0s autopkgtest [19:36:20]: starting date and time: 2026-02-01 19:36:20+0000 0s autopkgtest [19:36:20]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [19:36:20]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.4pm7s0cs/out --timeout-copy=6000 --needs-internet=try --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:fenics-basix,src:nanobind --apt-upgrade fenicsx-performance-tests --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=fenics-basix/0.10.0.post0-2build1 nanobind/2.10.2-2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-amd64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@sto01-5.secgroup --name adt-resolute-amd64-fenicsx-performance-tests-20260201-193620-juju-7f2275-prod-proposed-migration-environment-15-eae32018-41b7-450b-9f83-729cb2af498e --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-autopkgtest-workers-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 4s Creating nova instance adt-resolute-amd64-fenicsx-performance-tests-20260201-193620-juju-7f2275-prod-proposed-migration-environment-15-eae32018-41b7-450b-9f83-729cb2af498e from image adt/ubuntu-resolute-amd64-server-20260201.img (UUID 3f0dc02a-532c-4fab-8f89-dfe5d9268d76)... 89s autopkgtest [19:37:49]: testbed dpkg architecture: amd64 89s autopkgtest [19:37:49]: testbed apt version: 3.1.14 89s autopkgtest [19:37:49]: @@@@@@@@@@@@@@@@@@@@ test bed setup 89s autopkgtest [19:37:49]: testbed release detected to be: None 90s autopkgtest [19:37:50]: updating testbed package index (apt update) 90s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [124 kB] 90s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 90s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 90s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 91s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [2816 B] 91s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [27.4 kB] 91s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [103 kB] 91s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [1231 kB] 91s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [100.0 kB] 91s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [117 kB] 91s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [3616 B] 91s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted i386 Packages [3692 B] 91s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 Packages [12.3 kB] 91s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [336 B] 91s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [400 kB] 91s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [1063 kB] 91s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [27.0 kB] 91s Get:18 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [3336 B] 91s Get:19 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [23.7 kB] 91s Get:20 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [1036 B] 92s Fetched 3244 kB in 1s (3590 kB/s) 93s Reading package lists... 94s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 94s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 94s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 94s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 95s Reading package lists... 95s Reading package lists... 95s Building dependency tree... 95s Reading state information... 95s Calculating upgrade... 96s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 96s autopkgtest [19:37:56]: upgrading testbed (apt dist-upgrade and autopurge) 96s Reading package lists... 96s Building dependency tree... 96s Reading state information... 96s Calculating upgrade... 96s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 96s Reading package lists... 97s Building dependency tree... 97s Reading state information... 97s Solving dependencies... 97s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 99s autopkgtest [19:37:59]: testbed running kernel: Linux 6.18.0-9-generic #9-Ubuntu SMP PREEMPT_DYNAMIC Mon Jan 12 16:49:02 UTC 2026 99s autopkgtest [19:37:59]: @@@@@@@@@@@@@@@@@@@@ apt-source fenicsx-performance-tests 101s Get:1 http://ftpmaster.internal/ubuntu resolute/universe fenicsx-performance-tests 0.10.0-2 (dsc) [2476 B] 101s Get:2 http://ftpmaster.internal/ubuntu resolute/universe fenicsx-performance-tests 0.10.0-2 (tar) [21.2 kB] 101s Get:3 http://ftpmaster.internal/ubuntu resolute/universe fenicsx-performance-tests 0.10.0-2 (diff) [6428 B] 101s gpgv: Signature made Mon Dec 22 11:32:48 2025 UTC 101s gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA 101s gpgv: Can't check signature: No public key 101s dpkg-source: warning: cannot verify inline signature for ./fenicsx-performance-tests_0.10.0-2.dsc: no acceptable signature found 101s autopkgtest [19:38:01]: testing package fenicsx-performance-tests version 0.10.0-2 102s autopkgtest [19:38:02]: build not needed 102s autopkgtest [19:38:02]: test dolfinx-performance-test-binary: preparing testbed 102s Reading package lists... 102s Building dependency tree... 102s Reading state information... 103s Solving dependencies... 103s The following NEW packages will be installed: 103s autoconf automake autopoint autotools-dev build-essential cmake cmake-data 103s comerr-dev cpp cpp-15 cpp-15-x86-64-linux-gnu cpp-x86-64-linux-gnu debhelper 103s debugedit dh-autoreconf dh-strip-nondeterminism dwz 103s fenicsx-performance-tests fenicsx-performance-tests-source fonts-mathjax g++ 103s g++-15 g++-15-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-15 103s gcc-15-x86-64-linux-gnu gcc-x86-64-linux-gnu gettext gfortran gfortran-15 103s gfortran-15-x86-64-linux-gnu gfortran-x86-64-linux-gnu icu-devtools 103s intltool-debian krb5-multidev libadios2-common-c++11-dev 103s libadios2-common-core-dev libadios2-mpi-auxiliary-2.10 103s libadios2-mpi-auxiliary-dev libadios2-mpi-c++11-2.10 libadios2-mpi-c++11-dev 103s libadios2-mpi-c-2.10 libadios2-mpi-core-2.10 libadios2-mpi-core-dev 103s libadios2-mpi-plugins libaec-dev libaec0 libamd-comgr3 libamd3 libamdhip64-6 103s libarchive-zip-perl libarpack2-dev libarpack2t64 libasan8 libbasix-dev 103s libbasix0.10 libblas-dev libblas3 libblosc2-6 libboost-atomic1.88-dev 103s libboost-atomic1.88.0 libboost-chrono-dev libboost-chrono1.88-dev 103s libboost-chrono1.88.0 libboost-container1.88-dev libboost-container1.88.0 103s libboost-date-time1.88-dev libboost-date-time1.88.0 libboost-dev 103s libboost-filesystem-dev libboost-filesystem1.88-dev 103s libboost-filesystem1.88.0 libboost-graph1.88-dev libboost-graph1.88.0 103s libboost-iostreams-dev libboost-iostreams1.88-dev libboost-iostreams1.88.0 103s libboost-math-dev libboost-math1.88-dev libboost-math1.88.0 libboost-mpi-dev 103s libboost-mpi1.88-dev libboost-mpi1.88.0 libboost-program-options-dev 103s libboost-program-options1.88-dev libboost-program-options1.88.0 103s libboost-random1.88-dev libboost-random1.88.0 libboost-regex1.88-dev 103s libboost-regex1.88.0 libboost-serialization-dev 103s libboost-serialization1.88-dev libboost-serialization1.88.0 103s libboost-system1.88-dev libboost-system1.88.0 libboost-test1.88-dev 103s libboost-test1.88.0 libboost-thread-dev libboost-thread1.88-dev 103s libboost-thread1.88.0 libboost-timer-dev libboost-timer1.88-dev 103s libboost-timer1.88.0 libboost1.88-dev libbrotli-dev libbtf2 libc-dev-bin 103s libc6-dbg libc6-dev libcamd3 libcc1-0 libccolamd3 libcholmod5 libcolamd3 103s libcombblas2.0.0t64 libcrypt-dev libcurl4-openssl-dev libcxsparse4 103s libdebhelper-perl libdolfinx-dev libdolfinx-real-dev libdolfinx-real0.10 103s libeigen3-dev libevent-2.1-7t64 libevent-dev libevent-extra-2.1-7t64 103s libevent-openssl-2.1-7t64 libevent-pthreads-2.1-7t64 libexpat1-dev 103s libfabric1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 103s libfftw3-mpi-dev libfftw3-mpi3 libfftw3-quad3 libfftw3-single3 103s libfile-stripnondeterminism-perl libfmt-dev libfmt10 libgcc-15-dev 103s libgfortran-15-dev libgfortran5 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64 103s libgnutls-openssl27t64 libgnutls28-dev libgomp1 libgssrpc4t64 103s libhdf5-mpi-dev libhdf5-openmpi-310 libhdf5-openmpi-cpp-310 103s libhdf5-openmpi-dev libhdf5-openmpi-fortran-310 libhdf5-openmpi-hl-310 103s libhdf5-openmpi-hl-cpp-310 libhdf5-openmpi-hl-fortran-310 libhsa-runtime64-1 103s libhsakmt1 libhwasan0 libhwloc-dev libhwloc-plugins libhwloc15 103s libhypre-3.0.0 libhypre-dev libibmad5 libibumad3 libibverbs-dev libicu-dev 103s libidn2-dev libisl23 libitm1 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 103s libjpeg8 libjpeg8-dev libjs-jquery libjs-jquery-ui libjs-mathjax 103s libjsoncpp26 libkadm5clnt-mit12 libkadm5srv-mit12 libkdb5-10t64 libklu2 103s libkrb5-dev liblapack-dev liblapack3 libldap-dev libldl3 liblsan0 103s libltdl-dev libltdl7 liblzma-dev libmetis5 libmpc3 libmumps-5.8 libmumps-dev 103s libmumps-headers-dev libnghttp2-dev libnl-3-dev libnl-route-3-dev 103s libnorm1t64 libnuma-dev libopenmpi-dev libopenmpi40 libp11-kit-dev 103s libparpack2-dev libparpack2t64 libparu1 libpciaccess0 libpetsc-real3.24 103s libpetsc-real3.24-dev libpetsc3.24-dev-common libpgm-5.3-0t64 libpkgconf3 103s libpsl-dev libpsm2-2 libptscotch-7.0c libptscotch-dev libptscotcherr-7.0 103s libptscotcherr-dev libpugixml-dev libpugixml1v5 libpython3-dev 103s libpython3.13-dev libquadmath0 librbio4 librdmacm1t64 librhash1 librtmp-dev 103s libscalapack-mpi-dev libscalapack-openmpi-dev libscalapack-openmpi2.2 103s libscotch-7.0c libscotch-dev libscotcherr-7.0 libscotcherr-dev 103s libslepc-real3.24 libslepc-real3.24-dev libsodium23 libspdlog-dev 103s libspdlog1.15 libspex3 libspqr4 libssh2-1-dev libssl-dev libstdc++-15-dev 103s libsuitesparse-dev libsuitesparse-mongoose3 libsuitesparseconfig7 103s libsuperlu-dev libsuperlu-dist-dev libsuperlu-dist9 libsuperlu7 libsz2 103s libtasn1-6-dev libtool libtsan2 libubsan1 libucx0 libumfpack6 libunbound8 103s libx11-dev libxau-dev libxcb1-dev libxdmcp-dev libxml2-dev libxnvctrl0 103s libyaml-cpp0.8 libyaml-dev libze1 libzfp1t64 libzmq5 libzstd-dev 103s linux-libc-dev m4 mpi-default-bin mpi-default-dev nanobind-dev nettle-dev 103s ocl-icd-libopencl1 ocl-icd-opencl-dev opencl-c-headers opencl-clhpp-headers 103s openmpi-bin openmpi-common pkgconf pkgconf-bin po-debconf python3-basix 103s python3-cffi python3-dev python3-ffcx python3-nanobind python3-numpy 103s python3-numpy-dev python3-ply python3-pycparser python3-ufl python3.13-dev 103s robin-map-dev rpcsvc-proto valgrind valgrind-mpi x11proto-dev 103s xorg-sgml-doctools xtrans-dev zlib1g-dev 103s 0 upgraded, 312 newly installed, 0 to remove and 0 not upgraded. 103s Need to get 317 MB of archives. 103s After this operation, 1349 MB of additional disk space will be used. 103s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-numpy-dev amd64 1:2.3.5+ds-3 [147 kB] 103s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7ubuntu1 [260 kB] 103s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 15.2.0-12ubuntu1 [939 kB] 103s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7ubuntu1 [2739 kB] 103s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-numpy amd64 1:2.3.5+ds-3 [8129 kB] 103s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 m4 amd64 1.4.20-2 [217 kB] 103s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 autoconf all 2.72-3.1ubuntu1 [384 kB] 103s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 autotools-dev all 20240727.1 [43.4 kB] 103s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 automake all 1:1.18.1-3build1 [582 kB] 103s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 autopoint all 0.23.2-1 [620 kB] 103s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 libc-dev-bin amd64 2.42-2ubuntu4 [23.3 kB] 104s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 linux-libc-dev amd64 6.18.0-9.9 [1860 kB] 104s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libcrypt-dev amd64 1:4.5.1-1 [122 kB] 104s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 rpcsvc-proto amd64 1.4.3-1 [68.7 kB] 104s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libc6-dev amd64 2.42-2ubuntu4 [2207 kB] 104s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 libisl23 amd64 0.27-1build1 [691 kB] 104s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 libmpc3 amd64 1.3.1-2 [54.8 kB] 104s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [12.9 MB] 104s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15 amd64 15.2.0-12ubuntu1 [1034 B] 104s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [5746 B] 104s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp amd64 4:15.2.0-4ubuntu1 [22.4 kB] 104s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 libcc1-0 amd64 15.2.0-12ubuntu1 [47.4 kB] 104s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 15.2.0-12ubuntu1 [151 kB] 104s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 libitm1 amd64 15.2.0-12ubuntu1 [29.5 kB] 104s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libasan8 amd64 15.2.0-12ubuntu1 [3070 kB] 104s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsan0 amd64 15.2.0-12ubuntu1 [1360 kB] 104s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 libtsan2 amd64 15.2.0-12ubuntu1 [2757 kB] 104s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 libubsan1 amd64 15.2.0-12ubuntu1 [1210 kB] 104s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libhwasan0 amd64 15.2.0-12ubuntu1 [1685 kB] 104s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 libquadmath0 amd64 15.2.0-12ubuntu1 [153 kB] 104s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-15-dev amd64 15.2.0-12ubuntu1 [2866 kB] 104s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [25.4 MB] 105s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15 amd64 15.2.0-12ubuntu1 [530 kB] 105s Get:34 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1208 B] 105s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc amd64 4:15.2.0-4ubuntu1 [5024 B] 105s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++-15-dev amd64 15.2.0-12ubuntu1 [2553 kB] 105s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [14.4 MB] 105s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15 amd64 15.2.0-12ubuntu1 [25.3 kB] 105s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [966 B] 105s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 g++ amd64 4:15.2.0-4ubuntu1 [1100 B] 105s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 build-essential amd64 12.12ubuntu2 [5256 B] 105s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 cmake-data all 4.1.1+really3.31.6-2ubuntu1 [2329 kB] 105s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 libjsoncpp26 amd64 1.9.6-5 [84.0 kB] 105s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 librhash1 amd64 1.4.6-1.1 [133 kB] 105s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 cmake amd64 4.1.1+really3.31.6-2ubuntu1 [12.9 MB] 105s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libdebhelper-perl all 13.28ubuntu1 [97.4 kB] 105s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libtool all 2.5.4-9 [169 kB] 105s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 dh-autoreconf all 21 [12.5 kB] 105s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libarchive-zip-perl all 1.68-1 [90.2 kB] 105s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1build1 [20.6 kB] 105s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 dh-strip-nondeterminism all 1.15.0-1build1 [5110 B] 105s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 debugedit amd64 1:5.2-3 [49.9 kB] 105s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 dwz amd64 0.16-2 [115 kB] 105s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 gettext amd64 0.23.2-1 [1019 kB] 105s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 intltool-debian all 0.35.0+20060710.6build1 [24.1 kB] 105s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 po-debconf all 1.0.22 [215 kB] 105s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 debhelper all 13.28ubuntu1 [916 kB] 105s Get:58 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 libbasix0.10 amd64 0.10.0.post0-2build1 [424 kB] 105s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-program-options1.88.0 amd64 1.88.0-1.4ubuntu3 [325 kB] 105s Get:60 http://ftpmaster.internal/ubuntu resolute/universe amd64 libadios2-mpi-c-2.10 amd64 2.10.2+dfsg1-5build2 [59.1 kB] 105s Get:61 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10build1 [8360 B] 105s Get:62 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpsm2-2 amd64 11.2.185-2.1 [193 kB] 105s Get:63 http://ftpmaster.internal/ubuntu resolute/main amd64 librdmacm1t64 amd64 61.0-2ubuntu1 [73.7 kB] 105s Get:64 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfabric1 amd64 2.1.0-1.1 [697 kB] 105s Get:65 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhwloc15 amd64 2.12.2-1 [181 kB] 105s Get:66 http://ftpmaster.internal/ubuntu resolute/universe amd64 libamd-comgr3 amd64 7.1.0+dfsg-0ubuntu2 [15.2 MB] 106s Get:67 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhsakmt1 amd64 6.4.3+dfsg-3 [67.5 kB] 106s Get:68 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhsa-runtime64-1 amd64 6.4.3+dfsg-3 [630 kB] 106s Get:69 http://ftpmaster.internal/ubuntu resolute/universe amd64 libamdhip64-6 amd64 6.4.3-4 [10.3 MB] 106s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 libibumad3 amd64 61.0-2ubuntu1 [31.5 kB] 106s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 libibmad5 amd64 61.0-2ubuntu1 [44.2 kB] 106s Get:72 http://ftpmaster.internal/ubuntu resolute/universe amd64 libucx0 amd64 1.20.0+ds-4ubuntu1 [951 kB] 106s Get:73 http://ftpmaster.internal/ubuntu resolute/main amd64 libpciaccess0 amd64 0.18.1-1ubuntu2 [19.0 kB] 106s Get:74 http://ftpmaster.internal/ubuntu resolute/main amd64 libxnvctrl0 amd64 510.47.03-0ubuntu7 [13.2 kB] 106s Get:75 http://ftpmaster.internal/ubuntu resolute/universe amd64 libze1 amd64 1.27.0-1 [630 kB] 106s Get:76 http://ftpmaster.internal/ubuntu resolute/main amd64 ocl-icd-libopencl1 amd64 2.3.4-1 [40.9 kB] 106s Get:77 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhwloc-plugins amd64 2.12.2-1 [22.2 kB] 106s Get:78 http://ftpmaster.internal/ubuntu resolute/universe amd64 libopenmpi40 amd64 5.0.8-8ubuntu1 [3384 kB] 106s Get:79 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsz2 amd64 1.1.5-1 [17.9 kB] 106s Get:80 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-openmpi-310 amd64 1.14.6+repack-2 [1492 kB] 106s Get:81 http://ftpmaster.internal/ubuntu resolute/universe amd64 libadios2-mpi-auxiliary-2.10 amd64 2.10.2+dfsg1-5build2 [444 kB] 106s Get:82 http://ftpmaster.internal/ubuntu resolute/universe amd64 libblosc2-6 amd64 2.22.0+ds-1 [176 kB] 106s Get:83 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpugixml1v5 amd64 1.14-2build1 [96.4 kB] 106s Get:84 http://ftpmaster.internal/ubuntu resolute/main amd64 libyaml-cpp0.8 amd64 0.8.0+dfsg-9 [118 kB] 106s Get:85 http://ftpmaster.internal/ubuntu resolute/universe amd64 libzfp1t64 amd64 1.0.1-4build4 [64.5 kB] 106s Get:86 http://ftpmaster.internal/ubuntu resolute/universe amd64 libnorm1t64 amd64 1.5.9+dfsg-4 [158 kB] 106s Get:87 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpgm-5.3-0t64 amd64 5.3.128~dfsg-2.1build2 [168 kB] 106s Get:88 http://ftpmaster.internal/ubuntu resolute/main amd64 libsodium23 amd64 1.0.18-2 [165 kB] 106s Get:89 http://ftpmaster.internal/ubuntu resolute/universe amd64 libzmq5 amd64 4.3.5-1build3 [262 kB] 106s Get:90 http://ftpmaster.internal/ubuntu resolute/universe amd64 libadios2-mpi-plugins amd64 2.10.2+dfsg1-5build2 [9508 B] 106s Get:91 http://ftpmaster.internal/ubuntu resolute/universe amd64 libadios2-mpi-core-2.10 amd64 2.10.2+dfsg1-5build2 [1721 kB] 106s Get:92 http://ftpmaster.internal/ubuntu resolute/universe amd64 libadios2-mpi-c++11-2.10 amd64 2.10.2+dfsg1-5build2 [208 kB] 106s Get:93 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfmt10 amd64 10.1.1+ds1-4build1 [75.6 kB] 106s Get:94 http://ftpmaster.internal/ubuntu resolute/main amd64 libsuitesparseconfig7 amd64 1:7.12.1+dfsg-1 [22.0 kB] 106s Get:95 http://ftpmaster.internal/ubuntu resolute/universe amd64 libamd3 amd64 1:7.12.1+dfsg-1 [35.8 kB] 106s Get:96 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcamd3 amd64 1:7.12.1+dfsg-1 [32.3 kB] 106s Get:97 http://ftpmaster.internal/ubuntu resolute/universe amd64 libccolamd3 amd64 1:7.12.1+dfsg-1 [34.5 kB] 106s Get:98 http://ftpmaster.internal/ubuntu resolute/main amd64 libcolamd3 amd64 1:7.12.1+dfsg-1 [27.4 kB] 106s Get:99 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcholmod5 amd64 1:7.12.1+dfsg-1 [717 kB] 106s Get:100 http://ftpmaster.internal/ubuntu resolute/main amd64 libfftw3-double3 amd64 3.3.10-2fakesync1build2 [860 kB] 106s Get:101 http://ftpmaster.internal/ubuntu resolute/main amd64 libfftw3-long3 amd64 3.3.10-2fakesync1build2 [398 kB] 106s Get:102 http://ftpmaster.internal/ubuntu resolute/main amd64 libfftw3-single3 amd64 3.3.10-2fakesync1build2 [894 kB] 106s Get:103 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfftw3-mpi3 amd64 3.3.10-2fakesync1build2 [58.6 kB] 106s Get:104 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcombblas2.0.0t64 amd64 2.0.0-7 [249 kB] 106s Get:105 http://ftpmaster.internal/ubuntu resolute/universe amd64 libmetis5 amd64 5.1.0.dfsg-8 [182 kB] 106s Get:106 http://ftpmaster.internal/ubuntu resolute/universe amd64 libptscotcherr-7.0 amd64 7.0.10-7ubuntu4 [13.5 kB] 106s Get:107 http://ftpmaster.internal/ubuntu resolute/universe amd64 libscotcherr-7.0 amd64 7.0.10-7ubuntu4 [13.5 kB] 106s Get:108 http://ftpmaster.internal/ubuntu resolute/universe amd64 libscotch-7.0c amd64 7.0.10-7ubuntu4 [259 kB] 106s Get:109 http://ftpmaster.internal/ubuntu resolute/universe amd64 libptscotch-7.0c amd64 7.0.10-7ubuntu4 [161 kB] 106s Get:110 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsuperlu-dist9 amd64 9.2.1+dfsg1-1 [767 kB] 106s Get:111 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhypre-3.0.0 amd64 3.0.0-5 [2086 kB] 106s Get:112 http://ftpmaster.internal/ubuntu resolute/universe amd64 libbtf2 amd64 1:7.12.1+dfsg-1 [22.8 kB] 106s Get:113 http://ftpmaster.internal/ubuntu resolute/universe amd64 libklu2 amd64 1:7.12.1+dfsg-1 [89.4 kB] 106s Get:114 http://ftpmaster.internal/ubuntu resolute/universe amd64 openmpi-common all 5.0.8-8ubuntu1 [108 kB] 106s Get:115 http://ftpmaster.internal/ubuntu resolute/universe amd64 openmpi-bin amd64 5.0.8-8ubuntu1 [201 kB] 106s Get:116 http://ftpmaster.internal/ubuntu resolute/universe amd64 mpi-default-bin amd64 1.20 [2658 B] 106s Get:117 http://ftpmaster.internal/ubuntu resolute/universe amd64 libscalapack-openmpi2.2 amd64 2.2.2-5 [1839 kB] 107s Get:118 http://ftpmaster.internal/ubuntu resolute/universe amd64 libmumps-5.8 amd64 5.8.1-2ubuntu1 [2000 kB] 107s Get:119 http://ftpmaster.internal/ubuntu resolute/universe amd64 libspqr4 amd64 1:7.12.1+dfsg-1 [149 kB] 107s Get:120 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsuperlu7 amd64 7.0.1+dfsg1-2 [186 kB] 107s Get:121 http://ftpmaster.internal/ubuntu resolute/universe amd64 libumfpack6 amd64 1:7.12.1+dfsg-1 [298 kB] 107s Get:122 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpetsc-real3.24 amd64 3.24.3+dfsg1-1ubuntu1 [7886 kB] 107s Get:123 http://ftpmaster.internal/ubuntu resolute/universe amd64 libarpack2t64 amd64 3.9.1-6 [108 kB] 107s Get:124 http://ftpmaster.internal/ubuntu resolute/universe amd64 libparpack2t64 amd64 3.9.1-6 [98.7 kB] 107s Get:125 http://ftpmaster.internal/ubuntu resolute/universe amd64 libslepc-real3.24 amd64 3.24.2+dfsg1-1 [1369 kB] 107s Get:126 http://ftpmaster.internal/ubuntu resolute/universe amd64 libspdlog1.15 amd64 1:1.15.3+ds-1 [117 kB] 107s Get:127 http://ftpmaster.internal/ubuntu resolute/universe amd64 libdolfinx-real0.10 amd64 1:0.10.0.post5-4 [676 kB] 107s Get:128 http://ftpmaster.internal/ubuntu resolute/universe amd64 fenicsx-performance-tests amd64 0.10.0-2 [315 kB] 107s Get:129 http://ftpmaster.internal/ubuntu resolute/universe amd64 fenicsx-performance-tests-source all 0.10.0-2 [17.3 kB] 107s Get:130 http://ftpmaster.internal/ubuntu resolute/main amd64 fonts-mathjax all 2.7.9+dfsg-1build1 [2283 kB] 107s Get:131 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran-15-dev amd64 15.2.0-12ubuntu1 [973 kB] 107s Get:132 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15-x86-64-linux-gnu amd64 15.2.0-12ubuntu1 [13.6 MB] 107s Get:133 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-15 amd64 15.2.0-12ubuntu1 [18.1 kB] 107s Get:134 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1014 B] 107s Get:135 http://ftpmaster.internal/ubuntu resolute/main amd64 gfortran amd64 4:15.2.0-4ubuntu1 [1172 B] 107s Get:136 http://ftpmaster.internal/ubuntu resolute/main amd64 icu-devtools amd64 78.2-1ubuntu1 [214 kB] 107s Get:137 http://ftpmaster.internal/ubuntu resolute/main amd64 comerr-dev amd64 2.1-1.47.2-3ubuntu2 [45.0 kB] 107s Get:138 http://ftpmaster.internal/ubuntu resolute/main amd64 libgssrpc4t64 amd64 1.22.1-2 [57.9 kB] 107s Get:139 http://ftpmaster.internal/ubuntu resolute/main amd64 libkadm5clnt-mit12 amd64 1.22.1-2 [40.2 kB] 107s Get:140 http://ftpmaster.internal/ubuntu resolute/main amd64 libkdb5-10t64 amd64 1.22.1-2 [41.6 kB] 107s Get:141 http://ftpmaster.internal/ubuntu resolute/main amd64 libkadm5srv-mit12 amd64 1.22.1-2 [55.0 kB] 107s Get:142 http://ftpmaster.internal/ubuntu resolute/main amd64 krb5-multidev amd64 1.22.1-2 [126 kB] 107s Get:143 http://ftpmaster.internal/ubuntu resolute/universe amd64 libadios2-common-c++11-dev all 2.10.2+dfsg1-5build2 [21.5 kB] 107s Get:144 http://ftpmaster.internal/ubuntu resolute/universe amd64 libadios2-common-core-dev amd64 2.10.2+dfsg1-5build2 [121 kB] 107s Get:145 http://ftpmaster.internal/ubuntu resolute/universe amd64 libadios2-mpi-auxiliary-dev amd64 2.10.2+dfsg1-5build2 [17.1 kB] 107s Get:146 http://ftpmaster.internal/ubuntu resolute/universe amd64 libadios2-mpi-core-dev amd64 2.10.2+dfsg1-5build2 [74.7 kB] 107s Get:147 http://ftpmaster.internal/ubuntu resolute/universe amd64 libadios2-mpi-c++11-dev amd64 2.10.2+dfsg1-5build2 [4848 B] 107s Get:148 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec0 amd64 1.1.5-1 [22.5 kB] 107s Get:149 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas-dev amd64 3.12.1-7ubuntu1 [235 kB] 107s Get:150 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack-dev amd64 3.12.1-7ubuntu1 [5433 kB] 108s Get:151 http://ftpmaster.internal/ubuntu resolute/universe amd64 libarpack2-dev amd64 3.9.1-6 [123 kB] 108s Get:152 http://ftpmaster.internal/ubuntu resolute/main amd64 libpkgconf3 amd64 1.8.1-4build1 [32.8 kB] 108s Get:153 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf-bin amd64 1.8.1-4build1 [21.7 kB] 108s Get:154 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf amd64 1.8.1-4build1 [16.8 kB] 108s Get:155 http://ftpmaster.internal/ubuntu resolute/universe amd64 libeigen3-dev all 3.4.0-5 [1056 kB] 108s Get:156 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 libbasix-dev amd64 0.10.0.post0-2build1 [65.5 kB] 108s Get:157 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost1.88-dev amd64 1.88.0-1.4ubuntu3 [11.3 MB] 108s Get:158 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-atomic1.88.0 amd64 1.88.0-1.4ubuntu3 [243 kB] 108s Get:159 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-atomic1.88-dev amd64 1.88.0-1.4ubuntu3 [236 kB] 108s Get:160 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-chrono1.88.0 amd64 1.88.0-1.4ubuntu3 [247 kB] 108s Get:161 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-chrono1.88-dev amd64 1.88.0-1.4ubuntu3 [248 kB] 108s Get:162 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-chrono-dev amd64 1.88.0.0ubuntu3 [4994 B] 108s Get:163 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-container1.88.0 amd64 1.88.0-1.4ubuntu3 [265 kB] 108s Get:164 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-container1.88-dev amd64 1.88.0-1.4ubuntu3 [269 kB] 108s Get:165 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-date-time1.88.0 amd64 1.88.0-1.4ubuntu3 [239 kB] 108s Get:166 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-serialization1.88.0 amd64 1.88.0-1.4ubuntu3 [347 kB] 108s Get:167 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-serialization1.88-dev amd64 1.88.0-1.4ubuntu3 [388 kB] 108s Get:168 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-date-time1.88-dev amd64 1.88.0-1.4ubuntu3 [239 kB] 108s Get:169 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-dev amd64 1.88.0.0ubuntu3 [4634 B] 108s Get:170 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-filesystem1.88.0 amd64 1.88.0-1.4ubuntu3 [292 kB] 108s Get:171 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-system1.88.0 amd64 1.88.0-1.4ubuntu3 [239 kB] 108s Get:172 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-system1.88-dev amd64 1.88.0-1.4ubuntu3 [232 kB] 108s Get:173 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-filesystem1.88-dev amd64 1.88.0-1.4ubuntu3 [307 kB] 108s Get:174 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-filesystem-dev amd64 1.88.0.0ubuntu3 [4434 B] 108s Get:175 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-graph1.88.0 amd64 1.88.0-1.4ubuntu3 [369 kB] 108s Get:176 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-regex1.88.0 amd64 1.88.0-1.4ubuntu3 [347 kB] 108s Get:177 http://ftpmaster.internal/ubuntu resolute/main amd64 libicu-dev amd64 78.2-1ubuntu1 [12.5 MB] 108s Get:178 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-regex1.88-dev amd64 1.88.0-1.4ubuntu3 [360 kB] 108s Get:179 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-test1.88.0 amd64 1.88.0-1.4ubuntu3 [462 kB] 108s Get:180 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-test1.88-dev amd64 1.88.0-1.4ubuntu3 [570 kB] 108s Get:181 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-graph1.88-dev amd64 1.88.0-1.4ubuntu3 [400 kB] 108s Get:182 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-random1.88.0 amd64 1.88.0-1.4ubuntu3 [245 kB] 108s Get:183 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-random1.88-dev amd64 1.88.0-1.4ubuntu3 [242 kB] 108s Get:184 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-iostreams1.88.0 amd64 1.88.0-1.4ubuntu3 [262 kB] 108s Get:185 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-iostreams1.88-dev amd64 1.88.0-1.4ubuntu3 [265 kB] 108s Get:186 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-iostreams-dev amd64 1.88.0.0ubuntu3 [4370 B] 108s Get:187 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-math1.88.0 amd64 1.88.0-1.4ubuntu3 [440 kB] 108s Get:188 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-math1.88-dev amd64 1.88.0-1.4ubuntu3 [602 kB] 108s Get:189 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-math-dev amd64 1.88.0.0ubuntu3 [4590 B] 108s Get:190 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-mpi1.88.0 amd64 1.88.0-1.4ubuntu3 [272 kB] 108s Get:191 http://ftpmaster.internal/ubuntu resolute/main amd64 libnl-3-dev amd64 3.11.0-2 [103 kB] 108s Get:192 http://ftpmaster.internal/ubuntu resolute/main amd64 libnl-route-3-dev amd64 3.11.0-2 [229 kB] 108s Get:193 http://ftpmaster.internal/ubuntu resolute/main amd64 libibverbs-dev amd64 61.0-2ubuntu1 [720 kB] 109s Get:194 http://ftpmaster.internal/ubuntu resolute/main amd64 libnuma-dev amd64 2.0.19-1 [37.3 kB] 109s Get:195 http://ftpmaster.internal/ubuntu resolute/main amd64 libltdl7 amd64 2.5.4-9 [43.7 kB] 109s Get:196 http://ftpmaster.internal/ubuntu resolute/main amd64 libltdl-dev amd64 2.5.4-9 [173 kB] 109s Get:197 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhwloc-dev amd64 2.12.2-1 [283 kB] 109s Get:198 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10build1 [155 kB] 109s Get:199 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-extra-2.1-7t64 amd64 2.1.12-stable-10build1 [68.1 kB] 109s Get:200 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-openssl-2.1-7t64 amd64 2.1.12-stable-10build1 [16.7 kB] 109s Get:201 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-dev amd64 2.1.12-stable-10build1 [288 kB] 109s Get:202 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1build1 [321 kB] 109s Get:203 http://ftpmaster.internal/ubuntu resolute/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1build1 [251 kB] 109s Get:204 http://ftpmaster.internal/ubuntu resolute/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu2 [898 kB] 109s Get:205 http://ftpmaster.internal/ubuntu resolute/universe amd64 libopenmpi-dev amd64 5.0.8-8ubuntu1 [1226 kB] 109s Get:206 http://ftpmaster.internal/ubuntu resolute/universe