B] 80s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [99.9 kB] 80s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1273 kB] 80s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [28.0 kB] 80s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [115 kB] 80s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [97.2 kB] 80s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [3536 B] 80s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 Packages [12.3 kB] 80s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/restricted i386 Packages [3692 B] 80s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [336 B] 80s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [1084 kB] 80s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [409 kB] 80s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [27.7 kB] 80s Get:18 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [3960 B] 80s Get:19 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [24.7 kB] 81s Get:20 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [1060 B] 81s Fetched 3311 kB in 1s (2465 kB/s) 82s Reading package lists... 82s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 82s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 82s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 82s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 83s Reading package lists... 83s Reading package lists... 83s Building dependency tree... 83s Reading state information... 83s Calculating upgrade... 83s The following packages will be upgraded: 83s libgpg-error-l10n libgpg-error0 pci.ids 83s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 83s Need to get 391 kB of archives. 83s After this operation, 12.3 kB of additional disk space will be used. 83s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 libgpg-error-l10n all 1.58-2 [9244 B] 83s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 libgpg-error0 amd64 1.58-2 [83.3 kB] 83s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 pci.ids all 0.0~2026.01.31-1 [299 kB] 83s dpkg-preconfigure: unable to re-open stdin: No such file or directory 83s Fetched 391 kB in 0s (0 B/s) 84s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83956 files and directories currently installed.) 84s Preparing to unpack .../libgpg-error-l10n_1.58-2_all.deb ... 84s Unpacking libgpg-error-l10n (1.58-2) over (1.58-1build1) ... 84s Preparing to unpack .../libgpg-error0_1.58-2_amd64.deb ... 84s Unpacking libgpg-error0:amd64 (1.58-2) over (1.58-1build1) ... 84s Preparing to unpack .../pci.ids_0.0~2026.01.31-1_all.deb ... 84s Unpacking pci.ids (0.0~2026.01.31-1) over (0.0~2025.12.16-1) ... 84s Setting up pci.ids (0.0~2026.01.31-1) ... 84s Setting up libgpg-error0:amd64 (1.58-2) ... 84s Setting up libgpg-error-l10n (1.58-2) ... 84s Processing triggers for libc-bin (2.42-2ubuntu4) ... 84s autopkgtest [05:34:08]: upgrading testbed (apt dist-upgrade and autopurge) 84s Reading package lists... 84s Building dependency tree... 84s Reading state information... 84s Calculating upgrade... 84s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 84s Reading package lists... 85s Building dependency tree... 85s Reading state information... 85s Solving dependencies... 85s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 87s autopkgtest [05:34:11]: testbed running kernel: Linux 6.18.0-9-generic #9-Ubuntu SMP PREEMPT_DYNAMIC Mon Jan 12 16:49:02 UTC 2026 87s autopkgtest [05:34:11]: @@@@@@@@@@@@@@@@@@@@ apt-source fenicsx-performance-tests 89s Get:1 http://ftpmaster.internal/ubuntu resolute/universe fenicsx-performance-tests 0.10.0-2 (dsc) [2476 B] 89s Get:2 http://ftpmaster.internal/ubuntu resolute/universe fenicsx-performance-tests 0.10.0-2 (tar) [21.2 kB] 89s Get:3 http://ftpmaster.internal/ubuntu resolute/universe fenicsx-performance-tests 0.10.0-2 (diff) [6428 B] 89s gpgv: Signature made Mon Dec 22 11:32:48 2025 UTC 89s gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA 89s gpgv: Can't check signature: No public key 89s dpkg-source: warning: cannot verify inline signature for ./fenicsx-performance-tests_0.10.0-2.dsc: no acceptable signature found 89s autopkgtest [05:34:13]: testing package fenicsx-performance-tests version 0.10.0-2 89s autopkgtest [05:34:13]: build not needed 90s autopkgtest [05:34:14]: test dolfinx-performance-test-binary: preparing testbed 90s Reading package lists... 90s Building dependency tree... 90s Reading state information... 90s Solving dependencies... 90s Some packages could not be installed. This may mean that you have 90s requested an impossible situation or if you are using the unstable 90s distribution that some required packages have not yet been created 90s or been moved out of Incoming. 90s The following information may help to resolve the situation: 90s 90s The following packages have unmet dependencies: 90s satisfy:command-line : Depends: fenicsx-performance-tests but it is not going to be installed 90s Depends: fenicsx-performance-tests-source but it is not going to be installed 90s Depends: debhelper-compat (= 13) 90s Depends: cmake (>= 3.16~) 90s Depends: libboost-dev (>= 1.70~) but it is not going to be installed 90s Depends: libdolfinx-dev (>= 1:0.10~) but it is not going to be installed 90s Depends: libdolfinx-real-dev but it is not going to be installed 90s Depends: mpi-default-dev but it is not going to be installed 90s Depends: python3-ffcx but it is not going to be installed 90s Depends: build-essential but it is not going to be installed 90s E: Unable to satisfy dependencies. Reached two conflicting assignments: 90s 1. libibverbs1:amd64 is selected for install because: 90s 1. satisfy:command-line:amd64=1 is selected for install 90s 2. satisfy:command-line:amd64 Depends fenicsx-performance-tests 90s 3. fenicsx-performance-tests:amd64 Depends libopenmpi40 (>= 5.0.8) 90s 4. libopenmpi40:amd64 Depends libfabric1 (>= 2.0.0) 90s 5. libfabric1:amd64 Depends libibverbs1 (>= 36) 90s 2. libibverbs1:amd64 is available in versions 61.0-2ubuntu1, 61.0-2ubuntu2 90s but none of the choices are installable: 90s - libibverbs1:amd64=61.0-2ubuntu1 is not selected for install 90s - libibverbs1:amd64=61.0-2ubuntu2 is not selected for install 90s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from resolute-proposed 90s Reading package lists... 91s Building dependency tree... 91s Reading state information... 91s Solving dependencies... 91s The following NEW packages will be installed: 91s autoconf automake autopoint autotools-dev build-essential cmake cmake-data 91s comerr-dev cpp cpp-15 cpp-15-x86-64-linux-gnu cpp-x86-64-linux-gnu debhelper 91s debugedit dh-autoreconf dh-strip-nondeterminism dwz 91s fenicsx-performance-tests fenicsx-performance-tests-source fonts-mathjax g++ 91s g++-15 g++-15-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-15 91s gcc-15-x86-64-linux-gnu gcc-x86-64-linux-gnu gettext gfortran gfortran-15 91s gfortran-15-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools 91s intltool-debian krb5-multidev libadios2-common-c++-dev 91s libadios2-common-core-dev libadios2-mpi-auxiliary-2.11 91s libadios2-mpi-auxiliary-dev libadios2-mpi-c++-2.11 libadios2-mpi-c++-dev 91s libadios2-mpi-c-2.11 libadios2-mpi-core-2.11 libadios2-mpi-core-dev 91s libadios2-mpi-plugins libaec-dev libaec0 libamd-comgr3 libamd3 libamdhip64-6 91s libarchive-zip-perl libarpack2-dev libarpack2t64 libasan8 libbasix-dev 91s libbasix0.10 libblas-dev libblas3 libblosc2-6 libboost-atomic1.88-dev 91s libboost-atomic1.88.0 libboost-chrono-dev libboost-chrono1.88-dev 91s libboost-chrono1.88.0 libboost-container1.88-dev libboost-container1.88.0 91s libboost-date-time1.88-dev libboost-date-time1.88.0 libboost-dev 91s libboost-filesystem-dev libboost-filesystem1.88-dev 91s libboost-filesystem1.88.0 libboost-graph1.88-dev libboost-graph1.88.0 91s libboost-iostreams-dev libboost-iostreams1.88-dev libboost-iostreams1.88.0 91s libboost-math-dev libboost-math1.88-dev libboost-math1.88.0 libboost-mpi-dev 91s libboost-mpi1.88-dev libboost-mpi1.88.0 libboost-program-options-dev 91s libboost-program-options1.88-dev libboost-program-options1.88.0 91s libboost-random1.88-dev libboost-random1.88.0 libboost-regex1.88-dev 91s libboost-regex1.88.0 libboost-serialization-dev 91s libboost-serialization1.88-dev libboost-serialization1.88.0 91s libboost-system1.88-dev libboost-system1.88.0 libboost-test1.88-dev 91s libboost-test1.88.0 libboost-thread-dev libboost-thread1.88-dev 91s libboost-thread1.88.0 libboost-timer-dev libboost-timer1.88-dev 91s libboost-timer1.88.0 libboost1.88-dev libbrotli-dev libbtf2 libc-dev-bin 91s libc6-dbg libc6-dev libcamd3 libcc1-0 libccolamd3 libcholmod5 libcolamd3 91s libcombblas2.0.0t64 libcrypt-dev libcurl4-openssl-dev libcxsparse4 91s libdebhelper-perl libdolfinx-dev libdolfinx-real-dev libdolfinx-real0.10 91s libeigen3-dev libevent-2.1-7t64 libevent-dev libevent-extra-2.1-7t64 91s libevent-openssl-2.1-7t64 libevent-pthreads-2.1-7t64 libexpat1-dev 91s libfabric1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 91s libfftw3-mpi-dev libfftw3-mpi3 libfftw3-quad3 libfftw3-single3 91s libfile-stripnondeterminism-perl libfmt-dev libfmt10 libgcc-15-dev 91s libgfortran-15-dev libgfortran5 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64 91s libgnutls-openssl27t64 libgnutls28-dev libgomp1 libgssrpc4t64 91s libhdf5-mpi-dev libhdf5-openmpi-310 libhdf5-openmpi-cpp-310 91s libhdf5-openmpi-dev libhdf5-openmpi-fortran-310 libhdf5-openmpi-hl-310 91s libhdf5-openmpi-hl-cpp-310 libhdf5-openmpi-hl-fortran-310 libhsa-runtime64-1 91s libhsakmt1 libhwasan0 libhwloc-dev libhwloc-plugins libhwloc15 91s libhypre-3.0.0 libhypre-dev libibmad5 libibumad3 libibverbs-dev libicu-dev 91s libidn2-dev libisl23 libitm1 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 91s libjpeg8 libjpeg8-dev libjs-jquery libjs-jquery-ui libjs-mathjax 91s libjsoncpp26 libkadm5clnt-mit12 libkadm5srv-mit12 libkdb5-10t64 libklu2 91s libkrb5-dev liblapack-dev liblapack3 libldap-dev libldl3 liblsan0 91s libltdl-dev libltdl7 liblzma-dev libmetis5 libmpc3 libmumps-5.8 libmumps-dev 91s libmumps-headers-dev libnghttp2-dev libnl-3-dev libnl-route-3-dev 91s libnorm1t64 libnuma-dev libopenmpi-dev libopenmpi40 libp11-kit-dev 91s libparpack2-dev libparpack2t64 libparu1 libpciaccess0 libpetsc-real3.24 91s libpetsc-real3.24-dev libpetsc3.24-dev-common libpgm-5.3-0t64 libpkgconf7 91s libpsl-dev libpsm2-2 libptscotch-7.0c libptscotch-dev libptscotcherr-7.0 91s libptscotcherr-dev libpugixml-dev libpugixml1v5 libpython3-dev libpython3.14 91s libpython3.14-dev libpython3.14-minimal libpython3.14-stdlib libquadmath0 91s librbio4 librdmacm1t64 librhash1 librtmp-dev libscalapack-mpi-dev 91s libscalapack-openmpi-dev libscalapack-openmpi2.2 libscotch-7.0c 91s libscotch-dev libscotcherr-7.0 libscotcherr-dev libslepc-real3.24 91s libslepc-real3.24-dev libsodium23 libspdlog-dev libspdlog1.15 libspex3 91s libspqr4 libssh2-1-dev libssl-dev libstdc++-15-dev libsuitesparse-dev 91s libsuitesparse-mongoose3 libsuitesparseconfig7 libsuperlu-dev 91s libsuperlu-dist-dev libsuperlu-dist9 libsuperlu7 libsz2 libtasn1-6-dev 91s libtool libtsan2 libubsan1 libucx0 libumfpack6 libunbound8 libx11-dev 91s libxau-dev libxcb1-dev libxdmcp-dev libxml2-dev libxnvctrl0 libyaml-cpp0.8 91s libyaml-dev libze1 libzfp1t64 libzmq5 libzstd-dev linux-libc-dev m4 91s mpi-default-bin mpi-default-dev nanobind-dev nettle-dev ocl-icd-libopencl1 91s ocl-icd-opencl-dev opencl-c-headers opencl-clhpp-headers openmpi-bin 91s openmpi-common pkgconf pkgconf-bin po-debconf python3-basix python3-cffi 91s python3-dev python3-ffcx python3-nanobind python3-numpy python3-numpy-dev 91s python3-ply python3-pycparser python3-ufl python3.14 python3.14-dev 91s python3.14-minimal robin-map-dev rpcsvc-proto valgrind valgrind-mpi 91s x11proto-dev xorg-sgml-doctools xtrans-dev zlib1g-dev 91s The following packages will be upgraded: 91s ibverbs-providers libbrotli1 libexpat1 libibverbs1 libnl-3-200 91s libnl-route-3-200 libpython3-stdlib libssl3t64 libzstd1 python3 91s python3-minimal zlib1g 91s 12 upgraded, 317 newly installed, 0 to remove and 60 not upgraded. 91s Need to get 331 MB of archives. 91s After this operation, 1384 MB of additional disk space will be used. 91s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libexpat1 amd64 2.7.4-1 [94.0 kB] 91s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libzstd1 amd64 1.5.7+dfsg-3 [308 kB] 91s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 zlib1g amd64 1:1.3.dfsg+really1.3.1-1ubuntu3 [63.9 kB] 91s Get:4 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libssl3t64 amd64 3.5.4-1ubuntu1 [2355 kB] 91s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-minimal amd64 3.14.2-1 [920 kB] 91s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.14-minimal amd64 3.14.2-1 [2563 kB] 91s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-minimal amd64 3.14.2-1 [28.2 kB] 91s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3 amd64 3.14.2-1 [22.9 kB] 91s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-stdlib amd64 3.14.2-1 [2398 kB] 91s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.14 amd64 3.14.2-1 [816 kB] 91s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libpython3-stdlib amd64 3.14.2-1 [10.9 kB] 91s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-numpy-dev amd64 1:2.3.5+ds-3 [147 kB] 91s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7ubuntu1 [260 kB] 92s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 15.2.0-12ubuntu1 [939 kB] 92s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7ubuntu1 [2739 kB] 92s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-numpy amd64 1:2.3.5+ds-3 [8129 kB] 92s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libnl-route-3-200 amd64 3.12.0-2 [204 kB] 92s Get:18 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libnl-3-200 amd64 3.12.0-2 [58.8 kB] 92s Get:19 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libibverbs1 amd64 61.0-2ubuntu2 [70.5 kB] 92s Get:20 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 ibverbs-providers amd64 61.0-2ubuntu2 [417 kB] 92s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 m4 amd64 1.4.20-2 [217 kB] 92s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 autoconf all 2.72-3.1ubuntu1 [384 kB] 92s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 autotools-dev all 20240727.1 [43.4 kB] 92s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 automake all 1:1.18.1-3build1 [582 kB] 92s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 autopoint all 0.23.2-1 [620 kB] 92s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libc-dev-bin amd64 2.42-2ubuntu4 [23.3 kB] 92s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-libc-dev amd64 6.18.0-9.9 [1860 kB] 92s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 libcrypt-dev amd64 1:4.5.1-1 [122 kB] 92s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 rpcsvc-proto amd64 1.4.3-1 [68.7 kB] 92s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 libc6-dev amd64 2.42-2ubuntu4 [2207 kB] 92s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libisl23 amd64 0.27-1build1 [691 kB] 92s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libmpc3 amd64 1.3.1-2 [54.8 kB] 92s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [12.9 MB] 92s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15 amd64 15.2.0-12ubuntu1 [1034 B] 92s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [5746 B] 92s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp amd64 4:15.2.0-4ubuntu1 [22.4 kB] 92s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libcc1-0 amd64 15.2.0-12ubuntu1 [47.4 kB] 92s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 15.2.0-12ubuntu1 [151 kB] 92s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libitm1 amd64 15.2.0-12ubuntu1 [29.5 kB] 92s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 libasan8 amd64 15.2.0-12ubuntu1 [3070 kB] 92s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsan0 amd64 15.2.0-12ubuntu1 [1360 kB] 92s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 libtsan2 amd64 15.2.0-12ubuntu1 [2757 kB] 92s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 libubsan1 amd64 15.2.0-12ubuntu1 [1210 kB] 92s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 libhwasan0 amd64 15.2.0-12ubuntu1 [1685 kB] 92s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 libquadmath0 amd64 15.2.0-12ubuntu1 [153 kB] 92s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-15-dev amd64 15.2.0-12ubuntu1 [2866 kB] 92s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [25.4 MB] 93s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15 amd64 15.2.0-12ubuntu1 [530 kB] 93s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1208 B] 93s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc amd64 4:15.2.0-4ubuntu1 [5024 B] 93s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++-15-dev amd64 15.2.0-12ubuntu1 [2553 kB] 93s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [14.4 MB] 93s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15 amd64 15.2.0-12ubuntu1 [25.3 kB] 93s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [966 B] 93s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 g++ amd64 4:15.2.0-4ubuntu1 [1100 B] 93s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 build-essential amd64 12.12ubuntu2 [5256 B] 93s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 cmake-data all 4.1.1+really3.31.6-2ubuntu1 [2329 kB] 93s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libjsoncpp26 amd64 1.9.6-5 [84.0 kB] 93s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 librhash1 amd64 1.4.6-1.1 [133 kB] 93s Get:60 http://ftpmaster.internal/ubuntu resolute/main amd64 cmake amd64 4.1.1+really3.31.6-2ubuntu1 [12.9 MB] 93s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 libdebhelper-perl all 13.28ubuntu1 [97.4 kB] 93s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 libtool all 2.5.4-9 [169 kB] 93s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 dh-autoreconf all 21 [12.5 kB] 93s Get:64 http://ftpmaster.internal/ubuntu resolute/main amd64 libarchive-zip-perl all 1.68-1 [90.2 kB] 93s Get:65 http://ftpmaster.internal/ubuntu resolute/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1build1 [20.6 kB] 93s Get:66 http://ftpmaster.internal/ubuntu resolute/main amd64 dh-strip-nondeterminism all 1.15.0-1build1 [5110 B] 93s Get:67 http://ftpmaster.internal/ubuntu resolute/main amd64 debugedit amd64 1:5.2-3 [49.9 kB] 93s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 dwz amd64 0.16-2 [115 kB] 93s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 gettext amd64 0.23.2-1 [1019 kB] 93s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 intltool-debian all 0.35.0+20060710.6build1 [24.1 kB] 93s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 po-debconf all 1.0.22 [215 kB] 93s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 debhelper all 13.28ubuntu1 [916 kB] 93s Get:73 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 libbasix0.10 amd64 0.10.0.post0-2build1 [424 kB] 93s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-program-options1.88.0 amd64 1.88.0-1.4ubuntu3 [325 kB] 93s Get:75 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 libadios2-mpi-c-2.11 amd64 2.11.0+dfsg1-4 [60.1 kB] 93s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10build1 [8360 B] 93s Get:77 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpsm2-2 amd64 11.2.185-2.1 [193 kB] 93s Get:78 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 librdmacm1t64 amd64 61.0-2ubuntu2 [73.6 kB] 93s Get:79 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfabric1 amd64 2.1.0-1.1 [697 kB] 93s Get:80 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhwloc15 amd64 2.12.2-1 [181 kB] 93s Get:81 http://ftpmaster.internal/ubuntu resolute/universe amd64 libamd-comgr3 amd64 7.1.0+dfsg-0ubuntu2 [15.2 MB] 94s Get:82 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 libhsakmt1 amd64 7.1.0+dfsg-0ubuntu5 [75.4 kB] 94s Get:83 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 libhsa-runtime64-1 amd64 7.1.0+dfsg-0ubuntu5 [600 kB] 94s Get:84 http://ftpmaster.internal/ubuntu resolute/universe amd64 libamdhip64-6 amd64 6.4.3-4 [10.3 MB] 94s Get:85 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libibumad3 amd64 61.0-2ubuntu2 [31.6 kB] 94s Get:86 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libibmad5 amd64 61.0-2ubuntu2 [44.2 kB] 94s Get:87 http://ftpmaster.internal/ubuntu resolute/universe amd64 libucx0 amd64 1.20.0+ds-4ubuntu1 [951 kB] 94s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 libpciaccess0 amd64 0.18.1-1ubuntu2 [19.0 kB] 94s Get:89 http://ftpmaster.internal/ubuntu resolute/main amd64 libxnvctrl0 amd64 510.47.03-0ubuntu7 [13.2 kB] 94s Get:90 http://ftpmaster.internal/ubuntu resolute/universe amd64 libze1 amd64 1.27.0-1 [630 kB] 94s Get:91 http://ftpmaster.internal/ubuntu resolute/main amd64 ocl-icd-libopencl1 amd64 2.3.4-1 [40.9 kB] 94s Get:92 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhwloc-plugins amd64 2.12.2-1 [22.2 kB] 94s Get:93 http://ftpmaster.internal/ubuntu resolute/universe amd64 libopenmpi40 amd64 5.0.8-8ubuntu1 [3384 kB] 94s Get:94 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsz2 amd64 1.1.5-1 [17.9 kB] 94s Get:95 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-openmpi-310 amd64 1.14.6+repack-2 [1492 kB] 94s Get:96 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 libadios2-mpi-auxiliary-2.11 amd64 2.11.0+dfsg1-4 [445 kB] 94s Get:97 http://ftpmaster.internal/ubuntu resolute/universe amd64 libblosc2-6 amd64 2.22.0+ds-1 [176 kB] 94s Get:98 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpugixml1v5 amd64 1.14-2build1 [96.4 kB] 94s Get:99 http://ftpmaster.internal/ubuntu resolute/main amd64 libyaml-cpp0.8 amd64 0.8.0+dfsg-9 [118 kB] 94s Get:100 http://ftpmaster.internal/ubuntu resolute/universe amd64 libzfp1t64 amd64 1.0.1-4build4 [64.5 kB] 94s Get:101 http://ftpmaster.internal/ubuntu resolute/universe amd64 libnorm1t64 amd64 1.5.9+dfsg-4 [158 kB] 94s Get:102 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpgm-5.3-0t64 amd64 5.3.128~dfsg-2.1build2 [168 kB] 94s Get:103 http://ftpmaster.internal/ubuntu resolute/main amd64 libsodium23 amd64 1.0.18-2 [165 kB] 94s Get:104 http://ftpmaster.internal/ubuntu resolute/universe amd64 libzmq5 amd64 4.3.5-1build3 [262 kB] 94s Get:105 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 libadios2-mpi-plugins amd64 2.11.0+dfsg1-4 [9366 B] 94s Get:106 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 libadios2-mpi-core-2.11 amd64 2.11.0+dfsg1-4 [1848 kB] 94s Get:107 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 libadios2-mpi-c++-2.11 amd64 2.11.0+dfsg1-4 [208 kB] 94s Get:108 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfmt10 amd64 10.1.1+ds1-4build1 [75.6 kB] 94s Get:109 http://ftpmaster.internal/ubuntu resolute/main amd64 libsuitesparseconfig7 amd64 1:7.12.1+dfsg-1 [22.0 kB] 94s Get:110 http://ftpmaster.internal/ubuntu resolute/universe amd64 libamd3 amd64 1:7.12.1+dfsg-1 [35.8 kB] 94s Get:111 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcamd3 amd64 1:7.12.1+dfsg-1 [32.3 kB] 94s Get:112 http://ftpmaster.internal/ubuntu resolute/universe amd64 libccolamd3 amd64 1:7.12.1+dfsg-1 [34.5 kB] 94s Get:113 http://ftpmaster.internal/ubuntu resolute/main amd64 libcolamd3 amd64 1:7.12.1+dfsg-1 [27.4 kB] 94s Get:114 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcholmod5 amd64 1:7.12.1+dfsg-1 [717 kB] 94s Get:115 http://ftpmaster.internal/ubuntu resolute/main amd64 libfftw3-double3 amd64 3.3.10-2fakesync1build2 [860 kB] 94s Get:116 http://ftpmaster.internal/ubuntu resolute/main amd64 libfftw3-long3 amd64 3.3.10-2fakesync1build2 [398 kB] 94s Get:117 http://ftpmaster.internal/ubuntu resolute/main amd64 libfftw3-single3 amd64 3.3.10-2fakesync1build2 [894 kB] 94s Get:118 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfftw3-mpi3 amd64 3.3.10-2fakesync1build2 [58.6 kB] 94s Get:119 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcombblas2.0.0t64 amd64 2.0.0-7 [249 kB] 94s Get:120 http://ftpmaster.internal/ubuntu resolute/universe amd64 libmetis5 amd64 5.1.0.dfsg-8 [182 kB] 94s Get:121 http://ftpmaster.internal/ubuntu resolute/universe amd64 libptscotcherr-7.0 amd64 7.0.10-7ubuntu4 [13.5 kB] 94s Get:122 http://ftpmaster.internal/ubuntu resolute/universe amd64 libscotcherr-7.0 amd64 7.0.10-7ubuntu4 [13.5 kB] 94s Get:123 http://ftpmaster.internal/ubuntu resolute/universe amd64 libscotch-7.0c amd64 7.0.10-7ubuntu4 [259 kB] 94s Get:124 http://ftpmaster.internal/ubuntu resolute/universe amd64 libptscotch-7.0c amd64 7.0.10-7ubuntu4 [161 kB] 94s Get:125 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsuperlu-dist9 amd64 9.2.1+dfsg1-1 [767 kB] 94s Get:126 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhypre-3.0.0 amd64 3.0.0-5 [2086 kB] 94s Get:127 http://ftpmaster.internal/ubuntu resolute/universe amd64 libbtf2 amd64 1:7.12.1+dfsg-1 [22.8 kB] 94s Get:128 http://ftpmaster.internal/ubuntu resolute/universe amd64 libklu2 amd64 1:7.12.1+dfsg-1 [89.4 kB] 94s Get:129 http://ftpmaster.internal/ubuntu resolute/universe amd64 openmpi-common all 5.0.8-8ubuntu1 [108 kB] 94s Get:130 http://ftpmaster.internal/ubuntu resolute/universe amd64 openmpi-bin amd64 5.0.8-8ubuntu1 [201 kB] 94s Get:131 http://ftpmaster.internal/ubuntu resolute/universe amd64 mpi-default-bin amd64 1.20 [2658 B] 94s Get:132 http://ftpmaster.internal/ubuntu resolute/universe amd64 libscalapack-openmpi2.2 amd64 2.2.2-5 [1839 kB] 95s Get:133 http://ftpmaster.internal/ubuntu resolute/universe amd64 libmumps-5.8 amd64 5.8.1-2ubuntu1 [2000 kB] 95s Get:134 http://ftpmaster.internal/ubuntu resolute/universe amd64 libspqr4 amd64 1:7.12.1+dfsg-1 [149 kB] 95s Get:135 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsuperlu7 amd64 7.0.1+dfsg1-2 [186 kB] 95s Get:136 http://ftpmaster.internal/ubuntu resolute/universe amd64 libumfpack6 amd64 1:7.12.1+dfsg-1 [298 kB] 95s Get:137 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpetsc-real3.24 amd64 3.24.3+dfsg1-1ubuntu1 [7886 kB] 95s Get:138 http://ftpmaster.internal/ubuntu resolute/universe amd64 libarpack2t64 amd64 3.9.1-6 [108 kB] 95s Get:139 http://ftpmaster.internal/ubuntu resolute/universe amd64 libparpack2t64 amd64 3.9.1-6 [98.7 kB] 95s Get:140 http://ftpmaster.internal/ubuntu resolute/universe amd64 libslepc-real3.24 amd64 3.24.2+dfsg1-1 [1369 kB] 95s Get:141 http://ftpmaster.internal/ubuntu resolute/universe amd64 libspdlog1.15 amd64 1:1.15.3+ds-1 [117 kB] 95s Get:142 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 libdolfinx-real0.10 amd64 1:0.10.0.post5-5build1 [677 kB] 95s Get:143 http://ftpmaster.internal/ubuntu resolute/universe amd64 fenicsx-performance-tests amd64 0.10.0-2 [315 kB] 95s Get:144 http://ftpmaster.internal/ubuntu resolute/universe amd64 fenicsx-performance-tests-source all 0.10.0-2 [17.3 kB] 95s Get:145 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB] 95s Get:146 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran-15-dev amd64 15.2.0-12ubuntu1 [973 kB] 95s Get:147 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [13.6 MB] 96s Get:148 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15 amd64 15.2.0-12ubuntu1 [18.1 kB] 96s Get:149 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1014 B] 96s Get:150 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran amd64 4:15.2.0-4ubuntu1 [1172 B] 96s Get:151 http://ftpmaster.internal/ubuntu resolute/main amd64 icu-devtools amd64 78.2-1ubuntu1 [214 kB] 96s Get:152 http://ftpmaster.internal/ubuntu resolute/main amd64 comerr-dev amd64 2.1-1.47.2-3ubuntu2 [45.0 kB] 96s Get:153 http://ftpmaster.internal/ubuntu resolute/main amd64 libgssrpc4t64 amd64 1.22.1-2 [57.9 kB] 96s Get:154 http://ftpmaster.internal/ubuntu resolute/main amd64 libkadm5clnt-mit12 amd64 1.22.1-2 [40.2 kB] 96s Get:155 http://ftpmaster.internal/ubuntu resolute/main amd64 libkdb5-10t64 amd64 1.22.1-2 [41.6 kB] 96s Get:156 http://ftpmaster.internal/ubuntu resolute/main amd64 libkadm5srv-mit12 amd64 1.22.1-2 [55.0 kB] 96s Get:157 http://ftpmaster.internal/ubuntu resolute/main amd64 krb5-multidev amd64 1.22.1-2 [126 kB] 96s Get:158 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 libadios2-common-c++-dev all 2.11.0+dfsg1-4 [23.2 kB] 96s Get:159 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 libadios2-common-core-dev amd64 2.11.0+dfsg1-4 [132 kB] 96s Get:160 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 libadios2-mpi-auxiliary-dev amd64 2.11.0+dfsg1-4 [17.1 kB] 96s Get:161 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 libadios2-mpi-core-dev amd64 2.11.0+dfsg1-4 [75.2 kB] 96s Get:162 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 libadios2-mpi-c++-dev amd64 2.11.0+dfsg1-4 [4844 B] 96s Get:163 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec0 amd64 1.1.5-1 [22.5 kB] 96s Get:164 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas-dev amd64 3.12.1-7ubuntu1 [235 kB] 96s Get:165 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack-dev amd64 3.12.1-7ubuntu1 [5433 kB] 96s Get:166 http://ftpmaster.internal/ubuntu resolute/universe amd64 libarpack2-dev amd64 3.9.1-6 [123 kB] 96s Get:167 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libpkgconf7 amd64 2.5.1-2 [38.7 kB] 96s Get:168 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 pkgconf-bin amd64 2.5.1-2 [22.8 kB] 96s Get:169 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 pkgconf amd64 2.5.1-2 [20.0 kB] 96s Get:170 http://ftpmaster.internal/ubuntu resolute/universe amd64 libeigen3-dev all 3.4.0-5 [1056 kB] 96s Get:171 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 libbasix-dev amd64 0.10.0.post0-2build1 [65.5 kB] 96s Get:172 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost1.88-dev amd64 1.88.0-1.4ubuntu3 [11.3 MB] 96s Get:173 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-atomic1.88.0 amd64 1.88.0-1.4ubuntu3 [243 kB] 96s Get:174 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-atomic1.88-dev amd64 1.88.0-1.4ubuntu3 [236 kB] 96s Get:175 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-chrono1.88.0 amd64 1.88.0-1.4ubuntu3 [247 kB] 96s Get:176 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-chrono1.88-dev amd64 1.88.0-1.4ubuntu3 [248 kB] 96s Get:177 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-chrono-dev amd64 1.88.0.0ubuntu3 [4994 B] 96s Get:178 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-container1.88.0 amd64 1.88.0-1.4ubuntu3 [265 kB] 96s Get:179 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-container1.88-dev amd64 1.88.0-1.4ubuntu3 [269 kB] 96s Get:180 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-date-time1.88.0 amd64 1.88.0-1.4ubuntu3 [239 kB] 96s Get:181 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-serialization1.88.0 amd64 1.88.0-1.4ubuntu3 [347 kB] 96s Get:182 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-serialization1.88-dev amd64 1.88.0-1.4ubuntu3 [388 kB] 96s Get:183 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-date-time1.88-dev amd64 1.88.0-1.4ubuntu3 [239 kB] 96s Get:184 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-dev amd64 1.88.0.0ubuntu3 [4634 B] 96s Get:185 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-filesystem1.88.0 amd64 1.88.0-1.4ubuntu3 [292 kB] 96s Get:186 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-system1.88.0 amd64 1.88.0-1.4ubuntu3 [239 kB] 96s Get:187 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-system1.88-dev amd64 1.88.0-1.4ubuntu3 [232 kB] 96s Get:188 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-filesystem1.88-dev amd64 1.88.0-1.4ubuntu3 [307 kB] 96s Get:189 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-filesystem-dev amd64 1.88.0.0ubuntu3 [4434 B] 96s Get:190 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-graph1.88.0 amd64 1.88.0-1.4ubuntu3 [369 kB] 96s Get:191 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-regex1.88.0 amd64 1.88.0-1.4ubuntu3 [347 kB] 96s Get:192 http://ftpmaster.internal/ubuntu resolute/main amd64 libicu-dev amd64 78.2-1ubuntu1 [12.5 MB] 96s Get:193 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-regex1.88-dev amd64 1.88.0-1.4ubuntu3 [360 kB] 96s Get:194 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-test1.88.0 amd64 1.88.0-1.4ubuntu3 [462 kB] 96s Get:195 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-test1.88-dev amd64 1.88.0-1.4ubuntu3 [570 kB] 96s Get:196 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-graph1.88-dev amd64 1.88.0-1.4ubuntu3 [400 kB] 96s Get:197 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-random1.88.0 amd64 1.88.0-1.4ubuntu3 [245 kB] 96s Get:198 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-random1.88-dev amd64 1.88.0-1.4ubuntu3 [242 kB] 96s Get:199 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-iostreams1.88.0 amd64 1.88.0-1.4ubuntu3 [262 kB] 96s Get:200 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-iostreams1.88-dev amd64 1.88.0-1.4ubuntu3 [265 kB] 96s Get:201 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-iostreams-dev amd64 1.88.0.0ubuntu3 [4370 B] 97s Get:202 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-math1.88.0 amd64 1.88.0-1.4ubuntu3 [440 kB] 97s Get:203 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-math1.88-dev amd64 1.88.0-1.4ubuntu3 [602 kB] 97s Get:204 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-math-dev amd64 1.88.0.0ubuntu3 [4590 B] 97s Get:205 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-mpi1.88.0 amd64 1.88.0-1.4ubuntu3 [272 kB] 97s Get:206 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libnl-3-dev amd64 3.12.0-2 [104 kB] 97s Get:207 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libnl-route-3-dev amd64 3.12.0-2 [236 kB] 97s Get:208 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libibverbs-dev amd64 61.0-2ubuntu2 [720 kB] 97s Get:209 http://ftpmaster.internal/ubuntu resolute/main amd64 libnuma-dev amd64 2.0.19-1 [37.3 kB] 97s Get:210 http://ftpmaster.internal/ubuntu resolute/main amd64 libltdl7 amd64 2.5.4-9 [43.7 kB] 97s Get:211 http://ftpmaster.internal/ubuntu resolute/main amd64 libltdl-dev amd64 2.5.4-9 [173 kB] 97s Get:212 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhwloc-dev amd64 2.12.2-1 [283 kB] 97s Get:213 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10build1 [155 kB] 97s Get:214 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-extra-2.1-7t64 amd64 2.1.12-stable-10build1 [68.1 kB] 97s Get:215 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-openssl-2.1-7t64 amd64 2.1.12-stable-10build1 [16.7 kB] 97s Get:216 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-dev amd64 2.1.12-stable-10build1 [288 kB] 97s Get:217 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB] 97s Get:218 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB] 97s Get:219 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu3 [895 kB] 97s Get:220 http://ftpmaster.internal/ubuntu resolute/universe amd64 libopenmpi-dev amd64 5.0.8-8ubuntu1 [1226 kB] 97s Get:221 http://ftpmaster.internal/ubuntu resolute/universe amd64 mpi-default-dev amd64 1.20 [3456 B] 97s Get:222 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-mpi1.88-dev amd64 1.88.0-1.4ubuntu3 [297 kB] 97s Get:223 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-mpi-dev amd64 1.88.0.0ubuntu3 [4474 B] 97s Get:224 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-program-options1.88-dev amd64 1.88.0-1.4ubuntu3 [390 kB] 97s Get:225 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-program-options-dev amd64 1.88.0.0ubuntu3 [4420 B] 97s Get:226 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-serialization-dev amd64 1.88.0.0ubuntu3 [4610 B] 97s Get:227 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-thread1.88.0 amd64 1.88.0-1.4ubuntu3 [273 kB] 97s Get:228 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-thread1.88-dev amd64 1.88.0-1.4ubuntu3 [276 kB] 97s Get:229 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-thread-dev amd64 1.88.0.0ubuntu3 [4410 B] 97s Get:230 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-timer1.88.0 amd64 1.88.0-1.4ubuntu3 [243 kB] 97s Get:231 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-timer1.88-dev amd64 1.88.0-1.4ubuntu3 [237 kB] 97s Get:232 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-timer-dev amd64 1.88.0.0ubuntu3 [4510 B] 97s Get:233 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libbrotli1 amd64 1.2.0-1 [343 kB] 97s Get:234 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libbrotli-dev amd64 1.2.0-1 [364 kB] 97s Get:235 http://ftpmaster.internal/ubuntu resolute/main amd64 libidn2-dev amd64 2.3.8-4 [123 kB] 97s Get:236 http://ftpmaster.internal/ubuntu resolute/main amd64 libkrb5-dev amd64 1.22.1-2 [11.9 kB] 97s Get:237 http://ftpmaster.internal/ubuntu resolute/main amd64 libldap-dev amd64 2.6.10+dfsg-1ubuntu5 [315 kB] 97s Get:238 http://ftpmaster.internal/ubuntu resolute/main amd64 libnghttp2-dev amd64 1.64.0-1.1ubuntu1 [120 kB] 97s Get:239 http://ftpmaster.internal/ubuntu resolute/main amd64 libpsl-dev amd64 0.21.2-1.1build2 [78.7 kB] 97s Get:240 http://ftpmaster.internal/ubuntu resolute/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-5ubuntu1 [9956 B] 97s Get:241 http://ftpmaster.internal/ubuntu resolute/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-5ubuntu1 [342 kB] 97s Get:242 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libunbound8 amd64 1.24.2-1ubuntu2 [462 kB] 97s Get:243 http://ftpmaster.internal/ubuntu resolute/main amd64 libgnutls-dane0t64 amd64 3.8.10-3ubuntu1 [24.5 kB] 97s Get:244 http://ftpmaster.internal/ubuntu resolute/main amd64 libgnutls-openssl27t64 amd64 3.8.10-3ubuntu1 [24.8 kB] 97s Get:245 http://ftpmaster.internal/ubuntu resolute/main amd64 libp11-kit-dev amd64 0.25.10-1 [29.3 kB] 97s Get:246 http://ftpmaster.internal/ubuntu resolute/main amd64 libtasn1-6-dev amd64 4.21.0-2 [92.4 kB] 97s Get:247 http://ftpmaster.internal/ubuntu resolute/main amd64 nettle-dev amd64 3.10.2-1 [1176 kB] 97s Get:248 http://ftpmaster.internal/ubuntu resolute/main amd64 libgnutls28-dev amd64 3.8.10-3ubuntu1 [1096 kB] 97s Get:249 http://ftpmaster.internal/ubuntu resolute/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-3 [69.2 kB] 97s Get:250 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libssl-dev amd64 3.5.4-1ubuntu1 [2936 kB] 97s Get:251 http://ftpmaster.internal/ubuntu resolute/main amd64 libssh2-1-dev amd64 1.11.1-1build1 [288 kB] 97s Get:252 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libzstd-dev amd64 1.5.7+dfsg-3 [376 kB] 98s Get:253 http://ftpmaster.internal/ubuntu resolute/main amd64 libcurl4-openssl-dev amd64 8.18.0-1ubuntu1 [543 kB] 98s Get:254 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcxsparse4 amd64 1:7.12.1+dfsg-1 [82.4 kB] 98s Get:255 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB] 98s Get:256 http://ftpmaster.internal/ubuntu resolute/universe amd64 libldl3 amd64 1:7.12.1+dfsg-1 [23.0 kB] 98s Get:257 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsuitesparse-mongoose3 amd64 1:7.12.1+dfsg-1 [42.8 kB] 98s Get:258 http://ftpmaster.internal/ubuntu resolute/universe amd64 librbio4 amd64 1:7.12.1+dfsg-1 [34.3 kB] 98s Get:259 http://ftpmaster.internal/ubuntu resolute/universe amd64 libspex3 amd64 1:7.12.1+dfsg-1 [55.2 kB] 98s Get:260 http://ftpmaster.internal/ubuntu resolute/universe amd64 libparu1 amd64 1:7.12.1+dfsg-1 [61.6 kB] 98s Get:261 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsuitesparse-dev amd64 1:7.12.1+dfsg-1 [1631 kB] 98s Get:262 http://ftpmaster.internal/ubuntu resolute/universe amd64 libptscotcherr-dev amd64 7.0.10-7ubuntu4 [4094 B] 98s Get:263 http://ftpmaster.internal/ubuntu resolute/universe amd64 libscotcherr-dev amd64 7.0.10-7ubuntu4 [4090 B] 98s Get:264 http://ftpmaster.internal/ubuntu resolute/universe amd64 libscotch-dev amd64 7.0.10-7ubuntu4 [1312 kB] 98s Get:265 http://ftpmaster.internal/ubuntu resolute/universe amd64 libptscotch-dev amd64 7.0.10-7ubuntu4 [807 kB] 98s Get:266 http://ftpmaster.internal/ubuntu resolute/universe amd64 libscalapack-openmpi-dev amd64 2.2.2-5 [7488 B] 98s Get:267 http://ftpmaster.internal/ubuntu resolute/universe amd64 libscalapack-mpi-dev amd64 2.2.2-5 [2314 B] 98s Get:268 http://ftpmaster.internal/ubuntu resolute/main amd64 libfftw3-quad3 amd64 3.3.10-2fakesync1build2 [676 kB] 98s Get:269 http://ftpmaster.internal/ubuntu resolute/main amd64 libfftw3-bin amd64 3.3.10-2fakesync1build2 [40.3 kB] 98s Get:270 http://ftpmaster.internal/ubuntu resolute/main amd64 libfftw3-dev amd64 3.3.10-2fakesync1build2 [2393 kB] 98s Get:271 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfftw3-mpi-dev amd64 3.3.10-2fakesync1build2 [66.8 kB] 98s Get:272 http://ftpmaster.internal/ubuntu resolute/main amd64 opencl-c-headers all 3.0~2025.07.22-2build1 [49.4 kB] 98s Get:273 http://ftpmaster.internal/ubuntu resolute/main amd64 opencl-clhpp-headers all 3.0~2025.07.22-1ubuntu1 [52.2 kB] 98s Get:274 http://ftpmaster.internal/ubuntu resolute/main amd64 ocl-icd-opencl-dev amd64 2.3.4-1 [2806 B] 98s Get:275 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-openmpi-fortran-310 amd64 1.14.6+repack-2 [107 kB] 98s Get:276 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-openmpi-hl-310 amd64 1.14.6+repack-2 [59.9 kB] 98s Get:277 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-openmpi-hl-fortran-310 amd64 1.14.6+repack-2 [32.0 kB] 98s Get:278 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-openmpi-cpp-310 amd64 1.14.6+repack-2 [125 kB] 98s Get:279 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-openmpi-hl-cpp-310 amd64 1.14.6+repack-2 [11.9 kB] 98s Get:280 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec-dev amd64 1.1.5-1 [23.5 kB] 98s Get:281 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8 amd64 2.1.5-4ubuntu2 [152 kB] 98s Get:282 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8-dev amd64 2.1.5-4ubuntu2 [296 kB] 98s Get:283 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 98s Get:284 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 98s Get:285 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 98s Get:286 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-openmpi-dev amd64 1.14.6+repack-2 [3489 kB] 98s Get:287 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-mpi-dev amd64 1.14.6+repack-2 [5256 B] 98s Get:288 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsuperlu-dev amd64 7.0.1+dfsg1-2 [20.8 kB] 98s Get:289 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsuperlu-dist-dev amd64 9.2.1+dfsg1-1 [853 kB] 98s Get:290 http://ftpmaster.internal/ubuntu resolute/main amd64 xorg-sgml-doctools all 1:1.11-1.1build1 [10.3 kB] 98s Get:291 http://ftpmaster.internal/ubuntu resolute/main amd64 x11proto-dev all 2024.1-1build1 [606 kB] 98s Get:292 http://ftpmaster.internal/ubuntu resolute/main amd64 libxau-dev amd64 1:1.0.11-1build1 [10.0 kB] 98s Get:293 http://ftpmaster.internal/ubuntu resolute/main amd64 libxdmcp-dev amd64 1:1.1.5-2 [25.7 kB] 98s Get:294 http://ftpmaster.internal/ubuntu resolute/main amd64 xtrans-dev all 1.6.0-1 [66.1 kB] 98s Get:295 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb1-dev amd64 1.17.0-2ubuntu1 [86.3 kB] 98s Get:296 http://ftpmaster.internal/ubuntu resolute/main amd64 libx11-dev amd64 2:1.8.12-1build1 [765 kB] 98s Get:297 http://ftpmaster.internal/ubuntu resolute/main amd64 libyaml-dev amd64 0.2.5-2build2 [65.9 kB] 98s Get:298 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpetsc3.24-dev-common all 3.24.3+dfsg1-1ubuntu1 [323 kB] 98s Get:299 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhypre-dev amd64 3.0.0-5 [2553 kB] 98s Get:300 http://ftpmaster.internal/ubuntu resolute/universe amd64 libmumps-headers-dev all 5.8.1-2ubuntu1 [21.6 kB] 98s Get:301 http://ftpmaster.internal/ubuntu resolute/universe amd64 libmumps-dev amd64 5.8.1-2ubuntu1 [1966 kB] 98s Get:302 http://ftpmaster.internal/ubuntu resolute/main amd64 libc6-dbg amd64 2.42-2ubuntu4 [6149 kB] 99s Get:303 http://ftpmaster.internal/ubuntu resolute/main amd64 valgrind amd64 1:3.25.1-3ubuntu1 [15.6 MB] 99s Get:304 http://ftpmaster.internal/ubuntu resolute/universe amd64 valgrind-mpi amd64 1:3.25.1-3ubuntu1 [43.7 kB] 99s Get:305 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpetsc-real3.24-dev amd64 3.24.3+dfsg1-1ubuntu1 [13.5 MB] 99s Get:306 http://ftpmaster.internal/ubuntu resolute/universe amd64 libparpack2-dev amd64 3.9.1-6 [113 kB] 99s Get:307 http://ftpmaster.internal/ubuntu resolute/universe amd64 libslepc-real3.24-dev amd64 3.24.2+dfsg1-1 [8326 kB] 100s Get:308 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 libdolfinx-real-dev amd64 1:0.10.0.post5-5build1 [5866 B] 100s Get:309 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpugixml-dev amd64 1.14-2build1 [118 kB] 100s Get:310 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfmt-dev amd64 10.1.1+ds1-4build1 [123 kB] 100s Get:311 http://ftpmaster.internal/ubuntu resolute/universe amd64 libspdlog-dev amd64 1:1.15.3+ds-1 [89.8 kB] 100s Get:312 http://ftpmaster.internal/ubuntu resolute/main amd64 liblzma-dev amd64 5.8.2-2 [179 kB] 100s Get:313 http://ftpmaster.internal/ubuntu resolute/main amd64 libxml2-dev amd64 2.15.1+dfsg-2ubuntu1 [709 kB] 100s Get:314 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-ply all 3.11-10 [45.9 kB] 100s Get:315 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-pycparser all 2.23-2 [77.0 kB] 100s Get:316 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-cffi all 2.0.0-2 [75.5 kB] 100s Get:317 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14 amd64 3.14.2-1 [2568 kB] 100s Get:318 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libexpat1-dev amd64 2.7.4-1 [145 kB] 100s Get:319 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-dev amd64 3.14.2-1 [5963 kB] 100s Get:320 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libpython3-dev amd64 3.14.2-1 [11.2 kB] 100s Get:321 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.14-dev amd64 3.14.2-1 [510 kB] 100s Get:322 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-dev amd64 3.14.2-1 [26.6 kB] 100s Get:323 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-ufl all 2025.2.0.post0-3 [155 kB] 100s Get:324 http://ftpmaster.internal/ubuntu resolute/universe amd64 robin-map-dev all 1.4.1-1 [30.1 kB] 100s Get:325 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 nanobind-dev all 2.10.2-2 [150 kB] 100s Get:326 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 python3-nanobind all 2.10.2-2 [17.3 kB] 100s Get:327 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 python3-basix amd64 0.10.0.post0-2build1 [149 kB] 100s Get:328 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-ffcx all 1:0.10.1-3 [92.2 kB] 100s Get:329 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 libdolfinx-dev amd64 1:0.10.0.post5-5build1 [185 kB] 100s Fetched 331 MB in 9s (35.7 MB/s) 100s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83956 files and directories currently installed.) 100s Preparing to unpack .../libexpat1_2.7.4-1_amd64.deb ... 100s Unpacking libexpat1:amd64 (2.7.4-1) over (2.7.3-1) ... 100s Preparing to unpack .../libzstd1_1.5.7+dfsg-3_amd64.deb ... 100s Unpacking libzstd1:amd64 (1.5.7+dfsg-3) over (1.5.7+dfsg-2) ... 100s Setting up libzstd1:amd64 (1.5.7+dfsg-3) ... 100s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83956 files and directories currently installed.) 100s Preparing to unpack .../zlib1g_1%3a1.3.dfsg+really1.3.1-1ubuntu3_amd64.deb ... 100s Unpacking zlib1g:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu3) over (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 100s Setting up zlib1g:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu3) ... 101s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83956 files and directories currently installed.) 101s Preparing to unpack .../libssl3t64_3.5.4-1ubuntu1_amd64.deb ... 101s Unpacking libssl3t64:amd64 (3.5.4-1ubuntu1) over (3.5.3-1ubuntu2) ... 101s Setting up libssl3t64:amd64 (3.5.4-1ubuntu1) ... 101s Selecting previously unselected package libpython3.14-minimal:amd64. 101s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83956 files and directories currently installed.) 101s Preparing to unpack .../libpython3.14-minimal_3.14.2-1_amd64.deb ... 101s Unpacking libpython3.14-minimal:amd64 (3.14.2-1) ... 101s Selecting previously unselected package python3.14-minimal. 101s Preparing to unpack .../python3.14-minimal_3.14.2-1_amd64.deb ... 101s Unpacking python3.14-minimal (3.14.2-1) ... 101s Setting up libpython3.14-minimal:amd64 (3.14.2-1) ... 101s Setting up libexpat1:amd64 (2.7.4-1) ... 101s Setting up python3.14-minimal (3.14.2-1) ... 101s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84298 files and directories currently installed.) 101s Preparing to unpack .../python3-minimal_3.14.2-1_amd64.deb ... 101s Unpacking python3-minimal (3.14.2-1) over (3.13.9-3) ... 101s Setting up python3-minimal (3.14.2-1) ... 101s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 84298 files and directories currently installed.) 101s Preparing to unpack .../000-python3_3.14.2-1_amd64.deb ... 101s Unpacking python3 (3.14.2-1) over (3.13.9-3) ... 101s Selecting previously unselected package libpython3.14-stdlib:amd64. 101s Preparing to unpack .../001-libpython3.14-stdlib_3.14.2-1_amd64.deb ... 101s Unpacking libpython3.14-stdlib:amd64 (3.14.2-1) ... 102s Selecting previously unselected package python3.14. 102s Preparing to unpack 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previously unselected package libcrypt-dev:amd64. 103s Preparing to unpack .../020-libcrypt-dev_1%3a4.5.1-1_amd64.deb ... 103s Unpacking libcrypt-dev:amd64 (1:4.5.1-1) ... 103s Selecting previously unselected package rpcsvc-proto. 103s Preparing to unpack .../021-rpcsvc-proto_1.4.3-1_amd64.deb ... 103s Unpacking rpcsvc-proto (1.4.3-1) ... 103s Selecting previously unselected package libc6-dev:amd64. 103s Preparing to unpack .../022-libc6-dev_2.42-2ubuntu4_amd64.deb ... 103s Unpacking libc6-dev:amd64 (2.42-2ubuntu4) ... 103s Selecting previously unselected package libisl23:amd64. 103s Preparing to unpack .../023-libisl23_0.27-1build1_amd64.deb ... 103s Unpacking libisl23:amd64 (0.27-1build1) ... 103s Selecting previously unselected package libmpc3:amd64. 103s Preparing to unpack .../024-libmpc3_1.3.1-2_amd64.deb ... 103s Unpacking libmpc3:amd64 (1.3.1-2) ... 103s Selecting previously unselected package cpp-15-x86-64-linux-gnu. 103s Preparing to unpack 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g++-x86-64-linux-gnu. 103s Preparing to unpack .../046-g++-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 103s Unpacking g++-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 103s Selecting previously unselected package g++. 103s Preparing to unpack .../047-g++_4%3a15.2.0-4ubuntu1_amd64.deb ... 103s Unpacking g++ (4:15.2.0-4ubuntu1) ... 103s Selecting previously unselected package build-essential. 103s Preparing to unpack .../048-build-essential_12.12ubuntu2_amd64.deb ... 103s Unpacking build-essential (12.12ubuntu2) ... 103s Selecting previously unselected package cmake-data. 103s Preparing to unpack .../049-cmake-data_4.1.1+really3.31.6-2ubuntu1_all.deb ... 103s Unpacking cmake-data (4.1.1+really3.31.6-2ubuntu1) ... 103s Selecting previously unselected package libjsoncpp26:amd64. 103s Preparing to unpack .../050-libjsoncpp26_1.9.6-5_amd64.deb ... 103s Unpacking libjsoncpp26:amd64 (1.9.6-5) ... 103s Selecting previously unselected package librhash1:amd64. 103s Preparing to unpack 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libzfp1t64:amd64 (1.0.1-4build4) ... 104s Selecting previously unselected package libnorm1t64:amd64. 104s Preparing to unpack .../093-libnorm1t64_1.5.9+dfsg-4_amd64.deb ... 104s Unpacking libnorm1t64:amd64 (1.5.9+dfsg-4) ... 104s Selecting previously unselected package libpgm-5.3-0t64:amd64. 104s Preparing to unpack .../094-libpgm-5.3-0t64_5.3.128~dfsg-2.1build2_amd64.deb ... 104s Unpacking libpgm-5.3-0t64:amd64 (5.3.128~dfsg-2.1build2) ... 104s Selecting previously unselected package libsodium23:amd64. 104s Preparing to unpack .../095-libsodium23_1.0.18-2_amd64.deb ... 104s Unpacking libsodium23:amd64 (1.0.18-2) ... 104s Selecting previously unselected package libzmq5:amd64. 104s Preparing to unpack .../096-libzmq5_4.3.5-1build3_amd64.deb ... 104s Unpacking libzmq5:amd64 (4.3.5-1build3) ... 104s Selecting previously unselected package libadios2-mpi-plugins:amd64. 104s Preparing to unpack .../097-libadios2-mpi-plugins_2.11.0+dfsg1-4_amd64.deb ... 104s Unpacking libadios2-mpi-plugins:amd64 (2.11.0+dfsg1-4) ... 104s Selecting previously unselected package libadios2-mpi-core-2.11:amd64. 104s Preparing to unpack .../098-libadios2-mpi-core-2.11_2.11.0+dfsg1-4_amd64.deb ... 104s Unpacking libadios2-mpi-core-2.11:amd64 (2.11.0+dfsg1-4) ... 104s Selecting previously unselected package libadios2-mpi-c++-2.11:amd64. 104s Preparing to unpack .../099-libadios2-mpi-c++-2.11_2.11.0+dfsg1-4_amd64.deb ... 104s Unpacking libadios2-mpi-c++-2.11:amd64 (2.11.0+dfsg1-4) ... 104s Selecting previously unselected package libfmt10:amd64. 104s Preparing to unpack .../100-libfmt10_10.1.1+ds1-4build1_amd64.deb ... 104s Unpacking libfmt10:amd64 (10.1.1+ds1-4build1) ... 104s Selecting previously unselected package libsuitesparseconfig7:amd64. 104s Preparing to unpack .../101-libsuitesparseconfig7_1%3a7.12.1+dfsg-1_amd64.deb ... 104s Unpacking libsuitesparseconfig7:amd64 (1:7.12.1+dfsg-1) ... 104s Selecting previously unselected package libamd3:amd64. 104s Preparing to 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unselected package opencl-c-headers. 108s Preparing to unpack .../264-opencl-c-headers_3.0~2025.07.22-2build1_all.deb ... 108s Unpacking opencl-c-headers (3.0~2025.07.22-2build1) ... 108s Selecting previously unselected package opencl-clhpp-headers. 108s Preparing to unpack .../265-opencl-clhpp-headers_3.0~2025.07.22-1ubuntu1_all.deb ... 108s Unpacking opencl-clhpp-headers (3.0~2025.07.22-1ubuntu1) ... 108s Selecting previously unselected package ocl-icd-opencl-dev:amd64. 108s Preparing to unpack .../266-ocl-icd-opencl-dev_2.3.4-1_amd64.deb ... 108s Unpacking ocl-icd-opencl-dev:amd64 (2.3.4-1) ... 108s Selecting previously unselected package libhdf5-openmpi-fortran-310:amd64. 108s Preparing to unpack .../267-libhdf5-openmpi-fortran-310_1.14.6+repack-2_amd64.deb ... 108s Unpacking libhdf5-openmpi-fortran-310:amd64 (1.14.6+repack-2) ... 108s Selecting previously unselected package libhdf5-openmpi-hl-310:amd64. 108s Preparing to unpack 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libbrotli-dev:amd64 (1.2.0-1) ... 110s Setting up libfmt10:amd64 (10.1.1+ds1-4build1) ... 110s Setting up liblsan0:amd64 (15.2.0-12ubuntu1) ... 110s Setting up libhsakmt1:amd64 (7.1.0+dfsg-0ubuntu5) ... 110s Setting up libp11-kit-dev:amd64 (0.25.10-1) ... 110s Setting up libblas-dev:amd64 (3.12.1-7ubuntu1) ... 110s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode 110s Setting up libsz2:amd64 (1.1.5-1) ... 110s Setting up libitm1:amd64 (15.2.0-12ubuntu1) ... 110s Setting up libpython3-stdlib:amd64 (3.14.2-1) ... 110s Setting up libkadm5clnt-mit12:amd64 (1.22.1-2) ... 110s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 110s Setting up automake (1:1.18.1-3build1) ... 110s update-alternatives: using /usr/bin/automake-1.18 to provide /usr/bin/automake (automake) in auto mode 110s Setting up x11proto-dev (2024.1-1build1) ... 110s Setting up libfile-stripnondeterminism-perl (1.15.0-1build1) ... 110s Setting up liblapack3:amd64 (3.12.1-7ubuntu1) ... 110s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 110s Setting up gettext (0.23.2-1) ... 110s Setting up libarpack2t64:amd64 (3.9.1-6) ... 110s Setting up libfftw3-single3:amd64 (3.3.10-2fakesync1build2) ... 110s Setting up libgcc-15-dev:amd64 (15.2.0-12ubuntu1) ... 110s Setting up libgmp-dev:amd64 (2:6.3.0+dfsg-5ubuntu1) ... 110s Setting up libamd3:amd64 (1:7.12.1+dfsg-1) ... 110s Setting up libzmq5:amd64 (4.3.5-1build3) ... 110s Setting up libxau-dev:amd64 (1:1.0.11-1build1) ... 110s Setting up nettle-dev:amd64 (3.10.2-1) ... 110s Setting up libkdb5-10t64:amd64 (1.22.1-2) ... 110s Setting up libcolamd3:amd64 (1:7.12.1+dfsg-1) ... 110s Setting up libspex3:amd64 (1:7.12.1+dfsg-1) ... 110s Setting up libscotch-7.0c:amd64 (7.0.10-7ubuntu4) ... 110s Setting up libsuitesparse-mongoose3:amd64 (1:7.12.1+dfsg-1) ... 110s Setting up libpugixml-dev:amd64 (1.14-2build1) ... 110s Setting up libaec-dev:amd64 (1.1.5-1) ... 110s Setting up libcxsparse4:amd64 (1:7.12.1+dfsg-1) ... 110s Setting up libfftw3-long3:amd64 (3.3.10-2fakesync1build2) ... 110s Setting up python3 (3.14.2-1) ... 110s /usr/share/petsc/3.24/lib/petsc/bin/petsc_tas_analysis.py:779: SyntaxWarning: "\l" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\l"? A raw string is also an option. 110s axMeshConv.set(xlabel='Problem Size $\log N$', ylabel='Error $\log |x - x^*|$', title='Mesh Convergence') 110s /usr/share/petsc/3.24/lib/petsc/bin/petsc_tas_analysis.py:779: SyntaxWarning: "\l" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\l"? A raw string is also an option. 110s axMeshConv.set(xlabel='Problem Size $\log N$', ylabel='Error $\log |x - x^*|$', title='Mesh Convergence') 110s /usr/share/petsc/3.24/lib/petsc/bin/petsclogformat.py:252: SyntaxWarning: "\d" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\d"? A raw string is also an option. 110s print("\documentclass{article}") 110s /usr/share/petsc/3.24/lib/petsc/bin/petsclogformat.py:255: SyntaxWarning: "\c" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\c"? A raw string is also an option. 110s print("\centering") 110s /usr/share/petsc/3.24/lib/petsc/bin/petsclogformat.py:258: SyntaxWarning: "\m" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\m"? A raw string is also an option. 110s print(" & & \multicolumn{4}{c}{--------------- Percent of -------------} & \\\\") 110s /usr/share/petsc/3.24/lib/petsc/bin/petsclogformat.py:260: SyntaxWarning: "\h" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\h"? A raw string is also an option. 110s print("\hline") 110s /usr/share/petsc/3.24/lib/petsc/bin/petsclogformat.py:320: SyntaxWarning: "\e" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\e"? A raw string is also an option. 110s print("\end{tabular}") 110s /usr/share/petsc/3.24/lib/petsc/bin/petsclogformat.py:321: SyntaxWarning: "\e" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\e"? A raw string is also an option. 110s print("\end{table}") 110s /usr/share/petsc/3.24/lib/petsc/bin/petsclogformat.py:322: SyntaxWarning: "\e" is an invalid escape sequence. Such sequences will not work in the future. Did you mean "\\e"? A raw string is also an option. 110s print("\end{document}") 110s Setting up cpp-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 110s Setting up libhwloc-plugins:amd64 (2.12.2-1) ... 110s Setting up libgfortran-15-dev:amd64 (15.2.0-12ubuntu1) ... 110s Setting up libcamd3:amd64 (1:7.12.1+dfsg-1) ... 110s Setting up libsuperlu7:amd64 (7.0.1+dfsg1-2) ... 110s Setting up pkgconf:amd64 (2.5.1-2) ... 110s Setting up intltool-debian (0.35.0+20060710.6build1) ... 110s Setting up libnl-route-3-200:amd64 (3.12.0-2) ... 110s Setting up gcc-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 110s Setting up libltdl-dev:amd64 (2.5.4-9) ... 110s Setting up libxdmcp-dev:amd64 (1:1.1.5-2) ... 110s Setting up libjs-jquery-ui (1.13.2+dfsg-1build1) ... 110s Setting up librbio4:amd64 (1:7.12.1+dfsg-1) ... 110s Setting up libfftw3-quad3:amd64 (3.3.10-2fakesync1build2) ... 111s Setting up opencl-clhpp-headers (3.0~2025.07.22-1ubuntu1) ... 111s Setting up libevent-dev (2.1.12-stable-10build1) ... 111s Setting up liblapack-dev:amd64 (3.12.1-7ubuntu1) ... 111s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode 111s Setting up libeigen3-dev (3.4.0-5) ... 111s Setting up libfmt-dev:amd64 (10.1.1+ds1-4build1) ... 111s Setting up libspdlog1.15:amd64 (1:1.15.3+ds-1) ... 111s Setting up python3-numpy (1:2.3.5+ds-3) ... 113s Setting up ocl-icd-opencl-dev:amd64 (2.3.4-1) ... 113s Setting up libccolamd3:amd64 (1:7.12.1+dfsg-1) ... 113s Setting up dh-strip-nondeterminism (1.15.0-1build1) ... 113s Setting up libnl-3-dev:amd64 (3.12.0-2) ... 113s Setting up cpp-15 (15.2.0-12ubuntu1) ... 113s Setting up libhsa-runtime64-1:amd64 (7.1.0+dfsg-0ubuntu5) ... 113s Setting up libbasix0.10:amd64 (0.10.0.post0-2build1) ... 113s Setting up libkadm5srv-mit12:amd64 (1.22.1-2) ... 113s Setting up cmake (4.1.1+really3.31.6-2ubuntu1) ... 113s Setting up libc6-dev:amd64 (2.42-2ubuntu4) ... 113s Setting up libsuperlu-dev:amd64 (7.0.1+dfsg1-2) ... 113s Setting up libbasix-dev:amd64 (0.10.0.post0-2build1) ... 113s Setting up libicu-dev:amd64 (78.2-1ubuntu1) ... 113s Setting up cpp-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 113s Setting up libgnutls28-dev:amd64 (3.8.10-3ubuntu1) ... 113s Setting up gfortran-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 113s Setting up libnghttp2-dev:amd64 (1.64.0-1.1ubuntu1) ... 113s Setting up libibverbs1:amd64 (61.0-2ubuntu2) ... 113s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-4ubuntu2) ... 113s Setting up libcholmod5:amd64 (1:7.12.1+dfsg-1) ... 113s Setting up libarpack2-dev:amd64 (3.9.1-6) ... 113s Setting up libxcb1-dev:amd64 (1.17.0-2ubuntu1) ... 113s Setting up python3-ufl (2025.2.0.post0-3) ... 113s Setting up gcc-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 113s Setting up ibverbs-providers:amd64 (61.0-2ubuntu2) ... 113s Setting up libspqr4:amd64 (1:7.12.1+dfsg-1) ... 113s Setting up libfftw3-bin (3.3.10-2fakesync1build2) ... 113s Setting up po-debconf (1.0.22) ... 113s Setting up python3-ply (3.11-10) ... 113s Setting up nanobind-dev (2.10.2-2) ... 113s Setting up libx11-dev:amd64 (2:1.8.12-1build1) ... 113s Setting up libspdlog-dev:amd64 (1:1.15.3+ds-1) ... 113s Setting up gfortran-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 113s Setting up python3-pycparser (2.23-2) ... 113s Setting up libnuma-dev:amd64 (2.0.19-1) ... 113s Setting up libnl-route-3-dev:amd64 (3.12.0-2) ... 113s Setting up gcc-15 (15.2.0-12ubuntu1) ... 113s Setting up libstdc++-15-dev:amd64 (15.2.0-12ubuntu1) ... 113s Setting up libexpat1-dev:amd64 (2.7.4-1) ... 113s Setting up libklu2:amd64 (1:7.12.1+dfsg-1) ... 113s Setting up libamdhip64-6:amd64 (6.4.3-4) ... 113s Setting up comerr-dev:amd64 (2.1-1.47.2-3ubuntu2) ... 113s Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu3) ... 113s Setting up libumfpack6:amd64 (1:7.12.1+dfsg-1) ... 113s Setting up cpp (4:15.2.0-4ubuntu1) ... 113s Setting up librdmacm1t64:amd64 (61.0-2ubuntu2) ... 113s Setting up libpython3.14-dev:amd64 (3.14.2-1) ... 113s Setting up libhwloc-dev:amd64 (2.12.2-1) ... 113s Setting up libjpeg8-dev:amd64 (8c-2ubuntu11) ... 113s Setting up libfftw3-dev:amd64 (3.3.10-2fakesync1build2) ... 113s Setting up gfortran-15 (15.2.0-12ubuntu1) ... 113s Setting up krb5-multidev:amd64 (1.22.1-2) ... 113s Setting up libfabric1:amd64 (2.1.0-1.1) ... 113s Setting up g++-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 113s Setting up libucx0:amd64 (1.20.0+ds-4ubuntu1) ... 113s Setting up python3-nanobind (2.10.2-2) ... 113s Setting up libpython3-dev:amd64 (3.14.2-1) ... 113s Setting up python3.14-dev (3.14.2-1) ... 113s Setting up libtool (2.5.4-9) ... 113s Setting up libboost1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 113s Setting up libboost-atomic1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 113s Setting up python3-cffi (2.0.0-2) ... 114s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ... 114s Setting up libboost-math1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 114s Setting up libibverbs-dev:amd64 (61.0-2ubuntu2) ... 114s Setting up libparu1:amd64 (1:7.12.1+dfsg-1) ... 114s Setting up gcc (4:15.2.0-4ubuntu1) ... 114s Setting up dh-autoreconf (21) ... 114s Setting up libkrb5-dev:amd64 (1.22.1-2) ... 114s Setting up libxml2-dev:amd64 (2.15.1+dfsg-2ubuntu1) ... 114s Setting up libboost-container1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 114s Setting up python3-dev (3.14.2-1) ... 114s Setting up librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-3) ... 114s Setting up libboost-program-options1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 114s Setting up libssh2-1-dev:amd64 (1.11.1-1build1) ... 114s Setting up libboost-chrono1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 114s Setting up libboost-timer1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 114s Setting up g++-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 114s Setting up libboost-dev:amd64 (1.88.0.0ubuntu3) ... 114s Setting up g++-15 (15.2.0-12ubuntu1) ... 114s Setting up libboost-timer-dev:amd64 (1.88.0.0ubuntu3) ... 114s Setting up python3-basix (0.10.0.post0-2build1) ... 114s Setting up libboost-serialization1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 114s Setting up libopenmpi40:amd64 (5.0.8-8ubuntu1) ... 114s Setting up libboost-regex1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 114s Setting up libboost-system1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 114s Setting up libsuitesparse-dev:amd64 (1:7.12.1+dfsg-1) ... 114s Setting up libboost-chrono-dev:amd64 (1.88.0.0ubuntu3) ... 114s Setting up libboost-test1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 114s Setting up libboost-math-dev:amd64 (1.88.0.0ubuntu3) ... 114s Setting up libboost-filesystem1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 114s Setting up debhelper (13.28ubuntu1) ... 114s Setting up libcombblas2.0.0t64:amd64 (2.0.0-7) ... 114s Setting up libfftw3-mpi3:amd64 (3.3.10-2fakesync1build2) ... 114s Setting up libboost-date-time1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 114s Setting up libhdf5-openmpi-310:amd64 (1.14.6+repack-2) ... 114s Setting up gfortran (4:15.2.0-4ubuntu1) ... 114s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 114s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 114s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 114s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 114s Setting up python3-ffcx (1:0.10.1-3) ... 114s Setting up libhdf5-openmpi-fortran-310:amd64 (1.14.6+repack-2) ... 114s Setting up libboost-program-options-dev:amd64 (1.88.0.0ubuntu3) ... 114s Setting up libcurl4-openssl-dev:amd64 (8.18.0-1ubuntu1) ... 114s Setting up libboost-mpi1.88.0 (1.88.0-1.4ubuntu3) ... 114s Setting up libptscotch-7.0c:amd64 (7.0.10-7ubuntu4) ... 114s Setting up libboost-serialization-dev:amd64 (1.88.0.0ubuntu3) ... 114s Setting up g++ (4:15.2.0-4ubuntu1) ... 114s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 114s Setting up libparpack2t64:amd64 (3.9.1-6) ... 114s Setting up build-essential (12.12ubuntu2) ... 114s Setting up libboost-thread1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 114s Setting up libboost-filesystem-dev:amd64 (1.88.0.0ubuntu3) ... 114s Setting up openmpi-bin (5.0.8-8ubuntu1) ... 114s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 114s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 114s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 114s Setting up libboost-thread-dev:amd64 (1.88.0.0ubuntu3) ... 114s Setting up libboost-random1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 114s Setting up libhdf5-openmpi-hl-310:amd64 (1.14.6+repack-2) ... 114s Setting up libhdf5-openmpi-hl-fortran-310:amd64 (1.14.6+repack-2) ... 114s Setting up libboost-graph1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 114s Setting up libsuperlu-dist9:amd64 (9.2.1+dfsg1-1) ... 114s Setting up libhdf5-openmpi-hl-cpp-310:amd64 (1.14.6+repack-2) ... 114s Setting up libhdf5-openmpi-cpp-310:amd64 (1.14.6+repack-2) ... 114s Setting up libfftw3-mpi-dev:amd64 (3.3.10-2fakesync1build2) ... 114s Setting up mpi-default-bin (1.20) ... 114s Setting up libboost-iostreams1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 114s Setting up libhypre-3.0.0:amd64 (3.0.0-5) ... 114s Setting up libboost-iostreams-dev:amd64 (1.88.0.0ubuntu3) ... 114s Setting up libsuperlu-dist-dev:amd64 (9.2.1+dfsg1-1) ... 114s Setting up libopenmpi-dev:amd64 (5.0.8-8ubuntu1) ... 114s update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode 114s Setting up libhdf5-openmpi-dev (1.14.6+repack-2) ... 114s update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode 114s update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 114s update-alternatives: updating alternative /usr/bin/mpicc.openmpi because link group mpi has changed slave links 114s update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-mpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 114s Setting up libscalapack-openmpi2.2:amd64 (2.2.2-5) ... 114s Setting up libmumps-5.8:amd64 (5.8.1-2ubuntu1) ... 114s Setting up libpetsc-real3.24:amd64 (3.24.3+dfsg1-1ubuntu1) ... 114s update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.3 to provide /usr/lib/x86_64-linux-gnu/libpetsc.so.3.24 (libpetsc.so.3.24) in auto mode 114s Setting up libslepc-real3.24 (3.24.2+dfsg1-1) ... 114s update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.24.2 to provide /usr/lib/x86_64-linux-gnu/libslepc.so.3.24 (libslepc.so.3.24) in auto mode 114s Setting up libscalapack-openmpi-dev:amd64 (2.2.2-5) ... 114s Setting up mpi-default-dev (1.20) ... 114s Setting up libscalapack-mpi-dev:amd64 (2.2.2-5) ... 114s Setting up libmumps-dev:amd64 (5.8.1-2ubuntu1) ... 114s Setting up libscotch-dev:amd64 (7.0.10-7ubuntu4) ... 114s Setting up libboost-mpi1.88-dev (1.88.0-1.4ubuntu3) ... 114s Setting up libparpack2-dev:amd64 (3.9.1-6) ... 114s Setting up libhypre-dev:amd64 (3.0.0-5) ... 114s Setting up libptscotch-dev:amd64 (7.0.10-7ubuntu4) ... 114s Setting up libboost-mpi-dev (1.88.0.0ubuntu3) ... 114s Setting up libhdf5-mpi-dev:amd64 (1.14.6+repack-2) ... 114s Setting up libpetsc3.24-dev-common (3.24.3+dfsg1-1ubuntu1) ... 114s Setting up libpetsc-real3.24-dev:amd64 (3.24.3+dfsg1-1ubuntu1) ... 