amd64 mpi-default-dev amd64 1.20 [3456 B] 109s Get:207 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-mpi1.88-dev amd64 1.88.0-1.4ubuntu3 [297 kB] 109s Get:208 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-mpi-dev amd64 1.88.0.0ubuntu3 [4474 B] 109s Get:209 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-program-options1.88-dev amd64 1.88.0-1.4ubuntu3 [390 kB] 109s Get:210 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-program-options-dev amd64 1.88.0.0ubuntu3 [4420 B] 109s Get:211 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-serialization-dev amd64 1.88.0.0ubuntu3 [4610 B] 109s Get:212 http://ftpmaster.internal/ubuntu resolute/main amd64 libboost-thread1.88.0 amd64 1.88.0-1.4ubuntu3 [273 kB] 109s Get:213 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-thread1.88-dev amd64 1.88.0-1.4ubuntu3 [276 kB] 109s Get:214 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-thread-dev amd64 1.88.0.0ubuntu3 [4410 B] 109s Get:215 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-timer1.88.0 amd64 1.88.0-1.4ubuntu3 [243 kB] 109s Get:216 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-timer1.88-dev amd64 1.88.0-1.4ubuntu3 [237 kB] 109s Get:217 http://ftpmaster.internal/ubuntu resolute/universe amd64 libboost-timer-dev amd64 1.88.0.0ubuntu3 [4510 B] 109s Get:218 http://ftpmaster.internal/ubuntu resolute/main amd64 libbrotli-dev amd64 1.1.0-2build6 [355 kB] 109s Get:219 http://ftpmaster.internal/ubuntu resolute/main amd64 libidn2-dev amd64 2.3.8-4 [123 kB] 109s Get:220 http://ftpmaster.internal/ubuntu resolute/main amd64 libkrb5-dev amd64 1.22.1-2 [11.9 kB] 109s Get:221 http://ftpmaster.internal/ubuntu resolute/main amd64 libldap-dev amd64 2.6.10+dfsg-1ubuntu5 [315 kB] 109s Get:222 http://ftpmaster.internal/ubuntu resolute/main amd64 libnghttp2-dev amd64 1.64.0-1.1ubuntu1 [120 kB] 109s Get:223 http://ftpmaster.internal/ubuntu resolute/main amd64 libpsl-dev amd64 0.21.2-1.1build2 [78.7 kB] 109s Get:224 http://ftpmaster.internal/ubuntu resolute/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-5ubuntu1 [9956 B] 109s Get:225 http://ftpmaster.internal/ubuntu resolute/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-5ubuntu1 [342 kB] 109s Get:226 http://ftpmaster.internal/ubuntu resolute/main amd64 libunbound8 amd64 1.24.2-1ubuntu1 [462 kB] 109s Get:227 http://ftpmaster.internal/ubuntu resolute/main amd64 libgnutls-dane0t64 amd64 3.8.10-3ubuntu1 [24.5 kB] 109s Get:228 http://ftpmaster.internal/ubuntu resolute/main amd64 libgnutls-openssl27t64 amd64 3.8.10-3ubuntu1 [24.8 kB] 109s Get:229 http://ftpmaster.internal/ubuntu resolute/main amd64 libp11-kit-dev amd64 0.25.10-1 [29.3 kB] 109s Get:230 http://ftpmaster.internal/ubuntu resolute/main amd64 libtasn1-6-dev amd64 4.21.0-2 [92.4 kB] 109s Get:231 http://ftpmaster.internal/ubuntu resolute/main amd64 nettle-dev amd64 3.10.2-1 [1176 kB] 109s Get:232 http://ftpmaster.internal/ubuntu resolute/main amd64 libgnutls28-dev amd64 3.8.10-3ubuntu1 [1096 kB] 109s Get:233 http://ftpmaster.internal/ubuntu resolute/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-3 [69.2 kB] 109s Get:234 http://ftpmaster.internal/ubuntu resolute/main amd64 libssl-dev amd64 3.5.3-1ubuntu2 [2936 kB] 109s Get:235 http://ftpmaster.internal/ubuntu resolute/main amd64 libssh2-1-dev amd64 1.11.1-1build1 [288 kB] 109s Get:236 http://ftpmaster.internal/ubuntu resolute/main amd64 libzstd-dev amd64 1.5.7+dfsg-2 [376 kB] 109s Get:237 http://ftpmaster.internal/ubuntu resolute/main amd64 libcurl4-openssl-dev amd64 8.18.0-1ubuntu1 [543 kB] 109s Get:238 http://ftpmaster.internal/ubuntu resolute/universe amd64 libcxsparse4 amd64 1:7.12.1+dfsg-1 [82.4 kB] 109s Get:239 http://ftpmaster.internal/ubuntu resolute/main amd64 libjs-mathjax all 2.7.9+dfsg-1build1 [6017 kB] 109s Get:240 http://ftpmaster.internal/ubuntu resolute/universe amd64 libldl3 amd64 1:7.12.1+dfsg-1 [23.0 kB] 109s Get:241 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsuitesparse-mongoose3 amd64 1:7.12.1+dfsg-1 [42.8 kB] 109s Get:242 http://ftpmaster.internal/ubuntu resolute/universe amd64 librbio4 amd64 1:7.12.1+dfsg-1 [34.3 kB] 109s Get:243 http://ftpmaster.internal/ubuntu resolute/universe amd64 libspex3 amd64 1:7.12.1+dfsg-1 [55.2 kB] 109s Get:244 http://ftpmaster.internal/ubuntu resolute/universe amd64 libparu1 amd64 1:7.12.1+dfsg-1 [61.6 kB] 109s Get:245 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsuitesparse-dev amd64 1:7.12.1+dfsg-1 [1631 kB] 109s Get:246 http://ftpmaster.internal/ubuntu resolute/universe amd64 libptscotcherr-dev amd64 7.0.10-7ubuntu4 [4094 B] 109s Get:247 http://ftpmaster.internal/ubuntu resolute/universe amd64 libscotcherr-dev amd64 7.0.10-7ubuntu4 [4090 B] 109s Get:248 http://ftpmaster.internal/ubuntu resolute/universe amd64 libscotch-dev amd64 7.0.10-7ubuntu4 [1312 kB] 109s Get:249 http://ftpmaster.internal/ubuntu resolute/universe amd64 libptscotch-dev amd64 7.0.10-7ubuntu4 [807 kB] 109s Get:250 http://ftpmaster.internal/ubuntu resolute/universe amd64 libscalapack-openmpi-dev amd64 2.2.2-5 [7488 B] 109s Get:251 http://ftpmaster.internal/ubuntu resolute/universe amd64 libscalapack-mpi-dev amd64 2.2.2-5 [2314 B] 109s Get:252 http://ftpmaster.internal/ubuntu resolute/main amd64 libfftw3-quad3 amd64 3.3.10-2fakesync1build2 [676 kB] 109s Get:253 http://ftpmaster.internal/ubuntu resolute/main amd64 libfftw3-bin amd64 3.3.10-2fakesync1build2 [40.3 kB] 109s Get:254 http://ftpmaster.internal/ubuntu resolute/main amd64 libfftw3-dev amd64 3.3.10-2fakesync1build2 [2393 kB] 109s Get:255 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfftw3-mpi-dev amd64 3.3.10-2fakesync1build2 [66.8 kB] 109s Get:256 http://ftpmaster.internal/ubuntu resolute/main amd64 opencl-c-headers all 3.0~2025.07.22-2build1 [49.4 kB] 109s Get:257 http://ftpmaster.internal/ubuntu resolute/main amd64 opencl-clhpp-headers all 3.0~2025.07.22-1ubuntu1 [52.2 kB] 109s Get:258 http://ftpmaster.internal/ubuntu resolute/main amd64 ocl-icd-opencl-dev amd64 2.3.4-1 [2806 B] 109s Get:259 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-openmpi-fortran-310 amd64 1.14.6+repack-2 [107 kB] 109s Get:260 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-openmpi-hl-310 amd64 1.14.6+repack-2 [59.9 kB] 109s Get:261 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-openmpi-hl-fortran-310 amd64 1.14.6+repack-2 [32.0 kB] 109s Get:262 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-openmpi-cpp-310 amd64 1.14.6+repack-2 [125 kB] 109s Get:263 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-openmpi-hl-cpp-310 amd64 1.14.6+repack-2 [11.9 kB] 109s Get:264 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec-dev amd64 1.1.5-1 [23.5 kB] 109s Get:265 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8 amd64 2.1.5-4ubuntu2 [152 kB] 109s Get:266 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8-dev amd64 2.1.5-4ubuntu2 [296 kB] 109s Get:267 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 109s Get:268 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 109s Get:269 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 109s Get:270 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-openmpi-dev amd64 1.14.6+repack-2 [3489 kB] 109s Get:271 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-mpi-dev amd64 1.14.6+repack-2 [5256 B] 109s Get:272 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsuperlu-dev amd64 7.0.1+dfsg1-2 [20.8 kB] 109s Get:273 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsuperlu-dist-dev amd64 9.2.1+dfsg1-1 [853 kB] 109s Get:274 http://ftpmaster.internal/ubuntu resolute/main amd64 xorg-sgml-doctools all 1:1.11-1.1build1 [10.3 kB] 110s Get:275 http://ftpmaster.internal/ubuntu resolute/main amd64 x11proto-dev all 2024.1-1build1 [606 kB] 110s Get:276 http://ftpmaster.internal/ubuntu resolute/main amd64 libxau-dev amd64 1:1.0.11-1build1 [10.0 kB] 110s Get:277 http://ftpmaster.internal/ubuntu resolute/main amd64 libxdmcp-dev amd64 1:1.1.5-2 [25.7 kB] 110s Get:278 http://ftpmaster.internal/ubuntu resolute/main amd64 xtrans-dev all 1.6.0-1 [66.1 kB] 110s Get:279 http://ftpmaster.internal/ubuntu resolute/main amd64 libxcb1-dev amd64 1.17.0-2ubuntu1 [86.3 kB] 110s Get:280 http://ftpmaster.internal/ubuntu resolute/main amd64 libx11-dev amd64 2:1.8.12-1build1 [765 kB] 110s Get:281 http://ftpmaster.internal/ubuntu resolute/main amd64 libyaml-dev amd64 0.2.5-2build2 [65.9 kB] 110s Get:282 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpetsc3.24-dev-common all 3.24.3+dfsg1-1ubuntu1 [323 kB] 110s Get:283 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhypre-dev amd64 3.0.0-5 [2553 kB] 110s Get:284 http://ftpmaster.internal/ubuntu resolute/universe amd64 libmumps-headers-dev all 5.8.1-2ubuntu1 [21.6 kB] 110s Get:285 http://ftpmaster.internal/ubuntu resolute/universe amd64 libmumps-dev amd64 5.8.1-2ubuntu1 [1966 kB] 110s Get:286 http://ftpmaster.internal/ubuntu resolute/main amd64 libc6-dbg amd64 2.42-2ubuntu4 [6149 kB] 110s Get:287 http://ftpmaster.internal/ubuntu resolute/main amd64 valgrind amd64 1:3.25.1-3ubuntu1 [15.6 MB] 110s Get:288 http://ftpmaster.internal/ubuntu resolute/universe amd64 valgrind-mpi amd64 1:3.25.1-3ubuntu1 [43.7 kB] 110s Get:289 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpetsc-real3.24-dev amd64 3.24.3+dfsg1-1ubuntu1 [13.5 MB] 111s Get:290 http://ftpmaster.internal/ubuntu resolute/universe amd64 libparpack2-dev amd64 3.9.1-6 [113 kB] 111s Get:291 http://ftpmaster.internal/ubuntu resolute/universe amd64 libslepc-real3.24-dev amd64 3.24.2+dfsg1-1 [8326 kB] 111s Get:292 http://ftpmaster.internal/ubuntu resolute/universe amd64 libdolfinx-real-dev amd64 1:0.10.0.post5-4 [5852 B] 111s Get:293 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpugixml-dev amd64 1.14-2build1 [118 kB] 111s Get:294 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfmt-dev amd64 10.1.1+ds1-4build1 [123 kB] 111s Get:295 http://ftpmaster.internal/ubuntu resolute/universe amd64 libspdlog-dev amd64 1:1.15.3+ds-1 [89.8 kB] 111s Get:296 http://ftpmaster.internal/ubuntu resolute/main amd64 liblzma-dev amd64 5.8.2-2 [179 kB] 111s Get:297 http://ftpmaster.internal/ubuntu resolute/main amd64 libxml2-dev amd64 2.15.1+dfsg-2ubuntu1 [709 kB] 111s Get:298 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-ply all 3.11-10 [45.9 kB] 111s Get:299 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-pycparser all 2.23-2 [77.0 kB] 111s Get:300 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-cffi all 2.0.0-2 [75.5 kB] 111s Get:301 http://ftpmaster.internal/ubuntu resolute/main amd64 libexpat1-dev amd64 2.7.3-1 [143 kB] 111s Get:302 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.13-dev amd64 3.13.11-1 [5798 kB] 111s Get:303 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3-dev amd64 3.13.9-3 [11.2 kB] 111s Get:304 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.13-dev amd64 3.13.11-1 [508 kB] 111s Get:305 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-dev amd64 3.13.9-3 [26.6 kB] 111s Get:306 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-ufl all 2025.2.0.post0-3 [155 kB] 111s Get:307 http://ftpmaster.internal/ubuntu resolute/universe amd64 robin-map-dev all 1.4.1-1 [30.1 kB] 111s Get:308 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 nanobind-dev all 2.10.2-2 [150 kB] 111s Get:309 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 python3-nanobind all 2.10.2-2 [17.3 kB] 111s Get:310 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 python3-basix amd64 0.10.0.post0-2build1 [149 kB] 111s Get:311 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-ffcx all 1:0.10.1-3 [92.2 kB] 111s Get:312 http://ftpmaster.internal/ubuntu resolute/universe amd64 libdolfinx-dev amd64 1:0.10.0.post5-4 [185 kB] 112s Fetched 317 MB in 8s (38.4 MB/s) 112s Selecting previously unselected package python3-numpy-dev:amd64. 112s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83956 files and directories currently installed.) 112s Preparing to unpack .../000-python3-numpy-dev_1%3a2.3.5+ds-3_amd64.deb ... 112s Unpacking python3-numpy-dev:amd64 (1:2.3.5+ds-3) ... 112s Selecting previously unselected package libblas3:amd64. 112s Preparing to unpack .../001-libblas3_3.12.1-7ubuntu1_amd64.deb ... 112s Unpacking libblas3:amd64 (3.12.1-7ubuntu1) ... 112s Selecting previously unselected package libgfortran5:amd64. 112s Preparing to unpack .../002-libgfortran5_15.2.0-12ubuntu1_amd64.deb ... 112s Unpacking libgfortran5:amd64 (15.2.0-12ubuntu1) ... 112s Selecting previously unselected package liblapack3:amd64. 112s Preparing to unpack .../003-liblapack3_3.12.1-7ubuntu1_amd64.deb ... 112s Unpacking liblapack3:amd64 (3.12.1-7ubuntu1) ... 112s Selecting previously unselected package python3-numpy. 112s Preparing to unpack .../004-python3-numpy_1%3a2.3.5+ds-3_amd64.deb ... 112s Unpacking python3-numpy (1:2.3.5+ds-3) ... 112s Selecting previously unselected package m4. 112s Preparing to unpack .../005-m4_1.4.20-2_amd64.deb ... 112s Unpacking m4 (1.4.20-2) ... 112s Selecting previously unselected package autoconf. 112s Preparing to unpack .../006-autoconf_2.72-3.1ubuntu1_all.deb ... 112s Unpacking autoconf (2.72-3.1ubuntu1) ... 112s Selecting previously unselected package autotools-dev. 112s Preparing to unpack .../007-autotools-dev_20240727.1_all.deb ... 112s Unpacking autotools-dev (20240727.1) ... 112s Selecting previously unselected package automake. 112s Preparing to unpack .../008-automake_1%3a1.18.1-3build1_all.deb ... 112s Unpacking automake (1:1.18.1-3build1) ... 113s Selecting previously unselected package autopoint. 113s Preparing to unpack .../009-autopoint_0.23.2-1_all.deb ... 113s Unpacking autopoint (0.23.2-1) ... 113s Selecting previously unselected package libc-dev-bin. 113s Preparing to unpack .../010-libc-dev-bin_2.42-2ubuntu4_amd64.deb ... 113s Unpacking libc-dev-bin (2.42-2ubuntu4) ... 113s Selecting previously unselected package linux-libc-dev:amd64. 113s Preparing to unpack .../011-linux-libc-dev_6.18.0-9.9_amd64.deb ... 113s Unpacking linux-libc-dev:amd64 (6.18.0-9.9) ... 113s Selecting previously unselected package libcrypt-dev:amd64. 113s Preparing to unpack .../012-libcrypt-dev_1%3a4.5.1-1_amd64.deb ... 113s Unpacking libcrypt-dev:amd64 (1:4.5.1-1) ... 113s Selecting previously unselected package rpcsvc-proto. 113s Preparing to unpack .../013-rpcsvc-proto_1.4.3-1_amd64.deb ... 113s Unpacking rpcsvc-proto (1.4.3-1) ... 113s Selecting previously unselected package libc6-dev:amd64. 113s Preparing to unpack .../014-libc6-dev_2.42-2ubuntu4_amd64.deb ... 113s Unpacking libc6-dev:amd64 (2.42-2ubuntu4) ... 113s Selecting previously unselected package libisl23:amd64. 113s Preparing to unpack .../015-libisl23_0.27-1build1_amd64.deb ... 113s Unpacking libisl23:amd64 (0.27-1build1) ... 113s Selecting previously unselected package libmpc3:amd64. 113s Preparing to unpack .../016-libmpc3_1.3.1-2_amd64.deb ... 113s Unpacking libmpc3:amd64 (1.3.1-2) ... 113s Selecting previously unselected package cpp-15-x86-64-linux-gnu. 113s Preparing to unpack .../017-cpp-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ... 113s Unpacking cpp-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 113s Selecting previously unselected package cpp-15. 113s Preparing to unpack .../018-cpp-15_15.2.0-12ubuntu1_amd64.deb ... 113s Unpacking cpp-15 (15.2.0-12ubuntu1) ... 113s Selecting previously unselected package cpp-x86-64-linux-gnu. 113s Preparing to unpack .../019-cpp-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 113s Unpacking cpp-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 113s Selecting previously unselected package cpp. 113s Preparing to unpack .../020-cpp_4%3a15.2.0-4ubuntu1_amd64.deb ... 113s Unpacking cpp (4:15.2.0-4ubuntu1) ... 113s Selecting previously unselected package libcc1-0:amd64. 113s Preparing to unpack .../021-libcc1-0_15.2.0-12ubuntu1_amd64.deb ... 113s Unpacking libcc1-0:amd64 (15.2.0-12ubuntu1) ... 113s Selecting previously unselected package libgomp1:amd64. 113s Preparing to unpack .../022-libgomp1_15.2.0-12ubuntu1_amd64.deb ... 113s Unpacking libgomp1:amd64 (15.2.0-12ubuntu1) ... 113s Selecting previously unselected package libitm1:amd64. 113s Preparing to unpack .../023-libitm1_15.2.0-12ubuntu1_amd64.deb ... 113s Unpacking libitm1:amd64 (15.2.0-12ubuntu1) ... 113s Selecting previously unselected package libasan8:amd64. 113s Preparing to unpack .../024-libasan8_15.2.0-12ubuntu1_amd64.deb ... 113s Unpacking libasan8:amd64 (15.2.0-12ubuntu1) ... 113s Selecting previously unselected package liblsan0:amd64. 113s Preparing to unpack .../025-liblsan0_15.2.0-12ubuntu1_amd64.deb ... 113s Unpacking liblsan0:amd64 (15.2.0-12ubuntu1) ... 113s Selecting previously unselected package libtsan2:amd64. 113s Preparing to unpack .../026-libtsan2_15.2.0-12ubuntu1_amd64.deb ... 113s Unpacking libtsan2:amd64 (15.2.0-12ubuntu1) ... 113s Selecting previously unselected package libubsan1:amd64. 113s Preparing to unpack .../027-libubsan1_15.2.0-12ubuntu1_amd64.deb ... 113s Unpacking libubsan1:amd64 (15.2.0-12ubuntu1) ... 113s Selecting previously unselected package libhwasan0:amd64. 113s Preparing to unpack .../028-libhwasan0_15.2.0-12ubuntu1_amd64.deb ... 113s Unpacking libhwasan0:amd64 (15.2.0-12ubuntu1) ... 113s Selecting previously unselected package libquadmath0:amd64. 114s Preparing to unpack .../029-libquadmath0_15.2.0-12ubuntu1_amd64.deb ... 114s Unpacking libquadmath0:amd64 (15.2.0-12ubuntu1) ... 114s Selecting previously unselected package libgcc-15-dev:amd64. 114s Preparing to unpack .../030-libgcc-15-dev_15.2.0-12ubuntu1_amd64.deb ... 114s Unpacking libgcc-15-dev:amd64 (15.2.0-12ubuntu1) ... 114s Selecting previously unselected package gcc-15-x86-64-linux-gnu. 114s Preparing to unpack .../031-gcc-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ... 114s Unpacking gcc-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 114s Selecting previously unselected package gcc-15. 114s Preparing to unpack .../032-gcc-15_15.2.0-12ubuntu1_amd64.deb ... 114s Unpacking gcc-15 (15.2.0-12ubuntu1) ... 114s Selecting previously unselected package gcc-x86-64-linux-gnu. 114s Preparing to unpack .../033-gcc-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 114s Unpacking gcc-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 114s Selecting previously unselected package gcc. 114s Preparing to unpack .../034-gcc_4%3a15.2.0-4ubuntu1_amd64.deb ... 114s Unpacking gcc (4:15.2.0-4ubuntu1) ... 114s Selecting previously unselected package libstdc++-15-dev:amd64. 114s Preparing to unpack .../035-libstdc++-15-dev_15.2.0-12ubuntu1_amd64.deb ... 114s Unpacking libstdc++-15-dev:amd64 (15.2.0-12ubuntu1) ... 114s Selecting previously unselected package g++-15-x86-64-linux-gnu. 114s Preparing to unpack .../036-g++-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ... 114s Unpacking g++-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 114s Selecting previously unselected package g++-15. 114s Preparing to unpack .../037-g++-15_15.2.0-12ubuntu1_amd64.deb ... 114s Unpacking g++-15 (15.2.0-12ubuntu1) ... 114s Selecting previously unselected package g++-x86-64-linux-gnu. 114s Preparing to unpack .../038-g++-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 114s Unpacking g++-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 115s Selecting previously unselected package g++. 115s Preparing to unpack .../039-g++_4%3a15.2.0-4ubuntu1_amd64.deb ... 115s Unpacking g++ (4:15.2.0-4ubuntu1) ... 115s Selecting previously unselected package build-essential. 115s Preparing to unpack .../040-build-essential_12.12ubuntu2_amd64.deb ... 115s Unpacking build-essential (12.12ubuntu2) ... 115s Selecting previously unselected package cmake-data. 115s Preparing to unpack .../041-cmake-data_4.1.1+really3.31.6-2ubuntu1_all.deb ... 115s Unpacking cmake-data (4.1.1+really3.31.6-2ubuntu1) ... 115s Selecting previously unselected package libjsoncpp26:amd64. 115s Preparing to unpack .../042-libjsoncpp26_1.9.6-5_amd64.deb ... 115s Unpacking libjsoncpp26:amd64 (1.9.6-5) ... 115s Selecting previously unselected package librhash1:amd64. 115s Preparing to unpack .../043-librhash1_1.4.6-1.1_amd64.deb ... 115s Unpacking librhash1:amd64 (1.4.6-1.1) ... 115s Selecting previously unselected package cmake. 115s Preparing to unpack .../044-cmake_4.1.1+really3.31.6-2ubuntu1_amd64.deb ... 115s Unpacking cmake (4.1.1+really3.31.6-2ubuntu1) ... 115s Selecting previously unselected package libdebhelper-perl. 115s Preparing to unpack .../045-libdebhelper-perl_13.28ubuntu1_all.deb ... 115s Unpacking libdebhelper-perl (13.28ubuntu1) ... 115s Selecting previously unselected package libtool. 115s Preparing to unpack .../046-libtool_2.5.4-9_all.deb ... 115s Unpacking libtool (2.5.4-9) ... 115s Selecting previously unselected package dh-autoreconf. 115s Preparing to unpack .../047-dh-autoreconf_21_all.deb ... 115s Unpacking dh-autoreconf (21) ... 115s Selecting previously unselected package libarchive-zip-perl. 115s Preparing to unpack .../048-libarchive-zip-perl_1.68-1_all.deb ... 115s Unpacking libarchive-zip-perl (1.68-1) ... 115s Selecting previously unselected package libfile-stripnondeterminism-perl. 115s Preparing to unpack .../049-libfile-stripnondeterminism-perl_1.15.0-1build1_all.deb ... 115s Unpacking libfile-stripnondeterminism-perl (1.15.0-1build1) ... 115s Selecting previously unselected package dh-strip-nondeterminism. 115s Preparing to unpack .../050-dh-strip-nondeterminism_1.15.0-1build1_all.deb ... 115s Unpacking dh-strip-nondeterminism (1.15.0-1build1) ... 115s Selecting previously unselected package debugedit. 115s Preparing to unpack .../051-debugedit_1%3a5.2-3_amd64.deb ... 115s Unpacking debugedit (1:5.2-3) ... 115s Selecting previously unselected package dwz. 115s Preparing to unpack .../052-dwz_0.16-2_amd64.deb ... 115s Unpacking dwz (0.16-2) ... 115s Selecting previously unselected package gettext. 115s Preparing to unpack .../053-gettext_0.23.2-1_amd64.deb ... 115s Unpacking gettext (0.23.2-1) ... 115s Selecting previously unselected package intltool-debian. 115s Preparing to unpack .../054-intltool-debian_0.35.0+20060710.6build1_all.deb ... 115s Unpacking intltool-debian (0.35.0+20060710.6build1) ... 115s Selecting previously unselected package po-debconf. 115s Preparing to unpack .../055-po-debconf_1.0.22_all.deb ... 115s Unpacking po-debconf 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Unpacking ocl-icd-libopencl1:amd64 (2.3.4-1) ... 116s Selecting previously unselected package libhwloc-plugins:amd64. 116s Preparing to unpack .../076-libhwloc-plugins_2.12.2-1_amd64.deb ... 116s Unpacking libhwloc-plugins:amd64 (2.12.2-1) ... 116s Selecting previously unselected package libopenmpi40:amd64. 116s Preparing to unpack .../077-libopenmpi40_5.0.8-8ubuntu1_amd64.deb ... 116s Unpacking libopenmpi40:amd64 (5.0.8-8ubuntu1) ... 116s Selecting previously unselected package libsz2:amd64. 116s Preparing to unpack .../078-libsz2_1.1.5-1_amd64.deb ... 116s Unpacking libsz2:amd64 (1.1.5-1) ... 116s Selecting previously unselected package libhdf5-openmpi-310:amd64. 116s Preparing to unpack .../079-libhdf5-openmpi-310_1.14.6+repack-2_amd64.deb ... 116s Unpacking libhdf5-openmpi-310:amd64 (1.14.6+repack-2) ... 116s Selecting previously unselected package libadios2-mpi-auxiliary-2.10:amd64. 116s Preparing to unpack .../080-libadios2-mpi-auxiliary-2.10_2.10.2+dfsg1-5build2_amd64.deb ... 116s Unpacking libadios2-mpi-auxiliary-2.10:amd64 (2.10.2+dfsg1-5build2) ... 117s Selecting previously unselected package libblosc2-6:amd64. 117s Preparing to unpack .../081-libblosc2-6_2.22.0+ds-1_amd64.deb ... 117s Unpacking libblosc2-6:amd64 (2.22.0+ds-1) ... 117s Selecting previously unselected package libpugixml1v5:amd64. 117s Preparing to unpack .../082-libpugixml1v5_1.14-2build1_amd64.deb ... 117s Unpacking libpugixml1v5:amd64 (1.14-2build1) ... 117s Selecting previously unselected package libyaml-cpp0.8:amd64. 117s Preparing to unpack .../083-libyaml-cpp0.8_0.8.0+dfsg-9_amd64.deb ... 117s Unpacking libyaml-cpp0.8:amd64 (0.8.0+dfsg-9) ... 117s Selecting previously unselected package libzfp1t64:amd64. 117s Preparing to unpack .../084-libzfp1t64_1.0.1-4build4_amd64.deb ... 117s Unpacking libzfp1t64:amd64 (1.0.1-4build4) ... 117s Selecting previously unselected package libnorm1t64:amd64. 117s Preparing to unpack .../085-libnorm1t64_1.5.9+dfsg-4_amd64.deb ... 117s Unpacking libnorm1t64:amd64 (1.5.9+dfsg-4) ... 117s Selecting previously unselected package libpgm-5.3-0t64:amd64. 117s Preparing to unpack .../086-libpgm-5.3-0t64_5.3.128~dfsg-2.1build2_amd64.deb ... 117s Unpacking libpgm-5.3-0t64:amd64 (5.3.128~dfsg-2.1build2) ... 117s Selecting previously unselected package libsodium23:amd64. 117s Preparing to unpack .../087-libsodium23_1.0.18-2_amd64.deb ... 117s Unpacking libsodium23:amd64 (1.0.18-2) ... 117s Selecting previously unselected package libzmq5:amd64. 117s Preparing to unpack .../088-libzmq5_4.3.5-1build3_amd64.deb ... 117s Unpacking libzmq5:amd64 (4.3.5-1build3) ... 117s Selecting previously unselected package libadios2-mpi-plugins:amd64. 117s Preparing to unpack .../089-libadios2-mpi-plugins_2.10.2+dfsg1-5build2_amd64.deb ... 117s Unpacking libadios2-mpi-plugins:amd64 (2.10.2+dfsg1-5build2) ... 117s Selecting previously unselected package libadios2-mpi-core-2.10:amd64. 117s Preparing to unpack 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previously unselected package libcamd3:amd64. 117s Preparing to unpack .../095-libcamd3_1%3a7.12.1+dfsg-1_amd64.deb ... 117s Unpacking libcamd3:amd64 (1:7.12.1+dfsg-1) ... 117s Selecting previously unselected package libccolamd3:amd64. 117s Preparing to unpack .../096-libccolamd3_1%3a7.12.1+dfsg-1_amd64.deb ... 117s Unpacking libccolamd3:amd64 (1:7.12.1+dfsg-1) ... 117s Selecting previously unselected package libcolamd3:amd64. 117s Preparing to unpack .../097-libcolamd3_1%3a7.12.1+dfsg-1_amd64.deb ... 117s Unpacking libcolamd3:amd64 (1:7.12.1+dfsg-1) ... 117s Selecting previously unselected package libcholmod5:amd64. 117s Preparing to unpack .../098-libcholmod5_1%3a7.12.1+dfsg-1_amd64.deb ... 117s Unpacking libcholmod5:amd64 (1:7.12.1+dfsg-1) ... 117s Selecting previously unselected package libfftw3-double3:amd64. 117s Preparing to unpack .../099-libfftw3-double3_3.3.10-2fakesync1build2_amd64.deb ... 117s Unpacking libfftw3-double3:amd64 (3.3.10-2fakesync1build2) ... 117s Selecting previously unselected package libfftw3-long3:amd64. 117s Preparing to unpack .../100-libfftw3-long3_3.3.10-2fakesync1build2_amd64.deb ... 117s Unpacking libfftw3-long3:amd64 (3.3.10-2fakesync1build2) ... 117s Selecting previously unselected package libfftw3-single3:amd64. 117s Preparing to unpack .../101-libfftw3-single3_3.3.10-2fakesync1build2_amd64.deb ... 117s Unpacking libfftw3-single3:amd64 (3.3.10-2fakesync1build2) ... 117s Selecting previously unselected package libfftw3-mpi3:amd64. 117s Preparing to unpack .../102-libfftw3-mpi3_3.3.10-2fakesync1build2_amd64.deb ... 117s Unpacking libfftw3-mpi3:amd64 (3.3.10-2fakesync1build2) ... 117s Selecting previously unselected package libcombblas2.0.0t64:amd64. 117s Preparing to unpack .../103-libcombblas2.0.0t64_2.0.0-7_amd64.deb ... 117s Unpacking libcombblas2.0.0t64:amd64 (2.0.0-7) ... 117s Selecting previously unselected package libmetis5:amd64. 117s Preparing to unpack .../104-libmetis5_5.1.0.dfsg-8_amd64.deb ... 117s Unpacking libmetis5:amd64 (5.1.0.dfsg-8) ... 117s Selecting previously unselected package libptscotcherr-7.0:amd64. 117s Preparing to unpack .../105-libptscotcherr-7.0_7.0.10-7ubuntu4_amd64.deb ... 117s Unpacking libptscotcherr-7.0:amd64 (7.0.10-7ubuntu4) ... 117s Selecting previously unselected package libscotcherr-7.0:amd64. 117s Preparing to unpack .../106-libscotcherr-7.0_7.0.10-7ubuntu4_amd64.deb ... 117s Unpacking libscotcherr-7.0:amd64 (7.0.10-7ubuntu4) ... 117s Selecting previously unselected package libscotch-7.0c:amd64. 117s Preparing to unpack .../107-libscotch-7.0c_7.0.10-7ubuntu4_amd64.deb ... 117s Unpacking libscotch-7.0c:amd64 (7.0.10-7ubuntu4) ... 117s Selecting previously unselected package libptscotch-7.0c:amd64. 117s Preparing to unpack .../108-libptscotch-7.0c_7.0.10-7ubuntu4_amd64.deb ... 117s Unpacking libptscotch-7.0c:amd64 (7.0.10-7ubuntu4) ... 117s Selecting previously unselected package libsuperlu-dist9:amd64. 117s Preparing to unpack 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openmpi-bin (5.0.8-8ubuntu1) ... 117s Selecting previously unselected package mpi-default-bin. 117s Preparing to unpack .../115-mpi-default-bin_1.20_amd64.deb ... 117s Unpacking mpi-default-bin (1.20) ... 117s Selecting previously unselected package libscalapack-openmpi2.2:amd64. 117s Preparing to unpack .../116-libscalapack-openmpi2.2_2.2.2-5_amd64.deb ... 117s Unpacking libscalapack-openmpi2.2:amd64 (2.2.2-5) ... 117s Selecting previously unselected package libmumps-5.8:amd64. 117s Preparing to unpack .../117-libmumps-5.8_5.8.1-2ubuntu1_amd64.deb ... 117s Unpacking libmumps-5.8:amd64 (5.8.1-2ubuntu1) ... 118s Selecting previously unselected package libspqr4:amd64. 118s Preparing to unpack .../118-libspqr4_1%3a7.12.1+dfsg-1_amd64.deb ... 118s Unpacking libspqr4:amd64 (1:7.12.1+dfsg-1) ... 118s Selecting previously unselected package libsuperlu7:amd64. 118s Preparing to unpack .../119-libsuperlu7_7.0.1+dfsg1-2_amd64.deb ... 118s Unpacking libsuperlu7:amd64 (7.0.1+dfsg1-2) ... 118s Selecting previously unselected package libumfpack6:amd64. 118s Preparing to unpack .../120-libumfpack6_1%3a7.12.1+dfsg-1_amd64.deb ... 118s Unpacking libumfpack6:amd64 (1:7.12.1+dfsg-1) ... 118s Selecting previously unselected package libpetsc-real3.24:amd64. 118s Preparing to unpack .../121-libpetsc-real3.24_3.24.3+dfsg1-1ubuntu1_amd64.deb ... 118s Unpacking libpetsc-real3.24:amd64 (3.24.3+dfsg1-1ubuntu1) ... 118s Selecting previously unselected package libarpack2t64:amd64. 118s Preparing to unpack .../122-libarpack2t64_3.9.1-6_amd64.deb ... 118s Unpacking libarpack2t64:amd64 (3.9.1-6) ... 118s Selecting previously unselected package libparpack2t64:amd64. 118s Preparing to unpack .../123-libparpack2t64_3.9.1-6_amd64.deb ... 118s Unpacking libparpack2t64:amd64 (3.9.1-6) ... 118s Selecting previously unselected package libslepc-real3.24. 118s Preparing to unpack .../124-libslepc-real3.24_3.24.2+dfsg1-1_amd64.deb ... 118s Unpacking libslepc-real3.24 (3.24.2+dfsg1-1) ... 118s Selecting previously unselected package libspdlog1.15:amd64. 118s Preparing to unpack .../125-libspdlog1.15_1%3a1.15.3+ds-1_amd64.deb ... 118s Unpacking libspdlog1.15:amd64 (1:1.15.3+ds-1) ... 118s Selecting previously unselected package libdolfinx-real0.10:amd64. 118s Preparing to unpack .../126-libdolfinx-real0.10_1%3a0.10.0.post5-4_amd64.deb ... 118s Unpacking libdolfinx-real0.10:amd64 (1:0.10.0.post5-4) ... 118s Selecting previously unselected package fenicsx-performance-tests. 118s Preparing to unpack .../127-fenicsx-performance-tests_0.10.0-2_amd64.deb ... 118s Unpacking fenicsx-performance-tests (0.10.0-2) ... 118s Selecting previously unselected package fenicsx-performance-tests-source. 118s Preparing to unpack .../128-fenicsx-performance-tests-source_0.10.0-2_all.deb ... 118s Unpacking fenicsx-performance-tests-source (0.10.0-2) ... 118s Selecting previously unselected package fonts-mathjax. 118s Preparing to unpack .../129-fonts-mathjax_2.7.9+dfsg-1build1_all.deb ... 118s Unpacking fonts-mathjax (2.7.9+dfsg-1build1) ... 118s Selecting previously unselected package libgfortran-15-dev:amd64. 118s Preparing to unpack .../130-libgfortran-15-dev_15.2.0-12ubuntu1_amd64.deb ... 118s Unpacking libgfortran-15-dev:amd64 (15.2.0-12ubuntu1) ... 118s Selecting previously unselected package gfortran-15-x86-64-linux-gnu. 118s Preparing to unpack .../131-gfortran-15-x86-64-linux-gnu_15.2.0-12ubuntu1_amd64.deb ... 118s Unpacking gfortran-15-x86-64-linux-gnu (15.2.0-12ubuntu1) ... 118s Selecting previously unselected package gfortran-15. 118s Preparing to unpack .../132-gfortran-15_15.2.0-12ubuntu1_amd64.deb ... 118s Unpacking gfortran-15 (15.2.0-12ubuntu1) ... 118s Selecting previously unselected package gfortran-x86-64-linux-gnu. 118s Preparing to unpack .../133-gfortran-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 118s Unpacking gfortran-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 118s Selecting previously unselected package gfortran. 