114s update-alternatives: error: no alternatives for petsc 114s update-alternatives: using /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real to provide /usr/lib/petsc (petsc) in auto mode 114s update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.3 to provide /usr/lib/x86_64-linux-gnu/libpetsc_real.so (libpetsc_real.so) in auto mode 114s update-alternatives: using /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real to provide /usr/lib/petscdir/3.24 (petsc3.24) in auto mode 114s Setting up libslepc-real3.24-dev (3.24.2+dfsg1-1) ... 114s update-alternatives: error: no alternatives for slepc 114s update-alternatives: using /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real to provide /usr/lib/slepc (slepc) in auto mode 114s update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.24.2 to provide /usr/lib/x86_64-linux-gnu/libslepc_real.so (libslepc_real.so) in auto mode 114s update-alternatives: using /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real to provide /usr/lib/slepcdir/3.24 (slepc3.24) in auto mode 114s Setting up libadios2-mpi-plugins:amd64 (2.11.0+dfsg1-4) ... 114s Setting up libadios2-mpi-c-2.11:amd64 (2.11.0+dfsg1-4) ... 114s Setting up libadios2-mpi-auxiliary-2.11:amd64 (2.11.0+dfsg1-4) ... 114s Setting up libadios2-mpi-auxiliary-dev:amd64 (2.11.0+dfsg1-4) ... 114s Setting up libadios2-mpi-core-2.11:amd64 (2.11.0+dfsg1-4) ... 114s Setting up libadios2-mpi-core-dev:amd64 (2.11.0+dfsg1-4) ... 114s Setting up libadios2-mpi-c++-2.11:amd64 (2.11.0+dfsg1-4) ... 114s Setting up libdolfinx-real0.10:amd64 (1:0.10.0.post5-5build1) ... 114s Setting up libadios2-mpi-c++-dev:amd64 (2.11.0+dfsg1-4) ... 114s Setting up libdolfinx-real-dev:amd64 (1:0.10.0.post5-5build1) ... 114s Setting up fenicsx-performance-tests (0.10.0-2) ... 114s Setting up libdolfinx-dev:amd64 (1:0.10.0.post5-5build1) ... 114s Processing triggers for install-info (7.2-5) ... 114s Processing triggers for libc-bin (2.42-2ubuntu4) ... 114s Processing triggers for systemd (259-1ubuntu3) ... 114s Processing triggers for man-db (2.13.1-1) ... 117s autopkgtest [05:34:41]: test dolfinx-performance-test-binary: [----------------------- 117s ==== elasticity weak scaling (2 processes with ndofs=10000) ==== 117s [2026-02-02 05:34:41.276] [RANK: 0] [info] Using partitioner with cell data (1 cell types) 117s [2026-02-02 05:34:41.276] [RANK: 0] [info] Compute partition of cells across ranks 117s [2026-02-02 05:34:41.276] [RANK: 0] [info] Building mesh dual graph 117s [2026-02-02 05:34:41.276] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 117s [2026-02-02 05:34:41.284] [RANK: 0] [info] Build nonlocal part of mesh dual graph 117s [2026-02-02 05:34:41.285] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 117s [2026-02-02 05:34:41.285] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 117s [2026-02-02 05:34:41.285] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 1, 1 117s [2026-02-02 05:34:41.285] [RANK: 0] [info] Graph edges (local: 65536, non-local: 578) 117s [2026-02-02 05:34:41.285] [RANK: 0] [info] Compute graph partition using PT-SCOTCH 118s [2026-02-02 05:34:41.940] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 118s [2026-02-02 05:34:41.946] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 118s [2026-02-02 05:34:41.964] [RANK: 0] [info] Extract basic topology: 68040->68040 118s [2026-02-02 05:34:41.964] [RANK: 0] [info] Build local dual graphs, re-order cells, and compute process boundary vertices. 118s [2026-02-02 05:34:41.964] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 118s [2026-02-02 05:34:41.980] [RANK: 0] [info] GPS pseudo-diameter:(104) 16907-4680 118s [2026-02-02 05:34:41.981] [RANK: 0] [info] Create topology (generalised) 118s [2026-02-02 05:34:41.983] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 118s [2026-02-02 05:34:41.990] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 118s [2026-02-02 05:34:42.013] [RANK: 0] [info] Compute ghost indices 118s [2026-02-02 05:34:42.013] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 118s [2026-02-02 05:34:42.013] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 118s [2026-02-02 05:34:42.014] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 118s [2026-02-02 05:34:42.014] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 118s [2026-02-02 05:34:42.016] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 118s [2026-02-02 05:34:42.016] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 118s [2026-02-02 05:34:42.016] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 118s [2026-02-02 05:34:42.017] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 118s [2026-02-02 05:34:42.017] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 118s [2026-02-02 05:34:42.017] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 118s [2026-02-02 05:34:42.017] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 118s [2026-02-02 05:34:42.017] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 118s [2026-02-02 05:34:42.018] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 118s [2026-02-02 05:34:42.018] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 1, 0.5 118s [2026-02-02 05:34:42.018] [RANK: 0] [info] Create Geometry (multiple) 118s [2026-02-02 05:34:42.018] [RANK: 0] [info] Got 1 dof layouts 118s [2026-02-02 05:34:42.018] [RANK: 0] [info] Checking required entities per dimension 118s [2026-02-02 05:34:42.018] [RANK: 0] [info] Cell type: 0 dofmap: 17010x4 118s [2026-02-02 05:34:42.019] [RANK: 0] [info] Global index computation 118s [2026-02-02 05:34:42.019] [RANK: 0] [info] Got 1 index_maps 118s [2026-02-02 05:34:42.019] [RANK: 0] [info] Get global indices 118s [2026-02-02 05:34:42.019] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 118s [2026-02-02 05:34:42.019] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 118s [2026-02-02 05:34:42.019] [RANK: 0] [info] Calling compute_local_to_global 118s [2026-02-02 05:34:42.019] [RANK: 0] [info] xdofs.size = 68040 118s [2026-02-02 05:34:42.019] [RANK: 0] [info] dofmap sizes = 68040 118s [2026-02-02 05:34:42.019] [RANK: 0] [info] all_dofmaps.size = 68040 118s [2026-02-02 05:34:42.019] [RANK: 0] [info] nodes.size = 3501 118s [2026-02-02 05:34:42.020] [RANK: 0] [info] Creating geometry with 1 dofmaps 118s UnitCube (18x15x21) to be refined 0 times 118s [2026-02-02 05:34:42.020] [RANK: 0] [info] Computing mesh entities of dimension 2 118s [2026-02-02 05:34:42.025] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 118s [2026-02-02 05:34:42.025] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 118s [2026-02-02 05:34:42.033] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 118s [2026-02-02 05:34:42.033] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 118s [2026-02-02 05:34:42.033] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 118s [2026-02-02 05:34:42.033] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. 118s [2026-02-02 05:34:42.034] [RANK: 0] [info] Checking required entities per dimension 118s [2026-02-02 05:34:42.034] [RANK: 0] [info] Cell type: 0 dofmap: 17010x4 118s [2026-02-02 05:34:42.034] [RANK: 0] [info] Global index computation 118s [2026-02-02 05:34:42.034] [RANK: 0] [info] Got 1 index_maps 118s [2026-02-02 05:34:42.034] [RANK: 0] [info] Get global indices 118s [2026-02-02 05:34:42.035] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 118s [2026-02-02 05:34:42.035] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 118s [2026-02-02 05:34:42.035] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) 118s [2026-02-02 05:34:42.041] [RANK: 0] [info] Column ghost size increased from 159 to 420 118s ---------------------------------------------------------------- 118s Test problem summary 118s dolfinx version: 0.10.0 118s dolfinx hash: ubuntu 118s ufl hash: 58f3dc30e5e56245b795ae796fe6a103649e8345 118s petsc version: PETSc Release Version 3.24.3, Jan 01, 2026 118s Problem type: elasticity 118s Scaling type: weak 118s Num processes: 2 118s Num cells: 34020 (34 thousand) 118s Total degrees of freedom: 20064 (20.1 thousand) 118s Average degrees of freedom per process: 10032 118s ---------------------------------------------------------------- 118s [2026-02-02 05:34:42.081] [RANK: 0] [info] PETSc Krylov solver starting to solve system. 118s KSP Object: 2 MPI processes 118s type: cg 118s maximum iterations=10000, initial guess is zero 118s tolerances: relative=1e-08, absolute=1e-50, divergence=10000. 118s left preconditioning 118s using PRECONDITIONED norm type for convergence test 118s PC Object: 2 MPI processes 118s type: gamg 118s type is MULTIPLICATIVE, levels=3 cycles=v 118s Cycles per PCApply=1 118s Using externally compute Galerkin coarse grid matrices 118s GAMG specific options 118s Threshold for dropping small values in graph on each level = -1. -1. -1. 118s Threshold scaling factor for each level not specified = 1. 118s AGG specific options 118s Number of levels of aggressive coarsening 1 118s Square graph aggressive coarsening 118s MatCoarsen Object: 2 MPI processes 118s type: misk 118s Number smoothing steps to construct prolongation 1 118s Complexity: grid = 1.09629 operator = 1.3701 118s Per-level complexity: op = operator, int = interpolation 118s #equations | #active PEs | avg nnz/row op | avg nnz/row int 118s 156 1 142 0 118s 1776 2 161 35 118s 20064 2 42 21 118s Coarse grid solver -- level 0 ------------------------------- 118s KSP Object: (mg_coarse_) 2 MPI processes 118s type: preonly 118s maximum iterations=10000, initial guess is zero 118s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 118s left preconditioning 118s using NONE norm type for convergence test 118s PC Object: (mg_coarse_) 2 MPI processes 118s type: bjacobi 118s number of blocks = 2 118s Local solver information for first block is in the following KSP and PC objects on rank 0: 118s Use -mg_coarse_ksp_view ::ascii_info_detail to display information for all blocks 118s KSP Object: (mg_coarse_sub_) 1 MPI process 118s type: preonly 118s maximum iterations=1, initial guess is zero 118s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 118s left preconditioning 118s using NONE norm type for convergence test 118s PC Object: (mg_coarse_sub_) 1 MPI process 118s type: lu 118s out-of-place factorization 118s tolerance for zero pivot 2.22045e-14 118s using diagonal shift on blocks to prevent zero pivot [INBLOCKS] 118s matrix ordering: nd 118s factor fill ratio given 5., needed 1.04902 118s Factored matrix follows: 118s Mat Object: (mg_coarse_sub_) 1 MPI process 118s type: seqaij 118s rows=156, cols=156, bs=6 118s package used to perform factorization: petsc 118s total: nonzeros=23112, allocated nonzeros=23112 118s using I-node routines: found 38 nodes, limit used is 5 118s linear system matrix = precond matrix: 118s Mat Object: (mg_coarse_sub_) 1 MPI process 118s type: seqaij 118s rows=156, cols=156, bs=6 118s total: nonzeros=22032, allocated nonzeros=22032 118s total number of mallocs used during MatSetValues calls=0 118s using I-node routines: found 49 nodes, limit used is 5 118s linear system matrix = precond matrix: 118s Mat Object: 2 MPI processes 118s type: mpiaij 118s rows=156, cols=156, bs=6 118s total: nonzeros=22032, allocated nonzeros=22032 118s total number of mallocs used during MatSetValues calls=0 118s using scalable MatPtAP() implementation 118s using I-node (on process 0) routines: found 49 nodes, limit used is 5 118s Down solver (pre-smoother) on level 1 ------------------------------- 118s KSP Object: (mg_levels_1_) 2 MPI processes 118s type: chebyshev 118s Chebyshev polynomial of first kind 118s eigenvalue targets used: min 0.296857, max 3.26543 118s eigenvalues provided (min 0.0108597, max 2.96857) with transform: [0. 0.1; 0. 1.1] 118s maximum iterations=2, nonzero initial guess 118s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 118s left preconditioning 118s using NONE norm type for convergence test 118s PC Object: (mg_levels_1_) 2 MPI processes 118s type: jacobi 118s type DIAGONAL 118s linear system matrix = precond matrix: 118s Mat Object: 2 MPI processes 118s type: mpiaij 118s rows=1776, cols=1776, bs=6 118s total: nonzeros=284256, allocated nonzeros=284256 118s total number of mallocs used during MatSetValues calls=0 118s using scalable MatPtAP() implementation 118s using I-node (on process 0) routines: found 272 nodes, limit used is 5 118s Up solver (post-smoother) same as down solver (pre-smoother) 118s Down solver (pre-smoother) on level 2 ------------------------------- 118s KSP Object: (mg_levels_2_) 2 MPI processes 118s type: chebyshev 118s Chebyshev polynomial of first kind 118s eigenvalue targets used: min 0.267716, max 2.94487 118s eigenvalues provided (min 0.0714234, max 2.67716) with transform: [0. 0.1; 0. 1.1] 118s maximum iterations=2, nonzero initial guess 118s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 118s left preconditioning 118s using NONE norm type for convergence test 118s PC Object: (mg_levels_2_) 2 MPI processes 118s type: jacobi 118s type DIAGONAL 118s linear system matrix = precond matrix: 118s Mat Object: 2 MPI processes 118s type: mpiaij 118s rows=20064, cols=20064, bs=3 118s total: nonzeros=827586, allocated nonzeros=827586 118s total number of mallocs used during MatSetValues calls=0 118s has attached near null space 118s using I-node (on process 0) routines: found 3342 nodes, limit used is 5 118s Up solver (post-smoother) same as down solver (pre-smoother) 118s linear system matrix = precond matrix: 118s Mat Object: 2 MPI processes 118s type: mpiaij 118s rows=20064, cols=20064, bs=3 118s total: nonzeros=827586, allocated nonzeros=827586 118s total number of mallocs used during MatSetValues calls=0 118s has attached near null space 118s using I-node (on process 0) routines: found 3342 nodes, limit used is 5 118s 118s [MPI_MAX] Summary of timings (s) | reps avg tot 118s ------------------------------------------------------------------------------------------------------- 118s Build BoxMesh (tetrahedra) | 1 0.744220 0.744220 118s Build dofmap data | 2 0.001266 0.002532 118s Compute connectivity 2-0 | 1 0.000222 0.000222 118s Compute dof reordering map | 2 0.000108 0.000216 118s Compute entities of dim = 2 | 1 0.013435 0.013435 118s Compute graph partition (SCOTCH) | 1 0.654160 0.654160 118s Compute local part of mesh dual graph (mixed) | 2 0.012103 0.024206 118s Compute local-to-local map | 1 0.000229 0.000229 118s Compute non-local part of mesh dual graph | 1 0.000882 0.000882 118s Compute-local-to-global links for global/local adjacency list | 1 0.000208 0.000208 118s Distribute fixed-degree adjacency list to destination ranks | 1 0.024088 0.024088 118s Distribute row-wise data (scalable) | 1 0.000473 0.000473 118s GPS: create_level_structure | 4 0.000765 0.002294 118s Gibbs-Poole-Stockmeyer ordering | 1 0.002828 0.002828 118s Init MPI | 1 0.009768 0.009768 118s Init PETSc | 1 0.000382 0.000382 118s Init dofmap from element dofmap | 2 0.000810 0.001620 118s Init logging | 1 0.000004 0.000004 118s PETSc Krylov solver | 1 0.198140 0.198140 118s SparsityPattern::finalize | 1 0.002319 0.002319 118s Topology: create | 1 0.038175 0.038175 118s Topology: determine shared index ownership | 1 0.031487 0.031487 118s Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.000501 0.000501 118s ZZZ Assemble matrix | 1 0.035331 0.035331 118s ZZZ Assemble vector | 1 0.001995 0.001995 118s ZZZ Create Mesh | 1 0.744301 0.744301 118s ZZZ Create RHS function | 1 0.002471 0.002471 118s ZZZ Create boundary conditions | 1 0.000315 0.000315 118s ZZZ Create facets and facet->cell connectivity | 1 0.013664 0.013664 118s ZZZ Create forms | 1 0.000031 0.000031 118s ZZZ Create near-nullspace | 1 0.002056 0.002056 118s ZZZ FunctionSpace | 1 0.001388 0.001388 118s ZZZ Solve | 1 0.199064 0.199064 118s *** Number of Krylov iterations: 20 118s *** Solution norm: 3.00268e-05 118s **************************************************************************************************************************************************************** 118s *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** 118s **************************************************************************************************************************************************************** 118s 118s ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ 118s 118s /usr/bin/dolfinx-scaling-test on a named autopkgtest with 2 processes, by ubuntu on Mon Feb 2 05:34:42 2026 118s Using PETSc Release Version 3.24.3, Jan 01, 2026 118s 118s Max Max/Min Avg Total 118s Time (sec): 1.005e+00 1.000 1.005e+00 118s Objects: 0.000e+00 0.000 0.000e+00 118s Flops: 2.183e+08 1.021 2.161e+08 4.322e+08 118s Flops/sec: 2.173e+08 1.021 2.151e+08 4.302e+08 118s MPI Msg Count: 4.135e+02 1.007 4.120e+02 8.240e+02 118s MPI Msg Len (bytes): 3.717e+06 1.001 9.017e+03 7.430e+06 118s MPI Reductions: 4.650e+02 1.000 118s 118s Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) 118s e.g., VecAXPY() for real vectors of length N --> 2N flops 118s and VecAXPY() for complex vectors of length N --> 8N flops 118s 118s Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- 118s Avg %Total Avg %Total Count %Total Avg %Total Count %Total 118s 0: Main Stage: 1.0046e+00 100.0% 4.3217e+08 100.0% 8.240e+02 100.0% 9.017e+03 100.0% 4.470e+02 96.1% 118s 118s ------------------------------------------------------------------------------------------------------------------------ 118s See the 'Profiling' chapter of the users' manual for details on interpreting output. 118s Phase summary info: 118s Count: number of times phase was executed 118s Time and Flop: Max - maximum over all processes 118s Ratio - ratio of maximum to minimum over all processes 118s Mess: number of messages sent 118s AvgLen: average message length (bytes) 118s Reduct: number of global reductions 118s Global: entire computation 118s Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). 118s %T - percent time in this phase %F - percent flop in this phase 118s %M - percent messages in this phase %L - percent message lengths in this phase 118s %R - percent reductions in this phase 118s Total Mflop/s: 1e-6 * (sum of flop over all processes)/(max time over all processes) 118s ------------------------------------------------------------------------------------------------------------------------ 118s Event Count Time (sec) Flop --- Global --- --- Stage ---- Total 118s Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s 118s ------------------------------------------------------------------------------------------------------------------------ 118s 118s --- Event Stage 0: Main Stage 118s 118s BuildTwoSided 109 1.0 3.9967e-03 9.9 0.00e+00 0.0 5.9e+01 4.0e+00 1.1e+02 0 0 7 0 23 0 0 7 0 24 0 118s BuildTwoSidedF 83 1.0 3.9794e-03 10.5 0.00e+00 0.0 3.2e+01 6.8e+04 8.3e+01 0 0 4 29 18 0 0 4 29 19 0 118s MatMult 208 1.0 2.2090e-02 1.0 1.23e+08 1.0 4.2e+02 6.8e+03 0.0e+00 2 55 50 38 0 2 55 50 38 0 10850 118s MatMultAdd 42 1.0 1.8594e-03 1.1 1.01e+07 1.0 6.3e+01 1.6e+03 0.0e+00 0 5 8 1 0 0 5 8 1 0 10835 118s MatMultTranspose 42 1.0 3.0275e-03 1.0 1.01e+07 1.0 6.3e+01 1.6e+03 0.0e+00 0 5 8 1 0 0 5 8 1 0 6659 118s MatSolve 21 0.0 2.0164e-04 0.0 9.67e+05 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 4798 118s MatLUFactorSym 1 1.0 4.2956e-04 111.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 118s MatLUFactorNum 1 1.0 5.2277e-04 442.3 2.20e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 4210 118s MatScale 6 1.0 2.3691e-04 1.0 5.81e+05 1.0 4.0e+00 1.9e+03 0.0e+00 0 0 0 0 0 0 0 0 0 0 4893 118s MatResidual 42 1.0 4.3456e-03 1.0 2.39e+07 1.1 8.4e+01 6.5e+03 0.0e+00 0 11 10 7 0 0 11 10 7 0 10746 118s MatAssemblyBegin 45 1.0 8.4476e-03 1.8 0.00e+00 0.0 3.2e+01 6.8e+04 2.3e+01 1 0 4 29 5 1 0 4 29 5 0 118s MatAssemblyEnd 45 1.0 8.2152e-03 1.0 4.08e+04 1.0 5.8e+01 5.9e+02 9.0e+01 1 0 7 0 19 1 0 7 0 20 10 118s MatGetRowIJ 1 0.0 1.4172e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 118s MatCreateSubMat 1 1.0 1.1335e-03 1.0 0.00e+00 0.0 2.0e+00 2.8e+02 1.5e+01 0 0 0 0 3 0 0 0 0 3 0 118s MatGetOrdering 1 0.0 3.2298e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 118s MatCoarsen 2 1.0 3.5599e-04 1.0 0.00e+00 0.0 3.7e+01 8.7e+02 3.6e+01 0 0 4 0 8 0 0 4 0 8 0 118s MatZeroEntries 2 1.0 2.6320e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 118s MatView 6 1.5 5.3950e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 118s MatAXPY 4 1.0 2.8542e-03 1.0 1.16e+05 1.0 8.0e+00 4.8e+02 1.4e+01 0 0 1 0 3 0 0 1 0 3 81 118s MatTranspose 9 1.0 2.0711e-03 1.1 0.00e+00 0.0 3.5e+01 2.2e+03 2.7e+01 0 0 4 1 6 0 0 4 1 6 0 118s MatMatMultSym 6 1.0 1.8050e-02 1.0 0.00e+00 0.0 2.0e+01 1.2e+04 2.0e+01 2 0 2 3 4 2 0 2 3 4 0 118s MatMatMultNum 2 1.0 4.1769e-03 1.0 6.84e+06 1.1 4.0e+00 3.9e+04 2.0e+00 0 3 0 2 0 0 3 0 2 0 3194 118s MatPtAPSymbolic 2 1.0 7.5124e-02 1.0 0.00e+00 0.0 2.1e+01 6.4e+04 1.4e+01 7 0 3 18 3 7 0 3 18 3 0 118s MatPtAPNumeric 2 1.0 5.2879e-02 1.0 5.54e+07 1.0 1.0e+01 1.1e+05 1.2e+01 5 25 1 15 3 5 25 1 15 3 2063 118s MatTrnMatMultSym 1 1.0 9.6102e-03 1.0 0.00e+00 0.0 1.4e+01 3.6e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 118s MatGetLocalMat 7 1.0 8.5955e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 118s MatGetBrAoCol 6 1.0 5.8961e-04 1.0 0.00e+00 0.0 2.8e+01 5.2e+04 0.0e+00 0 0 3 20 0 0 0 3 20 0 0 118s MatCreateGraph 2 1.0 5.5499e-03 1.0 1.51e+05 1.0 4.8e+01 1.9e+03 5.0e+01 1 0 6 1 11 1 0 6 1 11 54 118s VecMDot 20 1.0 5.1711e-04 1.0 1.21e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 4645 118s VecTDot 42 1.0 3.9919e-04 1.0 8.43e+05 1.0 0.0e+00 0.0e+00 4.2e+01 0 0 0 0 9 0 0 0 0 9 4222 118s VecNorm 43 1.0 3.9220e-04 1.2 6.64e+05 1.0 0.0e+00 0.0e+00 4.3e+01 0 0 0 0 9 0 0 0 0 10 3373 118s VecScale 22 1.0 2.2462e-05 1.0 1.21e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 10695 118s VecCopy 130 1.0 1.3649e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 118s VecSet 148 1.0 4.9667e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 118s VecAXPY 42 1.0 9.5056e-05 1.0 8.25e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 17346 118s VecAYPX 271 1.0 5.6253e-04 1.1 2.23e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 7878 118s VecAXPBYCZ 84 1.0 2.6585e-04 1.0 2.31e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 17252 118s VecMAXPY 22 1.0 1.4153e-04 1.0 1.43e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 20060 118s VecAssemblyBegin 61 1.0 9.8570e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+01 0 0 0 0 13 0 0 0 0 13 0 118s VecAssemblyEnd 61 1.0 1.6652e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 118s VecPointwiseMult 190 1.0 4.4960e-04 1.0 1.04e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 4615 118s VecReciprocal 8 1.0 5.2218e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 118s VecScatterBegin 356 1.0 3.8946e-04 1.0 0.00e+00 0.0 6.3e+02 5.3e+03 0.0e+00 0 0 77 45 0 0 0 77 45 0 0 118s VecScatterEnd 356 1.0 2.1889e-03 1.5 6.55e+03 1.2 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 6 118s VecNormalize 22 1.0 2.1587e-04 1.4 3.63e+05 1.0 0.0e+00 0.0e+00 2.2e+01 0 0 0 0 5 0 0 0 0 5 3339 118s SFSetGraph 26 1.0 4.0061e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 118s SFSetUp 26 1.0 1.9415e-04 1.0 0.00e+00 0.0 8.6e+01 5.7e+02 2.6e+01 0 0 10 1 6 0 0 10 1 6 0 118s SFBcastBegin 8 1.0 9.6340e-06 1.0 0.00e+00 0.0 1.6e+01 1.6e+03 0.0e+00 0 0 2 0 0 0 0 2 0 0 0 118s SFBcastEnd 8 1.0 8.6540e-06 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 118s SFReduceBegin 3 1.0 1.9389e-05 1.0 0.00e+00 0.0 5.0e+00 7.7e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 118s SFReduceEnd 3 1.0 4.7270e-06 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 118s SFPack 367 1.0 1.5975e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 118s SFUnpack 367 1.0 3.3876e-05 1.2 6.55e+03 1.2 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 361 118s KSPSetUp 1 1.0 3.2449e-05 2.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 118s KSPSolve 1 1.0 2.8461e-02 1.0 1.39e+08 1.0 5.0e+02 5.5e+03 8.4e+01 3 64 61 37 18 3 64 61 37 19 9702 118s KSPGMRESOrthog 20 1.0 6.4790e-04 1.0 2.42e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 7416 118s PCSetUp_GAMG+ 1 1.0 1.6769e-01 1.0 7.73e+07 1.0 3.0e+02 1.4e+04 3.1e+02 17 35 37 56 66 17 35 37 56 69 907 118s PCGAMGCreateG 2 1.0 5.5514e-03 1.0 1.51e+05 1.0 4.8e+01 1.9e+03 5.0e+01 1 0 6 1 11 1 0 6 1 11 54 118s GAMG Coarsen 4 1.0 1.0599e-02 1.0 0.00e+00 0.0 6.1e+01 9.7e+03 5.3e+01 1 0 7 8 11 1 0 7 8 12 0 118s GAMG MIS/Agg 2 1.0 1.0002e-02 1.0 0.00e+00 0.0 5.1e+01 1.1e+04 4.9e+01 1 0 6 7 11 1 0 6 7 11 0 118s PCGAMGProl 2 1.0 3.4013e-03 1.0 0.00e+00 0.0 8.7e+01 3.6e+03 7.6e+01 0 0 11 4 16 0 0 11 4 17 0 118s GAMG Prol-col 2 1.0 1.3548e-03 1.0 0.00e+00 0.0 7.5e+01 3.0e+03 5.6e+01 0 0 9 3 12 0 0 9 3 13 0 118s GAMG Prol-lift 2 1.0 1.9464e-03 1.0 0.00e+00 0.0 1.2e+01 7.6e+03 1.2e+01 0 0 1 1 3 0 0 1 1 3 0 118s PCGAMGOptProl 2 1.0 1.8590e-02 1.0 2.18e+07 1.0 6.4e+01 1.0e+04 6.6e+01 2 10 8 9 14 2 10 8 9 15 2297 118s GAMG smooth 2 1.0 1.4296e-02 1.0 7.39e+06 1.0 2.4e+01 1.7e+04 2.4e+01 1 3 3 5 5 1 3 3 5 5 1010 118s PCGAMGCreateL 2 1.0 1.2916e-01 1.0 5.54e+07 1.0 4.2e+01 6.0e+04 6.0e+01 13 25 5 34 13 13 25 5 34 13 844 118s GAMG PtAP 2 1.0 1.2793e-01 1.0 5.54e+07 1.0 3.1e+01 8.1e+04 2.6e+01 13 25 4 34 6 13 25 4 34 6 853 118s GAMG Reduce 1 1.0 4.0486e-02 1.0 1.76e+07 1.2 2.2e+01 3.5e+04 4.7e+01 4 8 3 10 10 4 8 3 10 11 811 118s PCGAMG Squ l00 1 1.0 9.6110e-03 1.0 0.00e+00 0.0 1.4e+01 3.6e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 118s PCGAMG Gal l00 1 1.0 8.8766e-02 1.0 3.84e+07 1.0 2.0e+01 8.8e+04 1.3e+01 9 18 2 24 3 9 18 2 24 3 859 118s PCGAMG Opt l00 1 1.0 9.7915e-03 1.0 4.97e+06 1.0 1.2e+01 2.6e+04 1.1e+01 1 2 1 4 2 1 2 1 4 2 1014 118s PCGAMG Gal l01 1 1.0 3.9263e-02 1.0 1.76e+07 1.2 1.1e+01 6.8e+04 1.3e+01 4 8 1 10 3 4 8 1 10 3 836 118s PCGAMG Opt l01 1 1.0 3.1144e-03 1.0 1.87e+06 1.2 1.2e+01 7.5e+03 1.1e+01 0 1 1 1 2 0 1 1 1 2 1095 118s PCSetUp 1 1.0 1.6769e-01 1.0 7.73e+07 1.0 3.0e+02 1.4e+04 3.1e+02 17 35 37 56 66 17 35 37 56 69 907 118s PCSetUpOnBlocks 21 1.0 1.0314e-03 18.8 2.20e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2134 118s PCApply 21 1.0 2.5048e-02 1.0 1.20e+08 1.0 4.6e+02 5.1e+03 2.1e+01 2 55 56 32 5 2 55 56 32 5 9522 118s PCApplyOnBlocks 21 1.0 2.2125e-04 12.1 9.67e+05 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 4373 118s ------------------------------------------------------------------------------------------------------------------------ 118s 118s Object Type Creations Destructions. Reports information only for process 0. 118s 118s --- Event Stage 0: Main Stage 118s 118s Container 11 11 118s Matrix 82 82 118s Matrix Coarsen 2 2 118s Matrix Null Space 1 1 118s Index Set 60 60 118s IS L to G Mapping 5 5 118s Vector 179 179 118s Star Forest Graph 34 34 118s Krylov Solver 7 7 118s Preconditioner 7 7 118s Viewer 2 2 118s PetscRandom 2 2 118s Distributed Mesh 4 4 118s Discrete System 4 4 118s Weak Form 4 4 118s ======================================================================================================================== 118s Average time to get PetscTime(): 3.1e-08 118s Average time for MPI_Barrier(): 2.464e-07 118s Average time for zero size MPI_Send(): 5.56e-07 118s #PETSc Option Table entries: 118s --ndofs 10000 # (source: command line) 118s --problem_type elasticity # (source: command line) 118s --scaling_type weak # (source: command line) 118s -ksp_rtol 1.0e-8 # (source: command line) 118s -ksp_type cg # (source: command line) 118s -ksp_view # (source: command line) 118s -log_view # (source: command line) 118s -matptap_via scalable # (source: command line) 118s -mg_levels_esteig_ksp_type cg # (source: command line) 118s -mg_levels_ksp_type chebyshev # (source: command line) 118s -mg_levels_pc_type jacobi # (source: command line) 118s -options_left # (source: command line) 118s -pc_gamg_coarse_eq_limit 1000 # (source: command line) 118s -pc_type gamg # (source: command line) 118s #End of PETSc Option Table entries 118s Compiled without FORTRAN kernels 118s Compiled with full precision matrices (default) 118s sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 118s Configure options: --build=x86_64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --with-library-name-suffix=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi " --CXX_LINKER_FLAGS="-Wl,--no-as-needed -Wl,-z,defs" --CC_LINKER_FLAGS=-Wl,-z,defs --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real --PETSC_ARCH=x86_64-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" CXXFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" FCFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=3" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,--package-metadata=%7B%22type%22:%22deb%22%2C%22os%22:%22ubuntu%22%2C%22name%22:%22petsc%22%2C%22version%22:%223.24.3+dfsg1-1ubuntu1%22%2C%22architecture%22:%22amd64%22%7D -flto=auto -ffat-lto-objects -Wl,-z,relro -fPIC" MAKEFLAGS= 118s ----------------------------------------- 118s Libraries compiled on 2026-01-26 06:54:57 on reproducible 118s Machine characteristics: Linux-6.8.0-90-generic-x86_64-with-glibc2.42 118s Using PETSc directory: /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real 118s Using PETSc arch: 118s ----------------------------------------- 118s 118s Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -Wdate-time -D_FORTIFY_SOURCE=3 118s Using Fortran compiler: mpif90 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=3 118s ----------------------------------------- 118s 118s Using include paths: -I/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu-dist -I/usr/include/superlu -I/usr/include/scotch -I/usr/include/hdf5/openmpi 118s ----------------------------------------- 118s 118s Using C linker: mpicc 118s Using Fortran linker: mpif90 118s Using libraries: -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/gcc/x86_64-linux-gnu/15 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -lfftw3 -lfftw3_mpi -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu_dist -lsuperlu -llapack -lblas -lptesmumps -lptscotch -lscotch -lptscotcherr -lhdf5 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lm -lOpenCL -lyaml -lX11 -lstdc++ -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ 118s ----------------------------------------- 118s 118s #PETSc Option Table entries: 118s --ndofs 10000 # (source: command line) 118s --problem_type elasticity # (source: command line) 118s --scaling_type weak # (source: command line) 118s -ksp_rtol 1.0e-8 # (source: command line) 118s -ksp_type cg # (source: command line) 118s -ksp_view # (source: command line) 118s -log_view # (source: command line) 118s -matptap_via scalable # (source: command line) 118s -mg_levels_esteig_ksp_type cg # (source: command line) 118s -mg_levels_ksp_type chebyshev # (source: command line) 118s -mg_levels_pc_type jacobi # (source: command line) 118s -options_left # (source: command line) 118s -pc_gamg_coarse_eq_limit 1000 # (source: command line) 118s -pc_type gamg # (source: command line) 118s #End of PETSc Option Table entries 118s WARNING! There are options you set that were not used! 118s WARNING! could be spelling mistake, etc! 118s There are 4 unused database options. They are: 118s Option left: name:--ndofs value: 10000 source: command line 118s Option left: name:--problem_type value: elasticity source: command line 118s Option left: name:--scaling_type value: weak source: command line 118s Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line 118s ==== elasticity strong scaling (2 processes with ndofs=20000) ==== 118s [2026-02-02 05:34:42.513] [RANK: 0] [info] Using partitioner with cell data (1 cell types) 118s [2026-02-02 05:34:42.513] [RANK: 0] [info] Compute partition of cells across ranks 118s [2026-02-02 05:34:42.513] [RANK: 0] [info] Building mesh dual graph 118s [2026-02-02 05:34:42.513] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 118s [2026-02-02 05:34:42.521] [RANK: 0] [info] Build nonlocal part of mesh dual graph 118s [2026-02-02 05:34:42.521] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 118s [2026-02-02 05:34:42.521] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 118s [2026-02-02 05:34:42.521] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 1, 1 118s [2026-02-02 05:34:42.522] [RANK: 0] [info] Graph edges (local: 65536, non-local: 578) 118s [2026-02-02 05:34:42.522] [RANK: 0] [info] Compute graph partition using PT-SCOTCH 119s [2026-02-02 05:34:43.174] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 119s [2026-02-02 05:34:43.178] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 119s [2026-02-02 05:34:43.199] [RANK: 0] [info] Extract basic topology: 66788->66788 119s [2026-02-02 05:34:43.199] [RANK: 0] [info] Build local dual graphs, re-order cells, and compute process boundary vertices. 119s [2026-02-02 05:34:43.199] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 119s [2026-02-02 05:34:43.215] [RANK: 0] [info] GPS pseudo-diameter:(106) 103-14589 119s [2026-02-02 05:34:43.216] [RANK: 0] [info] Create topology (generalised) 119s [2026-02-02 05:34:43.218] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 119s [2026-02-02 05:34:43.226] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 119s [2026-02-02 05:34:43.250] [RANK: 0] [info] Compute ghost indices 119s [2026-02-02 05:34:43.250] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 119s [2026-02-02 05:34:43.250] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 119s [2026-02-02 05:34:43.251] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 119s [2026-02-02 05:34:43.251] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 119s [2026-02-02 05:34:43.253] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 119s [2026-02-02 05:34:43.253] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 119s [2026-02-02 05:34:43.253] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 119s [2026-02-02 05:34:43.253] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 119s [2026-02-02 05:34:43.254] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 119s [2026-02-02 05:34:43.254] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 119s [2026-02-02 05:34:43.254] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 119s [2026-02-02 05:34:43.254] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 119s [2026-02-02 05:34:43.254] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 119s [2026-02-02 05:34:43.254] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 1, 0.5 119s [2026-02-02 05:34:43.255] [RANK: 0] [info] Create Geometry (multiple) 119s [2026-02-02 05:34:43.255] [RANK: 0] [info] Got 1 dof layouts 119s [2026-02-02 05:34:43.255] [RANK: 0] [info] Checking required entities per dimension 119s [2026-02-02 05:34:43.255] [RANK: 0] [info] Cell type: 0 dofmap: 16697x4 119s [2026-02-02 05:34:43.255] [RANK: 0] [info] Global index computation 119s [2026-02-02 05:34:43.255] [RANK: 0] [info] Got 1 index_maps 119s [2026-02-02 05:34:43.256] [RANK: 0] [info] Get global indices 119s [2026-02-02 05:34:43.256] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 119s [2026-02-02 05:34:43.256] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 119s [2026-02-02 05:34:43.256] [RANK: 0] [info] Calling compute_local_to_global 119s [2026-02-02 05:34:43.256] [RANK: 0] [info] xdofs.size = 66788 119s [2026-02-02 05:34:43.256] [RANK: 0] [info] dofmap sizes = 66788 119s [2026-02-02 05:34:43.256] [RANK: 0] [info] all_dofmaps.size = 66788 119s [2026-02-02 05:34:43.256] [RANK: 0] [info] nodes.size = 3443 119s [2026-02-02 05:34:43.256] [RANK: 0] [info] Creating geometry with 1 dofmaps 119s UnitCube (18x15x21) to be refined 0 times 119s [2026-02-02 05:34:43.257] [RANK: 0] [info] Computing mesh entities of dimension 2 119s [2026-02-02 05:34:43.262] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 119s [2026-02-02 05:34:43.262] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 119s [2026-02-02 05:34:43.269] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 119s [2026-02-02 05:34:43.269] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 119s [2026-02-02 05:34:43.270] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 119s [2026-02-02 05:34:43.270] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. 