118s Preparing to unpack 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previously unselected package libicu-dev:amd64. 121s Preparing to unpack .../176-libicu-dev_78.2-1ubuntu1_amd64.deb ... 121s Unpacking libicu-dev:amd64 (78.2-1ubuntu1) ... 121s Selecting previously unselected package libboost-regex1.88-dev:amd64. 121s Preparing to unpack .../177-libboost-regex1.88-dev_1.88.0-1.4ubuntu3_amd64.deb ... 121s Unpacking libboost-regex1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 121s Selecting previously unselected package libboost-test1.88.0:amd64. 121s Preparing to unpack .../178-libboost-test1.88.0_1.88.0-1.4ubuntu3_amd64.deb ... 121s Unpacking libboost-test1.88.0:amd64 (1.88.0-1.4ubuntu3) ... 121s Selecting previously unselected package libboost-test1.88-dev:amd64. 121s Preparing to unpack .../179-libboost-test1.88-dev_1.88.0-1.4ubuntu3_amd64.deb ... 121s Unpacking libboost-test1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 121s Selecting previously unselected package libboost-graph1.88-dev:amd64. 121s Preparing to unpack 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unpack .../222-libpsl-dev_0.21.2-1.1build2_amd64.deb ... 123s Unpacking libpsl-dev:amd64 (0.21.2-1.1build2) ... 123s Selecting previously unselected package libgmpxx4ldbl:amd64. 123s Preparing to unpack .../223-libgmpxx4ldbl_2%3a6.3.0+dfsg-5ubuntu1_amd64.deb ... 123s Unpacking libgmpxx4ldbl:amd64 (2:6.3.0+dfsg-5ubuntu1) ... 123s Selecting previously unselected package libgmp-dev:amd64. 123s Preparing to unpack .../224-libgmp-dev_2%3a6.3.0+dfsg-5ubuntu1_amd64.deb ... 123s Unpacking libgmp-dev:amd64 (2:6.3.0+dfsg-5ubuntu1) ... 123s Selecting previously unselected package libunbound8:amd64. 123s Preparing to unpack .../225-libunbound8_1.24.2-1ubuntu1_amd64.deb ... 123s Unpacking libunbound8:amd64 (1.24.2-1ubuntu1) ... 123s Selecting previously unselected package libgnutls-dane0t64:amd64. 123s Preparing to unpack .../226-libgnutls-dane0t64_3.8.10-3ubuntu1_amd64.deb ... 123s Unpacking libgnutls-dane0t64:amd64 (3.8.10-3ubuntu1) ... 123s Selecting previously unselected package libgnutls-openssl27t64:amd64. 123s Preparing to unpack .../227-libgnutls-openssl27t64_3.8.10-3ubuntu1_amd64.deb ... 123s Unpacking libgnutls-openssl27t64:amd64 (3.8.10-3ubuntu1) ... 123s Selecting previously unselected package libp11-kit-dev:amd64. 123s Preparing to unpack .../228-libp11-kit-dev_0.25.10-1_amd64.deb ... 123s Unpacking libp11-kit-dev:amd64 (0.25.10-1) ... 123s Selecting previously unselected package libtasn1-6-dev:amd64. 123s Preparing to unpack .../229-libtasn1-6-dev_4.21.0-2_amd64.deb ... 123s Unpacking libtasn1-6-dev:amd64 (4.21.0-2) ... 123s Selecting previously unselected package nettle-dev:amd64. 123s Preparing to unpack .../230-nettle-dev_3.10.2-1_amd64.deb ... 123s Unpacking nettle-dev:amd64 (3.10.2-1) ... 123s Selecting previously unselected package libgnutls28-dev:amd64. 123s Preparing to unpack .../231-libgnutls28-dev_3.8.10-3ubuntu1_amd64.deb ... 123s Unpacking libgnutls28-dev:amd64 (3.8.10-3ubuntu1) ... 123s Selecting previously unselected package librtmp-dev:amd64. 123s Preparing to unpack .../232-librtmp-dev_2.4+20151223.gitfa8646d.1-3_amd64.deb ... 123s Unpacking librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-3) ... 123s Selecting previously unselected package libssl-dev:amd64. 123s Preparing to unpack .../233-libssl-dev_3.5.3-1ubuntu2_amd64.deb ... 123s Unpacking libssl-dev:amd64 (3.5.3-1ubuntu2) ... 123s Selecting previously unselected package libssh2-1-dev:amd64. 123s Preparing to unpack .../234-libssh2-1-dev_1.11.1-1build1_amd64.deb ... 123s Unpacking libssh2-1-dev:amd64 (1.11.1-1build1) ... 123s Selecting previously unselected package libzstd-dev:amd64. 123s Preparing to unpack .../235-libzstd-dev_1.5.7+dfsg-2_amd64.deb ... 123s Unpacking libzstd-dev:amd64 (1.5.7+dfsg-2) ... 123s Selecting previously unselected package libcurl4-openssl-dev:amd64. 123s Preparing to unpack .../236-libcurl4-openssl-dev_8.18.0-1ubuntu1_amd64.deb ... 123s Unpacking libcurl4-openssl-dev:amd64 (8.18.0-1ubuntu1) ... 123s Selecting previously unselected package libcxsparse4:amd64. 123s Preparing to unpack .../237-libcxsparse4_1%3a7.12.1+dfsg-1_amd64.deb ... 123s Unpacking libcxsparse4:amd64 (1:7.12.1+dfsg-1) ... 123s Selecting previously unselected package libjs-mathjax. 123s Preparing to unpack .../238-libjs-mathjax_2.7.9+dfsg-1build1_all.deb ... 123s Unpacking libjs-mathjax (2.7.9+dfsg-1build1) ... 124s Selecting previously unselected package libldl3:amd64. 124s Preparing to unpack .../239-libldl3_1%3a7.12.1+dfsg-1_amd64.deb ... 124s Unpacking libldl3:amd64 (1:7.12.1+dfsg-1) ... 124s Selecting previously unselected package libsuitesparse-mongoose3:amd64. 124s Preparing to unpack .../240-libsuitesparse-mongoose3_1%3a7.12.1+dfsg-1_amd64.deb ... 124s Unpacking libsuitesparse-mongoose3:amd64 (1:7.12.1+dfsg-1) ... 124s Selecting previously unselected package librbio4:amd64. 124s Preparing to unpack .../241-librbio4_1%3a7.12.1+dfsg-1_amd64.deb ... 124s Unpacking librbio4:amd64 (1:7.12.1+dfsg-1) ... 124s Selecting previously unselected package libspex3:amd64. 124s Preparing to unpack .../242-libspex3_1%3a7.12.1+dfsg-1_amd64.deb ... 124s Unpacking libspex3:amd64 (1:7.12.1+dfsg-1) ... 124s Selecting previously unselected package libparu1:amd64. 124s Preparing to unpack .../243-libparu1_1%3a7.12.1+dfsg-1_amd64.deb ... 124s Unpacking libparu1:amd64 (1:7.12.1+dfsg-1) ... 124s Selecting previously unselected package libsuitesparse-dev:amd64. 124s Preparing to unpack .../244-libsuitesparse-dev_1%3a7.12.1+dfsg-1_amd64.deb ... 124s Unpacking libsuitesparse-dev:amd64 (1:7.12.1+dfsg-1) ... 124s Selecting previously unselected package libptscotcherr-dev:amd64. 124s Preparing to unpack .../245-libptscotcherr-dev_7.0.10-7ubuntu4_amd64.deb ... 124s Unpacking libptscotcherr-dev:amd64 (7.0.10-7ubuntu4) ... 124s Selecting previously unselected package libscotcherr-dev:amd64. 124s Preparing to unpack .../246-libscotcherr-dev_7.0.10-7ubuntu4_amd64.deb ... 124s Unpacking libscotcherr-dev:amd64 (7.0.10-7ubuntu4) ... 124s Selecting previously unselected package libscotch-dev:amd64. 124s Preparing to unpack .../247-libscotch-dev_7.0.10-7ubuntu4_amd64.deb ... 124s Unpacking libscotch-dev:amd64 (7.0.10-7ubuntu4) ... 124s Selecting previously unselected package libptscotch-dev:amd64. 124s Preparing to unpack .../248-libptscotch-dev_7.0.10-7ubuntu4_amd64.deb ... 124s Unpacking libptscotch-dev:amd64 (7.0.10-7ubuntu4) ... 124s Selecting previously unselected package libscalapack-openmpi-dev:amd64. 124s Preparing to unpack .../249-libscalapack-openmpi-dev_2.2.2-5_amd64.deb ... 124s Unpacking libscalapack-openmpi-dev:amd64 (2.2.2-5) ... 124s Selecting previously unselected package libscalapack-mpi-dev:amd64. 124s Preparing to unpack .../250-libscalapack-mpi-dev_2.2.2-5_amd64.deb ... 124s Unpacking libscalapack-mpi-dev:amd64 (2.2.2-5) ... 124s Selecting previously unselected package libfftw3-quad3:amd64. 124s Preparing to unpack .../251-libfftw3-quad3_3.3.10-2fakesync1build2_amd64.deb ... 124s Unpacking libfftw3-quad3:amd64 (3.3.10-2fakesync1build2) ... 124s Selecting previously unselected package libfftw3-bin. 124s Preparing to unpack .../252-libfftw3-bin_3.3.10-2fakesync1build2_amd64.deb ... 124s Unpacking libfftw3-bin (3.3.10-2fakesync1build2) ... 124s Selecting previously unselected package libfftw3-dev:amd64. 124s Preparing to unpack .../253-libfftw3-dev_3.3.10-2fakesync1build2_amd64.deb ... 124s Unpacking libfftw3-dev:amd64 (3.3.10-2fakesync1build2) ... 124s Selecting previously unselected package libfftw3-mpi-dev:amd64. 124s Preparing to unpack .../254-libfftw3-mpi-dev_3.3.10-2fakesync1build2_amd64.deb ... 124s Unpacking libfftw3-mpi-dev:amd64 (3.3.10-2fakesync1build2) ... 124s Selecting previously unselected package opencl-c-headers. 124s Preparing to unpack .../255-opencl-c-headers_3.0~2025.07.22-2build1_all.deb ... 124s Unpacking opencl-c-headers (3.0~2025.07.22-2build1) ... 124s Selecting previously unselected package opencl-clhpp-headers. 124s Preparing to unpack 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libhdf5-openmpi-hl-fortran-310:amd64 (1.14.6+repack-2) ... 124s Selecting previously unselected package libhdf5-openmpi-cpp-310:amd64. 124s Preparing to unpack .../261-libhdf5-openmpi-cpp-310_1.14.6+repack-2_amd64.deb ... 124s Unpacking libhdf5-openmpi-cpp-310:amd64 (1.14.6+repack-2) ... 124s Selecting previously unselected package libhdf5-openmpi-hl-cpp-310:amd64. 124s Preparing to unpack .../262-libhdf5-openmpi-hl-cpp-310_1.14.6+repack-2_amd64.deb ... 124s Unpacking libhdf5-openmpi-hl-cpp-310:amd64 (1.14.6+repack-2) ... 124s Selecting previously unselected package libaec-dev:amd64. 125s Preparing to unpack .../263-libaec-dev_1.1.5-1_amd64.deb ... 125s Unpacking libaec-dev:amd64 (1.1.5-1) ... 125s Selecting previously unselected package libjpeg-turbo8:amd64. 125s Preparing to unpack .../264-libjpeg-turbo8_2.1.5-4ubuntu2_amd64.deb ... 125s Unpacking libjpeg-turbo8:amd64 (2.1.5-4ubuntu2) ... 125s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 125s Preparing to unpack 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libyaml-dev:amd64 (0.2.5-2build2) ... 125s Selecting previously unselected package libpetsc3.24-dev-common. 125s Preparing to unpack .../281-libpetsc3.24-dev-common_3.24.3+dfsg1-1ubuntu1_all.deb ... 125s Unpacking libpetsc3.24-dev-common (3.24.3+dfsg1-1ubuntu1) ... 125s Selecting previously unselected package libhypre-dev:amd64. 125s Preparing to unpack .../282-libhypre-dev_3.0.0-5_amd64.deb ... 125s Unpacking libhypre-dev:amd64 (3.0.0-5) ... 125s Selecting previously unselected package libmumps-headers-dev. 125s Preparing to unpack .../283-libmumps-headers-dev_5.8.1-2ubuntu1_all.deb ... 125s Unpacking libmumps-headers-dev (5.8.1-2ubuntu1) ... 125s Selecting previously unselected package libmumps-dev:amd64. 125s Preparing to unpack .../284-libmumps-dev_5.8.1-2ubuntu1_amd64.deb ... 125s Unpacking libmumps-dev:amd64 (5.8.1-2ubuntu1) ... 125s Selecting previously unselected package libc6-dbg:amd64. 125s Preparing to unpack .../285-libc6-dbg_2.42-2ubuntu4_amd64.deb ... 125s Unpacking libc6-dbg:amd64 (2.42-2ubuntu4) ... 125s Selecting previously unselected package valgrind. 125s Preparing to unpack .../286-valgrind_1%3a3.25.1-3ubuntu1_amd64.deb ... 125s Unpacking valgrind (1:3.25.1-3ubuntu1) ... 126s Selecting previously unselected package valgrind-mpi. 126s Preparing to unpack .../287-valgrind-mpi_1%3a3.25.1-3ubuntu1_amd64.deb ... 126s Unpacking valgrind-mpi (1:3.25.1-3ubuntu1) ... 126s Selecting previously unselected package libpetsc-real3.24-dev:amd64. 126s Preparing to unpack .../288-libpetsc-real3.24-dev_3.24.3+dfsg1-1ubuntu1_amd64.deb ... 126s Unpacking libpetsc-real3.24-dev:amd64 (3.24.3+dfsg1-1ubuntu1) ... 126s Selecting previously unselected package libparpack2-dev:amd64. 126s Preparing to unpack .../289-libparpack2-dev_3.9.1-6_amd64.deb ... 126s Unpacking libparpack2-dev:amd64 (3.9.1-6) ... 126s Selecting previously unselected package libslepc-real3.24-dev. 126s Preparing to unpack .../290-libslepc-real3.24-dev_3.24.2+dfsg1-1_amd64.deb ... 126s Unpacking 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libptscotch-7.0c:amd64 (7.0.10-7ubuntu4) ... 130s Setting up libboost-serialization-dev:amd64 (1.88.0.0ubuntu3) ... 130s Setting up g++ (4:15.2.0-4ubuntu1) ... 130s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 130s Setting up libparpack2t64:amd64 (3.9.1-6) ... 130s Setting up build-essential (12.12ubuntu2) ... 130s Setting up libboost-thread1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 130s Setting up libboost-filesystem-dev:amd64 (1.88.0.0ubuntu3) ... 130s Setting up openmpi-bin (5.0.8-8ubuntu1) ... 130s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 130s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 130s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 130s Setting up libboost-thread-dev:amd64 (1.88.0.0ubuntu3) ... 130s Setting up libboost-random1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 130s Setting up libhdf5-openmpi-hl-310:amd64 (1.14.6+repack-2) ... 130s Setting up libhdf5-openmpi-hl-fortran-310:amd64 (1.14.6+repack-2) ... 130s Setting up libboost-graph1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 130s Setting up libsuperlu-dist9:amd64 (9.2.1+dfsg1-1) ... 130s Setting up libhdf5-openmpi-hl-cpp-310:amd64 (1.14.6+repack-2) ... 130s Setting up libhdf5-openmpi-cpp-310:amd64 (1.14.6+repack-2) ... 130s Setting up libfftw3-mpi-dev:amd64 (3.3.10-2fakesync1build2) ... 130s Setting up mpi-default-bin (1.20) ... 130s Setting up libboost-iostreams1.88-dev:amd64 (1.88.0-1.4ubuntu3) ... 130s Setting up libhypre-3.0.0:amd64 (3.0.0-5) ... 130s Setting up libboost-iostreams-dev:amd64 (1.88.0.0ubuntu3) ... 130s Setting up libsuperlu-dist-dev:amd64 (9.2.1+dfsg1-1) ... 130s Setting up python3-ffcx (1:0.10.1-3) ... 130s Setting up libopenmpi-dev:amd64 (5.0.8-8ubuntu1) ... 130s update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode 130s Setting up libhdf5-openmpi-dev (1.14.6+repack-2) ... 130s update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode 130s update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 130s update-alternatives: updating alternative /usr/bin/mpicc.openmpi because link group mpi has changed slave links 130s update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-mpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 130s Setting up libscalapack-openmpi2.2:amd64 (2.2.2-5) ... 130s Setting up libmumps-5.8:amd64 (5.8.1-2ubuntu1) ... 130s Setting up libpetsc-real3.24:amd64 (3.24.3+dfsg1-1ubuntu1) ... 130s update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.3 to provide /usr/lib/x86_64-linux-gnu/libpetsc.so.3.24 (libpetsc.so.3.24) in auto mode 130s Setting up libslepc-real3.24 (3.24.2+dfsg1-1) ... 130s update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.24.2 to provide /usr/lib/x86_64-linux-gnu/libslepc.so.3.24 (libslepc.so.3.24) in auto mode 130s Setting up libscalapack-openmpi-dev:amd64 (2.2.2-5) ... 130s Setting up mpi-default-dev (1.20) ... 130s Setting up libscalapack-mpi-dev:amd64 (2.2.2-5) ... 130s Setting up libmumps-dev:amd64 (5.8.1-2ubuntu1) ... 130s Setting up libscotch-dev:amd64 (7.0.10-7ubuntu4) ... 130s Setting up libboost-mpi1.88-dev (1.88.0-1.4ubuntu3) ... 130s Setting up libparpack2-dev:amd64 (3.9.1-6) ... 130s Setting up libhypre-dev:amd64 (3.0.0-5) ... 130s Setting up libptscotch-dev:amd64 (7.0.10-7ubuntu4) ... 130s Setting up libboost-mpi-dev (1.88.0.0ubuntu3) ... 130s Setting up libhdf5-mpi-dev:amd64 (1.14.6+repack-2) ... 130s Setting up libpetsc3.24-dev-common (3.24.3+dfsg1-1ubuntu1) ... 131s /usr/share/petsc/3.24/lib/petsc/bin/petsc_tas_analysis.py:779: SyntaxWarning: invalid escape sequence '\l' 131s axMeshConv.set(xlabel='Problem Size $\log N$', ylabel='Error $\log |x - x^*|$', title='Mesh Convergence') 131s /usr/share/petsc/3.24/lib/petsc/bin/petsc_tas_analysis.py:779: SyntaxWarning: invalid escape sequence '\l' 131s axMeshConv.set(xlabel='Problem Size $\log N$', ylabel='Error $\log |x - x^*|$', title='Mesh Convergence') 131s /usr/share/petsc/3.24/lib/petsc/bin/petsclogformat.py:252: SyntaxWarning: invalid escape sequence '\d' 131s print("\documentclass{article}") 131s /usr/share/petsc/3.24/lib/petsc/bin/petsclogformat.py:255: SyntaxWarning: invalid escape sequence '\c' 131s print("\centering") 131s /usr/share/petsc/3.24/lib/petsc/bin/petsclogformat.py:258: SyntaxWarning: invalid escape sequence '\m' 131s print(" & & \multicolumn{4}{c}{--------------- Percent of -------------} & \\\\") 131s /usr/share/petsc/3.24/lib/petsc/bin/petsclogformat.py:260: SyntaxWarning: invalid escape sequence '\h' 131s print("\hline") 131s /usr/share/petsc/3.24/lib/petsc/bin/petsclogformat.py:320: SyntaxWarning: invalid escape sequence '\e' 131s print("\end{tabular}") 131s /usr/share/petsc/3.24/lib/petsc/bin/petsclogformat.py:321: SyntaxWarning: invalid escape sequence '\e' 131s print("\end{table}") 131s /usr/share/petsc/3.24/lib/petsc/bin/petsclogformat.py:322: SyntaxWarning: invalid escape sequence '\e' 131s print("\end{document}") 131s Setting up libpetsc-real3.24-dev:amd64 (3.24.3+dfsg1-1ubuntu1) ... 