119s [2026-02-02 05:34:43.270] [RANK: 0] [info] Checking required entities per dimension 119s [2026-02-02 05:34:43.270] [RANK: 0] [info] Cell type: 0 dofmap: 16697x4 119s [2026-02-02 05:34:43.271] [RANK: 0] [info] Global index computation 119s [2026-02-02 05:34:43.271] [RANK: 0] [info] Got 1 index_maps 119s [2026-02-02 05:34:43.271] [RANK: 0] [info] Get global indices 119s [2026-02-02 05:34:43.271] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 119s [2026-02-02 05:34:43.271] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 119s [2026-02-02 05:34:43.272] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) 119s [2026-02-02 05:34:43.277] [RANK: 0] [info] Column ghost size increased from 156 to 411 119s ---------------------------------------------------------------- 119s Test problem summary 119s dolfinx version: 0.10.0 119s dolfinx hash: ubuntu 119s ufl hash: 58f3dc30e5e56245b795ae796fe6a103649e8345 119s petsc version: PETSc Release Version 3.24.3, Jan 01, 2026 119s Problem type: elasticity 119s Scaling type: strong 119s Num processes: 2 119s Num cells: 34020 (34 thousand) 119s Total degrees of freedom: 20064 (20.1 thousand) 119s Average degrees of freedom per process: 10032 119s ---------------------------------------------------------------- 119s [2026-02-02 05:34:43.319] [RANK: 0] [info] PETSc Krylov solver starting to solve system. 119s KSP Object: 2 MPI processes 119s type: cg 119s maximum iterations=10000, initial guess is zero 119s tolerances: relative=1e-08, absolute=1e-50, divergence=10000. 119s left preconditioning 119s using PRECONDITIONED norm type for convergence test 119s PC Object: 2 MPI processes 119s type: gamg 119s type is MULTIPLICATIVE, levels=3 cycles=v 119s Cycles per PCApply=1 119s Using externally compute Galerkin coarse grid matrices 119s GAMG specific options 119s Threshold for dropping small values in graph on each level = -1. -1. -1. 119s Threshold scaling factor for each level not specified = 1. 119s AGG specific options 119s Number of levels of aggressive coarsening 1 119s Square graph aggressive coarsening 119s MatCoarsen Object: 2 MPI processes 119s type: misk 119s Number smoothing steps to construct prolongation 1 119s Complexity: grid = 1.0942 operator = 1.35927 119s Per-level complexity: op = operator, int = interpolation 119s #equations | #active PEs | avg nnz/row op | avg nnz/row int 119s 168 1 144 0 119s 1722 2 159 35 119s 20064 2 42 21 119s Coarse grid solver -- level 0 ------------------------------- 119s KSP Object: (mg_coarse_) 2 MPI processes 119s type: preonly 119s maximum iterations=10000, initial guess is zero 119s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 119s left preconditioning 119s using NONE norm type for convergence test 119s PC Object: (mg_coarse_) 2 MPI processes 119s type: bjacobi 119s number of blocks = 2 119s Local solver information for first block is in the following KSP and PC objects on rank 0: 119s Use -mg_coarse_ksp_view ::ascii_info_detail to display information for all blocks 119s KSP Object: (mg_coarse_sub_) 1 MPI process 119s type: preonly 119s maximum iterations=1, initial guess is zero 119s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 119s left preconditioning 119s using NONE norm type for convergence test 119s PC Object: (mg_coarse_sub_) 1 MPI process 119s type: lu 119s out-of-place factorization 119s tolerance for zero pivot 2.22045e-14 119s using diagonal shift on blocks to prevent zero pivot [INBLOCKS] 119s matrix ordering: nd 119s factor fill ratio given 5., needed 1.07186 119s Factored matrix follows: 119s Mat Object: (mg_coarse_sub_) 1 MPI process 119s type: seqaij 119s rows=168, cols=168, bs=6 119s package used to perform factorization: petsc 119s total: nonzeros=25776, allocated nonzeros=25776 119s using I-node routines: found 44 nodes, limit used is 5 119s linear system matrix = precond matrix: 119s Mat Object: (mg_coarse_sub_) 1 MPI process 119s type: seqaij 119s rows=168, cols=168, bs=6 119s total: nonzeros=24048, allocated nonzeros=24048 119s total number of mallocs used during MatSetValues calls=0 119s using I-node routines: found 50 nodes, limit used is 5 119s linear system matrix = precond matrix: 119s Mat Object: 2 MPI processes 119s type: mpiaij 119s rows=168, cols=168, bs=6 119s total: nonzeros=24048, allocated nonzeros=24048 119s total number of mallocs used during MatSetValues calls=0 119s using scalable MatPtAP() implementation 119s using I-node (on process 0) routines: found 50 nodes, limit used is 5 119s Down solver (pre-smoother) on level 1 ------------------------------- 119s KSP Object: (mg_levels_1_) 2 MPI processes 119s type: chebyshev 119s Chebyshev polynomial of first kind 119s eigenvalue targets used: min 0.253361, max 2.78697 119s eigenvalues provided (min 0.0632092, max 2.53361) with transform: [0. 0.1; 0. 1.1] 119s maximum iterations=2, nonzero initial guess 119s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 119s left preconditioning 119s using NONE norm type for convergence test 119s PC Object: (mg_levels_1_) 2 MPI processes 119s type: jacobi 119s type DIAGONAL 119s linear system matrix = precond matrix: 119s Mat Object: 2 MPI processes 119s type: mpiaij 119s rows=1722, cols=1722, bs=6 119s total: nonzeros=273276, allocated nonzeros=273276 119s total number of mallocs used during MatSetValues calls=0 119s using scalable MatPtAP() implementation 119s using I-node (on process 0) routines: found 268 nodes, limit used is 5 119s Up solver (post-smoother) same as down solver (pre-smoother) 119s Down solver (pre-smoother) on level 2 ------------------------------- 119s KSP Object: (mg_levels_2_) 2 MPI processes 119s type: chebyshev 119s Chebyshev polynomial of first kind 119s eigenvalue targets used: min 0.269394, max 2.96334 119s eigenvalues provided (min 0.0708801, max 2.69394) with transform: [0. 0.1; 0. 1.1] 119s maximum iterations=2, nonzero initial guess 119s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 119s left preconditioning 119s using NONE norm type for convergence test 119s PC Object: (mg_levels_2_) 2 MPI processes 119s type: jacobi 119s type DIAGONAL 119s linear system matrix = precond matrix: 119s Mat Object: 2 MPI processes 119s type: mpiaij 119s rows=20064, cols=20064, bs=3 119s total: nonzeros=827586, allocated nonzeros=827586 119s total number of mallocs used during MatSetValues calls=0 119s has attached near null space 119s using I-node (on process 0) routines: found 3287 nodes, limit used is 5 119s Up solver (post-smoother) same as down solver (pre-smoother) 119s linear system matrix = precond matrix: 119s Mat Object: 2 MPI processes 119s type: mpiaij 119s rows=20064, cols=20064, bs=3 119s total: nonzeros=827586, allocated nonzeros=827586 119s total number of mallocs used during MatSetValues calls=0 119s has attached near null space 119s using I-node (on process 0) routines: found 3287 nodes, limit used is 5 119s 119s [MPI_MAX] Summary of timings (s) | reps avg tot 119s ------------------------------------------------------------------------------------------------------- 119s Build BoxMesh (tetrahedra) | 1 0.744354 0.744354 119s Build dofmap data | 2 0.001247 0.002494 119s Compute connectivity 2-0 | 1 0.000210 0.000210 119s Compute dof reordering map | 2 0.000105 0.000210 119s Compute entities of dim = 2 | 1 0.013247 0.013247 119s Compute graph partition (SCOTCH) | 1 0.652167 0.652167 119s Compute local part of mesh dual graph (mixed) | 2 0.012163 0.024327 119s Compute local-to-local map | 1 0.000224 0.000224 119s Compute non-local part of mesh dual graph | 1 0.000895 0.000895 119s Compute-local-to-global links for global/local adjacency list | 1 0.000225 0.000225 119s Distribute fixed-degree adjacency list to destination ranks | 1 0.024928 0.024928 119s Distribute row-wise data (scalable) | 1 0.000433 0.000433 119s GPS: create_level_structure | 3 0.000102 0.000265 119s Gibbs-Poole-Stockmeyer ordering | 1 0.000855 0.000855 119s Init MPI | 1 0.011189 0.011189 119s Init PETSc | 1 0.000328 0.000328 119s Init dofmap from element dofmap | 2 0.000796 0.001592 119s Init logging | 1 0.000003 0.000003 119s PETSc Krylov solver | 1 0.192791 0.192791 119s SparsityPattern::finalize | 1 0.002313 0.002313 119s Topology: create | 1 0.040077 0.040077 119s Topology: determine shared index ownership | 1 0.033464 0.033464 119s Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.002629 0.002629 119s ZZZ Assemble matrix | 1 0.036479 0.036479 119s ZZZ Assemble vector | 1 0.002071 0.002071 119s ZZZ Create Mesh | 1 0.744411 0.744411 119s ZZZ Create RHS function | 1 0.002338 0.002338 119s ZZZ Create boundary conditions | 1 0.000297 0.000297 119s ZZZ Create facets and facet->cell connectivity | 1 0.013466 0.013466 119s ZZZ Create forms | 1 0.000034 0.000034 119s ZZZ Create near-nullspace | 1 0.002029 0.002029 119s ZZZ FunctionSpace | 1 0.001411 0.001411 119s ZZZ Solve | 1 0.193852 0.193852 119s *** Number of Krylov iterations: 19 119s *** Solution norm: 3.00268e-05 119s **************************************************************************************************************************************************************** 119s *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** 119s **************************************************************************************************************************************************************** 119s 119s ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ 119s 119s /usr/bin/dolfinx-scaling-test on a named autopkgtest with 2 processes, by ubuntu on Mon Feb 2 05:34:43 2026 119s Using PETSc Release Version 3.24.3, Jan 01, 2026 119s 119s Max Max/Min Avg Total 119s Time (sec): 1.000e+00 1.000 1.000e+00 119s Objects: 0.000e+00 0.000 0.000e+00 119s Flops: 2.093e+08 1.023 2.069e+08 4.138e+08 119s Flops/sec: 2.092e+08 1.023 2.068e+08 4.136e+08 119s MPI Msg Count: 4.015e+02 1.008 4.000e+02 8.000e+02 119s MPI Msg Len (bytes): 3.629e+06 1.001 9.069e+03 7.255e+06 119s MPI Reductions: 4.610e+02 1.000 119s 119s Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) 119s e.g., VecAXPY() for real vectors of length N --> 2N flops 119s and VecAXPY() for complex vectors of length N --> 8N flops 119s 119s Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- 119s Avg %Total Avg %Total Count %Total Avg %Total Count %Total 119s 0: Main Stage: 1.0004e+00 100.0% 4.1380e+08 100.0% 8.000e+02 100.0% 9.069e+03 100.0% 4.430e+02 96.1% 119s 119s ------------------------------------------------------------------------------------------------------------------------ 119s See the 'Profiling' chapter of the users' manual for details on interpreting output. 119s Phase summary info: 119s Count: number of times phase was executed 119s Time and Flop: Max - maximum over all processes 119s Ratio - ratio of maximum to minimum over all processes 119s Mess: number of messages sent 119s AvgLen: average message length (bytes) 119s Reduct: number of global reductions 119s Global: entire computation 119s Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). 119s %T - percent time in this phase %F - percent flop in this phase 119s %M - percent messages in this phase %L - percent message lengths in this phase 119s %R - percent reductions in this phase 119s Total Mflop/s: 1e-6 * (sum of flop over all processes)/(max time over all processes) 119s ------------------------------------------------------------------------------------------------------------------------ 119s Event Count Time (sec) Flop --- Global --- --- Stage ---- Total 119s Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s 119s ------------------------------------------------------------------------------------------------------------------------ 119s 119s --- Event Stage 0: Main Stage 119s 119s BuildTwoSided 109 1.0 4.6289e-03 15.6 0.00e+00 0.0 5.9e+01 4.0e+00 1.1e+02 0 0 7 0 24 0 0 7 0 25 0 119s BuildTwoSidedF 83 1.0 4.6369e-03 16.8 0.00e+00 0.0 3.2e+01 6.7e+04 8.3e+01 0 0 4 30 18 0 0 4 30 19 0 119s MatMult 199 1.0 2.0687e-02 1.0 1.17e+08 1.1 4.0e+02 6.8e+03 0.0e+00 2 55 50 37 0 2 55 50 37 0 10986 119s MatMultAdd 40 1.0 1.7562e-03 1.1 9.51e+06 1.0 6.0e+01 1.6e+03 0.0e+00 0 5 8 1 0 0 5 8 1 0 10743 119s MatMultTranspose 40 1.0 2.7823e-03 1.0 9.52e+06 1.0 6.0e+01 1.6e+03 0.0e+00 0 5 8 1 0 0 5 8 1 0 6786 119s MatSolve 20 0.0 2.0891e-04 0.0 1.03e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 4919 119s MatLUFactorSym 1 1.0 6.7320e-04 192.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 119s MatLUFactorNum 1 1.0 5.7771e-04 678.9 2.51e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 4346 119s MatScale 6 1.0 2.3174e-04 1.0 5.77e+05 1.0 4.0e+00 1.9e+03 0.0e+00 0 0 0 0 0 0 0 0 0 0 4930 119s MatResidual 40 1.0 4.0947e-03 1.0 2.26e+07 1.1 8.0e+01 6.4e+03 0.0e+00 0 11 10 7 0 0 11 10 7 0 10754 119s MatAssemblyBegin 45 1.0 9.0332e-03 1.9 0.00e+00 0.0 3.2e+01 6.7e+04 2.3e+01 1 0 4 30 5 1 0 4 30 5 0 119s MatAssemblyEnd 45 1.0 8.1197e-03 1.0 4.00e+04 1.0 5.8e+01 5.9e+02 9.0e+01 1 0 7 0 20 1 0 7 0 20 10 119s MatGetRowIJ 1 0.0 1.1838e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 119s MatCreateSubMat 1 1.0 1.0396e-03 1.0 0.00e+00 0.0 2.0e+00 2.9e+02 1.5e+01 0 0 0 0 3 0 0 0 0 3 0 119s MatGetOrdering 1 0.0 3.2468e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 119s MatCoarsen 2 1.0 3.6822e-04 1.0 0.00e+00 0.0 3.7e+01 8.7e+02 3.6e+01 0 0 5 0 8 0 0 5 0 8 0 119s MatZeroEntries 2 1.0 4.2604e-05 2.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 119s MatView 6 1.5 5.5026e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 119s MatAXPY 4 1.0 2.8350e-03 1.0 1.18e+05 1.0 8.0e+00 4.8e+02 1.4e+01 0 0 1 0 3 0 0 1 0 3 81 119s MatTranspose 9 1.0 2.1337e-03 1.1 0.00e+00 0.0 3.5e+01 2.3e+03 2.7e+01 0 0 4 1 6 0 0 4 1 6 0 119s MatMatMultSym 6 1.0 1.7622e-02 1.0 0.00e+00 0.0 2.0e+01 1.2e+04 2.0e+01 2 0 2 3 4 2 0 2 3 5 0 119s MatMatMultNum 2 1.0 4.1736e-03 1.0 6.79e+06 1.1 4.0e+00 3.9e+04 2.0e+00 0 3 0 2 0 0 3 0 2 0 3165 119s MatPtAPSymbolic 2 1.0 7.2914e-02 1.0 0.00e+00 0.0 2.1e+01 6.5e+04 1.4e+01 7 0 3 19 3 7 0 3 19 3 0 119s MatPtAPNumeric 2 1.0 5.1302e-02 1.0 5.36e+07 1.0 1.0e+01 1.1e+05 1.2e+01 5 26 1 16 3 5 26 1 16 3 2070 119s MatTrnMatMultSym 1 1.0 9.7055e-03 1.0 0.00e+00 0.0 1.4e+01 3.6e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 119s MatGetLocalMat 7 1.0 8.7911e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 119s MatGetBrAoCol 6 1.0 5.6586e-04 1.0 0.00e+00 0.0 2.8e+01 5.3e+04 0.0e+00 0 0 4 20 0 0 0 4 20 0 0 119s MatCreateGraph 2 1.0 5.5738e-03 1.0 1.52e+05 1.0 4.8e+01 1.9e+03 5.0e+01 1 0 6 1 11 1 0 6 1 11 54 119s VecMDot 20 1.0 5.1827e-04 1.0 1.22e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 5 4624 119s VecTDot 40 1.0 3.6073e-04 1.0 8.16e+05 1.0 0.0e+00 0.0e+00 4.0e+01 0 0 0 0 9 0 0 0 0 9 4449 119s VecNorm 42 1.0 3.5046e-04 1.2 6.53e+05 1.0 0.0e+00 0.0e+00 4.2e+01 0 0 0 0 9 0 0 0 0 9 3657 119s VecScale 22 1.0 2.2967e-05 1.1 1.22e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 10434 119s VecCopy 124 1.0 1.3392e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 119s VecSet 141 1.0 4.0951e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 119s VecAXPY 40 1.0 1.1352e-04 1.0 7.98e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 13817 119s VecAYPX 258 1.0 5.0986e-04 1.0 2.15e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 8253 119s VecAXPBYCZ 80 1.0 2.6360e-04 1.0 2.22e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 16529 119s VecMAXPY 22 1.0 1.5379e-04 1.0 1.45e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 18416 119s VecAssemblyBegin 61 1.0 1.2796e-04 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+01 0 0 0 0 13 0 0 0 0 14 0 119s VecAssemblyEnd 61 1.0 1.6615e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 119s VecPointwiseMult 182 1.0 3.8954e-04 1.0 1.01e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 5089 119s VecReciprocal 8 1.0 5.2641e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 119s VecScatterBegin 343 1.0 5.9208e-04 1.0 0.00e+00 0.0 6.1e+02 5.2e+03 0.0e+00 0 0 76 44 0 0 0 76 44 0 0 119s VecScatterEnd 343 1.0 2.3680e-03 1.9 6.12e+03 1.1 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 5 119s VecNormalize 22 1.0 1.8501e-04 1.2 3.67e+05 1.0 0.0e+00 0.0e+00 2.2e+01 0 0 0 0 5 0 0 0 0 5 3886 119s SFSetGraph 26 1.0 4.0262e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 119s SFSetUp 26 1.0 1.7936e-04 1.1 0.00e+00 0.0 8.6e+01 5.7e+02 2.6e+01 0 0 11 1 6 0 0 11 1 6 0 119s SFBcastBegin 8 1.0 9.7350e-06 1.0 0.00e+00 0.0 1.6e+01 1.6e+03 0.0e+00 0 0 2 0 0 0 0 2 0 0 0 119s SFBcastEnd 8 1.0 1.5673e-05 2.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 119s SFReduceBegin 3 1.0 1.8237e-05 1.0 0.00e+00 0.0 5.0e+00 7.6e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 119s SFReduceEnd 3 1.0 4.5370e-06 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 119s SFPack 354 1.0 3.1849e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 119s SFUnpack 354 1.0 3.0813e-05 1.1 6.12e+03 1.1 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 378 119s KSPSetUp 1 1.0 1.2178e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 119s KSPSolve 1 1.0 2.7038e-02 1.0 1.32e+08 1.0 4.8e+02 5.5e+03 8.0e+01 3 63 60 36 17 3 63 60 36 18 9653 119s KSPGMRESOrthog 20 1.0 6.5970e-04 1.0 2.45e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 5 7265 119s PCSetUp_GAMG+ 1 1.0 1.6341e-01 1.0 7.55e+07 1.0 3.0e+02 1.4e+04 3.1e+02 16 36 38 57 67 16 36 38 57 70 911 119s PCGAMGCreateG 2 1.0 5.5754e-03 1.0 1.52e+05 1.0 4.8e+01 1.9e+03 5.0e+01 1 0 6 1 11 1 0 6 1 11 54 119s GAMG Coarsen 4 1.0 1.0693e-02 1.0 0.00e+00 0.0 6.1e+01 9.8e+03 5.3e+01 1 0 8 8 11 1 0 8 8 12 0 119s GAMG MIS/Agg 2 1.0 1.0109e-02 1.0 0.00e+00 0.0 5.1e+01 1.1e+04 4.9e+01 1 0 6 7 11 1 0 6 7 11 0 119s PCGAMGProl 2 1.0 3.4530e-03 1.0 0.00e+00 0.0 8.7e+01 3.7e+03 7.6e+01 0 0 11 4 16 0 0 11 4 17 0 119s GAMG Prol-col 2 1.0 1.3628e-03 1.0 0.00e+00 0.0 7.5e+01 3.0e+03 5.6e+01 0 0 9 3 12 0 0 9 3 13 0 119s GAMG Prol-lift 2 1.0 1.9823e-03 1.0 0.00e+00 0.0 1.2e+01 8.0e+03 1.2e+01 0 0 2 1 3 0 0 2 1 3 0 119s PCGAMGOptProl 2 1.0 1.7934e-02 1.0 2.17e+07 1.1 6.4e+01 1.0e+04 6.6e+01 2 10 8 9 14 2 10 8 9 15 2359 119s GAMG smooth 2 1.0 1.3957e-02 1.0 7.34e+06 1.1 2.4e+01 1.7e+04 2.4e+01 1 3 3 6 5 1 3 3 6 5 1023 119s PCGAMGCreateL 2 1.0 1.2538e-01 1.0 5.36e+07 1.0 4.2e+01 6.0e+04 6.0e+01 13 26 5 34 13 13 26 5 34 14 847 119s GAMG PtAP 2 1.0 1.2423e-01 1.0 5.36e+07 1.0 3.1e+01 8.0e+04 2.6e+01 12 26 4 34 6 12 26 4 34 6 855 119s GAMG Reduce 1 1.0 3.9200e-02 1.0 1.66e+07 1.1 2.2e+01 3.6e+04 4.7e+01 4 8 3 11 10 4 8 3 11 11 818 119s PCGAMG Squ l00 1 1.0 9.7065e-03 1.0 0.00e+00 0.0 1.4e+01 3.6e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 119s PCGAMG Gal l00 1 1.0 8.6268e-02 1.0 3.72e+07 1.0 2.0e+01 8.5e+04 1.3e+01 9 18 2 23 3 9 18 2 23 3 860 119s PCGAMG Opt l00 1 1.0 9.7667e-03 1.0 5.05e+06 1.0 1.2e+01 2.6e+04 1.1e+01 1 2 2 4 2 1 2 2 4 2 1017 119s PCGAMG Gal l01 1 1.0 3.8055e-02 1.0 1.66e+07 1.1 1.1e+01 7.1e+04 1.3e+01 4 8 1 11 3 4 8 1 11 3 842 119s PCGAMG Opt l01 1 1.0 2.8443e-03 1.0 1.74e+06 1.1 1.2e+01 7.7e+03 1.1e+01 0 1 2 1 2 0 1 2 1 2 1153 119s PCSetUp 1 1.0 1.6342e-01 1.0 7.55e+07 1.0 3.0e+02 1.4e+04 3.1e+02 16 36 38 57 67 16 36 38 57 70 911 119s PCSetUpOnBlocks 20 1.0 1.3282e-03 28.1 2.51e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1890 119s PCApply 20 1.0 2.3768e-02 1.0 1.14e+08 1.0 4.4e+02 5.1e+03 2.0e+01 2 54 55 31 4 2 54 55 31 5 9478 119s PCApplyOnBlocks 20 1.0 2.2413e-04 15.7 1.03e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 4585 119s ------------------------------------------------------------------------------------------------------------------------ 119s 119s Object Type Creations Destructions. Reports information only for process 0. 119s 119s --- Event Stage 0: Main Stage 119s 119s Container 11 11 119s Matrix 82 82 119s Matrix Coarsen 2 2 119s Matrix Null Space 1 1 119s Index Set 60 60 119s IS L to G Mapping 5 5 119s Vector 179 179 119s Star Forest Graph 34 34 119s Krylov Solver 7 7 119s Preconditioner 7 7 119s Viewer 2 2 119s PetscRandom 2 2 119s Distributed Mesh 4 4 119s Discrete System 4 4 119s Weak Form 4 4 119s ======================================================================================================================== 119s Average time to get PetscTime(): 3.2e-08 119s Average time for MPI_Barrier(): 4.866e-07 119s Average time for zero size MPI_Send(): 7.06e-07 119s #PETSc Option Table entries: 119s --ndofs 20000 # (source: command line) 119s --problem_type elasticity # (source: command line) 119s --scaling_type strong # (source: command line) 119s -ksp_rtol 1.0e-8 # (source: command line) 119s -ksp_type cg # (source: command line) 119s -ksp_view # (source: command line) 119s -log_view # (source: command line) 119s -matptap_via scalable # (source: command line) 119s -mg_levels_esteig_ksp_type cg # (source: command line) 119s -mg_levels_ksp_type chebyshev # (source: command line) 119s -mg_levels_pc_type jacobi # (source: command line) 119s -options_left # (source: command line) 119s -pc_gamg_coarse_eq_limit 1000 # (source: command line) 119s -pc_type gamg # (source: command line) 119s #End of PETSc Option Table entries 119s Compiled without FORTRAN kernels 119s Compiled with full precision matrices (default) 119s sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 119s Configure options: --build=x86_64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --with-library-name-suffix=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi " --CXX_LINKER_FLAGS="-Wl,--no-as-needed -Wl,-z,defs" --CC_LINKER_FLAGS=-Wl,-z,defs --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real --PETSC_ARCH=x86_64-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" CXXFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" FCFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=3" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,--package-metadata=%7B%22type%22:%22deb%22%2C%22os%22:%22ubuntu%22%2C%22name%22:%22petsc%22%2C%22version%22:%223.24.3+dfsg1-1ubuntu1%22%2C%22architecture%22:%22amd64%22%7D -flto=auto -ffat-lto-objects -Wl,-z,relro -fPIC" MAKEFLAGS= 119s ----------------------------------------- 119s Libraries compiled on 2026-01-26 06:54:57 on reproducible 119s Machine characteristics: Linux-6.8.0-90-generic-x86_64-with-glibc2.42 119s Using PETSc directory: /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real 119s Using PETSc arch: 119s ----------------------------------------- 119s 119s Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -Wdate-time -D_FORTIFY_SOURCE=3 119s Using Fortran compiler: mpif90 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=3 119s ----------------------------------------- 119s 119s Using include paths: -I/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu-dist -I/usr/include/superlu -I/usr/include/scotch -I/usr/include/hdf5/openmpi 119s ----------------------------------------- 119s 119s Using C linker: mpicc 119s Using Fortran linker: mpif90 119s Using libraries: -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/gcc/x86_64-linux-gnu/15 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -lfftw3 -lfftw3_mpi -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu_dist -lsuperlu -llapack -lblas -lptesmumps -lptscotch -lscotch -lptscotcherr -lhdf5 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lm -lOpenCL -lyaml -lX11 -lstdc++ -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ 119s ----------------------------------------- 119s 119s #PETSc Option Table entries: 119s --ndofs 20000 # (source: command line) 119s --problem_type elasticity # (source: command line) 119s --scaling_type strong # (source: command line) 119s -ksp_rtol 1.0e-8 # (source: command line) 119s -ksp_type cg # (source: command line) 119s -ksp_view # (source: command line) 119s -log_view # (source: command line) 119s -matptap_via scalable # (source: command line) 119s -mg_levels_esteig_ksp_type cg # (source: command line) 119s -mg_levels_ksp_type chebyshev # (source: command line) 119s -mg_levels_pc_type jacobi # (source: command line) 119s -options_left # (source: command line) 119s -pc_gamg_coarse_eq_limit 1000 # (source: command line) 119s -pc_type gamg # (source: command line) 119s #End of PETSc Option Table entries 119s WARNING! There are options you set that were not used! 119s WARNING! could be spelling mistake, etc! 119s There are 4 unused database options. They are: 119s Option left: name:--ndofs value: 20000 source: command line 119s Option left: name:--problem_type value: elasticity source: command line 119s Option left: name:--scaling_type value: strong source: command line 119s Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line 119s ==== poisson weak scaling (2 processes with ndofs=10000) ==== 119s [2026-02-02 05:34:43.760] [RANK: 0] [info] Using partitioner with cell data (1 cell types) 119s [2026-02-02 05:34:43.760] [RANK: 0] [info] Compute partition of cells across ranks 119s [2026-02-02 05:34:43.760] [RANK: 0] [info] Building mesh dual graph 119s [2026-02-02 05:34:43.760] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 119s [2026-02-02 05:34:43.788] [RANK: 0] [info] Build nonlocal part of mesh dual graph 119s [2026-02-02 05:34:43.788] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 119s [2026-02-02 05:34:43.788] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 119s [2026-02-02 05:34:43.788] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 1, 1 119s [2026-02-02 05:34:43.789] [RANK: 0] [info] Graph edges (local: 208524, non-local: 1188) 119s [2026-02-02 05:34:43.789] [RANK: 0] [info] Compute graph partition using PT-SCOTCH 121s [2026-02-02 05:34:45.098] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 121s [2026-02-02 05:34:45.102] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 121s [2026-02-02 05:34:45.118] [RANK: 0] [info] Extract basic topology: 212352->212352 121s [2026-02-02 05:34:45.118] [RANK: 0] [info] Build local dual graphs, re-order cells, and compute process boundary vertices. 121s [2026-02-02 05:34:45.118] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 121s [2026-02-02 05:34:45.145] [RANK: 0] [info] GPS pseudo-diameter:(158) 49681-8737 121s [2026-02-02 05:34:45.148] [RANK: 0] [info] Create topology (generalised) 121s [2026-02-02 05:34:45.149] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 121s [2026-02-02 05:34:45.149] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 121s [2026-02-02 05:34:45.157] [RANK: 0] [info] Compute ghost indices 121s [2026-02-02 05:34:45.157] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 121s [2026-02-02 05:34:45.157] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 121s [2026-02-02 05:34:45.160] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 121s [2026-02-02 05:34:45.160] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 121s [2026-02-02 05:34:45.169] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 121s [2026-02-02 05:34:45.169] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 121s [2026-02-02 05:34:45.169] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 121s [2026-02-02 05:34:45.169] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 121s [2026-02-02 05:34:45.171] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 121s [2026-02-02 05:34:45.171] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 121s [2026-02-02 05:34:45.171] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 121s [2026-02-02 05:34:45.171] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 121s [2026-02-02 05:34:45.171] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 121s [2026-02-02 05:34:45.171] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 1, 0.5 121s [2026-02-02 05:34:45.172] [RANK: 0] [info] Create Geometry (multiple) 121s [2026-02-02 05:34:45.172] [RANK: 0] [info] Got 1 dof layouts 121s [2026-02-02 05:34:45.172] [RANK: 0] [info] Checking required entities per dimension 121s [2026-02-02 05:34:45.172] [RANK: 0] [info] Cell type: 0 dofmap: 53088x4 121s [2026-02-02 05:34:45.174] [RANK: 0] [info] Global index computation 121s [2026-02-02 05:34:45.174] [RANK: 0] [info] Got 1 index_maps 121s [2026-02-02 05:34:45.174] [RANK: 0] [info] Get global indices 121s [2026-02-02 05:34:45.174] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 121s [2026-02-02 05:34:45.174] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 121s [2026-02-02 05:34:45.174] [RANK: 0] [info] Calling compute_local_to_global 121s [2026-02-02 05:34:45.174] [RANK: 0] [info] xdofs.size = 212352 121s [2026-02-02 05:34:45.174] [RANK: 0] [info] dofmap sizes = 212352 121s [2026-02-02 05:34:45.174] [RANK: 0] [info] all_dofmaps.size = 212352 121s [2026-02-02 05:34:45.174] [RANK: 0] [info] nodes.size = 10251 121s [2026-02-02 05:34:45.176] [RANK: 0] [info] Creating geometry with 1 dofmaps 121s UnitCube (27x22x30) to be refined 0 times 121s [2026-02-02 05:34:45.176] [RANK: 0] [info] Computing mesh entities of dimension 2 121s [2026-02-02 05:34:45.194] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 121s [2026-02-02 05:34:45.194] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 121s [2026-02-02 05:34:45.210] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 121s [2026-02-02 05:34:45.210] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 121s [2026-02-02 05:34:45.211] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 121s [2026-02-02 05:34:45.211] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. 121s [2026-02-02 05:34:45.212] [RANK: 0] [info] Checking required entities per dimension 121s [2026-02-02 05:34:45.212] [RANK: 0] [info] Cell type: 0 dofmap: 53088x4 121s [2026-02-02 05:34:45.215] [RANK: 0] [info] Global index computation 121s [2026-02-02 05:34:45.215] [RANK: 0] [info] Got 1 index_maps 121s [2026-02-02 05:34:45.215] [RANK: 0] [info] Get global indices 121s [2026-02-02 05:34:45.215] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 121s [2026-02-02 05:34:45.215] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 121s [2026-02-02 05:34:45.216] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) 121s [2026-02-02 05:34:45.225] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 121s [2026-02-02 05:34:45.225] [RANK: 0] [info] Requesting connectivity (3, 0) - (2, 0) 121s [2026-02-02 05:34:45.234] [RANK: 0] [info] Column ghost size increased from 329 to 862 121s ---------------------------------------------------------------- 121s Test problem summary 121s dolfinx version: 0.10.0 121s dolfinx hash: ubuntu 121s ufl hash: 58f3dc30e5e56245b795ae796fe6a103649e8345 121s petsc version: PETSc Release Version 3.24.3, Jan 01, 2026 121s Problem type: poisson 121s Scaling type: weak 121s Num processes: 2 121s Num cells: 106920 (107 thousand) 121s Total degrees of freedom: 19964 (20 thousand) 121s Average degrees of freedom per process: 9982 121s ---------------------------------------------------------------- 121s [2026-02-02 05:34:45.256] [RANK: 0] [info] PETSc Krylov solver starting to solve system. 121s KSP Object: 2 MPI processes 121s type: cg 121s maximum iterations=10000, initial guess is zero 121s tolerances: relative=1e-08, absolute=1e-50, divergence=10000. 121s left preconditioning 121s using PRECONDITIONED norm type for convergence test 121s PC Object: 2 MPI processes 121s type: hypre 121s HYPRE BoomerAMG preconditioning 121s Cycle type V 121s Maximum number of levels 25 121s Maximum number of iterations PER hypre call 1 121s Convergence tolerance PER hypre call 0. 121s Threshold for strong coupling 0.5 121s Interpolation truncation factor 0. 121s Interpolation: max elements per row 0 121s Number of levels of aggressive coarsening 0 121s Number of paths for aggressive coarsening 1 121s Maximum row sums 0.9 121s Sweeps down 1 121s Sweeps up 1 121s Sweeps on coarse 1 121s Relax down symmetric-SOR/Jacobi 121s Relax up symmetric-SOR/Jacobi 121s Relax on coarse Gaussian-elimination 121s Relax weight (all) 1. 121s Outer relax weight (all) 1. 121s Maximum size of coarsest grid 9 121s Minimum size of coarsest grid 1 121s Using CF-relaxation 121s Not using more complex smoothers. 