131s update-alternatives: error: no alternatives for petsc 131s update-alternatives: using /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real to provide /usr/lib/petsc (petsc) in auto mode 131s update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.24.3 to provide /usr/lib/x86_64-linux-gnu/libpetsc_real.so (libpetsc_real.so) in auto mode 131s update-alternatives: using /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real to provide /usr/lib/petscdir/3.24 (petsc3.24) in auto mode 131s Setting up libslepc-real3.24-dev (3.24.2+dfsg1-1) ... 131s update-alternatives: error: no alternatives for slepc 131s update-alternatives: using /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real to provide /usr/lib/slepc (slepc) in auto mode 131s update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.24.2 to provide /usr/lib/x86_64-linux-gnu/libslepc_real.so (libslepc_real.so) in auto mode 131s update-alternatives: using /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real to provide /usr/lib/slepcdir/3.24 (slepc3.24) in auto mode 131s Setting up libadios2-mpi-plugins:amd64 (2.10.2+dfsg1-5build2) ... 131s Setting up libadios2-mpi-c-2.10:amd64 (2.10.2+dfsg1-5build2) ... 131s Setting up libadios2-mpi-auxiliary-2.10:amd64 (2.10.2+dfsg1-5build2) ... 131s Setting up libadios2-mpi-core-2.10:amd64 (2.10.2+dfsg1-5build2) ... 131s Setting up libadios2-mpi-c++11-2.10:amd64 (2.10.2+dfsg1-5build2) ... 131s Setting up libadios2-mpi-auxiliary-dev:amd64 (2.10.2+dfsg1-5build2) ... 131s Setting up libdolfinx-real0.10:amd64 (1:0.10.0.post5-4) ... 131s Setting up libadios2-mpi-core-dev (2.10.2+dfsg1-5build2) ... 131s Setting up libdolfinx-real-dev:amd64 (1:0.10.0.post5-4) ... 131s Setting up fenicsx-performance-tests (0.10.0-2) ... 131s Setting up libadios2-mpi-c++11-dev:amd64 (2.10.2+dfsg1-5build2) ... 131s Setting up libdolfinx-dev:amd64 (1:0.10.0.post5-4) ... 131s Processing triggers for install-info (7.2-5) ... 131s Processing triggers for libc-bin (2.42-2ubuntu4) ... 131s Processing triggers for man-db (2.13.1-1) ... 134s autopkgtest [19:38:34]: test dolfinx-performance-test-binary: [----------------------- 134s ==== elasticity weak scaling (2 processes with ndofs=10000) ==== 135s [2026-02-01 19:38:34.767] [RANK: 0] [info] Using partitioner with cell data (1 cell types) 135s [2026-02-01 19:38:34.767] [RANK: 0] [info] Compute partition of cells across ranks 135s [2026-02-01 19:38:34.767] [RANK: 0] [info] Building mesh dual graph 135s [2026-02-01 19:38:34.767] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 135s [2026-02-01 19:38:34.782] [RANK: 0] [info] Build nonlocal part of mesh dual graph 135s [2026-02-01 19:38:34.783] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 135s [2026-02-01 19:38:34.783] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 135s [2026-02-01 19:38:34.783] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 1, 1 135s [2026-02-01 19:38:34.785] [RANK: 0] [info] Graph edges (local: 65536, non-local: 578) 135s [2026-02-01 19:38:34.785] [RANK: 0] [info] Compute graph partition using PT-SCOTCH 135s [2026-02-01 19:38:35.472] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 135s [2026-02-01 19:38:35.474] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 135s [2026-02-01 19:38:35.495] [RANK: 0] [info] Extract basic topology: 68140->68140 135s [2026-02-01 19:38:35.495] [RANK: 0] [info] Build local dual graphs, re-order cells, and compute process boundary vertices. 135s [2026-02-01 19:38:35.495] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 135s [2026-02-01 19:38:35.527] [RANK: 0] [info] GPS pseudo-diameter:(107) 2188-15518 135s [2026-02-01 19:38:35.529] [RANK: 0] [info] Create topology (generalised) 135s [2026-02-01 19:38:35.532] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 135s [2026-02-01 19:38:35.540] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 135s [2026-02-01 19:38:35.547] [RANK: 0] [info] Compute ghost indices 135s [2026-02-01 19:38:35.548] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 135s [2026-02-01 19:38:35.548] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 135s [2026-02-01 19:38:35.549] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 135s [2026-02-01 19:38:35.549] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 135s [2026-02-01 19:38:35.554] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 135s [2026-02-01 19:38:35.554] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 135s [2026-02-01 19:38:35.555] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 135s [2026-02-01 19:38:35.555] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 135s [2026-02-01 19:38:35.556] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 135s [2026-02-01 19:38:35.557] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 135s [2026-02-01 19:38:35.557] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 135s [2026-02-01 19:38:35.557] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 135s [2026-02-01 19:38:35.557] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 135s [2026-02-01 19:38:35.557] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 1, 0.5 135s [2026-02-01 19:38:35.557] [RANK: 0] [info] Create Geometry (multiple) 135s [2026-02-01 19:38:35.557] [RANK: 0] [info] Got 1 dof layouts 135s [2026-02-01 19:38:35.557] [RANK: 0] [info] Checking required entities per dimension 135s [2026-02-01 19:38:35.558] [RANK: 0] [info] Cell type: 0 dofmap: 17035x4 135s [2026-02-01 19:38:35.559] [RANK: 0] [info] Global index computation 135s [2026-02-01 19:38:35.559] [RANK: 0] [info] Got 1 index_maps 135s [2026-02-01 19:38:35.559] [RANK: 0] [info] Get global indices 135s [2026-02-01 19:38:35.559] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 135s [2026-02-01 19:38:35.559] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 135s [2026-02-01 19:38:35.560] [RANK: 0] [info] Calling compute_local_to_global 135s [2026-02-01 19:38:35.560] [RANK: 0] [info] xdofs.size = 68140 135s [2026-02-01 19:38:35.560] [RANK: 0] [info] dofmap sizes = 68140 135s [2026-02-01 19:38:35.560] [RANK: 0] [info] all_dofmaps.size = 68140 135s [2026-02-01 19:38:35.560] [RANK: 0] [info] nodes.size = 3506 135s [2026-02-01 19:38:35.561] [RANK: 0] [info] Creating geometry with 1 dofmaps 135s UnitCube (18x15x21) to be refined 0 times 135s [2026-02-01 19:38:35.561] [RANK: 0] [info] Computing mesh entities of dimension 2 135s [2026-02-01 19:38:35.572] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 135s [2026-02-01 19:38:35.572] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 135s [2026-02-01 19:38:35.586] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 135s [2026-02-01 19:38:35.586] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 135s [2026-02-01 19:38:35.587] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 135s [2026-02-01 19:38:35.587] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. 135s [2026-02-01 19:38:35.587] [RANK: 0] [info] Checking required entities per dimension 135s [2026-02-01 19:38:35.587] [RANK: 0] [info] Cell type: 0 dofmap: 17035x4 135s [2026-02-01 19:38:35.588] [RANK: 0] [info] Global index computation 135s [2026-02-01 19:38:35.589] [RANK: 0] [info] Got 1 index_maps 135s [2026-02-01 19:38:35.589] [RANK: 0] [info] Get global indices 135s [2026-02-01 19:38:35.589] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 135s [2026-02-01 19:38:35.589] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 135s [2026-02-01 19:38:35.589] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) 135s [2026-02-01 19:38:35.599] [RANK: 0] [info] Column ghost size increased from 158 to 399 136s ---------------------------------------------------------------- 136s Test problem summary 136s dolfinx version: 0.10.0 136s dolfinx hash: ubuntu 136s ufl hash: 58f3dc30e5e56245b795ae796fe6a103649e8345 136s petsc version: PETSc Release Version 3.24.3, Jan 01, 2026 136s Problem type: elasticity 136s Scaling type: weak 136s Num processes: 2 136s Num cells: 34020 (34 thousand) 136s Total degrees of freedom: 20064 (20.1 thousand) 136s Average degrees of freedom per process: 10032 136s ---------------------------------------------------------------- 136s [2026-02-01 19:38:35.678] [RANK: 0] [info] PETSc Krylov solver starting to solve system. 136s KSP Object: 2 MPI processes 136s type: cg 136s maximum iterations=10000, initial guess is zero 136s tolerances: relative=1e-08, absolute=1e-50, divergence=10000. 136s left preconditioning 136s using PRECONDITIONED norm type for convergence test 136s PC Object: 2 MPI processes 136s type: gamg 136s type is MULTIPLICATIVE, levels=3 cycles=v 136s Cycles per PCApply=1 136s Using externally compute Galerkin coarse grid matrices 136s GAMG specific options 136s Threshold for dropping small values in graph on each level = -1. -1. -1. 136s Threshold scaling factor for each level not specified = 1. 136s AGG specific options 136s Number of levels of aggressive coarsening 1 136s Square graph aggressive coarsening 136s MatCoarsen Object: 2 MPI processes 136s type: misk 136s Number smoothing steps to construct prolongation 1 136s Complexity: grid = 1.0945 operator = 1.36244 136s Per-level complexity: op = operator, int = interpolation 136s #equations | #active PEs | avg nnz/row op | avg nnz/row int 136s 162 1 139 0 136s 1734 2 161 36 136s 20064 2 42 21 136s Coarse grid solver -- level 0 ------------------------------- 136s KSP Object: (mg_coarse_) 2 MPI processes 136s type: preonly 136s maximum iterations=10000, initial guess is zero 136s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 136s left preconditioning 136s using NONE norm type for convergence test 136s PC Object: (mg_coarse_) 2 MPI processes 136s type: bjacobi 136s number of blocks = 2 136s Local solver information for first block is in the following KSP and PC objects on rank 0: 136s Use -mg_coarse_ksp_view ::ascii_info_detail to display information for all blocks 136s KSP Object: (mg_coarse_sub_) 1 MPI process 136s type: preonly 136s maximum iterations=1, initial guess is zero 136s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 136s left preconditioning 136s using NONE norm type for convergence test 136s PC Object: (mg_coarse_sub_) 1 MPI process 136s type: lu 136s out-of-place factorization 136s tolerance for zero pivot 2.22045e-14 136s using diagonal shift on blocks to prevent zero pivot [INBLOCKS] 136s matrix ordering: nd 136s factor fill ratio given 5., needed 1.0416 136s Factored matrix follows: 136s Mat Object: (mg_coarse_sub_) 1 MPI process 136s type: seqaij 136s rows=162, cols=162, bs=6 136s package used to perform factorization: petsc 136s total: nonzeros=23436, allocated nonzeros=23436 136s using I-node routines: found 42 nodes, limit used is 5 136s linear system matrix = precond matrix: 136s Mat Object: (mg_coarse_sub_) 1 MPI process 136s type: seqaij 136s rows=162, cols=162, bs=6 136s total: nonzeros=22500, allocated nonzeros=22500 136s total number of mallocs used during MatSetValues calls=0 136s using I-node routines: found 53 nodes, limit used is 5 136s linear system matrix = precond matrix: 136s Mat Object: 2 MPI processes 136s type: mpiaij 136s rows=162, cols=162, bs=6 136s total: nonzeros=22500, allocated nonzeros=22500 136s total number of mallocs used during MatSetValues calls=0 136s using scalable MatPtAP() implementation 136s using I-node (on process 0) routines: found 53 nodes, limit used is 5 136s Down solver (pre-smoother) on level 1 ------------------------------- 136s KSP Object: (mg_levels_1_) 2 MPI processes 136s type: chebyshev 136s Chebyshev polynomial of first kind 136s eigenvalue targets used: min 0.273512, max 3.00863 136s eigenvalues provided (min 0.0341177, max 2.73512) with transform: [0. 0.1; 0. 1.1] 136s maximum iterations=2, nonzero initial guess 136s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 136s left preconditioning 136s using NONE norm type for convergence test 136s PC Object: (mg_levels_1_) 2 MPI processes 136s type: jacobi 136s type DIAGONAL 136s linear system matrix = precond matrix: 136s Mat Object: 2 MPI processes 136s type: mpiaij 136s rows=1734, cols=1734, bs=6 136s total: nonzeros=277452, allocated nonzeros=277452 136s total number of mallocs used during MatSetValues calls=0 136s using scalable MatPtAP() implementation 136s using I-node (on process 0) routines: found 268 nodes, limit used is 5 136s Up solver (post-smoother) same as down solver (pre-smoother) 136s Down solver (pre-smoother) on level 2 ------------------------------- 136s KSP Object: (mg_levels_2_) 2 MPI processes 136s type: chebyshev 136s Chebyshev polynomial of first kind 136s eigenvalue targets used: min 0.268451, max 2.95296 136s eigenvalues provided (min 0.0744486, max 2.68451) with transform: [0. 0.1; 0. 1.1] 136s maximum iterations=2, nonzero initial guess 136s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 136s left preconditioning 136s using NONE norm type for convergence test 136s PC Object: (mg_levels_2_) 2 MPI processes 136s type: jacobi 136s type DIAGONAL 136s linear system matrix = precond matrix: 136s Mat Object: 2 MPI processes 136s type: mpiaij 136s rows=20064, cols=20064, bs=3 136s total: nonzeros=827586, allocated nonzeros=827586 136s total number of mallocs used during MatSetValues calls=0 136s has attached near null space 136s using I-node (on process 0) routines: found 3348 nodes, limit used is 5 136s Up solver (post-smoother) same as down solver (pre-smoother) 136s linear system matrix = precond matrix: 136s Mat Object: 2 MPI processes 136s type: mpiaij 136s rows=20064, cols=20064, bs=3 136s total: nonzeros=827586, allocated nonzeros=827586 136s total number of mallocs used during MatSetValues calls=0 136s has attached near null space 136s using I-node (on process 0) routines: found 3348 nodes, limit used is 5 136s 136s [MPI_MAX] Summary of timings (s) | reps avg tot 136s ------------------------------------------------------------------------------------------------------- 136s Build BoxMesh (tetrahedra) | 1 0.794943 0.794943 136s Build dofmap data | 2 0.002123 0.004246 136s Compute connectivity 2-0 | 1 0.000355 0.000355 136s Compute dof reordering map | 2 0.000177 0.000353 136s Compute entities of dim = 2 | 1 0.025554 0.025554 136s Compute graph partition (SCOTCH) | 1 0.685503 0.685503 136s Compute local part of mesh dual graph (mixed) | 2 0.022206 0.044412 136s Compute local-to-local map | 1 0.000429 0.000429 136s Compute non-local part of mesh dual graph | 1 0.001962 0.001962 136s Compute-local-to-global links for global/local adjacency list | 1 0.000512 0.000512 136s Distribute fixed-degree adjacency list to destination ranks | 1 0.025124 0.025124 136s Distribute row-wise data (scalable) | 1 0.000885 0.000885 136s GPS: create_level_structure | 3 0.000865 0.002594 136s Gibbs-Poole-Stockmeyer ordering | 1 0.003660 0.003660 136s Init MPI | 1 0.024111 0.024111 136s Init PETSc | 1 0.000685 0.000685 136s Init dofmap from element dofmap | 2 0.001463 0.002926 136s Init logging | 1 0.000005 0.000005 136s PETSc Krylov solver | 1 0.369086 0.369086 136s SparsityPattern::finalize | 1 0.004171 0.004171 136s Topology: create | 1 0.028941 0.028941 136s Topology: determine shared index ownership | 1 0.016480 0.016480 136s Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.000943 0.000943 136s ZZZ Assemble matrix | 1 0.066909 0.066909 136s ZZZ Assemble vector | 1 0.004151 0.004151 136s ZZZ Create Mesh | 1 0.795134 0.795134 136s ZZZ Create RHS function | 1 0.004405 0.004405 136s ZZZ Create boundary conditions | 1 0.000621 0.000621 136s ZZZ Create facets and facet->cell connectivity | 1 0.025978 0.025978 136s ZZZ Create forms | 1 0.000049 0.000049 136s ZZZ Create near-nullspace | 1 0.004039 0.004039 136s ZZZ FunctionSpace | 1 0.002359 0.002359 136s ZZZ Solve | 1 0.371315 0.371315 136s *** Number of Krylov iterations: 19 136s *** Solution norm: 3.00268e-05 136s **************************************************************************************************************************************************************** 136s *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** 136s **************************************************************************************************************************************************************** 136s 136s ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ 136s 136s /usr/bin/dolfinx-scaling-test on a named autopkgtest with 2 processes, by ubuntu on Sun Feb 1 19:38:36 2026 136s Using PETSc Release Version 3.24.3, Jan 01, 2026 136s 136s Max Max/Min Avg Total 136s Time (sec): 1.283e+00 1.000 1.283e+00 136s Objects: 0.000e+00 0.000 0.000e+00 136s Flops: 2.101e+08 1.017 2.084e+08 4.168e+08 136s Flops/sec: 1.638e+08 1.017 1.624e+08 3.248e+08 136s MPI Msg Count: 4.015e+02 1.008 4.000e+02 8.000e+02 136s MPI Msg Len (bytes): 3.621e+06 1.001 9.049e+03 7.239e+06 136s MPI Reductions: 4.610e+02 1.000 136s 136s Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) 136s e.g., VecAXPY() for real vectors of length N --> 2N flops 136s and VecAXPY() for complex vectors of length N --> 8N flops 136s 136s Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- 136s Avg %Total Avg %Total Count %Total Avg %Total Count %Total 136s 0: Main Stage: 1.2830e+00 100.0% 4.1676e+08 100.0% 8.000e+02 100.0% 9.049e+03 100.0% 4.430e+02 96.1% 136s 136s ------------------------------------------------------------------------------------------------------------------------ 136s See the 'Profiling' chapter of the users' manual for details on interpreting output. 