121s Measure type local 121s Coarsen type Falgout 121s Interpolation type classical 121s SpGEMM type hypre 121s linear system matrix = precond matrix: 121s Mat Object: 2 MPI processes 121s type: mpiaij 121s rows=19964, cols=19964 121s total: nonzeros=281986, allocated nonzeros=281986 121s total number of mallocs used during MatSetValues calls=0 121s not using I-node (on process 0) routines 121s 121s [MPI_MAX] Summary of timings (s) | reps avg tot 121s ------------------------------------------------------------------------------------------------------- 121s Build BoxMesh (tetrahedra) | 1 1.417099 1.417099 121s Build dofmap data | 2 0.003244 0.006488 121s Compute connectivity 2-0 | 1 0.000514 0.000514 121s Compute dof reordering map | 2 0.000186 0.000371 121s Compute entities of dim = 2 | 1 0.035195 0.035195 121s Compute graph partition (SCOTCH) | 1 1.304197 1.304197 121s Compute local part of mesh dual graph (mixed) | 2 0.026896 0.053792 121s Compute local-to-local map | 1 0.000760 0.000760 121s Compute non-local part of mesh dual graph | 1 0.001708 0.001708 121s Compute-local-to-global links for global/local adjacency list | 1 0.000543 0.000543 121s Distribute fixed-degree adjacency list to destination ranks | 1 0.025574 0.025574 121s Distribute row-wise data (scalable) | 1 0.000710 0.000710 121s GPS: create_level_structure | 2 0.000334 0.001001 121s Gibbs-Poole-Stockmeyer ordering | 1 0.002870 0.002870 121s Init MPI | 1 0.014462 0.014462 121s Init PETSc | 1 0.000366 0.000366 121s Init dofmap from element dofmap | 2 0.002583 0.005167 121s Init logging | 1 0.000003 0.000003 121s PETSc Krylov solver | 1 0.086452 0.086452 121s SparsityPattern::finalize | 1 0.005889 0.005889 121s Topology: create | 1 0.021547 0.021547 121s Topology: determine shared index ownership | 1 0.000588 0.000588 121s Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.001521 0.001521 121s ZZZ Assemble | 1 0.040004 0.040004 121s ZZZ Assemble matrix | 1 0.018186 0.018186 121s ZZZ Assemble vector | 1 0.003169 0.003169 121s ZZZ Create Mesh | 1 1.417159 1.417159 121s ZZZ Create RHS function | 1 0.009020 0.009020 121s ZZZ Create boundary conditions | 1 0.000683 0.000683 121s ZZZ Create facets and facet->cell connectivity | 1 0.035763 0.035763 121s ZZZ FunctionSpace | 1 0.003870 0.003870 121s ZZZ Solve | 1 0.087371 0.087371 121s *** Number of Krylov iterations: 6 121s *** Solution norm: 30.0262 121s **************************************************************************************************************************************************************** 121s *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** 121s **************************************************************************************************************************************************************** 121s 121s ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ 121s 121s /usr/bin/dolfinx-scaling-test on a named autopkgtest with 2 processes, by ubuntu on Mon Feb 2 05:34:45 2026 121s Using PETSc Release Version 3.24.3, Jan 01, 2026 121s 121s Max Max/Min Avg Total 121s Time (sec): 1.585e+00 1.000 1.585e+00 121s Objects: 0.000e+00 0.000 0.000e+00 121s Flops: 3.115e+06 1.014 3.094e+06 6.188e+06 121s Flops/sec: 1.965e+06 1.014 1.952e+06 3.905e+06 121s MPI Msg Count: 1.400e+01 1.000 1.400e+01 2.800e+01 121s MPI Msg Len (bytes): 1.025e+05 1.000 7.319e+03 2.049e+05 121s MPI Reductions: 6.900e+01 1.000 121s 121s Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) 121s e.g., VecAXPY() for real vectors of length N --> 2N flops 121s and VecAXPY() for complex vectors of length N --> 8N flops 121s 121s Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- 121s Avg %Total Avg %Total Count %Total Avg %Total Count %Total 121s 0: Main Stage: 1.5849e+00 100.0% 6.1881e+06 100.0% 2.800e+01 100.0% 7.319e+03 100.0% 5.100e+01 73.9% 121s 121s ------------------------------------------------------------------------------------------------------------------------ 121s See the 'Profiling' chapter of the users' manual for details on interpreting output. 121s Phase summary info: 121s Count: number of times phase was executed 121s Time and Flop: Max - maximum over all processes 121s Ratio - ratio of maximum to minimum over all processes 121s Mess: number of messages sent 121s AvgLen: average message length (bytes) 121s Reduct: number of global reductions 121s Global: entire computation 121s Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). 121s %T - percent time in this phase %F - percent flop in this phase 121s %M - percent messages in this phase %L - percent message lengths in this phase 121s %R - percent reductions in this phase 121s Total Mflop/s: 1e-6 * (sum of flop over all processes)/(max time over all processes) 121s ------------------------------------------------------------------------------------------------------------------------ 121s Event Count Time (sec) Flop --- Global --- --- Stage ---- Total 121s Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s 121s ------------------------------------------------------------------------------------------------------------------------ 121s 121s --- Event Stage 0: Main Stage 121s 121s BuildTwoSided 5 1.0 1.5656e-04 6.2 0.00e+00 0.0 8.0e+00 4.0e+00 5.0e+00 0 0 29 0 7 0 0 29 0 10 0 121s BuildTwoSidedF 2 1.0 1.5626e-04 6.1 0.00e+00 0.0 4.0e+00 2.7e+04 2.0e+00 0 0 14 53 3 0 0 14 53 4 0 121s MatMult 6 1.0 6.1538e-04 1.0 1.64e+06 1.0 1.2e+01 7.0e+03 0.0e+00 0 53 43 41 0 0 53 43 41 0 5304 121s MatConvert 1 1.0 2.0982e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 121s MatAssemblyBegin 5 1.0 7.5733e-04 1.1 0.00e+00 0.0 4.0e+00 2.7e+04 2.0e+00 0 0 14 53 3 0 0 14 53 4 0 121s MatAssemblyEnd 5 1.0 1.4141e-03 1.2 2.21e+03 1.0 4.0e+00 1.7e+03 5.0e+00 0 0 14 3 7 0 0 14 3 10 3 121s MatGetRowIJ 4 1.0 6.7100e-07 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 121s MatView 1 1.0 1.0599e-03 5.5 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 121s MatSetPreallCOO 2 1.0 1.0228e-03 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 121s MatSetValuesCOO 2 1.0 3.2025e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 121s VecTDot 14 1.0 1.3774e-04 1.0 2.81e+05 1.0 0.0e+00 0.0e+00 1.4e+01 0 9 0 0 20 0 9 0 0 27 4058 121s VecNorm 7 1.0 8.7961e-05 1.2 1.41e+05 1.0 0.0e+00 0.0e+00 7.0e+00 0 5 0 0 10 0 5 0 0 14 3177 121s VecCopy 2 1.0 1.1147e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 121s VecSet 8 1.0 1.3048e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 121s VecAXPY 12 1.0 3.7707e-05 1.0 2.41e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 12707 121s VecAYPX 5 1.0 1.8980e-05 1.0 1.00e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 10518 121s VecScatterBegin 6 1.0 3.1537e-05 1.0 0.00e+00 0.0 1.2e+01 7.0e+03 0.0e+00 0 0 43 41 0 0 0 43 41 0 0 121s VecScatterEnd 6 1.0 4.7450e-05 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 121s SFSetGraph 3 1.0 1.0366e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 121s SFSetUp 3 1.0 3.9689e-05 1.0 0.00e+00 0.0 1.2e+01 1.0e+03 3.0e+00 0 0 43 6 4 0 0 43 6 6 0 121s SFPack 6 1.0 1.1968e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 121s SFUnpack 6 1.0 4.8200e-07 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 121s KSPSetUp 1 1.0 1.4271e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 121s KSPSolve 1 1.0 2.5774e-02 1.0 2.41e+06 1.0 1.2e+01 7.0e+03 2.1e+01 2 77 43 41 30 2 77 43 41 41 186 121s PCSetUp 1 1.0 5.9579e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 4 0 0 0 3 4 0 0 0 4 0 121s PCApply 7 1.0 2.4853e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 2 0 0 0 0 2 0 0 0 0 0 121s ------------------------------------------------------------------------------------------------------------------------ 121s 121s Object Type Creations Destructions. Reports information only for process 0. 121s 121s --- Event Stage 0: Main Stage 121s 121s Container 2 2 121s Matrix 7 7 121s Index Set 6 6 121s IS L to G Mapping 1 1 121s Vector 12 12 121s Star Forest Graph 3 3 121s Krylov Solver 1 1 121s Preconditioner 1 1 121s Viewer 1 1 121s ======================================================================================================================== 121s Average time to get PetscTime(): 3.1e-08 121s Average time for MPI_Barrier(): 6.43e-07 121s Average time for zero size MPI_Send(): 1.97145e-05 121s #PETSc Option Table entries: 121s --ndofs 10000 # (source: command line) 121s --problem_type poisson # (source: command line) 121s --scaling_type weak # (source: command line) 121s -ksp_rtol 1.0e-8 # (source: command line) 121s -ksp_type cg # (source: command line) 121s -ksp_view # (source: command line) 121s -log_view # (source: command line) 121s -options_left # (source: command line) 121s -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) 121s -pc_hypre_type boomeramg # (source: command line) 121s -pc_type hypre # (source: command line) 121s #End of PETSc Option Table entries 121s Compiled without FORTRAN kernels 121s Compiled with full precision matrices (default) 121s sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 121s Configure options: --build=x86_64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --with-library-name-suffix=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi " --CXX_LINKER_FLAGS="-Wl,--no-as-needed -Wl,-z,defs" --CC_LINKER_FLAGS=-Wl,-z,defs --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real --PETSC_ARCH=x86_64-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" CXXFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" FCFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=3" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,--package-metadata=%7B%22type%22:%22deb%22%2C%22os%22:%22ubuntu%22%2C%22name%22:%22petsc%22%2C%22version%22:%223.24.3+dfsg1-1ubuntu1%22%2C%22architecture%22:%22amd64%22%7D -flto=auto -ffat-lto-objects -Wl,-z,relro -fPIC" MAKEFLAGS= 121s ----------------------------------------- 121s Libraries compiled on 2026-01-26 06:54:57 on reproducible 121s Machine characteristics: Linux-6.8.0-90-generic-x86_64-with-glibc2.42 121s Using PETSc directory: /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real 121s Using PETSc arch: 121s ----------------------------------------- 121s 121s Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -Wdate-time -D_FORTIFY_SOURCE=3 121s Using Fortran compiler: mpif90 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=3 121s ----------------------------------------- 121s 121s Using include paths: -I/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu-dist -I/usr/include/superlu -I/usr/include/scotch -I/usr/include/hdf5/openmpi 121s ----------------------------------------- 121s 121s Using C linker: mpicc 121s Using Fortran linker: mpif90 121s Using libraries: -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/gcc/x86_64-linux-gnu/15 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -lfftw3 -lfftw3_mpi -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu_dist -lsuperlu -llapack -lblas -lptesmumps -lptscotch -lscotch -lptscotcherr -lhdf5 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lm -lOpenCL -lyaml -lX11 -lstdc++ -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ 121s ----------------------------------------- 121s 121s #PETSc Option Table entries: 121s --ndofs 10000 # (source: command line) 121s --problem_type poisson # (source: command line) 121s --scaling_type weak # (source: command line) 121s -ksp_rtol 1.0e-8 # (source: command line) 121s -ksp_type cg # (source: command line) 121s -ksp_view # (source: command line) 121s -log_view # (source: command line) 121s -options_left # (source: command line) 121s -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) 121s -pc_hypre_type boomeramg # (source: command line) 121s -pc_type hypre # (source: command line) 121s #End of PETSc Option Table entries 121s WARNING! There are options you set that were not used! 121s WARNING! could be spelling mistake, etc! 121s There are 3 unused database options. They are: 121s Option left: name:--ndofs value: 10000 source: command line 121s Option left: name:--problem_type value: poisson source: command line 121s Option left: name:--scaling_type value: weak source: command line 121s ==== poisson strong scaling (2 processes with ndofs=20000) ==== 121s [2026-02-02 05:34:45.583] [RANK: 0] [info] Using partitioner with cell data (1 cell types) 121s [2026-02-02 05:34:45.584] [RANK: 0] [info] Compute partition of cells across ranks 121s [2026-02-02 05:34:45.584] [RANK: 0] [info] Building mesh dual graph 121s [2026-02-02 05:34:45.584] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 121s [2026-02-02 05:34:45.612] [RANK: 0] [info] Build nonlocal part of mesh dual graph 121s [2026-02-02 05:34:45.612] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 121s [2026-02-02 05:34:45.612] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 121s [2026-02-02 05:34:45.612] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 1, 1 121s [2026-02-02 05:34:45.613] [RANK: 0] [info] Graph edges (local: 208524, non-local: 1188) 121s [2026-02-02 05:34:45.613] [RANK: 0] [info] Compute graph partition using PT-SCOTCH 123s [2026-02-02 05:34:46.948] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 123s [2026-02-02 05:34:46.954] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 123s [2026-02-02 05:34:46.975] [RANK: 0] [info] Extract basic topology: 213500->213500 123s [2026-02-02 05:34:46.975] [RANK: 0] [info] Build local dual graphs, re-order cells, and compute process boundary vertices. 123s [2026-02-02 05:34:46.975] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 123s [2026-02-02 05:34:47.028] [RANK: 0] [info] GPS pseudo-diameter:(161) 3407-49910 123s [2026-02-02 05:34:47.034] [RANK: 0] [info] Create topology (generalised) 123s [2026-02-02 05:34:47.038] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 123s [2026-02-02 05:34:47.040] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 123s [2026-02-02 05:34:47.048] [RANK: 0] [info] Compute ghost indices 123s [2026-02-02 05:34:47.048] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 123s [2026-02-02 05:34:47.048] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 123s [2026-02-02 05:34:47.051] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 123s [2026-02-02 05:34:47.051] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 123s [2026-02-02 05:34:47.059] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 123s [2026-02-02 05:34:47.059] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 123s [2026-02-02 05:34:47.059] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 123s [2026-02-02 05:34:47.059] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 123s [2026-02-02 05:34:47.061] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 123s [2026-02-02 05:34:47.061] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 123s [2026-02-02 05:34:47.061] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 123s [2026-02-02 05:34:47.061] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 123s [2026-02-02 05:34:47.062] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 123s [2026-02-02 05:34:47.062] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 1, 0.5 123s [2026-02-02 05:34:47.062] [RANK: 0] [info] Create Geometry (multiple) 123s [2026-02-02 05:34:47.062] [RANK: 0] [info] Got 1 dof layouts 123s [2026-02-02 05:34:47.062] [RANK: 0] [info] Checking required entities per dimension 123s [2026-02-02 05:34:47.062] [RANK: 0] [info] Cell type: 0 dofmap: 53375x4 123s [2026-02-02 05:34:47.064] [RANK: 0] [info] Global index computation 123s [2026-02-02 05:34:47.064] [RANK: 0] [info] Got 1 index_maps 123s [2026-02-02 05:34:47.064] [RANK: 0] [info] Get global indices 123s [2026-02-02 05:34:47.065] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 123s [2026-02-02 05:34:47.065] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 123s [2026-02-02 05:34:47.065] [RANK: 0] [info] Calling compute_local_to_global 123s [2026-02-02 05:34:47.065] [RANK: 0] [info] xdofs.size = 213500 123s [2026-02-02 05:34:47.065] [RANK: 0] [info] dofmap sizes = 213500 123s [2026-02-02 05:34:47.065] [RANK: 0] [info] all_dofmaps.size = 213500 123s [2026-02-02 05:34:47.065] [RANK: 0] [info] nodes.size = 10298 123s [2026-02-02 05:34:47.066] [RANK: 0] [info] Creating geometry with 1 dofmaps 123s UnitCube (27x22x30) to be refined 0 times 123s [2026-02-02 05:34:47.067] [RANK: 0] [info] Computing mesh entities of dimension 2 123s [2026-02-02 05:34:47.085] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 123s [2026-02-02 05:34:47.085] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 123s [2026-02-02 05:34:47.100] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 123s [2026-02-02 05:34:47.101] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 123s [2026-02-02 05:34:47.102] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 123s [2026-02-02 05:34:47.102] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. 123s [2026-02-02 05:34:47.102] [RANK: 0] [info] Checking required entities per dimension 123s [2026-02-02 05:34:47.102] [RANK: 0] [info] Cell type: 0 dofmap: 53375x4 123s [2026-02-02 05:34:47.104] [RANK: 0] [info] Global index computation 123s [2026-02-02 05:34:47.104] [RANK: 0] [info] Got 1 index_maps 123s [2026-02-02 05:34:47.105] [RANK: 0] [info] Get global indices 123s [2026-02-02 05:34:47.105] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 123s [2026-02-02 05:34:47.105] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 123s [2026-02-02 05:34:47.105] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) 123s [2026-02-02 05:34:47.115] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 123s [2026-02-02 05:34:47.115] [RANK: 0] [info] Requesting connectivity (3, 0) - (2, 0) 123s [2026-02-02 05:34:47.123] [RANK: 0] [info] Column ghost size increased from 326 to 871 123s ---------------------------------------------------------------- 123s Test problem summary 123s dolfinx version: 0.10.0 123s dolfinx hash: ubuntu 123s ufl hash: 58f3dc30e5e56245b795ae796fe6a103649e8345 123s petsc version: PETSc Release Version 3.24.3, Jan 01, 2026 123s Problem type: poisson 123s Scaling type: strong 123s Num processes: 2 123s Num cells: 106920 (107 thousand) 123s Total degrees of freedom: 19964 (20 thousand) 123s Average degrees of freedom per process: 9982 123s ---------------------------------------------------------------- 123s [2026-02-02 05:34:47.146] [RANK: 0] [info] PETSc Krylov solver starting to solve system. 123s KSP Object: 2 MPI processes 123s type: cg 123s maximum iterations=10000, initial guess is zero 123s tolerances: relative=1e-08, absolute=1e-50, divergence=10000. 123s left preconditioning 123s using PRECONDITIONED norm type for convergence test 123s PC Object: 2 MPI processes 123s type: hypre 123s HYPRE BoomerAMG preconditioning 123s Cycle type V 123s Maximum number of levels 25 123s Maximum number of iterations PER hypre call 1 123s Convergence tolerance PER hypre call 0. 123s Threshold for strong coupling 0.5 123s Interpolation truncation factor 0. 123s Interpolation: max elements per row 0 123s Number of levels of aggressive coarsening 0 123s Number of paths for aggressive coarsening 1 123s Maximum row sums 0.9 123s Sweeps down 1 123s Sweeps up 1 123s Sweeps on coarse 1 123s Relax down symmetric-SOR/Jacobi 123s Relax up symmetric-SOR/Jacobi 123s Relax on coarse Gaussian-elimination 123s Relax weight (all) 1. 123s Outer relax weight (all) 1. 123s Maximum size of coarsest grid 9 123s Minimum size of coarsest grid 1 123s Using CF-relaxation 123s Not using more complex smoothers. 123s Measure type local 123s Coarsen type Falgout 123s Interpolation type classical 123s SpGEMM type hypre 123s linear system matrix = precond matrix: 123s Mat Object: 2 MPI processes 123s type: mpiaij 123s rows=19964, cols=19964 123s total: nonzeros=281986, allocated nonzeros=281986 123s total number of mallocs used during MatSetValues calls=0 123s not using I-node (on process 0) routines 123s 123s [MPI_MAX] Summary of timings (s) | reps avg tot 123s ------------------------------------------------------------------------------------------------------- 123s Build BoxMesh (tetrahedra) | 1 1.484009 1.484009 123s Build dofmap data | 2 0.002919 0.005839 123s Compute connectivity 2-0 | 1 0.000494 0.000494 123s Compute dof reordering map | 2 0.000171 0.000342 123s Compute entities of dim = 2 | 1 0.035054 0.035054 123s Compute graph partition (SCOTCH) | 1 1.333042 1.333042 123s Compute local part of mesh dual graph (mixed) | 2 0.040242 0.080485 123s Compute local-to-local map | 1 0.000782 0.000782 123s Compute non-local part of mesh dual graph | 1 0.002072 0.002072 123s Compute-local-to-global links for global/local adjacency list | 1 0.000541 0.000541 123s Distribute fixed-degree adjacency list to destination ranks | 1 0.028299 0.028299 123s Distribute row-wise data (scalable) | 1 0.000658 0.000658 123s GPS: create_level_structure | 2 0.001023 0.003069 123s Gibbs-Poole-Stockmeyer ordering | 1 0.006848 0.006848 123s Init MPI | 1 0.012907 0.012907 123s Init PETSc | 1 0.000465 0.000465 123s Init dofmap from element dofmap | 2 0.002249 0.004497 123s Init logging | 1 0.000003 0.000003 123s PETSc Krylov solver | 1 0.063838 0.063838 123s SparsityPattern::finalize | 1 0.005748 0.005748 123s Topology: create | 1 0.025361 0.025361 123s Topology: determine shared index ownership | 1 0.004614 0.004614 123s Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.003546 0.003546 123s ZZZ Assemble | 1 0.039468 0.039468 123s ZZZ Assemble matrix | 1 0.017866 0.017866 123s ZZZ Assemble vector | 1 0.003305 0.003305 123s ZZZ Create Mesh | 1 1.484123 1.484123 123s ZZZ Create RHS function | 1 0.008964 0.008964 123s ZZZ Create boundary conditions | 1 0.000673 0.000673 123s ZZZ Create facets and facet->cell connectivity | 1 0.035575 0.035575 123s ZZZ FunctionSpace | 1 0.003010 0.003010 123s ZZZ Solve | 1 0.064827 0.064827 123s *** Number of Krylov iterations: 6 123s *** Solution norm: 30.0262 123s **************************************************************************************************************************************************************** 123s *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** 123s **************************************************************************************************************************************************************** 123s 123s ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ 123s 123s /usr/bin/dolfinx-scaling-test on a named autopkgtest with 2 processes, by ubuntu on Mon Feb 2 05:34:47 2026 123s Using PETSc Release Version 3.24.3, Jan 01, 2026 123s 123s Max Max/Min Avg Total 123s Time (sec): 1.628e+00 1.000 1.628e+00 123s Objects: 0.000e+00 0.000 0.000e+00 123s Flops: 3.098e+06 1.003 3.094e+06 6.188e+06 123s Flops/sec: 1.903e+06 1.003 1.900e+06 3.800e+06 123s MPI Msg Count: 1.400e+01 1.000 1.400e+01 2.800e+01 123s MPI Msg Len (bytes): 1.030e+05 1.000 7.355e+03 2.060e+05 123s MPI Reductions: 6.900e+01 1.000 123s 123s Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) 123s e.g., VecAXPY() for real vectors of length N --> 2N flops 123s and VecAXPY() for complex vectors of length N --> 8N flops 123s 123s Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- 123s Avg %Total Avg %Total Count %Total Avg %Total Count %Total 123s 0: Main Stage: 1.6281e+00 100.0% 6.1876e+06 100.0% 2.800e+01 100.0% 7.355e+03 100.0% 5.100e+01 73.9% 123s 123s ------------------------------------------------------------------------------------------------------------------------ 123s See the 'Profiling' chapter of the users' manual for details on interpreting output. 123s Phase summary info: 123s Count: number of times phase was executed 123s Time and Flop: Max - maximum over all processes 123s Ratio - ratio of maximum to minimum over all processes 123s Mess: number of messages sent 123s AvgLen: average message length (bytes) 123s Reduct: number of global reductions 123s Global: entire computation 123s Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). 123s %T - percent time in this phase %F - percent flop in this phase 123s %M - percent messages in this phase %L - percent message lengths in this phase 123s %R - percent reductions in this phase 123s Total Mflop/s: 1e-6 * (sum of flop over all processes)/(max time over all processes) 123s ------------------------------------------------------------------------------------------------------------------------ 123s Event Count Time (sec) Flop --- Global --- --- Stage ---- Total 123s Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s 123s ------------------------------------------------------------------------------------------------------------------------ 123s 123s --- Event Stage 0: Main Stage 123s 123s BuildTwoSided 5 1.0 3.4350e-04 14.6 0.00e+00 0.0 8.0e+00 4.0e+00 5.0e+00 0 0 29 0 7 0 0 29 0 10 0 123s BuildTwoSidedF 2 1.0 3.3851e-04 15.6 0.00e+00 0.0 4.0e+00 2.8e+04 2.0e+00 0 0 14 53 3 0 0 14 53 4 0 123s MatMult 6 1.0 6.1603e-04 1.0 1.63e+06 1.0 1.2e+01 7.0e+03 0.0e+00 0 53 43 41 0 0 53 43 41 0 5298 123s MatConvert 1 1.0 1.9138e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 123s MatAssemblyBegin 5 1.0 1.0150e-03 1.4 0.00e+00 0.0 4.0e+00 2.8e+04 2.0e+00 0 0 14 53 3 0 0 14 53 4 0 123s MatAssemblyEnd 5 1.0 1.5884e-03 1.3 2.17e+03 1.0 4.0e+00 1.7e+03 5.0e+00 0 0 14 3 7 0 0 14 3 10 3 123s MatGetRowIJ 4 1.0 5.9000e-07 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 123s MatView 1 1.0 1.4287e-03 3.9 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 123s MatSetPreallCOO 2 1.0 8.1850e-04 1.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 123s MatSetValuesCOO 2 1.0 3.0712e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 123s VecTDot 14 1.0 1.2804e-04 1.0 2.80e+05 1.0 0.0e+00 0.0e+00 1.4e+01 0 9 0 0 20 0 9 0 0 27 4366 123s VecNorm 7 1.0 1.2199e-04 1.7 1.40e+05 1.0 0.0e+00 0.0e+00 7.0e+00 0 5 0 0 10 0 5 0 0 14 2291 123s VecCopy 2 1.0 1.0185e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 123s VecSet 8 1.0 1.1308e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 123s VecAXPY 12 1.0 2.7102e-05 1.0 2.40e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 17679 123s VecAYPX 5 1.0 1.8137e-05 1.0 9.99e+04 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 11007 123s VecScatterBegin 6 1.0 2.9754e-05 1.0 0.00e+00 0.0 1.2e+01 7.0e+03 0.0e+00 0 0 43 41 0 0 0 43 41 0 0 123s VecScatterEnd 6 1.0 5.2008e-05 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 123s SFSetGraph 3 1.0 1.0306e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 123s SFSetUp 3 1.0 4.4015e-05 1.1 0.00e+00 0.0 1.2e+01 1.0e+03 3.0e+00 0 0 43 6 4 0 0 43 6 6 0 123s SFPack 6 1.0 1.1255e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 123s SFUnpack 6 1.0 5.8100e-07 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 123s KSPSetUp 1 1.0 1.4052e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 123s KSPSolve 1 1.0 1.9224e-02 1.0 2.39e+06 1.0 1.2e+01 7.0e+03 2.1e+01 1 77 43 41 30 1 77 43 41 41 249 123s PCSetUp 1 1.0 4.2911e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 3 0 0 0 3 3 0 0 0 4 0 123s PCApply 7 1.0 1.8329e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 1 0 0 0 0 1 0 0 0 0 0 123s ------------------------------------------------------------------------------------------------------------------------ 123s 123s Object Type Creations Destructions. Reports information only for process 0. 123s 123s --- Event Stage 0: Main Stage 123s 123s Container 2 2 123s Matrix 7 7 123s Index Set 6 6 123s IS L to G Mapping 1 1 123s Vector 12 12 123s Star Forest Graph 3 3 123s Krylov Solver 1 1 123s Preconditioner 1 1 123s Viewer 1 1 123s ======================================================================================================================== 123s Average time to get PetscTime(): 3.11e-08 123s Average time for MPI_Barrier(): 5.288e-07 123s Average time for zero size MPI_Send(): 3.956e-06 123s #PETSc Option Table entries: 123s --ndofs 20000 # (source: command line) 123s --problem_type poisson # (source: command line) 123s --scaling_type strong # (source: command line) 123s -ksp_rtol 1.0e-8 # (source: command line) 123s -ksp_type cg # (source: command line) 123s -ksp_view # (source: command line) 123s -log_view # (source: command line) 123s -options_left # (source: command line) 123s -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) 123s -pc_hypre_type boomeramg # (source: command line) 123s -pc_type hypre # (source: command line) 123s #End of PETSc Option Table entries 123s Compiled without FORTRAN kernels 123s Compiled with full precision matrices (default) 123s sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 123s Configure options: --build=x86_64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --with-library-name-suffix=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi " --CXX_LINKER_FLAGS="-Wl,--no-as-needed -Wl,-z,defs" --CC_LINKER_FLAGS=-Wl,-z,defs --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real --PETSC_ARCH=x86_64-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" CXXFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" FCFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=3" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,--package-metadata=%7B%22type%22:%22deb%22%2C%22os%22:%22ubuntu%22%2C%22name%22:%22petsc%22%2C%22version%22:%223.24.3+dfsg1-1ubuntu1%22%2C%22architecture%22:%22amd64%22%7D -flto=auto -ffat-lto-objects -Wl,-z,relro -fPIC" MAKEFLAGS= 123s ----------------------------------------- 123s Libraries compiled on 2026-01-26 06:54:57 on reproducible 123s Machine characteristics: Linux-6.8.0-90-generic-x86_64-with-glibc2.42 123s Using PETSc directory: /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real 123s Using PETSc arch: 123s ----------------------------------------- 123s 123s Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -Wdate-time -D_FORTIFY_SOURCE=3 123s Using Fortran compiler: mpif90 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=3 123s ----------------------------------------- 123s 123s Using include paths: -I/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu-dist -I/usr/include/superlu -I/usr/include/scotch -I/usr/include/hdf5/openmpi 123s ----------------------------------------- 123s 123s Using C linker: mpicc 123s Using Fortran linker: mpif90 123s Using libraries: -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/gcc/x86_64-linux-gnu/15 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -lfftw3 -lfftw3_mpi -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu_dist -lsuperlu -llapack -lblas -lptesmumps -lptscotch -lscotch -lptscotcherr -lhdf5 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lm -lOpenCL -lyaml -lX11 -lstdc++ -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ 123s ----------------------------------------- 123s 123s #PETSc Option Table entries: 123s --ndofs 20000 # (source: command line) 123s --problem_type poisson # (source: command line) 123s --scaling_type strong # (source: command line) 123s -ksp_rtol 1.0e-8 # (source: command line) 123s -ksp_type cg # (source: command line) 123s -ksp_view # (source: command line) 123s -log_view # (source: command line) 123s -options_left # (source: command line) 123s -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) 123s -pc_hypre_type boomeramg # (source: command line) 123s -pc_type hypre # (source: command line) 123s #End of PETSc Option Table entries 123s WARNING! There are options you set that were not used! 123s WARNING! could be spelling mistake, etc! 123s There are 3 unused database options. They are: 123s Option left: name:--ndofs value: 20000 source: command line 123s Option left: name:--problem_type value: poisson source: command line 123s Option left: name:--scaling_type value: strong source: command line 123s autopkgtest [05:34:47]: test dolfinx-performance-test-binary: -----------------------] 124s dolfinx-performance-test-binary PASS 124s autopkgtest [05:34:48]: test dolfinx-performance-test-binary: - - - - - - - - - - results - - - - - - - - - - 125s autopkgtest [05:34:49]: test dolfinx-performance-test-source: preparing testbed 125s Reading package lists... 125s Building dependency tree... 125s Reading state information... 125s Solving dependencies... 125s 0 upgraded, 0 newly installed, 0 to remove and 60 not upgraded. 126s autopkgtest [05:34:50]: test dolfinx-performance-test-source: [----------------------- 126s -- The C compiler identification is GNU 15.2.0 126s -- The CXX compiler identification is GNU 15.2.0 126s -- Detecting C compiler ABI info 126s -- Detecting C compiler ABI info - done 126s -- Check for working C compiler: /usr/bin/cc - skipped 126s -- Detecting C compile features 126s -- Detecting C compile features - done 126s -- Detecting CXX compiler ABI info 126s -- Detecting CXX compiler ABI info - done 126s -- Check for working CXX compiler: /usr/bin/c++ - skipped 126s -- Detecting CXX compile features 126s -- Detecting CXX compile features - done 126s -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") 127s -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") 127s -- Found MPI: TRUE (found version "3.1") 127s -- Performing Test CMAKE_HAVE_LIBC_PTHREAD 127s -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success 127s -- Found Threads: TRUE 127s -- Found Boost 1.88.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.88.0 127s -- Requested configuration: REQUIRED 127s -- Found boost_headers 1.88.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.88.0 127s -- Checking for Basix hints with /usr/bin/python3 127s -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints 127s -- HDF5: Using hdf5 compiler wrapper to determine C configuration 127s -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.14.6") found components: C 127s -- HDF5_DIR: HDF5_DIR-NOTFOUND 127s -- HDF5_DEFINITIONS: 127s -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi 127s -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so 127s -- HDF5_HL_LIBRARIES: 127s -- HDF5_C_DEFINITIONS: 127s -- HDF5_C_INCLUDE_DIR: 127s -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi 127s -- HDF5_C_LIBRARY: 127s -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so 127s -- HDF5_C_HL_LIBRARY: 127s -- HDF5_C_HL_LIBRARIES: 127s -- Defined targets (if any): 127s -- ... hdf5::hdf5 127s -- Found PkgConfig: /usr/bin/pkg-config (found version "2.5.1") 127s -- Checking for one of the modules 'PETSc;petsc' 127s -- Looking for PETSC_USE_COMPLEX 127s -- Looking for PETSC_USE_COMPLEX - not found 127s -- Checking for one of the modules 'SLEPc;slepc' 127s -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.11.0", minimum required is "2.8.1") found components: CXX 127s -- Found Boost 1.88.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.88.0 127s -- Requested configuration: QUIET REQUIRED COMPONENTS program_options 127s -- Found boost_program_options 1.88.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_program_options-1.88.0 127s -- [x] libboost_program_options.so.1.88.0 127s -- [ ] libboost_program_options.a 127s -- Adding boost_program_options dependencies: headers 127s -- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.88.0/BoostConfig.cmake (found suitable version "1.88.0", minimum required is "1.70") found components: program_options 127s -- -Ofast -g -Wall 127s -- Configuring done (1.1s) 127s CMake Warning (dev) at CMakeLists.txt:52 (find_package): 127s Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake 127s --help-policy CMP0167" for policy details. Use the cmake_policy command to 127s set the policy and suppress this warning. 