136s Phase summary info: 136s Count: number of times phase was executed 136s Time and Flop: Max - maximum over all processes 136s Ratio - ratio of maximum to minimum over all processes 136s Mess: number of messages sent 136s AvgLen: average message length (bytes) 136s Reduct: number of global reductions 136s Global: entire computation 136s Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). 136s %T - percent time in this phase %F - percent flop in this phase 136s %M - percent messages in this phase %L - percent message lengths in this phase 136s %R - percent reductions in this phase 136s Total Mflop/s: 1e-6 * (sum of flop over all processes)/(max time over all processes) 136s ------------------------------------------------------------------------------------------------------------------------ 136s Event Count Time (sec) Flop --- Global --- --- Stage ---- Total 136s Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s 136s ------------------------------------------------------------------------------------------------------------------------ 136s 136s --- Event Stage 0: Main Stage 136s 136s BuildTwoSided 109 1.0 9.8623e-03 2.8 0.00e+00 0.0 5.9e+01 4.0e+00 1.1e+02 1 0 7 0 24 1 0 7 0 25 0 136s BuildTwoSidedF 83 1.0 9.8616e-03 2.8 0.00e+00 0.0 3.2e+01 6.8e+04 8.3e+01 1 0 4 30 18 1 0 4 30 19 0 136s MatMult 199 1.0 3.8939e-02 1.0 1.16e+08 1.0 4.0e+02 6.6e+03 0.0e+00 3 55 50 36 0 3 55 50 36 0 5856 136s MatMultAdd 40 1.0 3.4519e-03 1.1 9.55e+06 1.0 6.0e+01 1.7e+03 0.0e+00 0 5 8 1 0 0 5 8 1 0 5513 136s MatMultTranspose 40 1.0 5.6927e-03 1.0 9.56e+06 1.0 6.0e+01 1.7e+03 0.0e+00 0 5 8 1 0 0 5 8 1 0 3345 136s MatSolve 20 0.0 4.0191e-04 0.0 9.34e+05 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2324 136s MatLUFactorSym 1 1.0 5.6591e-04 101.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 136s MatLUFactorNum 1 1.0 9.8932e-04 543.0 2.15e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2171 136s MatScale 6 1.0 4.5324e-04 1.0 5.78e+05 1.0 4.0e+00 1.9e+03 0.0e+00 0 0 0 0 0 0 0 0 0 0 2539 136s MatResidual 40 1.0 7.5543e-03 1.0 2.25e+07 1.0 8.0e+01 6.3e+03 0.0e+00 1 11 10 7 0 1 11 10 7 0 5851 136s MatAssemblyBegin 45 1.0 1.7863e-02 1.6 0.00e+00 0.0 3.2e+01 6.8e+04 2.3e+01 1 0 4 30 5 1 0 4 30 5 0 136s MatAssemblyEnd 45 1.0 1.5900e-02 1.0 4.23e+04 1.1 5.8e+01 5.8e+02 9.0e+01 1 0 7 0 20 1 0 7 0 20 5 136s MatGetRowIJ 1 0.0 2.1092e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 136s MatCreateSubMat 1 1.0 2.0915e-03 1.0 0.00e+00 0.0 2.0e+00 3.0e+02 1.5e+01 0 0 0 0 3 0 0 0 0 3 0 136s MatGetOrdering 1 0.0 5.8087e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 136s MatCoarsen 2 1.0 7.3297e-04 1.0 0.00e+00 0.0 3.7e+01 8.6e+02 3.6e+01 0 0 5 0 8 0 0 5 0 8 0 136s MatZeroEntries 2 1.0 4.2654e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 136s MatView 6 1.5 3.1192e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 136s MatAXPY 4 1.0 5.3870e-03 1.0 1.16e+05 1.0 8.0e+00 4.6e+02 1.4e+01 0 0 1 0 3 0 0 1 0 3 43 136s MatTranspose 9 1.0 3.7090e-03 1.0 0.00e+00 0.0 3.5e+01 2.2e+03 2.7e+01 0 0 4 1 6 0 0 4 1 6 0 136s MatMatMultSym 6 1.0 3.3898e-02 1.0 0.00e+00 0.0 2.0e+01 1.2e+04 2.0e+01 3 0 2 3 4 3 0 2 3 5 0 136s MatMatMultNum 2 1.0 7.9413e-03 1.0 6.76e+06 1.0 4.0e+00 3.8e+04 2.0e+00 1 3 0 2 0 1 3 0 2 0 1670 136s MatPtAPSymbolic 2 1.0 1.4172e-01 1.0 0.00e+00 0.0 2.1e+01 6.5e+04 1.4e+01 11 0 3 19 3 11 0 3 19 3 0 136s MatPtAPNumeric 2 1.0 1.0004e-01 1.0 5.55e+07 1.0 1.0e+01 1.2e+05 1.2e+01 8 26 1 16 3 8 26 1 16 3 1084 136s MatTrnMatMultSym 1 1.0 1.7802e-02 1.0 0.00e+00 0.0 1.4e+01 3.5e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 136s MatGetLocalMat 7 1.0 2.6627e-03 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 136s MatGetBrAoCol 6 1.0 1.3602e-03 1.0 0.00e+00 0.0 2.8e+01 5.2e+04 0.0e+00 0 0 4 20 0 0 0 4 20 0 0 136s MatCreateGraph 2 1.0 1.0477e-02 1.0 1.50e+05 1.0 4.8e+01 1.9e+03 5.0e+01 1 0 6 1 11 1 0 6 1 11 29 136s VecMDot 20 1.0 1.0061e-03 1.0 1.20e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 5 2383 136s VecTDot 40 1.0 7.0014e-04 1.1 8.03e+05 1.0 0.0e+00 0.0e+00 4.0e+01 0 0 0 0 9 0 0 0 0 9 2292 136s VecNorm 42 1.0 7.2234e-04 1.2 6.42e+05 1.0 0.0e+00 0.0e+00 4.2e+01 0 0 0 0 9 0 0 0 0 9 1775 136s VecScale 22 1.0 6.2161e-05 1.1 1.20e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 3857 136s VecCopy 124 1.0 2.5830e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 136s VecSet 141 1.0 7.3809e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 136s VecAXPY 40 1.0 1.6636e-04 1.1 7.85e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 9428 136s VecAYPX 258 1.0 9.7289e-04 1.0 2.11e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 4327 136s VecAXPBYCZ 80 1.0 4.6485e-04 1.0 2.19e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 9378 136s VecMAXPY 22 1.0 2.6725e-04 1.0 1.42e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 10603 136s VecAssemblyBegin 61 1.0 4.4839e-04 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+01 0 0 0 0 13 0 0 0 0 14 0 136s VecAssemblyEnd 61 1.0 3.2846e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 136s VecPointwiseMult 182 1.0 6.9964e-04 1.0 9.96e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2835 136s VecReciprocal 8 1.0 9.7387e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 136s VecScatterBegin 343 1.0 1.5271e-03 1.0 0.00e+00 0.0 6.1e+02 5.1e+03 0.0e+00 0 0 76 43 0 0 0 76 43 0 0 136s VecScatterEnd 343 1.0 4.4860e-03 1.7 6.72e+03 1.2 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 3 136s VecNormalize 22 1.0 3.8668e-04 1.3 3.61e+05 1.0 0.0e+00 0.0e+00 2.2e+01 0 0 0 0 5 0 0 0 0 5 1860 136s SFSetGraph 26 1.0 1.0076e-04 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 136s SFSetUp 26 1.0 3.7983e-04 1.0 0.00e+00 0.0 8.6e+01 5.6e+02 2.6e+01 0 0 11 1 6 0 0 11 1 6 0 136s SFBcastBegin 8 1.0 2.3277e-05 1.1 0.00e+00 0.0 1.6e+01 1.6e+03 0.0e+00 0 0 2 0 0 0 0 2 0 0 0 136s SFBcastEnd 8 1.0 2.5620e-05 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 136s SFReduceBegin 3 1.0 2.7692e-05 1.0 0.00e+00 0.0 5.0e+00 7.4e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 136s SFReduceEnd 3 1.0 9.3150e-06 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 136s SFPack 354 1.0 9.4101e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 136s SFUnpack 354 1.0 5.9090e-05 1.1 6.72e+03 1.2 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 211 136s KSPSetUp 1 1.0 1.9709e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 136s KSPSolve 1 1.0 5.0770e-02 1.0 1.31e+08 1.0 4.8e+02 5.4e+03 8.0e+01 4 63 60 36 17 4 63 60 36 18 5151 136s KSPGMRESOrthog 20 1.0 1.2493e-03 1.0 2.41e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 5 3838 136s PCSetUp_GAMG+ 1 1.0 3.1613e-01 1.0 7.72e+07 1.0 3.0e+02 1.4e+04 3.1e+02 25 36 38 58 67 25 36 38 58 70 478 136s PCGAMGCreateG 2 1.0 1.0480e-02 1.0 1.50e+05 1.0 4.8e+01 1.9e+03 5.0e+01 1 0 6 1 11 1 0 6 1 11 29 136s GAMG Coarsen 4 1.0 1.9891e-02 1.0 0.00e+00 0.0 6.1e+01 9.4e+03 5.3e+01 2 0 8 8 11 2 0 8 8 12 0 136s GAMG MIS/Agg 2 1.0 1.8616e-02 1.0 0.00e+00 0.0 5.1e+01 1.0e+04 4.9e+01 1 0 6 7 11 1 0 6 7 11 0 136s PCGAMGProl 2 1.0 6.8029e-03 1.0 0.00e+00 0.0 8.7e+01 3.6e+03 7.6e+01 1 0 11 4 16 1 0 11 4 17 0 136s GAMG Prol-col 2 1.0 2.9191e-03 1.0 0.00e+00 0.0 7.5e+01 3.0e+03 5.6e+01 0 0 9 3 12 0 0 9 3 13 0 136s GAMG Prol-lift 2 1.0 3.6911e-03 1.0 0.00e+00 0.0 1.2e+01 7.7e+03 1.2e+01 0 0 2 1 3 0 0 2 1 3 0 136s PCGAMGOptProl 2 1.0 3.4167e-02 1.0 2.16e+07 1.0 6.4e+01 1.0e+04 6.6e+01 3 10 8 9 14 3 10 8 9 15 1243 136s GAMG smooth 2 1.0 2.6995e-02 1.0 7.30e+06 1.0 2.4e+01 1.6e+04 2.4e+01 2 3 3 5 5 2 3 3 5 5 531 136s PCGAMGCreateL 2 1.0 2.4399e-01 1.0 5.55e+07 1.0 4.2e+01 6.1e+04 6.0e+01 19 26 5 35 13 19 26 5 35 14 445 136s GAMG PtAP 2 1.0 2.4170e-01 1.0 5.55e+07 1.0 3.1e+01 8.2e+04 2.6e+01 19 26 4 35 6 19 26 4 35 6 449 136s GAMG Reduce 1 1.0 7.7856e-02 1.0 1.87e+07 1.3 2.2e+01 3.7e+04 4.7e+01 6 8 3 11 10 6 8 3 11 11 433 136s PCGAMG Squ l00 1 1.0 1.7804e-02 1.0 0.00e+00 0.0 1.4e+01 3.5e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 136s PCGAMG Gal l00 1 1.0 1.6632e-01 1.0 3.81e+07 1.0 2.0e+01 8.8e+04 1.3e+01 13 18 2 24 3 13 18 2 24 3 450 136s PCGAMG Opt l00 1 1.0 1.8300e-02 1.0 4.97e+06 1.0 1.2e+01 2.5e+04 1.1e+01 1 2 2 4 2 1 2 2 4 2 543 136s PCGAMG Gal l01 1 1.0 7.5572e-02 1.0 1.87e+07 1.3 1.1e+01 7.2e+04 1.3e+01 6 8 1 11 3 6 8 1 11 3 446 136s PCGAMG Opt l01 1 1.0 6.1260e-03 1.0 1.80e+06 1.2 1.2e+01 7.8e+03 1.1e+01 0 1 2 1 2 0 1 2 1 2 543 136s PCSetUp 1 1.0 3.1613e-01 1.0 7.72e+07 1.0 3.0e+02 1.4e+04 3.1e+02 25 36 38 58 67 25 36 38 58 70 478 136s PCSetUpOnBlocks 20 1.0 1.6889e-03 19.0 2.15e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1272 136s PCApply 20 1.0 4.4344e-02 1.0 1.13e+08 1.0 4.4e+02 5.0e+03 2.0e+01 3 54 55 31 4 3 54 55 31 5 5092 136s PCApplyOnBlocks 20 1.0 4.3297e-04 9.4 9.34e+05 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2158 136s ------------------------------------------------------------------------------------------------------------------------ 136s 136s Object Type Creations Destructions. Reports information only for process 0. 136s 136s --- Event Stage 0: Main Stage 136s 136s Container 11 11 136s Matrix 82 82 136s Matrix Coarsen 2 2 136s Matrix Null Space 1 1 136s Index Set 60 60 136s IS L to G Mapping 5 5 136s Vector 179 179 136s Star Forest Graph 34 34 136s Krylov Solver 7 7 136s Preconditioner 7 7 136s Viewer 2 2 136s PetscRandom 2 2 136s Distributed Mesh 4 4 136s Discrete System 4 4 136s Weak Form 4 4 136s ======================================================================================================================== 136s Average time to get PetscTime(): 5.81e-08 136s Average time for MPI_Barrier(): 9.956e-07 136s Average time for zero size MPI_Send(): 1.0415e-06 136s #PETSc Option Table entries: 136s --ndofs 10000 # (source: command line) 136s --problem_type elasticity # (source: command line) 136s --scaling_type weak # (source: command line) 136s -ksp_rtol 1.0e-8 # (source: command line) 136s -ksp_type cg # (source: command line) 136s -ksp_view # (source: command line) 136s -log_view # (source: command line) 136s -matptap_via scalable # (source: command line) 136s -mg_levels_esteig_ksp_type cg # (source: command line) 136s -mg_levels_ksp_type chebyshev # (source: command line) 136s -mg_levels_pc_type jacobi # (source: command line) 136s -options_left # (source: command line) 136s -pc_gamg_coarse_eq_limit 1000 # (source: command line) 136s -pc_type gamg # (source: command line) 136s #End of PETSc Option Table entries 136s Compiled without FORTRAN kernels 136s Compiled with full precision matrices (default) 136s sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 136s Configure options: --build=x86_64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --with-library-name-suffix=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi " --CXX_LINKER_FLAGS="-Wl,--no-as-needed -Wl,-z,defs" --CC_LINKER_FLAGS=-Wl,-z,defs --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real --PETSC_ARCH=x86_64-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" CXXFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" FCFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=3" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,--package-metadata=%7B%22type%22:%22deb%22%2C%22os%22:%22ubuntu%22%2C%22name%22:%22petsc%22%2C%22version%22:%223.24.3+dfsg1-1ubuntu1%22%2C%22architecture%22:%22amd64%22%7D -flto=auto -ffat-lto-objects -Wl,-z,relro -fPIC" MAKEFLAGS= 136s ----------------------------------------- 136s Libraries compiled on 2026-01-26 06:54:57 on reproducible 136s Machine characteristics: Linux-6.8.0-90-generic-x86_64-with-glibc2.42 136s Using PETSc directory: /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real 136s Using PETSc arch: 136s ----------------------------------------- 136s 136s Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -Wdate-time -D_FORTIFY_SOURCE=3 136s Using Fortran compiler: mpif90 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=3 136s ----------------------------------------- 136s 136s Using include paths: -I/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu-dist -I/usr/include/superlu -I/usr/include/scotch -I/usr/include/hdf5/openmpi 136s ----------------------------------------- 136s 136s Using C linker: mpicc 136s Using Fortran linker: mpif90 136s Using libraries: -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/gcc/x86_64-linux-gnu/15 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -lfftw3 -lfftw3_mpi -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu_dist -lsuperlu -llapack -lblas -lptesmumps -lptscotch -lscotch -lptscotcherr -lhdf5 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lm -lOpenCL -lyaml -lX11 -lstdc++ -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ 136s ----------------------------------------- 136s 136s #PETSc Option Table entries: 136s --ndofs 10000 # (source: command line) 136s --problem_type elasticity # (source: command line) 136s --scaling_type weak # (source: command line) 136s -ksp_rtol 1.0e-8 # (source: command line) 136s -ksp_type cg # (source: command line) 136s -ksp_view # (source: command line) 136s -log_view # (source: command line) 136s -matptap_via scalable # (source: command line) 136s -mg_levels_esteig_ksp_type cg # (source: command line) 136s -mg_levels_ksp_type chebyshev # (source: command line) 136s -mg_levels_pc_type jacobi # (source: command line) 136s -options_left # (source: command line) 136s -pc_gamg_coarse_eq_limit 1000 # (source: command line) 136s -pc_type gamg # (source: command line) 136s #End of PETSc Option Table entries 136s WARNING! There are options you set that were not used! 136s WARNING! could be spelling mistake, etc! 136s There are 4 unused database options. They are: 136s Option left: name:--ndofs value: 10000 source: command line 136s Option left: name:--problem_type value: elasticity source: command line 136s Option left: name:--scaling_type value: weak source: command line 136s Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line 136s ==== elasticity strong scaling (2 processes with ndofs=20000) ==== 136s [2026-02-01 19:38:36.332] [RANK: 0] [info] Using partitioner with cell data (1 cell types) 136s [2026-02-01 19:38:36.332] [RANK: 0] [info] Compute partition of cells across ranks 136s [2026-02-01 19:38:36.332] [RANK: 0] [info] Building mesh dual graph 136s [2026-02-01 19:38:36.332] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 136s [2026-02-01 19:38:36.348] [RANK: 0] [info] Build nonlocal part of mesh dual graph 136s [2026-02-01 19:38:36.348] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 136s [2026-02-01 19:38:36.348] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 136s [2026-02-01 19:38:36.348] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 1, 1 136s [2026-02-01 19:38:36.349] [RANK: 0] [info] Graph edges (local: 65536, non-local: 578) 136s [2026-02-01 19:38:36.349] [RANK: 0] [info] Compute graph partition using PT-SCOTCH 137s [2026-02-01 19:38:37.034] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 137s [2026-02-01 19:38:37.040] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 137s [2026-02-01 19:38:37.060] [RANK: 0] [info] Extract basic topology: 68372->68372 137s [2026-02-01 19:38:37.060] [RANK: 0] [info] Build local dual graphs, re-order cells, and compute process boundary vertices. 