127s 127s This warning is for project developers. Use -Wno-dev to suppress it. 127s 127s -- Generating done (0.0s) 127s -- Build files have been written to: /tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build 127s /usr/bin/cmake -S/tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build -B/tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build --check-build-system CMakeFiles/Makefile.cmake 0 127s /usr/bin/cmake -E cmake_progress_start /tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build/CMakeFiles /tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build//CMakeFiles/progress.marks 127s make -f CMakeFiles/Makefile2 all 127s make[1]: Entering directory '/tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build' 127s make -f CMakeFiles/dolfinx-scaling-test.dir/build.make CMakeFiles/dolfinx-scaling-test.dir/depend 127s make[2]: Entering directory '/tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build' 127s [ 9%] Generating Poisson.c 127s ffcx /tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build/Poisson.py 128s [ 18%] Generating Elasticity.c 128s ffcx /tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build/Elasticity.py 128s cd /tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build /tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build /tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build /tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build /tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build/CMakeFiles/dolfinx-scaling-test.dir/DependInfo.cmake "--color=" 128s make[2]: Leaving directory '/tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build' 128s make -f CMakeFiles/dolfinx-scaling-test.dir/build.make CMakeFiles/dolfinx-scaling-test.dir/build 128s make[2]: Entering directory '/tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build' 128s [ 27%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o 128s /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DDOLFINX_VERSION=\"0.10.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DMDSPAN_USE_BRACKET_OPERATOR=0 -DMDSPAN_USE_PAREN_OPERATOR=1 -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real/include -Ofast -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=3 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -c /tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build/main.cpp 135s [ 36%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o 135s /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DDOLFINX_VERSION=\"0.10.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DMDSPAN_USE_BRACKET_OPERATOR=0 -DMDSPAN_USE_PAREN_OPERATOR=1 -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real/include -Ofast -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=3 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o -c /tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build/mesh.cpp 144s [ 45%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o 144s /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DDOLFINX_VERSION=\"0.10.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DMDSPAN_USE_BRACKET_OPERATOR=0 -DMDSPAN_USE_PAREN_OPERATOR=1 -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real/include -Ofast -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=3 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o -c /tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build/elasticity_problem.cpp 164s [ 54%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o 164s /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DDOLFINX_VERSION=\"0.10.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DMDSPAN_USE_BRACKET_OPERATOR=0 -DMDSPAN_USE_PAREN_OPERATOR=1 -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real/include -Ofast -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=3 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o -c /tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build/cgpoisson_problem.cpp 180s [ 63%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o 180s /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DDOLFINX_VERSION=\"0.10.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DMDSPAN_USE_BRACKET_OPERATOR=0 -DMDSPAN_USE_PAREN_OPERATOR=1 -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real/include -Ofast -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=3 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o -c /tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build/poisson_problem.cpp 199s [ 72%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o 199s /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DDOLFINX_VERSION=\"0.10.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DMDSPAN_USE_BRACKET_OPERATOR=0 -DMDSPAN_USE_PAREN_OPERATOR=1 -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real/include -Ofast -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=3 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o -c /tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build/mem.cpp 200s [ 81%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o 200s /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DDOLFINX_VERSION=\"0.10.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DMDSPAN_USE_BRACKET_OPERATOR=0 -DMDSPAN_USE_PAREN_OPERATOR=1 -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real/include -Ofast -g -Wall -Wdate-time -D_FORTIFY_SOURCE=3 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o -MF CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o.d -o CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o -c /tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build/Elasticity.c 202s [ 90%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o 202s /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DDOLFINX_VERSION=\"0.10.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DMDSPAN_USE_BRACKET_OPERATOR=0 -DMDSPAN_USE_PAREN_OPERATOR=1 -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real/include -Ofast -g -Wall -Wdate-time -D_FORTIFY_SOURCE=3 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o -MF CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o.d -o CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o -c /tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build/Poisson.c 203s [100%] Linking CXX executable dolfinx-scaling-test 203s /usr/bin/cmake -E cmake_link_script CMakeFiles/dolfinx-scaling-test.dir/link.txt --verbose=1 203s /usr/bin/c++ -Ofast -g -Wall -Wl,--dependency-file=CMakeFiles/dolfinx-scaling-test.dir/link.d "CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o" "CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o" -o dolfinx-scaling-test -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib: /usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.10.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.88.0 -lpthread /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.10.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.15.3 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx_mpi.so.2.11.0 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx.so.2.11.0 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib/libpetsc_real.so 203s make[2]: Leaving directory '/tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build' 203s [100%] Built target dolfinx-scaling-test 203s make[1]: Leaving directory '/tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build' 203s /usr/bin/cmake -E cmake_progress_start /tmp/autopkgtest.1sesNV/build.oW9/src/dolfinx-performance-tests-build/CMakeFiles 0 203s ==== elasticity weak scaling (2 processes with ndofs=10000) ==== 203s [2026-02-02 05:36:07.781] [RANK: 0] [info] Using partitioner with cell data (1 cell types) 203s [2026-02-02 05:36:07.781] [RANK: 0] [info] Compute partition of cells across ranks 203s [2026-02-02 05:36:07.781] [RANK: 0] [info] Building mesh dual graph 203s [2026-02-02 05:36:07.781] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 203s [2026-02-02 05:36:07.789] [RANK: 0] [info] Build nonlocal part of mesh dual graph 203s [2026-02-02 05:36:07.790] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 203s [2026-02-02 05:36:07.790] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 203s [2026-02-02 05:36:07.790] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 1, 1 203s [2026-02-02 05:36:07.790] [RANK: 0] [info] Graph edges (local: 65536, non-local: 578) 203s [2026-02-02 05:36:07.790] [RANK: 0] [info] Compute graph partition using PT-SCOTCH 204s [2026-02-02 05:36:08.446] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 204s [2026-02-02 05:36:08.452] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 204s [2026-02-02 05:36:08.473] [RANK: 0] [info] Extract basic topology: 66784->66784 204s [2026-02-02 05:36:08.473] [RANK: 0] [info] Build local dual graphs, re-order cells, and compute process boundary vertices. 204s [2026-02-02 05:36:08.473] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 204s [2026-02-02 05:36:08.490] [RANK: 0] [info] GPS pseudo-diameter:(108) 1517-15382 204s [2026-02-02 05:36:08.491] [RANK: 0] [info] Create topology (generalised) 204s [2026-02-02 05:36:08.492] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 204s [2026-02-02 05:36:08.499] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 204s [2026-02-02 05:36:08.518] [RANK: 0] [info] Compute ghost indices 204s [2026-02-02 05:36:08.518] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 204s [2026-02-02 05:36:08.518] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 204s [2026-02-02 05:36:08.519] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 204s [2026-02-02 05:36:08.519] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 204s [2026-02-02 05:36:08.521] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 204s [2026-02-02 05:36:08.521] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 204s [2026-02-02 05:36:08.521] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 204s [2026-02-02 05:36:08.521] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 204s [2026-02-02 05:36:08.522] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 204s [2026-02-02 05:36:08.522] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 204s [2026-02-02 05:36:08.522] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 204s [2026-02-02 05:36:08.522] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 204s [2026-02-02 05:36:08.522] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 204s [2026-02-02 05:36:08.523] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 1, 0.5 204s [2026-02-02 05:36:08.523] [RANK: 0] [info] Create Geometry (multiple) 204s [2026-02-02 05:36:08.523] [RANK: 0] [info] Got 1 dof layouts 204s [2026-02-02 05:36:08.523] [RANK: 0] [info] Checking required entities per dimension 204s [2026-02-02 05:36:08.523] [RANK: 0] [info] Cell type: 0 dofmap: 16696x4 204s [2026-02-02 05:36:08.524] [RANK: 0] [info] Global index computation 204s [2026-02-02 05:36:08.524] [RANK: 0] [info] Got 1 index_maps 204s [2026-02-02 05:36:08.524] [RANK: 0] [info] Get global indices 204s [2026-02-02 05:36:08.524] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 204s [2026-02-02 05:36:08.524] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 204s [2026-02-02 05:36:08.524] [RANK: 0] [info] Calling compute_local_to_global 204s [2026-02-02 05:36:08.524] [RANK: 0] [info] xdofs.size = 66784 204s [2026-02-02 05:36:08.524] [RANK: 0] [info] dofmap sizes = 66784 204s [2026-02-02 05:36:08.524] [RANK: 0] [info] all_dofmaps.size = 66784 204s [2026-02-02 05:36:08.524] [RANK: 0] [info] nodes.size = 3446 204s [2026-02-02 05:36:08.525] [RANK: 0] [info] Creating geometry with 1 dofmaps 204s UnitCube (18x15x21) to be refined 0 times 204s [2026-02-02 05:36:08.525] [RANK: 0] [info] Computing mesh entities of dimension 2 204s [2026-02-02 05:36:08.530] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 204s [2026-02-02 05:36:08.531] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 204s [2026-02-02 05:36:08.538] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 204s [2026-02-02 05:36:08.538] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 204s [2026-02-02 05:36:08.538] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 204s [2026-02-02 05:36:08.538] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. 204s [2026-02-02 05:36:08.539] [RANK: 0] [info] Checking required entities per dimension 204s [2026-02-02 05:36:08.539] [RANK: 0] [info] Cell type: 0 dofmap: 16696x4 204s [2026-02-02 05:36:08.539] [RANK: 0] [info] Global index computation 204s [2026-02-02 05:36:08.540] [RANK: 0] [info] Got 1 index_maps 204s [2026-02-02 05:36:08.540] [RANK: 0] [info] Get global indices 204s [2026-02-02 05:36:08.540] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 204s [2026-02-02 05:36:08.540] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 204s [2026-02-02 05:36:08.540] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) 204s [2026-02-02 05:36:08.546] [RANK: 0] [info] Column ghost size increased from 158 to 414 204s ---------------------------------------------------------------- 204s Test problem summary 204s dolfinx version: 0.10.0 204s dolfinx hash: ubuntu 204s ufl hash: 58f3dc30e5e56245b795ae796fe6a103649e8345 204s petsc version: PETSc Release Version 3.24.3, Jan 01, 2026 204s Problem type: elasticity 204s Scaling type: weak 204s Num processes: 2 204s Num cells: 34020 (34 thousand) 204s Total degrees of freedom: 20064 (20.1 thousand) 204s Average degrees of freedom per process: 10032 204s ---------------------------------------------------------------- 204s [2026-02-02 05:36:08.584] [RANK: 0] [info] PETSc Krylov solver starting to solve system. 204s KSP Object: 2 MPI processes 204s type: cg 204s maximum iterations=10000, initial guess is zero 204s tolerances: relative=1e-08, absolute=1e-50, divergence=10000. 204s left preconditioning 204s using PRECONDITIONED norm type for convergence test 204s PC Object: 2 MPI processes 204s type: gamg 204s type is MULTIPLICATIVE, levels=3 cycles=v 204s Cycles per PCApply=1 204s Using externally compute Galerkin coarse grid matrices 204s GAMG specific options 204s Threshold for dropping small values in graph on each level = -1. -1. -1. 204s Threshold scaling factor for each level not specified = 1. 204s AGG specific options 204s Number of levels of aggressive coarsening 1 204s Square graph aggressive coarsening 204s MatCoarsen Object: 2 MPI processes 204s type: misk 204s Number smoothing steps to construct prolongation 1 204s Complexity: grid = 1.09958 operator = 1.39015 204s Per-level complexity: op = operator, int = interpolation 204s #equations | #active PEs | avg nnz/row op | avg nnz/row int 204s 180 1 154 0 204s 1818 2 163 35 204s 20064 2 42 21 204s Coarse grid solver -- level 0 ------------------------------- 204s KSP Object: (mg_coarse_) 2 MPI processes 204s type: preonly 204s maximum iterations=10000, initial guess is zero 204s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 204s left preconditioning 204s using NONE norm type for convergence test 204s PC Object: (mg_coarse_) 2 MPI processes 204s type: bjacobi 204s number of blocks = 2 204s Local solver information for first block is in the following KSP and PC objects on rank 0: 204s Use -mg_coarse_ksp_view ::ascii_info_detail to display information for all blocks 204s KSP Object: (mg_coarse_sub_) 1 MPI process 204s type: preonly 204s maximum iterations=1, initial guess is zero 204s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 204s left preconditioning 204s using NONE norm type for convergence test 204s PC Object: (mg_coarse_sub_) 1 MPI process 204s type: lu 204s out-of-place factorization 204s tolerance for zero pivot 2.22045e-14 204s using diagonal shift on blocks to prevent zero pivot [INBLOCKS] 204s matrix ordering: nd 204s factor fill ratio given 5., needed 1.08877 204s Factored matrix follows: 204s Mat Object: (mg_coarse_sub_) 1 MPI process 204s type: seqaij 204s rows=180, cols=180, bs=6 204s package used to perform factorization: petsc 204s total: nonzeros=30024, allocated nonzeros=30024 204s using I-node routines: found 40 nodes, limit used is 5 204s linear system matrix = precond matrix: 204s Mat Object: (mg_coarse_sub_) 1 MPI process 204s type: seqaij 204s rows=180, cols=180, bs=6 204s total: nonzeros=27576, allocated nonzeros=27576 204s total number of mallocs used during MatSetValues calls=0 204s using I-node routines: found 56 nodes, limit used is 5 204s linear system matrix = precond matrix: 204s Mat Object: 2 MPI processes 204s type: mpiaij 204s rows=180, cols=180, bs=6 204s total: nonzeros=27576, allocated nonzeros=27576 204s total number of mallocs used during MatSetValues calls=0 204s using scalable MatPtAP() implementation 204s using I-node (on process 0) routines: found 56 nodes, limit used is 5 204s Down solver (pre-smoother) on level 1 ------------------------------- 204s KSP Object: (mg_levels_1_) 2 MPI processes 204s type: chebyshev 204s Chebyshev polynomial of first kind 204s eigenvalue targets used: min 0.27638, max 3.04018 204s eigenvalues provided (min 0.0711717, max 2.7638) with transform: [0. 0.1; 0. 1.1] 204s maximum iterations=2, nonzero initial guess 204s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 204s left preconditioning 204s using NONE norm type for convergence test 204s PC Object: (mg_levels_1_) 2 MPI processes 204s type: jacobi 204s type DIAGONAL 204s linear system matrix = precond matrix: 204s Mat Object: 2 MPI processes 204s type: mpiaij 204s rows=1818, cols=1818, bs=6 204s total: nonzeros=295308, allocated nonzeros=295308 204s total number of mallocs used during MatSetValues calls=0 204s using scalable MatPtAP() implementation 204s using I-node (on process 0) routines: found 272 nodes, limit used is 5 204s Up solver (post-smoother) same as down solver (pre-smoother) 204s Down solver (pre-smoother) on level 2 ------------------------------- 204s KSP Object: (mg_levels_2_) 2 MPI processes 204s type: chebyshev 204s Chebyshev polynomial of first kind 204s eigenvalue targets used: min 0.26738, max 2.94118 204s eigenvalues provided (min 0.0722054, max 2.6738) with transform: [0. 0.1; 0. 1.1] 204s maximum iterations=2, nonzero initial guess 204s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 204s left preconditioning 204s using NONE norm type for convergence test 204s PC Object: (mg_levels_2_) 2 MPI processes 204s type: jacobi 204s type DIAGONAL 204s linear system matrix = precond matrix: 204s Mat Object: 2 MPI processes 204s type: mpiaij 204s rows=20064, cols=20064, bs=3 204s total: nonzeros=827586, allocated nonzeros=827586 204s total number of mallocs used during MatSetValues calls=0 204s has attached near null space 204s using I-node (on process 0) routines: found 3288 nodes, limit used is 5 204s Up solver (post-smoother) same as down solver (pre-smoother) 204s linear system matrix = precond matrix: 204s Mat Object: 2 MPI processes 204s type: mpiaij 204s rows=20064, cols=20064, bs=3 204s total: nonzeros=827586, allocated nonzeros=827586 204s total number of mallocs used during MatSetValues calls=0 204s has attached near null space 204s using I-node (on process 0) routines: found 3288 nodes, limit used is 5 204s 204s [MPI_MAX] Summary of timings (s) | reps avg tot 204s ------------------------------------------------------------------------------------------------------- 204s Build BoxMesh (tetrahedra) | 1 0.744454 0.744454 204s Build dofmap data | 2 0.001307 0.002614 204s Compute connectivity 2-0 | 1 0.000158 0.000158 204s Compute dof reordering map | 2 0.000062 0.000125 204s Compute entities of dim = 2 | 1 0.013517 0.013517 204s Compute graph partition (SCOTCH) | 1 0.655056 0.655056 204s Compute local part of mesh dual graph (mixed) | 2 0.011950 0.023901 204s Compute local-to-local map | 1 0.000235 0.000235 204s Compute non-local part of mesh dual graph | 1 0.000898 0.000898 204s Compute-local-to-global links for global/local adjacency list | 1 0.000187 0.000187 204s Distribute fixed-degree adjacency list to destination ranks | 1 0.027103 0.027103 204s Distribute row-wise data (scalable) | 1 0.000491 0.000491 204s GPS: create_level_structure | 2 0.000103 0.000309 204s Gibbs-Poole-Stockmeyer ordering | 1 0.002793 0.002793 204s Init MPI | 1 0.011530 0.011530 204s Init PETSc | 1 0.000348 0.000348 204s Init dofmap from element dofmap | 2 0.000793 0.001587 204s Init logging | 1 0.000003 0.000003 204s PETSc Krylov solver | 1 0.206089 0.206089 204s SparsityPattern::finalize | 1 0.002229 0.002229 204s Topology: create | 1 0.035674 0.035674 204s Topology: determine shared index ownership | 1 0.027075 0.027075 204s Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.002519 0.002519 204s ZZZ Assemble matrix | 1 0.032760 0.032760 204s ZZZ Assemble vector | 1 0.001685 0.001685 204s ZZZ Create Mesh | 1 0.744563 0.744563 204s ZZZ Create RHS function | 1 0.002688 0.002688 204s ZZZ Create boundary conditions | 1 0.000336 0.000336 204s ZZZ Create facets and facet->cell connectivity | 1 0.013696 0.013696 204s ZZZ Create forms | 1 0.000031 0.000031 204s ZZZ Create near-nullspace | 1 0.002142 0.002142 204s ZZZ FunctionSpace | 1 0.001424 0.001424 204s ZZZ Solve | 1 0.207418 0.207418 204s *** Number of Krylov iterations: 19 204s *** Solution norm: 3.00268e-05 204s **************************************************************************************************************************************************************** 204s *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** 204s **************************************************************************************************************************************************************** 204s 204s ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ 204s 204s ./dolfinx-scaling-test on a named autopkgtest with 2 processes, by ubuntu on Mon Feb 2 05:36:08 2026 204s Using PETSc Release Version 3.24.3, Jan 01, 2026 204s 204s Max Max/Min Avg Total 204s Time (sec): 1.011e+00 1.000 1.011e+00 204s Objects: 0.000e+00 0.000 0.000e+00 204s Flops: 2.181e+08 1.054 2.125e+08 4.250e+08 204s Flops/sec: 2.158e+08 1.054 2.102e+08 4.204e+08 204s MPI Msg Count: 4.015e+02 1.008 4.000e+02 8.000e+02 204s MPI Msg Len (bytes): 3.769e+06 1.001 9.419e+03 7.535e+06 204s MPI Reductions: 4.610e+02 1.000 204s 204s Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) 204s e.g., VecAXPY() for real vectors of length N --> 2N flops 204s and VecAXPY() for complex vectors of length N --> 8N flops 204s 204s Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- 204s Avg %Total Avg %Total Count %Total Avg %Total Count %Total 204s 0: Main Stage: 1.0109e+00 100.0% 4.2502e+08 100.0% 8.000e+02 100.0% 9.419e+03 100.0% 4.430e+02 96.1% 204s 204s ------------------------------------------------------------------------------------------------------------------------ 204s See the 'Profiling' chapter of the users' manual for details on interpreting output. 204s Phase summary info: 204s Count: number of times phase was executed 204s Time and Flop: Max - maximum over all processes 204s Ratio - ratio of maximum to minimum over all processes 204s Mess: number of messages sent 204s AvgLen: average message length (bytes) 204s Reduct: number of global reductions 204s Global: entire computation 204s Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). 204s %T - percent time in this phase %F - percent flop in this phase 204s %M - percent messages in this phase %L - percent message lengths in this phase 204s %R - percent reductions in this phase 204s Total Mflop/s: 1e-6 * (sum of flop over all processes)/(max time over all processes) 204s ------------------------------------------------------------------------------------------------------------------------ 204s Event Count Time (sec) Flop --- Global --- --- Stage ---- Total 204s Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s 204s ------------------------------------------------------------------------------------------------------------------------ 204s 204s --- Event Stage 0: Main Stage 204s 204s BuildTwoSided 109 1.0 8.9717e-03 35.9 0.00e+00 0.0 5.9e+01 4.0e+00 1.1e+02 0 0 7 0 24 0 0 7 0 25 0 204s BuildTwoSidedF 83 1.0 8.9606e-03 39.4 0.00e+00 0.0 3.2e+01 7.2e+04 8.3e+01 0 0 4 31 18 0 0 4 31 19 0 204s MatMult 199 1.0 2.1288e-02 1.0 1.21e+08 1.1 4.0e+02 6.8e+03 0.0e+00 2 54 50 36 0 2 54 50 36 0 10861 204s MatMultAdd 40 1.0 1.7827e-03 1.1 9.82e+06 1.0 6.0e+01 1.8e+03 0.0e+00 0 5 8 1 0 0 5 8 1 0 10815 204s MatMultTranspose 40 1.0 2.9029e-03 1.0 9.82e+06 1.0 6.0e+01 1.8e+03 0.0e+00 0 5 8 1 0 0 5 8 1 0 6647 204s MatSolve 20 0.0 2.4715e-04 0.0 1.20e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 4845 204s MatLUFactorSym 1 1.0 6.8720e-04 186.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 204s MatLUFactorNum 1 1.0 7.6854e-04 947.6 3.22e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 4188 204s MatScale 6 1.0 2.3010e-04 1.0 5.94e+05 1.0 4.0e+00 1.9e+03 0.0e+00 0 0 0 0 0 0 0 0 0 0 5060 204s MatResidual 40 1.0 4.0252e-03 1.0 2.35e+07 1.1 8.0e+01 6.5e+03 0.0e+00 0 11 10 7 0 0 11 10 7 0 11159 204s MatAssemblyBegin 45 1.0 1.3382e-02 2.8 0.00e+00 0.0 3.2e+01 7.2e+04 2.3e+01 1 0 4 31 5 1 0 4 31 5 0 204s MatAssemblyEnd 45 1.0 8.9970e-03 1.0 4.41e+04 1.0 5.8e+01 6.0e+02 9.0e+01 1 0 7 0 20 1 0 7 0 20 10 204s MatGetRowIJ 1 0.0 1.2148e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 204s MatCreateSubMat 1 1.0 1.1329e-03 1.0 0.00e+00 0.0 2.0e+00 3.1e+02 1.5e+01 0 0 0 0 3 0 0 0 0 3 0 204s MatGetOrdering 1 0.0 3.2930e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 204s MatCoarsen 2 1.0 4.0014e-04 1.0 0.00e+00 0.0 3.7e+01 8.8e+02 3.6e+01 0 0 5 0 8 0 0 5 0 8 0 204s MatZeroEntries 2 1.0 3.6625e-05 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 204s MatView 6 1.5 1.5138e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 204s MatAXPY 4 1.0 2.8932e-03 1.0 1.19e+05 1.1 8.0e+00 4.8e+02 1.4e+01 0 0 1 0 3 0 0 1 0 3 80 204s MatTranspose 9 1.0 2.1016e-03 1.0 0.00e+00 0.0 3.5e+01 2.3e+03 2.7e+01 0 0 4 1 6 0 0 4 1 6 0 204s MatMatMultSym 6 1.0 1.8894e-02 1.0 0.00e+00 0.0 2.0e+01 1.2e+04 2.0e+01 2 0 2 3 4 2 0 2 3 5 0 204s MatMatMultNum 2 1.0 4.3431e-03 1.0 7.06e+06 1.1 4.0e+00 3.9e+04 2.0e+00 0 3 0 2 0 0 3 0 2 0 3103 204s MatPtAPSymbolic 2 1.0 7.9384e-02 1.0 0.00e+00 0.0 2.1e+01 6.7e+04 1.4e+01 8 0 3 19 3 8 0 3 19 3 0 204s MatPtAPNumeric 2 1.0 5.6154e-02 1.0 5.75e+07 1.1 1.0e+01 1.3e+05 1.2e+01 6 26 1 17 3 6 26 1 17 3 1984 204s MatTrnMatMultSym 1 1.0 9.6137e-03 1.0 0.00e+00 0.0 1.4e+01 3.6e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 204s MatGetLocalMat 7 1.0 1.3199e-03 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 204s MatGetBrAoCol 6 1.0 7.1765e-04 1.0 0.00e+00 0.0 2.8e+01 5.3e+04 0.0e+00 0 0 4 20 0 0 0 4 20 0 0 204s MatCreateGraph 2 1.0 5.7631e-03 1.0 1.54e+05 1.1 4.8e+01 2.0e+03 5.0e+01 1 0 6 1 11 1 0 6 1 11 52 204s VecMDot 20 1.0 5.4544e-04 1.0 1.23e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 5 4413 204s VecTDot 40 1.0 3.7713e-04 1.0 8.16e+05 1.0 0.0e+00 0.0e+00 4.0e+01 0 0 0 0 9 0 0 0 0 9 4256 204s VecNorm 42 1.0 4.2100e-04 1.3 6.54e+05 1.0 0.0e+00 0.0e+00 4.2e+01 0 0 0 0 9 0 0 0 0 9 3050 204s VecScale 22 1.0 2.0974e-05 1.0 1.23e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 11476 204s VecCopy 124 1.0 1.2873e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 204s VecSet 141 1.0 4.2542e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 204s VecAXPY 40 1.0 8.4597e-05 1.0 7.98e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 18542 204s VecAYPX 258 1.0 5.2402e-04 1.0 2.16e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 8060 204s VecAXPBYCZ 80 1.0 2.5653e-04 1.0 2.24e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 17060 204s VecMAXPY 22 1.0 1.5359e-04 1.0 1.46e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 18521 204s VecAssemblyBegin 61 1.0 1.4807e-04 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+01 0 0 0 0 13 0 0 0 0 14 0 204s VecAssemblyEnd 61 1.0 1.6527e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 204s VecPointwiseMult 182 1.0 3.8590e-04 1.1 1.02e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 5160 204s VecReciprocal 8 1.0 5.3641e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 204s VecScatterBegin 343 1.0 6.5610e-04 1.1 0.00e+00 0.0 6.1e+02 5.3e+03 0.0e+00 0 0 76 43 0 0 0 76 43 0 0 204s VecScatterEnd 343 1.0 2.7766e-03 2.0 7.32e+03 1.2 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 5 204s VecNormalize 22 1.0 2.5502e-04 1.5 3.70e+05 1.0 0.0e+00 0.0e+00 2.2e+01 0 0 0 0 5 0 0 0 0 5 2831 204s SFSetGraph 26 1.0 4.1152e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 204s SFSetUp 26 1.0 2.0788e-04 1.0 0.00e+00 0.0 8.6e+01 5.8e+02 2.6e+01 0 0 11 1 6 0 0 11 1 6 0 204s SFBcastBegin 8 1.0 1.1677e-05 1.0 0.00e+00 0.0 1.6e+01 1.6e+03 0.0e+00 0 0 2 0 0 0 0 2 0 0 0 204s SFBcastEnd 8 1.0 1.5764e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 204s SFReduceBegin 3 1.0 1.8818e-05 1.0 0.00e+00 0.0 5.0e+00 7.7e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 204s SFReduceEnd 3 1.0 7.9820e-06 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 204s SFPack 354 1.0 3.4998e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 204s SFUnpack 354 1.0 3.0438e-05 1.0 7.32e+03 1.2 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 434 204s KSPSetUp 1 1.0 1.3451e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 204s KSPSolve 1 1.0 2.7858e-02 1.0 1.36e+08 1.0 4.8e+02 5.6e+03 8.0e+01 3 63 60 35 17 3 63 60 35 18 9558 204s KSPGMRESOrthog 20 1.0 6.7813e-04 1.0 2.46e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 5 7099 204s PCSetUp_GAMG+ 1 1.0 1.7604e-01 1.0 8.01e+07 1.1 3.0e+02 1.5e+04 3.1e+02 17 36 38 58 67 17 36 38 58 70 879 204s PCGAMGCreateG 2 1.0 5.7648e-03 1.0 1.54e+05 1.1 4.8e+01 2.0e+03 5.0e+01 1 0 6 1 11 1 0 6 1 11 52 204s GAMG Coarsen 4 1.0 1.0679e-02 1.0 0.00e+00 0.0 6.1e+01 9.7e+03 5.3e+01 1 0 8 8 11 1 0 8 8 12 0 204s GAMG MIS/Agg 2 1.0 1.0051e-02 1.0 0.00e+00 0.0 5.1e+01 1.1e+04 4.9e+01 1 0 6 7 11 1 0 6 7 11 0 204s PCGAMGProl 2 1.0 3.6279e-03 1.0 0.00e+00 0.0 8.7e+01 3.7e+03 7.6e+01 0 0 11 4 16 0 0 11 4 17 0 204s GAMG Prol-col 2 1.0 1.4031e-03 1.0 0.00e+00 0.0 7.5e+01 3.0e+03 5.6e+01 0 0 9 3 12 0 0 9 3 13 0 204s GAMG Prol-lift 2 1.0 2.1169e-03 1.0 0.00e+00 0.0 1.2e+01 8.3e+03 1.2e+01 0 0 2 1 3 0 0 2 1 3 0 204s PCGAMGOptProl 2 1.0 1.8877e-02 1.0 2.25e+07 1.1 6.4e+01 1.0e+04 6.6e+01 2 10 8 9 14 2 10 8 9 15 2281 204s GAMG smooth 2 1.0 1.4692e-02 1.0 7.62e+06 1.1 2.4e+01 1.7e+04 2.4e+01 1 3 3 5 5 1 3 3 5 5 992 204s PCGAMGCreateL 2 1.0 1.3663e-01 1.0 5.75e+07 1.1 4.2e+01 6.5e+04 6.0e+01 14 26 5 36 13 14 26 5 36 14 815 204s GAMG PtAP 2 1.0 1.3539e-01 1.0 5.75e+07 1.1 3.1e+01 8.7e+04 2.6e+01 13 26 4 36 6 13 26 4 36 6 823 204s GAMG Reduce 1 1.0 4.4176e-02 1.0 1.85e+07 1.1 2.2e+01 4.0e+04 4.7e+01 4 8 3 12 10 4 8 3 12 11 790 204s PCGAMG Squ l00 1 1.0 9.6145e-03 1.0 0.00e+00 0.0 1.4e+01 3.6e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 204s PCGAMG Gal l00 1 1.0 9.2581e-02 1.0 3.90e+07 1.0 2.0e+01 9.2e+04 1.3e+01 9 18 2 25 3 9 18 2 25 3 827 204s PCGAMG Opt l00 1 1.0 9.9003e-03 1.0 5.05e+06 1.0 1.2e+01 2.6e+04 1.1e+01 1 2 2 4 2 1 2 2 4 2 1003 204s PCGAMG Gal l01 1 1.0 4.2936e-02 1.0 1.85e+07 1.1 1.1e+01 7.8e+04 1.3e+01 4 8 1 11 3 4 8 1 11 3 813 204s PCGAMG Opt l01 1 1.0 3.4193e-03 1.0 2.01e+06 1.3 1.2e+01 7.9e+03 1.1e+01 0 1 2 1 2 0 1 2 1 2 1036 204s PCSetUp 1 1.0 1.7604e-01 1.0 8.01e+07 1.1 3.0e+02 1.5e+04 3.1e+02 17 36 38 58 67 17 36 38 58 70 879 204s PCSetUpOnBlocks 20 1.0 1.5307e-03 31.7 3.22e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2103 204s PCApply 20 1.0 2.4578e-02 1.0 1.18e+08 1.0 4.4e+02 5.2e+03 2.0e+01 2 54 55 30 4 2 54 55 30 5 9380 204s PCApplyOnBlocks 20 1.0 2.6195e-04 20.9 1.20e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 4571 204s ------------------------------------------------------------------------------------------------------------------------ 204s 204s Object Type Creations Destructions. Reports information only for process 0. 204s 204s --- Event Stage 0: Main Stage 204s 204s Container 11 11 204s Matrix 82 82 204s Matrix Coarsen 2 2 204s Matrix Null Space 1 1 204s Index Set 60 60 204s IS L to G Mapping 5 5 204s Vector 179 179 204s Star Forest Graph 34 34 204s Krylov Solver 7 7 204s Preconditioner 7 7 204s Viewer 2 2 204s PetscRandom 2 2 204s Distributed Mesh 4 4 204s Discrete System 4 4 204s Weak Form 4 4 204s ======================================================================================================================== 204s Average time to get PetscTime(): 3.2e-08 204s Average time for MPI_Barrier(): 7.53e-07 204s Average time for zero size MPI_Send(): 6.81e-07 204s #PETSc Option Table entries: 204s --ndofs 10000 # (source: command line) 204s --problem_type elasticity # (source: command line) 204s --scaling_type weak # (source: command line) 204s -ksp_rtol 1.0e-8 # (source: command line) 204s -ksp_type cg # (source: command line) 204s -ksp_view # (source: command line) 204s -log_view # (source: command line) 204s -matptap_via scalable # (source: command line) 204s -mg_levels_esteig_ksp_type cg # (source: command line) 204s -mg_levels_ksp_type chebyshev # (source: command line) 204s -mg_levels_pc_type jacobi # (source: command line) 204s -options_left # (source: command line) 204s -pc_gamg_coarse_eq_limit 1000 # (source: command line) 204s -pc_type gamg # (source: command line) 204s #End of PETSc Option Table entries 204s Compiled without FORTRAN kernels 204s Compiled with full precision matrices (default) 204s sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 204s Configure options: --build=x86_64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --with-library-name-suffix=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi " --CXX_LINKER_FLAGS="-Wl,--no-as-needed -Wl,-z,defs" --CC_LINKER_FLAGS=-Wl,-z,defs --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real --PETSC_ARCH=x86_64-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" CXXFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" FCFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=3" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,--package-metadata=%7B%22type%22:%22deb%22%2C%22os%22:%22ubuntu%22%2C%22name%22:%22petsc%22%2C%22version%22:%223.24.3+dfsg1-1ubuntu1%22%2C%22architecture%22:%22amd64%22%7D -flto=auto -ffat-lto-objects -Wl,-z,relro -fPIC" MAKEFLAGS= 204s ----------------------------------------- 204s Libraries compiled on 2026-01-26 06:54:57 on reproducible 204s Machine characteristics: Linux-6.8.0-90-generic-x86_64-with-glibc2.42 204s Using PETSc directory: /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real 204s Using PETSc arch: 204s ----------------------------------------- 204s 204s Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -Wdate-time -D_FORTIFY_SOURCE=3 204s Using Fortran compiler: mpif90 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=3 204s ----------------------------------------- 204s 204s Using include paths: -I/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu-dist -I/usr/include/superlu -I/usr/include/scotch -I/usr/include/hdf5/openmpi 204s ----------------------------------------- 204s 204s Using C linker: mpicc 204s Using Fortran linker: mpif90 204s Using libraries: -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/gcc/x86_64-linux-gnu/15 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -lfftw3 -lfftw3_mpi -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu_dist -lsuperlu -llapack -lblas -lptesmumps -lptscotch -lscotch -lptscotcherr -lhdf5 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lm -lOpenCL -lyaml -lX11 -lstdc++ -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ 204s ----------------------------------------- 204s 204s #PETSc Option Table entries: 204s --ndofs 10000 # (source: command line) 204s --problem_type elasticity # (source: command line) 204s --scaling_type weak # (source: command line) 204s -ksp_rtol 1.0e-8 # (source: command line) 204s -ksp_type cg # (source: command line) 204s -ksp_view # (source: command line) 204s -log_view # (source: command line) 204s -matptap_via scalable # (source: command line) 204s -mg_levels_esteig_ksp_type cg # (source: command line) 204s -mg_levels_ksp_type chebyshev # (source: command line) 204s -mg_levels_pc_type jacobi # (source: command line) 204s -options_left # (source: command line) 204s -pc_gamg_coarse_eq_limit 1000 # (source: command line) 204s -pc_type gamg # (source: command line) 204s #End of PETSc Option Table entries 204s WARNING! There are options you set that were not used! 204s WARNING! could be spelling mistake, etc! 204s There are 4 unused database options. They are: 204s Option left: name:--ndofs value: 10000 source: command line 204s Option left: name:--problem_type value: elasticity source: command line 204s Option left: name:--scaling_type value: weak source: command line 204s Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line 204s ==== elasticity strong scaling (2 processes with ndofs=20000) ==== 205s [2026-02-02 05:36:09.031] [RANK: 0] [info] Using partitioner with cell data (1 cell types) 205s [2026-02-02 05:36:09.031] [RANK: 0] [info] Compute partition of cells across ranks 205s [2026-02-02 05:36:09.031] [RANK: 0] [info] Building mesh dual graph 205s [2026-02-02 05:36:09.031] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 205s [2026-02-02 05:36:09.039] [RANK: 0] [info] Build nonlocal part of mesh dual graph 205s [2026-02-02 05:36:09.039] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 205s [2026-02-02 05:36:09.039] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 205s [2026-02-02 05:36:09.039] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 1, 1 205s [2026-02-02 05:36:09.040] [RANK: 0] [info] Graph edges (local: 65536, non-local: 578) 205s [2026-02-02 05:36:09.040] [RANK: 0] [info] Compute graph partition using PT-SCOTCH 205s [2026-02-02 05:36:09.700] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 205s [2026-02-02 05:36:09.706] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 205s [2026-02-02 05:36:09.728] [RANK: 0] [info] Extract basic topology: 68772->68772 205s [2026-02-02 05:36:09.728] [RANK: 0] [info] Build local dual graphs, re-order cells, and compute process boundary vertices. 205s [2026-02-02 05:36:09.728] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 205s [2026-02-02 05:36:09.744] [RANK: 0] [info] GPS pseudo-diameter:(108) 1742-15676 205s [2026-02-02 05:36:09.745] [RANK: 0] [info] Create topology (generalised) 205s [2026-02-02 05:36:09.747] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 205s [2026-02-02 05:36:09.754] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 205s [2026-02-02 05:36:09.791] [RANK: 0] [info] Compute ghost indices 205s [2026-02-02 05:36:09.791] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 205s [2026-02-02 05:36:09.794] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 205s [2026-02-02 05:36:09.801] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 205s [2026-02-02 05:36:09.801] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 205s [2026-02-02 05:36:09.804] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 205s [2026-02-02 05:36:09.804] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 205s [2026-02-02 05:36:09.804] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 205s [2026-02-02 05:36:09.804] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 205s [2026-02-02 05:36:09.805] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 205s [2026-02-02 05:36:09.805] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 205s [2026-02-02 05:36:09.805] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 205s [2026-02-02 05:36:09.805] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 205s [2026-02-02 05:36:09.805] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 205s [2026-02-02 05:36:09.805] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 1, 0.5 205s [2026-02-02 05:36:09.805] [RANK: 0] [info] Create Geometry (multiple) 205s [2026-02-02 05:36:09.805] [RANK: 0] [info] Got 1 dof layouts 205s [2026-02-02 05:36:09.805] [RANK: 0] [info] Checking required entities per dimension 205s [2026-02-02 05:36:09.805] [RANK: 0] [info] Cell type: 0 dofmap: 17193x4 205s [2026-02-02 05:36:09.806] [RANK: 0] [info] Global index computation 205s [2026-02-02 05:36:09.806] [RANK: 0] [info] Got 1 index_maps 205s [2026-02-02 05:36:09.806] [RANK: 0] [info] Get global indices 205s [2026-02-02 05:36:09.806] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 205s [2026-02-02 05:36:09.806] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 205s [2026-02-02 05:36:09.806] [RANK: 0] [info] Calling compute_local_to_global 205s [2026-02-02 05:36:09.806] [RANK: 0] [info] xdofs.size = 68772 205s [2026-02-02 05:36:09.806] [RANK: 0] [info] dofmap sizes = 68772 205s [2026-02-02 05:36:09.806] [RANK: 0] [info] all_dofmaps.size = 68772 205s [2026-02-02 05:36:09.806] [RANK: 0] [info] nodes.size = 3524 205s [2026-02-02 05:36:09.807] [RANK: 0] [info] Creating geometry with 1 dofmaps 205s UnitCube (18x15x21) to be refined 0 times 205s [2026-02-02 05:36:09.807] [RANK: 0] [info] Computing mesh entities of dimension 2 205s [2026-02-02 05:36:09.813] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 205s [2026-02-02 05:36:09.813] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 205s [2026-02-02 05:36:09.820] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 205s [2026-02-02 05:36:09.820] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 205s [2026-02-02 05:36:09.820] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 205s [2026-02-02 05:36:09.820] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. 205s [2026-02-02 05:36:09.820] [RANK: 0] [info] Checking required entities per dimension 205s [2026-02-02 05:36:09.820] [RANK: 0] [info] Cell type: 0 dofmap: 17193x4 205s [2026-02-02 05:36:09.821] [RANK: 0] [info] Global index computation 205s [2026-02-02 05:36:09.821] [RANK: 0] [info] Got 1 index_maps 205s [2026-02-02 05:36:09.821] [RANK: 0] [info] Get global indices 205s [2026-02-02 05:36:09.821] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 205s [2026-02-02 05:36:09.821] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 205s [2026-02-02 05:36:09.822] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) 205s [2026-02-02 05:36:09.827] [RANK: 0] [info] Column ghost size increased from 157 to 404 206s ---------------------------------------------------------------- 206s Test problem summary 206s dolfinx version: 0.10.0 206s dolfinx hash: ubuntu 206s ufl hash: 58f3dc30e5e56245b795ae796fe6a103649e8345 206s petsc version: PETSc Release Version 3.24.3, Jan 01, 2026 206s Problem type: elasticity 206s Scaling type: strong 206s Num processes: 2 206s Num cells: 34020 (34 thousand) 206s Total degrees of freedom: 20064 (20.1 thousand) 206s Average degrees of freedom per process: 10032 206s ---------------------------------------------------------------- 206s [2026-02-02 05:36:09.863] [RANK: 0] [info] PETSc Krylov solver starting to solve system. 206s KSP Object: 2 MPI processes 206s type: cg 206s maximum iterations=10000, initial guess is zero 206s tolerances: relative=1e-08, absolute=1e-50, divergence=10000. 206s left preconditioning 206s using PRECONDITIONED norm type for convergence test 206s PC Object: 2 MPI processes 206s type: gamg 206s type is MULTIPLICATIVE, levels=3 cycles=v 206s Cycles per PCApply=1 206s Using externally compute Galerkin coarse grid matrices 206s GAMG specific options 206s Threshold for dropping small values in graph on each level = -1. -1. -1. 206s Threshold scaling factor for each level not specified = 1. 206s AGG specific options 206s Number of levels of aggressive coarsening 1 206s Square graph aggressive coarsening 206s MatCoarsen Object: 2 MPI processes 206s type: misk 206s Number smoothing steps to construct prolongation 1 206s Complexity: grid = 1.09659 operator = 1.36718 206s Per-level complexity: op = operator, int = interpolation 206s #equations | #active PEs | avg nnz/row op | avg nnz/row int 206s 174 1 148 0 206s 1764 2 158 36 206s 20064 2 42 21 206s Coarse grid solver -- level 0 ------------------------------- 206s KSP Object: (mg_coarse_) 2 MPI processes 206s type: preonly 206s maximum iterations=10000, initial guess is zero 206s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 206s left preconditioning 206s using NONE norm type for convergence test 206s PC Object: (mg_coarse_) 2 MPI processes 206s type: bjacobi 206s number of blocks = 2 206s Local solver information for first block is in the following KSP and PC objects on rank 0: 206s Use -mg_coarse_ksp_view ::ascii_info_detail to display information for all blocks 206s KSP Object: (mg_coarse_sub_) 1 MPI process 206s type: preonly 206s maximum iterations=1, initial guess is zero 206s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 206s left preconditioning 206s using NONE norm type for convergence test 206s PC Object: (mg_coarse_sub_) 1 MPI process 206s type: lu 206s out-of-place factorization 206s tolerance for zero pivot 2.22045e-14 206s using diagonal shift on blocks to prevent zero pivot [INBLOCKS] 206s matrix ordering: nd 206s factor fill ratio given 5., needed 1.05594 206s Factored matrix follows: 206s Mat Object: (mg_coarse_sub_) 1 MPI process 206s type: seqaij 206s rows=174, cols=174, bs=6 206s package used to perform factorization: petsc 206s total: nonzeros=27180, allocated nonzeros=27180 206s using I-node routines: found 46 nodes, limit used is 5 206s linear system matrix = precond matrix: 206s Mat Object: (mg_coarse_sub_) 1 MPI process 206s type: seqaij 206s rows=174, cols=174, bs=6 206s total: nonzeros=25740, allocated nonzeros=25740 206s total number of mallocs used during MatSetValues calls=0 206s using I-node routines: found 57 nodes, limit used is 5 206s linear system matrix = precond matrix: 206s Mat Object: 2 MPI processes 206s type: mpiaij 206s rows=174, cols=174, bs=6 206s total: nonzeros=25740, allocated nonzeros=25740 206s total number of mallocs used during MatSetValues calls=0 206s using scalable MatPtAP() implementation 206s using I-node (on process 0) routines: found 57 nodes, limit used is 5 206s Down solver (pre-smoother) on level 1 ------------------------------- 206s KSP Object: (mg_levels_1_) 2 MPI processes 206s type: chebyshev 206s Chebyshev polynomial of first kind 206s eigenvalue targets used: min 0.263907, max 2.90297 206s eigenvalues provided (min 0.02729, max 2.63907) with transform: [0. 0.1; 0. 1.1] 206s maximum iterations=2, nonzero initial guess 206s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 206s left preconditioning 206s using NONE norm type for convergence test 206s PC Object: (mg_levels_1_) 2 MPI processes 206s type: jacobi 206s type DIAGONAL 206s linear system matrix = precond matrix: 206s Mat Object: 2 MPI processes 206s type: mpiaij 206s rows=1764, cols=1764, bs=6 206s total: nonzeros=278136, allocated nonzeros=278136 206s total number of mallocs used during MatSetValues calls=0 206s using scalable MatPtAP() implementation 206s using I-node (on process 0) routines: found 274 nodes, limit used is 5 206s Up solver (post-smoother) same as down solver (pre-smoother) 206s Down solver (pre-smoother) on level 2 ------------------------------- 206s KSP Object: (mg_levels_2_) 2 MPI processes 206s type: chebyshev 206s Chebyshev polynomial of first kind 206s eigenvalue targets used: min 0.26766, max 2.94426 206s eigenvalues provided (min 0.0726069, max 2.6766) with transform: [0. 0.1; 0. 1.1] 206s maximum iterations=2, nonzero initial guess 206s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 206s left preconditioning 206s using NONE norm type for convergence test 206s PC Object: (mg_levels_2_) 2 MPI processes 206s type: jacobi 206s type DIAGONAL 206s linear system matrix = precond matrix: 206s Mat Object: 2 MPI processes 206s type: mpiaij 206s rows=20064, cols=20064, bs=3 206s total: nonzeros=827586, allocated nonzeros=827586 206s total number of mallocs used during MatSetValues calls=0 206s has attached near null space 206s using I-node (on process 0) routines: found 3367 nodes, limit used is 5 206s Up solver (post-smoother) same as down solver (pre-smoother) 206s linear system matrix = precond matrix: 206s Mat Object: 2 MPI processes 206s type: mpiaij 206s rows=20064, cols=20064, bs=3 206s total: nonzeros=827586, allocated nonzeros=827586 206s total number of mallocs used during MatSetValues calls=0 206s has attached near null space 206s using I-node (on process 0) routines: found 3367 nodes, limit used is 5 206s 206s [MPI_MAX] Summary of timings (s) | reps avg tot 206s ------------------------------------------------------------------------------------------------------- 206s Build BoxMesh (tetrahedra) | 1 0.776451 0.776451 206s Build dofmap data | 2 0.001027 0.002054 206s Compute connectivity 2-0 | 1 0.000176 0.000176 206s Compute dof reordering map | 2 0.000085 0.000170 206s Compute entities of dim = 2 | 1 0.013390 0.013390 206s Compute graph partition (SCOTCH) | 1 0.659435 0.659435 206s Compute local part of mesh dual graph (mixed) | 2 0.012141 0.024281 206s Compute local-to-local map | 1 0.000220 0.000220 206s Compute non-local part of mesh dual graph | 1 0.000708 0.000708 206s Compute-local-to-global links for global/local adjacency list | 1 0.000184 0.000184 206s Distribute fixed-degree adjacency list to destination ranks | 1 0.028074 0.028074 206s Distribute row-wise data (scalable) | 1 0.000460 0.000460 206s GPS: create_level_structure | 3 0.000769 0.002308 206s Gibbs-Poole-Stockmeyer ordering | 1 0.002847 0.002847 206s Init MPI | 1 0.011363 0.011363 206s Init PETSc | 1 0.000434 0.000434 206s Init dofmap from element dofmap | 2 0.000718 0.001436 206s Init logging | 1 0.000003 0.000003 206s PETSc Krylov solver | 1 0.198358 0.198358 206s SparsityPattern::finalize | 1 0.002260 0.002260 206s Topology: create | 1 0.061810 0.061810 206s Topology: determine shared index ownership | 1 0.041470 0.041470 206s Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.000518 0.000518 206s ZZZ Assemble matrix | 1 0.030996 0.030996 206s ZZZ Assemble vector | 1 0.001671 0.001671 206s ZZZ Create Mesh | 1 0.776500 0.776500 206s ZZZ Create RHS function | 1 0.002371 0.002371 206s ZZZ Create boundary conditions | 1 0.000299 0.000299 206s ZZZ Create facets and facet->cell connectivity | 1 0.013590 0.013590 206s ZZZ Create forms | 1 0.000027 0.000027 206s ZZZ Create near-nullspace | 1 0.002122 0.002122 206s ZZZ FunctionSpace | 1 0.001290 0.001290 206s ZZZ Solve | 1 0.199313 0.199313 206s *** Number of Krylov iterations: 19 206s *** Solution norm: 3.00268e-05 206s **************************************************************************************************************************************************************** 206s *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** 206s **************************************************************************************************************************************************************** 206s 206s ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ 206s 206s ./dolfinx-scaling-test on a named autopkgtest with 2 processes, by ubuntu on Mon Feb 2 05:36:10 2026 206s Using PETSc Release Version 3.24.3, Jan 01, 2026 206s 206s Max Max/Min Avg Total 206s Time (sec): 1.032e+00 1.000 1.032e+00 206s Objects: 0.000e+00 0.000 0.000e+00 206s Flops: 2.099e+08 1.008 2.091e+08 4.181e+08 206s Flops/sec: 2.034e+08 1.008 2.025e+08 4.051e+08 206s MPI Msg Count: 4.015e+02 1.008 4.000e+02 8.000e+02 206s MPI Msg Len (bytes): 3.630e+06 1.001 9.071e+03 7.257e+06 206s MPI Reductions: 4.610e+02 1.000 206s 206s Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) 206s e.g., VecAXPY() for real vectors of length N --> 2N flops 206s and VecAXPY() for complex vectors of length N --> 8N flops 206s 206s Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- 206s Avg %Total Avg %Total Count %Total Avg %Total Count %Total 206s 0: Main Stage: 1.0322e+00 100.0% 4.1811e+08 100.0% 8.000e+02 100.0% 9.071e+03 100.0% 4.430e+02 96.1% 206s 206s ------------------------------------------------------------------------------------------------------------------------ 206s See the 'Profiling' chapter of the users' manual for details on interpreting output. 206s Phase summary info: 206s Count: number of times phase was executed 206s Time and Flop: Max - maximum over all processes 206s Ratio - ratio of maximum to minimum over all processes 206s Mess: number of messages sent 206s AvgLen: average message length (bytes) 206s Reduct: number of global reductions 206s Global: entire computation 206s Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). 206s %T - percent time in this phase %F - percent flop in this phase 206s %M - percent messages in this phase %L - percent message lengths in this phase 206s %R - percent reductions in this phase 206s Total Mflop/s: 1e-6 * (sum of flop over all processes)/(max time over all processes) 206s ------------------------------------------------------------------------------------------------------------------------ 206s Event Count Time (sec) Flop --- Global --- --- Stage ---- Total 206s Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s 206s ------------------------------------------------------------------------------------------------------------------------ 206s 206s --- Event Stage 0: Main Stage 206s 206s BuildTwoSided 109 1.0 3.5563e-03 2.5 0.00e+00 0.0 5.9e+01 4.0e+00 1.1e+02 0 0 7 0 24 0 0 7 0 25 0 206s BuildTwoSidedF 83 1.0 3.5590e-03 2.5 0.00e+00 0.0 3.2e+01 6.8e+04 8.3e+01 0 0 4 30 18 0 0 4 30 19 0 206s MatMult 199 1.0 2.0616e-02 1.0 1.15e+08 1.0 4.0e+02 6.7e+03 0.0e+00 2 55 50 37 0 2 55 50 37 0 11066 206s MatMultAdd 40 1.0 1.7895e-03 1.1 9.65e+06 1.0 6.0e+01 1.6e+03 0.0e+00 0 5 8 1 0 0 5 8 1 0 10702 206s MatMultTranspose 40 1.0 2.8835e-03 1.0 9.66e+06 1.0 6.0e+01 1.6e+03 0.0e+00 0 5 8 1 0 0 5 8 1 0 6646 206s MatSolve 20 0.0 2.3064e-04 0.0 1.08e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 4699 206s MatLUFactorSym 1 1.0 7.3274e-04 205.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 206s MatLUFactorNum 1 1.0 6.3875e-04 618.9 2.68e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 4188 206s MatScale 6 1.0 2.2506e-04 1.0 5.82e+05 1.0 4.0e+00 1.9e+03 0.0e+00 0 0 0 0 0 0 0 0 0 0 5141 206s MatResidual 40 1.0 3.9229e-03 1.0 2.24e+07 1.0 8.0e+01 6.4e+03 0.0e+00 0 11 10 7 0 0 11 10 7 0 11275 206s MatAssemblyBegin 45 1.0 7.9218e-03 1.4 0.00e+00 0.0 3.2e+01 6.8e+04 2.3e+01 1 0 4 30 5 1 0 4 30 5 0 206s MatAssemblyEnd 45 1.0 8.3537e-03 1.0 4.12e+04 1.1 5.8e+01 5.9e+02 9.0e+01 1 0 7 0 20 1 0 7 0 20 9 206s MatGetRowIJ 1 0.0 1.1948e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 206s MatCreateSubMat 1 1.0 1.1337e-03 1.0 0.00e+00 0.0 2.0e+00 2.9e+02 1.5e+01 0 0 0 0 3 0 0 0 0 3 0 206s MatGetOrdering 1 0.0 3.4682e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 206s MatCoarsen 2 1.0 3.9992e-04 1.0 0.00e+00 0.0 3.7e+01 8.8e+02 3.6e+01 0 0 5 0 8 0 0 5 0 8 0 206s MatZeroEntries 2 1.0 2.7240e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 206s MatView 6 1.5 1.3452e-03 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 206s MatAXPY 4 1.0 2.8767e-03 1.0 1.15e+05 1.0 8.0e+00 4.7e+02 1.4e+01 0 0 1 0 3 0 0 1 0 3 80 206s MatTranspose 9 1.0 2.0674e-03 1.0 0.00e+00 0.0 3.5e+01 2.2e+03 2.7e+01 0 0 4 1 6 0 0 4 1 6 0 206s MatMatMultSym 6 1.0 1.8088e-02 1.0 0.00e+00 0.0 2.0e+01 1.2e+04 2.0e+01 2 0 2 3 4 2 0 2 3 5 0 206s MatMatMultNum 2 1.0 4.2354e-03 1.0 6.72e+06 1.0 4.0e+00 3.8e+04 2.0e+00 0 3 0 2 0 0 3 0 2 0 3133 206s MatPtAPSymbolic 2 1.0 7.5506e-02 1.0 0.00e+00 0.0 2.1e+01 6.4e+04 1.4e+01 7 0 3 18 3 7 0 3 18 3 0 206s MatPtAPNumeric 2 1.0 5.3328e-02 1.0 5.45e+07 1.0 1.0e+01 1.2e+05 1.2e+01 5 26 1 16 3 5 26 1 16 3 2039 206s MatTrnMatMultSym 1 1.0 9.6232e-03 1.0 0.00e+00 0.0 1.4e+01 3.5e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 206s MatGetLocalMat 7 1.0 9.5001e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 206s MatGetBrAoCol 6 1.0 7.5794e-04 1.0 0.00e+00 0.0 2.8e+01 5.1e+04 0.0e+00 0 0 4 20 0 0 0 4 20 0 0 206s MatCreateGraph 2 1.0 5.5609e-03 1.0 1.50e+05 1.0 4.8e+01 1.9e+03 5.0e+01 1 0 6 1 11 1 0 6 1 11 54 206s VecMDot 20 1.0 5.2960e-04 1.0 1.20e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 5 4533 206s VecTDot 40 1.0 3.6983e-04 1.0 8.08e+05 1.0 0.0e+00 0.0e+00 4.0e+01 0 0 0 0 9 0 0 0 0 9 4340 206s VecNorm 42 1.0 5.2795e-04 1.6 6.44e+05 1.0 0.0e+00 0.0e+00 4.2e+01 0 0 0 0 9 0 0 0 0 9 2430 206s VecScale 22 1.0 2.2914e-05 1.0 1.20e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 10479 206s VecCopy 124 1.0 1.2822e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 206s VecSet 141 1.0 4.2952e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 206s VecAXPY 40 1.0 1.0563e-04 1.0 7.90e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 14850 206s VecAYPX 258 1.0 5.0052e-04 1.0 2.11e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 8421 206s VecAXPBYCZ 80 1.0 2.5236e-04 1.0 2.18e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 17299 206s VecMAXPY 22 1.0 1.4221e-04 1.0 1.42e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 19955 206s VecAssemblyBegin 61 1.0 2.1674e-04 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+01 0 0 0 0 13 0 0 0 0 14 0 206s VecAssemblyEnd 61 1.0 1.6906e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 206s VecPointwiseMult 182 1.0 3.7124e-04 1.0 9.94e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 5351 206s VecReciprocal 8 1.0 5.3178e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 206s VecScatterBegin 343 1.0 6.2197e-04 1.0 0.00e+00 0.0 6.1e+02 5.2e+03 0.0e+00 0 0 76 44 0 0 0 76 44 0 0 206s VecScatterEnd 343 1.0 1.9602e-03 1.2 6.48e+03 1.1 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 6 206s VecNormalize 22 1.0 3.6694e-04 2.2 3.60e+05 1.0 0.0e+00 0.0e+00 2.2e+01 0 0 0 0 5 0 0 0 0 5 1963 206s SFSetGraph 26 1.0 4.9965e-05 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 206s SFSetUp 26 1.0 2.1001e-04 1.1 0.00e+00 0.0 8.6e+01 5.7e+02 2.6e+01 0 0 11 1 6 0 0 11 1 6 0 206s SFBcastBegin 8 1.0 1.1135e-05 1.0 0.00e+00 0.0 1.6e+01 1.6e+03 0.0e+00 0 0 2 0 0 0 0 2 0 0 0 206s SFBcastEnd 8 1.0 1.7093e-05 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 206s SFReduceBegin 3 1.0 1.8788e-05 1.0 0.00e+00 0.0 5.0e+00 7.6e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 206s SFReduceEnd 3 1.0 8.7930e-06 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 206s SFPack 354 1.0 3.4100e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 206s SFUnpack 354 1.0 3.5596e-05 1.2 6.48e+03 1.1 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 347 206s KSPSetUp 1 1.0 1.0486e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 206s KSPSolve 1 1.0 2.7249e-02 1.0 1.32e+08 1.0 4.8e+02 5.5e+03 8.0e+01 3 63 60 36 17 3 63 60 36 18 9636 206s KSPGMRESOrthog 20 1.0 6.5966e-04 1.0 2.40e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 5 7279 206s PCSetUp_GAMG+ 1 1.0 1.6875e-01 1.0 7.59e+07 1.0 3.0e+02 1.4e+04 3.1e+02 16 36 38 58 67 16 36 38 58 70 898 206s PCGAMGCreateG 2 1.0 5.5624e-03 1.0 1.50e+05 1.0 4.8e+01 1.9e+03 5.0e+01 1 0 6 1 11 1 0 6 1 11 54 206s GAMG Coarsen 4 1.0 1.0678e-02 1.0 0.00e+00 0.0 6.1e+01 9.5e+03 5.3e+01 1 0 8 8 11 1 0 8 8 12 0 206s GAMG MIS/Agg 2 1.0 1.0062e-02 1.0 0.00e+00 0.0 5.1e+01 1.0e+04 4.9e+01 1 0 6 7 11 1 0 6 7 11 0 206s PCGAMGProl 2 1.0 3.5941e-03 1.0 0.00e+00 0.0 8.7e+01 3.8e+03 7.6e+01 0 0 11 5 16 0 0 11 5 17 0 206s GAMG Prol-col 2 1.0 1.5091e-03 1.0 0.00e+00 0.0 7.5e+01 3.0e+03 5.6e+01 0 0 9 3 12 0 0 9 3 13 0 206s GAMG Prol-lift 2 1.0 1.9705e-03 1.0 0.00e+00 0.0 1.2e+01 8.3e+03 1.2e+01 0 0 2 1 3 0 0 2 1 3 0 206s PCGAMGOptProl 2 1.0 1.8447e-02 1.0 2.15e+07 1.0 6.4e+01 1.0e+04 6.6e+01 2 10 8 9 14 2 10 8 9 15 2304 206s GAMG smooth 2 1.0 1.4290e-02 1.0 7.27e+06 1.0 2.4e+01 1.7e+04 2.4e+01 1 3 3 5 5 1 3 3 5 5 1005 206s PCGAMGCreateL 2 1.0 1.3008e-01 1.0 5.45e+07 1.0 4.2e+01 6.0e+04 6.0e+01 13 26 5 35 13 13 26 5 35 14 836 206s GAMG PtAP 2 1.0 1.2882e-01 1.0 5.45e+07 1.0 3.1e+01 8.1e+04 2.6e+01 12 26 4 35 6 12 26 4 35 6 844 206s GAMG Reduce 1 1.0 4.1541e-02 1.0 1.70e+07 1.0 2.2e+01 3.6e+04 4.7e+01 4 8 3 11 10 4 8 3 11 11 799 206s PCGAMG Squ l00 1 1.0 9.6240e-03 1.0 0.00e+00 0.0 1.4e+01 3.5e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 206s PCGAMG Gal l00 1 1.0 8.8642e-02 1.0 3.82e+07 1.0 2.0e+01 8.7e+04 1.3e+01 9 18 2 24 3 9 18 2 24 3 853 206s PCGAMG Opt l00 1 1.0 9.7986e-03 1.0 5.01e+06 1.0 1.2e+01 2.5e+04 1.1e+01 1 2 2 4 2 1 2 2 4 2 1014 206s PCGAMG Gal l01 1 1.0 4.0290e-02 1.0 1.70e+07 1.0 1.1e+01 7.0e+04 1.3e+01 4 8 1 11 3 4 8 1 11 3 824 206s PCGAMG Opt l01 1 1.0 3.1126e-03 1.0 1.80e+06 1.2 1.2e+01 7.8e+03 1.1e+01 0 1 2 1 2 0 1 2 1 2 1072 206s PCSetUp 1 1.0 1.6875e-01 1.0 7.59e+07 1.0 3.0e+02 1.4e+04 3.1e+02 16 36 38 58 67 16 36 38 58 70 898 206s PCSetUpOnBlocks 20 1.0 1.4486e-03 30.0 2.68e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1847 206s PCApply 20 1.0 2.3952e-02 1.0 1.14e+08 1.0 4.4e+02 5.1e+03 2.0e+01 2 54 55 31 4 2 54 55 31 5 9471 206s PCApplyOnBlocks 20 1.0 2.4641e-04 18.0 1.08e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 4398 206s ------------------------------------------------------------------------------------------------------------------------ 206s 206s Object Type Creations Destructions. Reports information only for process 0. 206s 206s --- Event Stage 0: Main Stage 206s 206s Container 11 11 206s Matrix 82 82 206s Matrix Coarsen 2 2 206s Matrix Null Space 1 1 206s Index Set 60 60 206s IS L to G Mapping 5 5 206s Vector 179 179 206s Star Forest Graph 34 34 206s Krylov Solver 7 7 206s Preconditioner 7 7 206s Viewer 2 2 206s PetscRandom 2 2 206s Distributed Mesh 4 4 206s Discrete System 4 4 206s Weak Form 4 4 206s ======================================================================================================================== 206s Average time to get PetscTime(): 3.21e-08 206s Average time for MPI_Barrier(): 4.948e-07 206s Average time for zero size MPI_Send(): 2.87835e-05 206s #PETSc Option Table entries: 206s --ndofs 20000 # (source: command line) 206s --problem_type elasticity # (source: command line) 206s --scaling_type strong # (source: command line) 206s -ksp_rtol 1.0e-8 # (source: command line) 206s -ksp_type cg # (source: command line) 206s -ksp_view # (source: command line) 206s -log_view # (source: command line) 206s -matptap_via scalable # (source: command line) 206s -mg_levels_esteig_ksp_type cg # (source: command line) 206s -mg_levels_ksp_type chebyshev # (source: command line) 206s -mg_levels_pc_type jacobi # (source: command line) 206s -options_left # (source: command line) 206s -pc_gamg_coarse_eq_limit 1000 # (source: command line) 206s -pc_type gamg # (source: command line) 206s #End of PETSc Option Table entries 206s Compiled without FORTRAN kernels 206s Compiled with full precision matrices (default) 206s sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 206s Configure options: --build=x86_64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --with-library-name-suffix=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi " --CXX_LINKER_FLAGS="-Wl,--no-as-needed -Wl,-z,defs" --CC_LINKER_FLAGS=-Wl,-z,defs --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real --PETSC_ARCH=x86_64-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" CXXFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" FCFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=3" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,--package-metadata=%7B%22type%22:%22deb%22%2C%22os%22:%22ubuntu%22%2C%22name%22:%22petsc%22%2C%22version%22:%223.24.3+dfsg1-1ubuntu1%22%2C%22architecture%22:%22amd64%22%7D -flto=auto -ffat-lto-objects -Wl,-z,relro -fPIC" MAKEFLAGS= 206s ----------------------------------------- 206s Libraries compiled on 2026-01-26 06:54:57 on reproducible 206s Machine characteristics: Linux-6.8.0-90-generic-x86_64-with-glibc2.42 206s Using PETSc directory: /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real 206s Using PETSc arch: 206s ----------------------------------------- 206s 206s Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -Wdate-time -D_FORTIFY_SOURCE=3 206s Using Fortran compiler: mpif90 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=3 206s ----------------------------------------- 206s 206s Using include paths: -I/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu-dist -I/usr/include/superlu -I/usr/include/scotch -I/usr/include/hdf5/openmpi 206s ----------------------------------------- 206s 206s Using C linker: mpicc 206s Using Fortran linker: mpif90 206s Using libraries: -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/gcc/x86_64-linux-gnu/15 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -lfftw3 -lfftw3_mpi -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu_dist -lsuperlu -llapack -lblas -lptesmumps -lptscotch -lscotch -lptscotcherr -lhdf5 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lm -lOpenCL -lyaml -lX11 -lstdc++ -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ 206s ----------------------------------------- 206s 206s #PETSc Option Table entries: 206s --ndofs 20000 # (source: command line) 206s --problem_type elasticity # (source: command line) 206s --scaling_type strong # (source: command line) 206s -ksp_rtol 1.0e-8 # (source: command line) 206s -ksp_type cg # (source: command line) 206s -ksp_view # (source: command line) 206s -log_view # (source: command line) 206s -matptap_via scalable # (source: command line) 206s -mg_levels_esteig_ksp_type cg # (source: command line) 206s -mg_levels_ksp_type chebyshev # (source: command line) 206s -mg_levels_pc_type jacobi # (source: command line) 206s -options_left # (source: command line) 206s -pc_gamg_coarse_eq_limit 1000 # (source: command line) 206s -pc_type gamg # (source: command line) 206s #End of PETSc Option Table entries 206s WARNING! There are options you set that were not used! 206s WARNING! could be spelling mistake, etc! 206s There are 4 unused database options. They are: 206s Option left: name:--ndofs value: 20000 source: command line 206s Option left: name:--problem_type value: elasticity source: command line 206s Option left: name:--scaling_type value: strong source: command line 206s Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line 206s ==== poisson weak scaling (2 processes with ndofs=10000) ==== 206s [2026-02-02 05:36:10.298] [RANK: 0] [info] Using partitioner with cell data (1 cell types) 206s [2026-02-02 05:36:10.298] [RANK: 0] [info] Compute partition of cells across ranks 206s [2026-02-02 05:36:10.298] [RANK: 0] [info] Building mesh dual graph 206s [2026-02-02 05:36:10.298] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 206s [2026-02-02 05:36:10.326] [RANK: 0] [info] Build nonlocal part of mesh dual graph 206s [2026-02-02 05:36:10.327] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 206s [2026-02-02 05:36:10.327] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 206s [2026-02-02 05:36:10.327] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 1, 1 206s [2026-02-02 05:36:10.328] [RANK: 0] [info] Graph edges (local: 208524, non-local: 1188) 206s [2026-02-02 05:36:10.328] [RANK: 0] [info] Compute graph partition using PT-SCOTCH 207s [2026-02-02 05:36:11.663] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 207s [2026-02-02 05:36:11.668] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 207s [2026-02-02 05:36:11.689] [RANK: 0] [info] Extract basic topology: 212868->212868 207s [2026-02-02 05:36:11.691] [RANK: 0] [info] Build local dual graphs, re-order cells, and compute process boundary vertices. 207s [2026-02-02 05:36:11.691] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 207s [2026-02-02 05:36:11.744] [RANK: 0] [info] GPS pseudo-diameter:(160) 4491-49810 207s [2026-02-02 05:36:11.749] [RANK: 0] [info] Create topology (generalised) 207s [2026-02-02 05:36:11.753] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 207s [2026-02-02 05:36:11.754] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 207s [2026-02-02 05:36:11.762] [RANK: 0] [info] Compute ghost indices 207s [2026-02-02 05:36:11.762] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 207s [2026-02-02 05:36:11.762] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 207s [2026-02-02 05:36:11.765] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 207s [2026-02-02 05:36:11.765] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 207s [2026-02-02 05:36:11.774] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 207s [2026-02-02 05:36:11.774] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 207s [2026-02-02 05:36:11.774] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 207s [2026-02-02 05:36:11.774] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 207s [2026-02-02 05:36:11.776] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 207s [2026-02-02 05:36:11.776] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 207s [2026-02-02 05:36:11.776] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 207s [2026-02-02 05:36:11.776] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 207s [2026-02-02 05:36:11.776] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 207s [2026-02-02 05:36:11.776] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 1, 0.5 207s [2026-02-02 05:36:11.777] [RANK: 0] [info] Create Geometry (multiple) 207s [2026-02-02 05:36:11.777] [RANK: 0] [info] Got 1 dof layouts 207s [2026-02-02 05:36:11.777] [RANK: 0] [info] Checking required entities per dimension 207s [2026-02-02 05:36:11.777] [RANK: 0] [info] Cell type: 0 dofmap: 53217x4 207s [2026-02-02 05:36:11.779] [RANK: 0] [info] Global index computation 207s [2026-02-02 05:36:11.779] [RANK: 0] [info] Got 1 index_maps 207s [2026-02-02 05:36:11.779] [RANK: 0] [info] Get global indices 207s [2026-02-02 05:36:11.779] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 207s [2026-02-02 05:36:11.779] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 207s [2026-02-02 05:36:11.779] [RANK: 0] [info] Calling compute_local_to_global 207s [2026-02-02 05:36:11.779] [RANK: 0] [info] xdofs.size = 212868 207s [2026-02-02 05:36:11.779] [RANK: 0] [info] dofmap sizes = 212868 207s [2026-02-02 05:36:11.779] [RANK: 0] [info] all_dofmaps.size = 212868 207s [2026-02-02 05:36:11.779] [RANK: 0] [info] nodes.size = 10277 207s [2026-02-02 05:36:11.781] [RANK: 0] [info] Creating geometry with 1 dofmaps 207s UnitCube (27x22x30) to be refined 0 times 207s [2026-02-02 05:36:11.781] [RANK: 0] [info] Computing mesh entities of dimension 2 207s [2026-02-02 05:36:11.799] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 207s [2026-02-02 05:36:11.800] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 207s [2026-02-02 05:36:11.815] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 207s [2026-02-02 05:36:11.815] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 207s [2026-02-02 05:36:11.816] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 207s [2026-02-02 05:36:11.816] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. 207s [2026-02-02 05:36:11.817] [RANK: 0] [info] Checking required entities per dimension 207s [2026-02-02 05:36:11.817] [RANK: 0] [info] Cell type: 0 dofmap: 53217x4 207s [2026-02-02 05:36:11.819] [RANK: 0] [info] Global index computation 207s [2026-02-02 05:36:11.819] [RANK: 0] [info] Got 1 index_maps 207s [2026-02-02 05:36:11.819] [RANK: 0] [info] Get global indices 207s [2026-02-02 05:36:11.820] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 207s [2026-02-02 05:36:11.820] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 207s [2026-02-02 05:36:11.820] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) 207s [2026-02-02 05:36:11.828] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 207s [2026-02-02 05:36:11.828] [RANK: 0] [info] Requesting connectivity (3, 0) - (2, 0) 207s [2026-02-02 05:36:11.835] [RANK: 0] [info] Column ghost size increased from 326 to 858 207s ---------------------------------------------------------------- 207s Test problem summary 207s dolfinx version: 0.10.0 207s dolfinx hash: ubuntu 207s ufl hash: 58f3dc30e5e56245b795ae796fe6a103649e8345 207s petsc version: PETSc Release Version 3.24.3, Jan 01, 2026 207s Problem type: poisson 207s Scaling type: weak 207s Num processes: 2 207s Num cells: 106920 (107 thousand) 207s Total degrees of freedom: 19964 (20 thousand) 207s Average degrees of freedom per process: 9982 207s ---------------------------------------------------------------- 207s [2026-02-02 05:36:11.856] [RANK: 0] [info] PETSc Krylov solver starting to solve system. 208s KSP Object: 2 MPI processes 208s type: cg 208s maximum iterations=10000, initial guess is zero 208s tolerances: relative=1e-08, absolute=1e-50, divergence=10000. 208s left preconditioning 208s using PRECONDITIONED norm type for convergence test 208s PC Object: 2 MPI processes 208s type: hypre 208s HYPRE BoomerAMG preconditioning 208s Cycle type V 208s Maximum number of levels 25 208s Maximum number of iterations PER hypre call 1 208s Convergence tolerance PER hypre call 0. 208s Threshold for strong coupling 0.5 208s Interpolation truncation factor 0. 208s Interpolation: max elements per row 0 208s Number of levels of aggressive coarsening 0 208s Number of paths for aggressive coarsening 1 208s Maximum row sums 0.9 208s Sweeps down 1 208s Sweeps up 1 208s Sweeps on coarse 1 208s Relax down symmetric-SOR/Jacobi 208s Relax up symmetric-SOR/Jacobi 208s Relax on coarse Gaussian-elimination 208s Relax weight (all) 1. 208s Outer relax weight (all) 1. 208s Maximum size of coarsest grid 9 208s Minimum size of coarsest grid 1 208s Using CF-relaxation 208s Not using more complex smoothers. 208s Measure type local 208s Coarsen type Falgout 208s Interpolation type classical 208s SpGEMM type hypre 208s linear system matrix = precond matrix: 208s Mat Object: 2 MPI processes 208s type: mpiaij 208s rows=19964, cols=19964 208s total: nonzeros=281986, allocated nonzeros=281986 208s total number of mallocs used during MatSetValues calls=0 208s not using I-node (on process 0) routines 208s 208s [MPI_MAX] Summary of timings (s) | reps avg tot 208s ------------------------------------------------------------------------------------------------------- 208s Build BoxMesh (tetrahedra) | 1 1.484218 1.484218 208s Build dofmap data | 2 0.002706 0.005412 208s Compute connectivity 2-0 | 1 0.000546 0.000546 208s Compute dof reordering map | 2 0.000211 0.000422 208s Compute entities of dim = 2 | 1 0.035187 0.035187 208s Compute graph partition (SCOTCH) | 1 1.331121 1.331121 208s Compute local part of mesh dual graph (mixed) | 2 0.040516 0.081031 208s Compute local-to-local map | 1 0.000826 0.000826 208s Compute non-local part of mesh dual graph | 1 0.002575 0.002575 208s Compute-local-to-global links for global/local adjacency list | 1 0.000560 0.000560 208s Distribute fixed-degree adjacency list to destination ranks | 1 0.030790 0.030790 208s Distribute row-wise data (scalable) | 1 0.000770 0.000770 208s GPS: create_level_structure | 3 0.001016 0.003047 208s Gibbs-Poole-Stockmeyer ordering | 1 0.006754 0.006754 208s Init MPI | 1 0.012248 0.012248 208s Init PETSc | 1 0.000356 0.000356 208s Init dofmap from element dofmap | 2 0.002121 0.004242 208s Init logging | 1 0.000003 0.000003 208s PETSc Krylov solver | 1 0.084522 0.084522 208s SparsityPattern::finalize | 1 0.005568 0.005568 208s Topology: create | 1 0.026459 0.026459 208s Topology: determine shared index ownership | 1 0.003428 0.003428 208s Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.003742 0.003742 208s ZZZ Assemble | 1 0.035240 0.035240 208s ZZZ Assemble matrix | 1 0.016114 0.016114 208s ZZZ Assemble vector | 1 0.002775 0.002775 208s ZZZ Create Mesh | 1 1.484278 1.484278 208s ZZZ Create RHS function | 1 0.007271 0.007271 208s ZZZ Create boundary conditions | 1 0.000756 0.000756 208s ZZZ Create facets and facet->cell connectivity | 1 0.035781 0.035781 208s ZZZ FunctionSpace | 1 0.002826 0.002826 208s ZZZ Solve | 1 0.085291 0.085291 208s *** Number of Krylov iterations: 6 208s *** Solution norm: 30.0262 208s **************************************************************************************************************************************************************** 208s *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** 208s **************************************************************************************************************************************************************** 208s 208s ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ 208s 208s ./dolfinx-scaling-test on a named autopkgtest with 2 processes, by ubuntu on Mon Feb 2 05:36:11 2026 208s Using PETSc Release Version 3.24.3, Jan 01, 2026 208s 208s Max Max/Min Avg Total 208s Time (sec): 1.644e+00 1.000 1.644e+00 208s Objects: 0.000e+00 0.000 0.000e+00 208s Flops: 3.106e+06 1.008 3.094e+06 6.188e+06 208s Flops/sec: 1.889e+06 1.008 1.882e+06 3.764e+06 208s MPI Msg Count: 1.400e+01 1.000 1.400e+01 2.800e+01 208s MPI Msg Len (bytes): 1.011e+05 1.000 7.218e+03 2.021e+05 208s MPI Reductions: 6.900e+01 1.000 208s 208s Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) 208s e.g., VecAXPY() for real vectors of length N --> 2N flops 208s and VecAXPY() for complex vectors of length N --> 8N flops 208s 208s Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- 208s Avg %Total Avg %Total Count %Total Avg %Total Count %Total 208s 0: Main Stage: 1.6441e+00 100.0% 6.1885e+06 100.0% 2.800e+01 100.0% 7.218e+03 100.0% 5.100e+01 73.9% 208s 208s ------------------------------------------------------------------------------------------------------------------------ 208s See the 'Profiling' chapter of the users' manual for details on interpreting output. 208s Phase summary info: 208s Count: number of times phase was executed 208s Time and Flop: Max - maximum over all processes 208s Ratio - ratio of maximum to minimum over all processes 208s Mess: number of messages sent 208s AvgLen: average message length (bytes) 208s Reduct: number of global reductions 208s Global: entire computation 208s Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). 208s %T - percent time in this phase %F - percent flop in this phase 208s %M - percent messages in this phase %L - percent message lengths in this phase 208s %R - percent reductions in this phase 208s Total Mflop/s: 1e-6 * (sum of flop over all processes)/(max time over all processes) 208s ------------------------------------------------------------------------------------------------------------------------ 208s Event Count Time (sec) Flop --- Global --- --- Stage ---- Total 208s Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s 208s ------------------------------------------------------------------------------------------------------------------------ 208s 208s --- Event Stage 0: Main Stage 208s 208s BuildTwoSided 5 1.0 3.1166e-04 11.4 0.00e+00 0.0 8.0e+00 4.0e+00 5.0e+00 0 0 29 0 7 0 0 29 0 10 0 208s BuildTwoSidedF 2 1.0 3.1011e-04 14.1 0.00e+00 0.0 4.0e+00 2.7e+04 2.0e+00 0 0 14 53 3 0 0 14 53 4 0 208s MatMult 6 1.0 6.1603e-04 1.0 1.64e+06 1.0 1.2e+01 6.8e+03 0.0e+00 0 53 43 41 0 0 53 43 41 0 5299 208s MatConvert 1 1.0 1.9858e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 208s MatAssemblyBegin 5 1.0 9.0010e-04 1.5 0.00e+00 0.0 4.0e+00 2.7e+04 2.0e+00 0 0 14 53 3 0 0 14 53 4 0 208s MatAssemblyEnd 5 1.0 1.6598e-03 1.3 2.16e+03 1.0 4.0e+00 1.7e+03 5.0e+00 0 0 14 3 7 0 0 14 3 10 3 208s MatGetRowIJ 4 1.0 7.8100e-07 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 208s MatView 1 1.0 9.2981e-04 5.4 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 208s MatSetPreallCOO 2 1.0 9.1579e-04 1.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 208s MatSetValuesCOO 2 1.0 3.0514e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 208s VecTDot 14 1.0 1.7124e-04 1.0 2.80e+05 1.0 0.0e+00 0.0e+00 1.4e+01 0 9 0 0 20 0 9 0 0 27 3264 208s VecNorm 7 1.0 1.2945e-04 1.7 1.40e+05 1.0 0.0e+00 0.0e+00 7.0e+00 0 5 0 0 10 0 5 0 0 14 2159 208s VecCopy 2 1.0 1.0957e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 208s VecSet 8 1.0 1.2368e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 208s VecAXPY 12 1.0 3.4854e-05 1.0 2.40e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 13747 208s VecAYPX 5 1.0 1.8920e-05 1.0 1.00e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 10552 208s VecScatterBegin 6 1.0 3.3340e-05 1.1 0.00e+00 0.0 1.2e+01 6.8e+03 0.0e+00 0 0 43 41 0 0 0 43 41 0 0 208s VecScatterEnd 6 1.0 4.9444e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 208s SFSetGraph 3 1.0 1.0515e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 208s SFSetUp 3 1.0 4.4255e-05 1.1 0.00e+00 0.0 1.2e+01 1.0e+03 3.0e+00 0 0 43 6 4 0 0 43 6 6 0 208s SFPack 6 1.0 1.2298e-05 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 208s SFUnpack 6 1.0 6.0200e-07 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 208s KSPSetUp 1 1.0 1.2900e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 208s KSPSolve 1 1.0 2.5251e-02 1.0 2.40e+06 1.0 1.2e+01 6.8e+03 2.1e+01 2 77 43 41 30 2 77 43 41 41 189 208s PCSetUp 1 1.0 5.8228e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 4 0 0 0 3 4 0 0 0 4 0 208s PCApply 7 1.0 2.4300e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 1 0 0 0 0 1 0 0 0 0 0 208s ------------------------------------------------------------------------------------------------------------------------ 208s 208s Object Type Creations Destructions. Reports information only for process 0. 208s 208s --- Event Stage 0: Main Stage 208s 208s Container 2 2 208s Matrix 7 7 208s Index Set 6 6 208s IS L to G Mapping 1 1 208s Vector 12 12 208s Star Forest Graph 3 3 208s Krylov Solver 1 1 208s Preconditioner 1 1 208s Viewer 1 1 208s ======================================================================================================================== 208s Average time to get PetscTime(): 3.1e-08 208s Average time for MPI_Barrier(): 4.266e-07 208s Average time for zero size MPI_Send(): 2.5785e-06 208s #PETSc Option Table entries: 208s --ndofs 10000 # (source: command line) 208s --problem_type poisson # (source: command line) 208s --scaling_type weak # (source: command line) 208s -ksp_rtol 1.0e-8 # (source: command line) 208s -ksp_type cg # (source: command line) 208s -ksp_view # (source: command line) 208s -log_view # (source: command line) 208s -options_left # (source: command line) 208s -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) 208s -pc_hypre_type boomeramg # (source: command line) 208s -pc_type hypre # (source: command line) 208s #End of PETSc Option Table entries 208s Compiled without FORTRAN kernels 208s Compiled with full precision matrices (default) 208s sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 208s Configure options: --build=x86_64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --with-library-name-suffix=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi " --CXX_LINKER_FLAGS="-Wl,--no-as-needed -Wl,-z,defs" --CC_LINKER_FLAGS=-Wl,-z,defs --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real --PETSC_ARCH=x86_64-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" CXXFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" FCFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=3" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,--package-metadata=%7B%22type%22:%22deb%22%2C%22os%22:%22ubuntu%22%2C%22name%22:%22petsc%22%2C%22version%22:%223.24.3+dfsg1-1ubuntu1%22%2C%22architecture%22:%22amd64%22%7D -flto=auto -ffat-lto-objects -Wl,-z,relro -fPIC" MAKEFLAGS= 208s ----------------------------------------- 208s Libraries compiled on 2026-01-26 06:54:57 on reproducible 208s Machine characteristics: Linux-6.8.0-90-generic-x86_64-with-glibc2.42 208s Using PETSc directory: /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real 208s Using PETSc arch: 208s ----------------------------------------- 208s 208s Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -Wdate-time -D_FORTIFY_SOURCE=3 208s Using Fortran compiler: mpif90 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=3 208s ----------------------------------------- 208s 208s Using include paths: -I/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu-dist -I/usr/include/superlu -I/usr/include/scotch -I/usr/include/hdf5/openmpi 208s ----------------------------------------- 208s 208s Using C linker: mpicc 208s Using Fortran linker: mpif90 208s Using libraries: -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/gcc/x86_64-linux-gnu/15 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -lfftw3 -lfftw3_mpi -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu_dist -lsuperlu -llapack -lblas -lptesmumps -lptscotch -lscotch -lptscotcherr -lhdf5 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lm -lOpenCL -lyaml -lX11 -lstdc++ -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ 208s ----------------------------------------- 208s 208s #PETSc Option Table entries: 208s --ndofs 10000 # (source: command line) 208s --problem_type poisson # (source: command line) 208s --scaling_type weak # (source: command line) 208s -ksp_rtol 1.0e-8 # (source: command line) 208s -ksp_type cg # (source: command line) 208s -ksp_view # (source: command line) 208s -log_view # (source: command line) 208s -options_left # (source: command line) 208s -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) 208s -pc_hypre_type boomeramg # (source: command line) 208s -pc_type hypre # (source: command line) 208s #End of PETSc Option Table entries 208s WARNING! There are options you set that were not used! 208s WARNING! could be spelling mistake, etc! 208s There are 3 unused database options. They are: 208s Option left: name:--ndofs value: 10000 source: command line 208s Option left: name:--problem_type value: poisson source: command line 208s Option left: name:--scaling_type value: weak source: command line 208s ==== poisson strong scaling (2 processes with ndofs=20000) ==== 208s [2026-02-02 05:36:12.176] [RANK: 0] [info] Using partitioner with cell data (1 cell types) 208s [2026-02-02 05:36:12.176] [RANK: 0] [info] Compute partition of cells across ranks 208s [2026-02-02 05:36:12.176] [RANK: 0] [info] Building mesh dual graph 208s [2026-02-02 05:36:12.176] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 208s [2026-02-02 05:36:12.204] [RANK: 0] [info] Build nonlocal part of mesh dual graph 208s [2026-02-02 05:36:12.205] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 208s [2026-02-02 05:36:12.205] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 208s [2026-02-02 05:36:12.205] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 1, 1 208s [2026-02-02 05:36:12.206] [RANK: 0] [info] Graph edges (local: 208524, non-local: 1188) 208s [2026-02-02 05:36:12.206] [RANK: 0] [info] Compute graph partition using PT-SCOTCH 209s [2026-02-02 05:36:13.541] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 209s [2026-02-02 05:36:13.543] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 209s [2026-02-02 05:36:13.565] [RANK: 0] [info] Extract basic topology: 212796->212796 209s [2026-02-02 05:36:13.565] [RANK: 0] [info] Build local dual graphs, re-order cells, and compute process boundary vertices. 209s [2026-02-02 05:36:13.565] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 209s [2026-02-02 05:36:13.617] [RANK: 0] [info] GPS pseudo-diameter:(158) 8872-49792 209s [2026-02-02 05:36:13.625] [RANK: 0] [info] Create topology (generalised) 209s [2026-02-02 05:36:13.629] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 209s [2026-02-02 05:36:13.629] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 209s [2026-02-02 05:36:13.636] [RANK: 0] [info] Compute ghost indices 209s [2026-02-02 05:36:13.636] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 209s [2026-02-02 05:36:13.637] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 209s [2026-02-02 05:36:13.639] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 209s [2026-02-02 05:36:13.639] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 209s [2026-02-02 05:36:13.648] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 209s [2026-02-02 05:36:13.648] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 209s [2026-02-02 05:36:13.648] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 209s [2026-02-02 05:36:13.648] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 209s [2026-02-02 05:36:13.650] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 209s [2026-02-02 05:36:13.650] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 209s [2026-02-02 05:36:13.650] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 209s [2026-02-02 05:36:13.650] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 209s [2026-02-02 05:36:13.650] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 209s [2026-02-02 05:36:13.650] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 1, 0.5 209s [2026-02-02 05:36:13.651] [RANK: 0] [info] Create Geometry (multiple) 209s [2026-02-02 05:36:13.651] [RANK: 0] [info] Got 1 dof layouts 209s [2026-02-02 05:36:13.651] [RANK: 0] [info] Checking required entities per dimension 209s [2026-02-02 05:36:13.651] [RANK: 0] [info] Cell type: 0 dofmap: 53199x4 209s [2026-02-02 05:36:13.653] [RANK: 0] [info] Global index computation 209s [2026-02-02 05:36:13.653] [RANK: 0] [info] Got 1 index_maps 209s [2026-02-02 05:36:13.653] [RANK: 0] [info] Get global indices 209s [2026-02-02 05:36:13.653] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 209s [2026-02-02 05:36:13.653] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 209s [2026-02-02 05:36:13.653] [RANK: 0] [info] Calling compute_local_to_global 209s [2026-02-02 05:36:13.654] [RANK: 0] [info] xdofs.size = 212796 209s [2026-02-02 05:36:13.654] [RANK: 0] [info] dofmap sizes = 212796 209s [2026-02-02 05:36:13.654] [RANK: 0] [info] all_dofmaps.size = 212796 209s [2026-02-02 05:36:13.654] [RANK: 0] [info] nodes.size = 10269 209s [2026-02-02 05:36:13.655] [RANK: 0] [info] Creating geometry with 1 dofmaps 209s UnitCube (27x22x30) to be refined 0 times 209s [2026-02-02 05:36:13.655] [RANK: 0] [info] Computing mesh entities of dimension 2 209s [2026-02-02 05:36:13.673] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 209s [2026-02-02 05:36:13.673] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 209s [2026-02-02 05:36:13.689] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 209s [2026-02-02 05:36:13.689] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 209s [2026-02-02 05:36:13.690] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 209s [2026-02-02 05:36:13.690] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. 209s [2026-02-02 05:36:13.691] [RANK: 0] [info] Checking required entities per dimension 209s [2026-02-02 05:36:13.691] [RANK: 0] [info] Cell type: 0 dofmap: 53199x4 209s [2026-02-02 05:36:13.693] [RANK: 0] [info] Global index computation 209s [2026-02-02 05:36:13.693] [RANK: 0] [info] Got 1 index_maps 209s [2026-02-02 05:36:13.693] [RANK: 0] [info] Get global indices 209s [2026-02-02 05:36:13.693] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 209s [2026-02-02 05:36:13.694] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 209s [2026-02-02 05:36:13.694] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) 209s [2026-02-02 05:36:13.702] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 209s [2026-02-02 05:36:13.702] [RANK: 0] [info] Requesting connectivity (3, 0) - (2, 0) 209s [2026-02-02 05:36:13.710] [RANK: 0] [info] Column ghost size increased from 327 to 865 209s ---------------------------------------------------------------- 209s Test problem summary 209s dolfinx version: 0.10.0 209s dolfinx hash: ubuntu 209s ufl hash: 58f3dc30e5e56245b795ae796fe6a103649e8345 209s petsc version: PETSc Release Version 3.24.3, Jan 01, 2026 209s Problem type: poisson 209s Scaling type: strong 209s Num processes: 2 209s Num cells: 106920 (107 thousand) 209s Total degrees of freedom: 19964 (20 thousand) 209s Average degrees of freedom per process: 9982 209s ---------------------------------------------------------------- 209s [2026-02-02 05:36:13.730] [RANK: 0] [info] PETSc Krylov solver starting to solve system. 209s KSP Object: 2 MPI processes 209s type: cg 209s maximum iterations=10000, initial guess is zero 209s tolerances: relative=1e-08, absolute=1e-50, divergence=10000. 209s left preconditioning 209s using PRECONDITIONED norm type for convergence test 209s PC Object: 2 MPI processes 209s type: hypre 209s HYPRE BoomerAMG preconditioning 209s Cycle type V 209s Maximum number of levels 25 209s Maximum number of iterations PER hypre call 1 209s Convergence tolerance PER hypre call 0. 209s Threshold for strong coupling 0.5 209s Interpolation truncation factor 0. 209s Interpolation: max elements per row 0 209s Number of levels of aggressive coarsening 0 209s Number of paths for aggressive coarsening 1 209s Maximum row sums 0.9 209s Sweeps down 1 209s Sweeps up 1 209s Sweeps on coarse 1 209s Relax down symmetric-SOR/Jacobi 209s Relax up symmetric-SOR/Jacobi 209s Relax on coarse Gaussian-elimination 209s Relax weight (all) 1. 209s Outer relax weight (all) 1. 209s Maximum size of coarsest grid 9 209s Minimum size of coarsest grid 1 209s Using CF-relaxation 209s Not using more complex smoothers. 209s Measure type local 209s Coarsen type Falgout 209s Interpolation type classical 209s SpGEMM type hypre 209s linear system matrix = precond matrix: 209s Mat Object: 2 MPI processes 209s type: mpiaij 209s rows=19964, cols=19964 209s total: nonzeros=281986, allocated nonzeros=281986 209s total number of mallocs used during MatSetValues calls=0 209s not using I-node (on process 0) routines 209s 209s [MPI_MAX] Summary of timings (s) | reps avg tot 209s ------------------------------------------------------------------------------------------------------- 209s Build BoxMesh (tetrahedra) | 1 1.480223 1.480223 209s Build dofmap data | 2 0.002848 0.005695 209s Compute connectivity 2-0 | 1 0.000527 0.000527 209s Compute dof reordering map | 2 0.000201 0.000402 209s Compute entities of dim = 2 | 1 0.035081 0.035081 209s Compute graph partition (SCOTCH) | 1 1.330181 1.330181 209s Compute local part of mesh dual graph (mixed) | 2 0.041865 0.083731 209s Compute local-to-local map | 1 0.000882 0.000882 209s Compute non-local part of mesh dual graph | 1 0.002172 0.002172 209s Compute-local-to-global links for global/local adjacency list | 1 0.000545 0.000545 209s Distribute fixed-degree adjacency list to destination ranks | 1 0.028291 0.028291 209s Distribute row-wise data (scalable) | 1 0.000751 0.000751 209s GPS: create_level_structure | 3 0.000340 0.001021 209s Gibbs-Poole-Stockmeyer ordering | 1 0.005916 0.005916 209s Init MPI | 1 0.011518 0.011518 209s Init PETSc | 1 0.000460 0.000460 209s Init dofmap from element dofmap | 2 0.002280 0.004559 209s Init logging | 1 0.000003 0.000003 209s PETSc Krylov solver | 1 0.086197 0.086197 209s SparsityPattern::finalize | 1 0.005840 0.005840 209s Topology: create | 1 0.023128 0.023128 209s Topology: determine shared index ownership | 1 0.000469 0.000469 209s Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.003339 0.003339 209s ZZZ Assemble | 1 0.035775 0.035775 209s ZZZ Assemble matrix | 1 0.016417 0.016417 209s ZZZ Assemble vector | 1 0.002764 0.002764 209s ZZZ Create Mesh | 1 1.480280 1.480280 209s ZZZ Create RHS function | 1 0.007246 0.007246 209s ZZZ Create boundary conditions | 1 0.000692 0.000692 209s ZZZ Create facets and facet->cell connectivity | 1 0.035592 0.035592 209s ZZZ FunctionSpace | 1 0.003068 0.003068 209s ZZZ Solve | 1 0.087037 0.087037 209s *** Number of Krylov iterations: 6 209s *** Solution norm: 30.0262 209s **************************************************************************************************************************************************************** 209s *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** 209s **************************************************************************************************************************************************************** 209s 209s ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ 209s 209s ./dolfinx-scaling-test on a named autopkgtest with 2 processes, by ubuntu on Mon Feb 2 05:36:13 2026 209s Using PETSc Release Version 3.24.3, Jan 01, 2026 209s 209s Max Max/Min Avg Total 209s Time (sec): 1.643e+00 1.000 1.643e+00 209s Objects: 0.000e+00 0.000 0.000e+00 209s Flops: 3.109e+06 1.009 3.094e+06 6.188e+06 209s Flops/sec: 1.892e+06 1.009 1.884e+06 3.768e+06 209s MPI Msg Count: 1.400e+01 1.000 1.400e+01 2.800e+01 209s MPI Msg Len (bytes): 1.018e+05 1.000 7.269e+03 2.035e+05 209s MPI Reductions: 6.900e+01 1.000 209s 209s Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) 209s e.g., VecAXPY() for real vectors of length N --> 2N flops 209s and VecAXPY() for complex vectors of length N --> 8N flops 209s 209s Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- 209s Avg %Total Avg %Total Count %Total Avg %Total Count %Total 209s 0: Main Stage: 1.6425e+00 100.0% 6.1883e+06 100.0% 2.800e+01 100.0% 7.269e+03 100.0% 5.100e+01 73.9% 209s 209s ------------------------------------------------------------------------------------------------------------------------ 209s See the 'Profiling' chapter of the users' manual for details on interpreting output. 209s Phase summary info: 209s Count: number of times phase was executed 209s Time and Flop: Max - maximum over all processes 209s Ratio - ratio of maximum to minimum over all processes 209s Mess: number of messages sent 209s AvgLen: average message length (bytes) 209s Reduct: number of global reductions 209s Global: entire computation 209s Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). 209s %T - percent time in this phase %F - percent flop in this phase 209s %M - percent messages in this phase %L - percent message lengths in this phase 209s %R - percent reductions in this phase 209s Total Mflop/s: 1e-6 * (sum of flop over all processes)/(max time over all processes) 209s ------------------------------------------------------------------------------------------------------------------------ 209s Event Count Time (sec) Flop --- Global --- --- Stage ---- Total 209s Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s 209s ------------------------------------------------------------------------------------------------------------------------ 209s 209s --- Event Stage 0: Main Stage 209s 209s BuildTwoSided 5 1.0 4.9101e-04 18.4 0.00e+00 0.0 8.0e+00 4.0e+00 5.0e+00 0 0 29 0 7 0 0 29 0 10 0 209s BuildTwoSidedF 2 1.0 4.9012e-04 20.1 0.00e+00 0.0 4.0e+00 2.7e+04 2.0e+00 0 0 14 53 3 0 0 14 53 4 0 209s MatMult 6 1.0 6.2714e-04 1.0 1.64e+06 1.0 1.2e+01 6.9e+03 0.0e+00 0 53 43 41 0 0 53 43 41 0 5205 209s MatConvert 1 1.0 1.8746e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 209s MatAssemblyBegin 5 1.0 1.0921e-03 1.8 0.00e+00 0.0 4.0e+00 2.7e+04 2.0e+00 0 0 14 53 3 0 0 14 53 4 0 209s MatAssemblyEnd 5 1.0 1.5622e-03 1.3 2.18e+03 1.0 4.0e+00 1.7e+03 5.0e+00 0 0 14 3 7 0 0 14 3 10 3 209s MatGetRowIJ 4 1.0 8.5100e-07 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 209s MatView 1 1.0 8.0217e-04 12.9 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 210s MatSetPreallCOO 2 1.0 8.1415e-04 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 210s MatSetValuesCOO 2 1.0 3.0655e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 210s VecTDot 14 1.0 1.2761e-04 1.0 2.81e+05 1.0 0.0e+00 0.0e+00 1.4e+01 0 9 0 0 20 0 9 0 0 27 4380 210s VecNorm 7 1.0 1.4781e-04 1.9 1.40e+05 1.0 0.0e+00 0.0e+00 7.0e+00 0 5 0 0 10 0 5 0 0 14 1891 210s VecCopy 2 1.0 1.1657e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 210s VecSet 8 1.0 1.1539e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 210s VecAXPY 12 1.0 2.8021e-05 1.0 2.41e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 17099 210s VecAYPX 5 1.0 2.0110e-05 1.1 1.00e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 9927 210s VecScatterBegin 6 1.0 3.1467e-05 1.1 0.00e+00 0.0 1.2e+01 6.9e+03 0.0e+00 0 0 43 41 0 0 0 43 41 0 0 210s VecScatterEnd 6 1.0 5.6485e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 210s SFSetGraph 3 1.0 1.0326e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 210s SFSetUp 3 1.0 4.1142e-05 1.0 0.00e+00 0.0 1.2e+01 1.0e+03 3.0e+00 0 0 43 6 4 0 0 43 6 6 0 210s SFPack 6 1.0 9.4130e-06 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 210s SFUnpack 6 1.0 5.3000e-07 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 210s KSPSetUp 1 1.0 1.0168e-04 7.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 210s KSPSolve 1 1.0 2.5992e-02 1.0 2.40e+06 1.0 1.2e+01 6.9e+03 2.1e+01 2 77 43 41 30 2 77 43 41 41 184 210s PCSetUp 1 1.0 5.9343e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 4 0 0 0 3 4 0 0 0 4 0 210s PCApply 7 1.0 2.5077e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 2 0 0 0 0 2 0 0 0 0 0 210s ------------------------------------------------------------------------------------------------------------------------ 210s 210s Object Type Creations Destructions. Reports information only for process 0. 210s 210s --- Event Stage 0: Main Stage 210s 210s Container 2 2 210s Matrix 7 7 210s Index Set 6 6 210s IS L to G Mapping 1 1 210s Vector 12 12 210s Star Forest Graph 3 3 210s Krylov Solver 1 1 210s Preconditioner 1 1 210s Viewer 1 1 210s ======================================================================================================================== 210s Average time to get PetscTime(): 3.1e-08 210s Average time for MPI_Barrier(): 4.448e-07 210s Average time for zero size MPI_Send(): 3.24685e-05 210s #PETSc Option Table entries: 210s --ndofs 20000 # (source: command line) 210s --problem_type poisson # (source: command line) 210s --scaling_type strong # (source: command line) 210s -ksp_rtol 1.0e-8 # (source: command line) 210s -ksp_type cg # (source: command line) 210s -ksp_view # (source: command line) 210s -log_view # (source: command line) 210s -options_left # (source: command line) 210s -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) 210s -pc_hypre_type boomeramg # (source: command line) 210s -pc_type hypre # (source: command line) 210s #End of PETSc Option Table entries 210s Compiled without FORTRAN kernels 210s Compiled with full precision matrices (default) 210s sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 210s Configure options: --build=x86_64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --with-library-name-suffix=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi " --CXX_LINKER_FLAGS="-Wl,--no-as-needed -Wl,-z,defs" --CC_LINKER_FLAGS=-Wl,-z,defs --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real --PETSC_ARCH=x86_64-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" CXXFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" FCFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=3" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,--package-metadata=%7B%22type%22:%22deb%22%2C%22os%22:%22ubuntu%22%2C%22name%22:%22petsc%22%2C%22version%22:%223.24.3+dfsg1-1ubuntu1%22%2C%22architecture%22:%22amd64%22%7D -flto=auto -ffat-lto-objects -Wl,-z,relro -fPIC" MAKEFLAGS= 210s ----------------------------------------- 210s Libraries compiled on 2026-01-26 06:54:57 on reproducible 210s Machine characteristics: Linux-6.8.0-90-generic-x86_64-with-glibc2.42 210s Using PETSc directory: /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real 210s Using PETSc arch: 210s ----------------------------------------- 210s 210s Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -Wdate-time -D_FORTIFY_SOURCE=3 210s Using Fortran compiler: mpif90 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=3 210s ----------------------------------------- 210s 210s Using include paths: -I/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu-dist -I/usr/include/superlu -I/usr/include/scotch -I/usr/include/hdf5/openmpi 210s ----------------------------------------- 210s 210s Using C linker: mpicc 210s Using Fortran linker: mpif90 210s Using libraries: -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/gcc/x86_64-linux-gnu/15 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -lfftw3 -lfftw3_mpi -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu_dist -lsuperlu -llapack -lblas -lptesmumps -lptscotch -lscotch -lptscotcherr -lhdf5 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lm -lOpenCL -lyaml -lX11 -lstdc++ -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ 210s ----------------------------------------- 210s 210s #PETSc Option Table entries: 210s --ndofs 20000 # (source: command line) 210s --problem_type poisson # (source: command line) 210s --scaling_type strong # (source: command line) 210s -ksp_rtol 1.0e-8 # (source: command line) 210s -ksp_type cg # (source: command line) 210s -ksp_view # (source: command line) 210s -log_view # (source: command line) 210s -options_left # (source: command line) 210s -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) 210s -pc_hypre_type boomeramg # (source: command line) 210s -pc_type hypre # (source: command line) 210s #End of PETSc Option Table entries 210s WARNING! There are options you set that were not used! 210s WARNING! could be spelling mistake, etc! 210s There are 3 unused database options. They are: 210s Option left: name:--ndofs value: 20000 source: command line 210s Option left: name:--problem_type value: poisson source: command line 210s Option left: name:--scaling_type value: strong source: command line 210s autopkgtest [05:36:14]: test dolfinx-performance-test-source: -----------------------] 210s dolfinx-performance-test-source PASS 210s autopkgtest [05:36:14]: test dolfinx-performance-test-source: - - - - - - - - - - results - - - - - - - - - - 211s autopkgtest [05:36:15]: @@@@@@@@@@@@@@@@@@@@ summary 211s dolfinx-performance-test-binary PASS 211s dolfinx-performance-test-source PASS