137s [2026-02-01 19:38:37.060] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 137s [2026-02-01 19:38:37.082] [RANK: 0] [info] GPS pseudo-diameter:(105) 16990-2339 137s [2026-02-01 19:38:37.085] [RANK: 0] [info] Create topology (generalised) 137s [2026-02-01 19:38:37.086] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 137s [2026-02-01 19:38:37.086] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 137s [2026-02-01 19:38:37.091] [RANK: 0] [info] Compute ghost indices 137s [2026-02-01 19:38:37.091] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 137s [2026-02-01 19:38:37.091] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 137s [2026-02-01 19:38:37.092] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 137s [2026-02-01 19:38:37.092] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 137s [2026-02-01 19:38:37.097] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 137s [2026-02-01 19:38:37.097] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 137s [2026-02-01 19:38:37.097] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 137s [2026-02-01 19:38:37.098] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 137s [2026-02-01 19:38:37.099] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 137s [2026-02-01 19:38:37.099] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 137s [2026-02-01 19:38:37.099] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 137s [2026-02-01 19:38:37.099] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 137s [2026-02-01 19:38:37.100] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 137s [2026-02-01 19:38:37.100] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 1, 0.5 137s [2026-02-01 19:38:37.100] [RANK: 0] [info] Create Geometry (multiple) 137s [2026-02-01 19:38:37.100] [RANK: 0] [info] Got 1 dof layouts 137s [2026-02-01 19:38:37.100] [RANK: 0] [info] Checking required entities per dimension 137s [2026-02-01 19:38:37.100] [RANK: 0] [info] Cell type: 0 dofmap: 17093x4 137s [2026-02-01 19:38:37.101] [RANK: 0] [info] Global index computation 137s [2026-02-01 19:38:37.101] [RANK: 0] [info] Got 1 index_maps 137s [2026-02-01 19:38:37.101] [RANK: 0] [info] Get global indices 137s [2026-02-01 19:38:37.102] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 137s [2026-02-01 19:38:37.102] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 137s [2026-02-01 19:38:37.102] [RANK: 0] [info] Calling compute_local_to_global 137s [2026-02-01 19:38:37.102] [RANK: 0] [info] xdofs.size = 68372 137s [2026-02-01 19:38:37.102] [RANK: 0] [info] dofmap sizes = 68372 137s [2026-02-01 19:38:37.102] [RANK: 0] [info] all_dofmaps.size = 68372 137s [2026-02-01 19:38:37.102] [RANK: 0] [info] nodes.size = 3505 137s [2026-02-01 19:38:37.103] [RANK: 0] [info] Creating geometry with 1 dofmaps 137s UnitCube (18x15x21) to be refined 0 times 137s [2026-02-01 19:38:37.103] [RANK: 0] [info] Computing mesh entities of dimension 2 137s [2026-02-01 19:38:37.115] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 137s [2026-02-01 19:38:37.115] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 137s [2026-02-01 19:38:37.128] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 137s [2026-02-01 19:38:37.128] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 137s [2026-02-01 19:38:37.129] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 137s [2026-02-01 19:38:37.129] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. 137s [2026-02-01 19:38:37.129] [RANK: 0] [info] Checking required entities per dimension 137s [2026-02-01 19:38:37.130] [RANK: 0] [info] Cell type: 0 dofmap: 17093x4 137s [2026-02-01 19:38:37.131] [RANK: 0] [info] Global index computation 137s [2026-02-01 19:38:37.131] [RANK: 0] [info] Got 1 index_maps 137s [2026-02-01 19:38:37.131] [RANK: 0] [info] Get global indices 137s [2026-02-01 19:38:37.131] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 137s [2026-02-01 19:38:37.131] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 137s [2026-02-01 19:38:37.132] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) 137s [2026-02-01 19:38:37.142] [RANK: 0] [info] Column ghost size increased from 154 to 403 137s ---------------------------------------------------------------- 137s Test problem summary 137s dolfinx version: 0.10.0 137s dolfinx hash: ubuntu 137s ufl hash: 58f3dc30e5e56245b795ae796fe6a103649e8345 137s petsc version: PETSc Release Version 3.24.3, Jan 01, 2026 137s Problem type: elasticity 137s Scaling type: strong 137s Num processes: 2 137s Num cells: 34020 (34 thousand) 137s Total degrees of freedom: 20064 (20.1 thousand) 137s Average degrees of freedom per process: 10032 137s ---------------------------------------------------------------- 137s [2026-02-01 19:38:37.219] [RANK: 0] [info] PETSc Krylov solver starting to solve system. 137s KSP Object: 2 MPI processes 137s type: cg 137s maximum iterations=10000, initial guess is zero 137s tolerances: relative=1e-08, absolute=1e-50, divergence=10000. 137s left preconditioning 137s using PRECONDITIONED norm type for convergence test 137s PC Object: 2 MPI processes 137s type: gamg 137s type is MULTIPLICATIVE, levels=3 cycles=v 137s Cycles per PCApply=1 137s Using externally compute Galerkin coarse grid matrices 137s GAMG specific options 137s Threshold for dropping small values in graph on each level = -1. -1. -1. 137s Threshold scaling factor for each level not specified = 1. 137s AGG specific options 137s Number of levels of aggressive coarsening 1 137s Square graph aggressive coarsening 137s MatCoarsen Object: 2 MPI processes 137s type: misk 137s Number smoothing steps to construct prolongation 1 137s Complexity: grid = 1.0933 operator = 1.35078 137s Per-level complexity: op = operator, int = interpolation 137s #equations | #active PEs | avg nnz/row op | avg nnz/row int 137s 156 1 143 0 137s 1716 2 157 36 137s 20064 2 42 21 137s Coarse grid solver -- level 0 ------------------------------- 137s KSP Object: (mg_coarse_) 2 MPI processes 137s type: preonly 137s maximum iterations=10000, initial guess is zero 137s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 137s left preconditioning 137s using NONE norm type for convergence test 137s PC Object: (mg_coarse_) 2 MPI processes 137s type: bjacobi 137s number of blocks = 2 137s Local solver information for first block is in the following KSP and PC objects on rank 0: 137s Use -mg_coarse_ksp_view ::ascii_info_detail to display information for all blocks 137s KSP Object: (mg_coarse_sub_) 1 MPI process 137s type: preonly 137s maximum iterations=1, initial guess is zero 137s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 137s left preconditioning 137s using NONE norm type for convergence test 137s PC Object: (mg_coarse_sub_) 1 MPI process 137s type: lu 137s out-of-place factorization 137s tolerance for zero pivot 2.22045e-14 137s using diagonal shift on blocks to prevent zero pivot [INBLOCKS] 137s matrix ordering: nd 137s factor fill ratio given 5., needed 1.05195 137s Factored matrix follows: 137s Mat Object: (mg_coarse_sub_) 1 MPI process 137s type: seqaij 137s rows=156, cols=156, bs=6 137s package used to perform factorization: petsc 137s total: nonzeros=23328, allocated nonzeros=23328 137s using I-node routines: found 34 nodes, limit used is 5 137s linear system matrix = precond matrix: 137s Mat Object: (mg_coarse_sub_) 1 MPI process 137s type: seqaij 137s rows=156, cols=156, bs=6 137s total: nonzeros=22176, allocated nonzeros=22176 137s total number of mallocs used during MatSetValues calls=0 137s using I-node routines: found 47 nodes, limit used is 5 137s linear system matrix = precond matrix: 137s Mat Object: 2 MPI processes 137s type: mpiaij 137s rows=156, cols=156, bs=6 137s total: nonzeros=22176, allocated nonzeros=22176 137s total number of mallocs used during MatSetValues calls=0 137s using scalable MatPtAP() implementation 137s using I-node (on process 0) routines: found 47 nodes, limit used is 5 137s Down solver (pre-smoother) on level 1 ------------------------------- 137s KSP Object: (mg_levels_1_) 2 MPI processes 137s type: chebyshev 137s Chebyshev polynomial of first kind 137s eigenvalue targets used: min 0.283055, max 3.1136 137s eigenvalues provided (min 0.00856649, max 2.83055) with transform: [0. 0.1; 0. 1.1] 137s maximum iterations=2, nonzero initial guess 137s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 137s left preconditioning 137s using NONE norm type for convergence test 137s PC Object: (mg_levels_1_) 2 MPI processes 137s type: jacobi 137s type DIAGONAL 137s linear system matrix = precond matrix: 137s Mat Object: 2 MPI processes 137s type: mpiaij 137s rows=1716, cols=1716, bs=6 137s total: nonzeros=268128, allocated nonzeros=268128 137s total number of mallocs used during MatSetValues calls=0 137s using scalable MatPtAP() implementation 137s using I-node (on process 0) routines: found 264 nodes, limit used is 5 137s Up solver (post-smoother) same as down solver (pre-smoother) 137s Down solver (pre-smoother) on level 2 ------------------------------- 137s KSP Object: (mg_levels_2_) 2 MPI processes 137s type: chebyshev 137s Chebyshev polynomial of first kind 137s eigenvalue targets used: min 0.267284, max 2.94013 137s eigenvalues provided (min 0.0726541, max 2.67284) with transform: [0. 0.1; 0. 1.1] 137s maximum iterations=2, nonzero initial guess 137s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 137s left preconditioning 137s using NONE norm type for convergence test 137s PC Object: (mg_levels_2_) 2 MPI processes 137s type: jacobi 137s type DIAGONAL 137s linear system matrix = precond matrix: 137s Mat Object: 2 MPI processes 137s type: mpiaij 137s rows=20064, cols=20064, bs=3 137s total: nonzeros=827586, allocated nonzeros=827586 137s total number of mallocs used during MatSetValues calls=0 137s has attached near null space 137s using I-node (on process 0) routines: found 3351 nodes, limit used is 5 137s Up solver (post-smoother) same as down solver (pre-smoother) 137s linear system matrix = precond matrix: 137s Mat Object: 2 MPI processes 137s type: mpiaij 137s rows=20064, cols=20064, bs=3 137s total: nonzeros=827586, allocated nonzeros=827586 137s total number of mallocs used during MatSetValues calls=0 137s has attached near null space 137s using I-node (on process 0) routines: found 3351 nodes, limit used is 5 137s 137s [MPI_MAX] Summary of timings (s) | reps avg tot 137s ------------------------------------------------------------------------------------------------------- 137s Build BoxMesh (tetrahedra) | 1 0.772518 0.772518 137s Build dofmap data | 2 0.002194 0.004387 137s Compute connectivity 2-0 | 1 0.000415 0.000415 137s Compute dof reordering map | 2 0.000248 0.000496 137s Compute entities of dim = 2 | 1 0.025327 0.025327 137s Compute graph partition (SCOTCH) | 1 0.681933 0.681933 137s Compute local part of mesh dual graph (mixed) | 2 0.018088 0.036176 137s Compute local-to-local map | 1 0.000473 0.000473 137s Compute non-local part of mesh dual graph | 1 0.001604 0.001604 137s Compute-local-to-global links for global/local adjacency list | 1 0.000507 0.000507 137s Distribute fixed-degree adjacency list to destination ranks | 1 0.029034 0.029034 137s Distribute row-wise data (scalable) | 1 0.000673 0.000673 137s GPS: create_level_structure | 4 0.000181 0.000725 137s Gibbs-Poole-Stockmeyer ordering | 1 0.001836 0.001836 137s Init MPI | 1 0.017722 0.017722 137s Init PETSc | 1 0.000637 0.000637 137s Init dofmap from element dofmap | 2 0.001452 0.002904 137s Init logging | 1 0.000005 0.000005 137s PETSc Krylov solver | 1 0.372413 0.372413 137s SparsityPattern::finalize | 1 0.004320 0.004320 137s Topology: create | 1 0.016732 0.016732 137s Topology: determine shared index ownership | 1 0.004466 0.004466 137s Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.001199 0.001199 137s ZZZ Assemble matrix | 1 0.066331 0.066331 137s ZZZ Assemble vector | 1 0.004213 0.004213 137s ZZZ Create Mesh | 1 0.772633 0.772633 137s ZZZ Create RHS function | 1 0.004607 0.004607 137s ZZZ Create boundary conditions | 1 0.000562 0.000562 137s ZZZ Create facets and facet->cell connectivity | 1 0.025788 0.025788 137s ZZZ Create forms | 1 0.000049 0.000049 137s ZZZ Create near-nullspace | 1 0.004015 0.004015 137s ZZZ FunctionSpace | 1 0.002520 0.002520 137s ZZZ Solve | 1 0.374278 0.374278 137s *** Number of Krylov iterations: 19 137s *** Solution norm: 3.00268e-05 137s **************************************************************************************************************************************************************** 137s *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** 137s **************************************************************************************************************************************************************** 137s 137s ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ 137s 137s /usr/bin/dolfinx-scaling-test on a named autopkgtest with 2 processes, by ubuntu on Sun Feb 1 19:38:37 2026 137s Using PETSc Release Version 3.24.3, Jan 01, 2026 137s 137s Max Max/Min Avg Total 137s Time (sec): 1.262e+00 1.000 1.262e+00 137s Objects: 0.000e+00 0.000 0.000e+00 137s Flops: 2.081e+08 1.020 2.061e+08 4.121e+08 137s Flops/sec: 1.648e+08 1.020 1.632e+08 3.264e+08 137s MPI Msg Count: 4.005e+02 1.008 3.990e+02 7.980e+02 137s MPI Msg Len (bytes): 3.616e+06 1.001 9.060e+03 7.230e+06 137s MPI Reductions: 4.600e+02 1.000 137s 137s Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) 137s e.g., VecAXPY() for real vectors of length N --> 2N flops 137s and VecAXPY() for complex vectors of length N --> 8N flops 137s 137s Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- 137s Avg %Total Avg %Total Count %Total Avg %Total Count %Total 137s 0: Main Stage: 1.2624e+00 100.0% 4.1211e+08 100.0% 7.980e+02 100.0% 9.060e+03 100.0% 4.420e+02 96.1% 137s 137s ------------------------------------------------------------------------------------------------------------------------ 137s See the 'Profiling' chapter of the users' manual for details on interpreting output. 137s Phase summary info: 137s Count: number of times phase was executed 137s Time and Flop: Max - maximum over all processes 137s Ratio - ratio of maximum to minimum over all processes 137s Mess: number of messages sent 137s AvgLen: average message length (bytes) 137s Reduct: number of global reductions 137s Global: entire computation 137s Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). 137s %T - percent time in this phase %F - percent flop in this phase 137s %M - percent messages in this phase %L - percent message lengths in this phase 137s %R - percent reductions in this phase 137s Total Mflop/s: 1e-6 * (sum of flop over all processes)/(max time over all processes) 137s ------------------------------------------------------------------------------------------------------------------------ 137s Event Count Time (sec) Flop --- Global --- --- Stage ---- Total 137s Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s 137s ------------------------------------------------------------------------------------------------------------------------ 137s 137s --- Event Stage 0: Main Stage 137s 137s BuildTwoSided 109 1.0 9.0644e-03 3.8 0.00e+00 0.0 5.9e+01 4.0e+00 1.1e+02 0 0 7 0 24 0 0 7 0 25 0 137s BuildTwoSidedF 83 1.0 9.0673e-03 3.8 0.00e+00 0.0 3.2e+01 6.8e+04 8.3e+01 0 0 4 30 18 0 0 4 30 19 0 137s MatMult 199 1.0 3.9182e-02 1.0 1.15e+08 1.0 4.0e+02 6.6e+03 0.0e+00 3 55 50 37 0 3 55 50 37 0 5777 137s MatMultAdd 40 1.0 3.2294e-03 1.0 9.49e+06 1.0 6.0e+01 1.6e+03 0.0e+00 0 5 8 1 0 0 5 8 1 0 5837 137s MatMultTranspose 40 1.0 5.6720e-03 1.0 9.50e+06 1.0 6.0e+01 1.6e+03 0.0e+00 0 5 8 1 0 0 5 8 1 0 3326 137s MatSolve 20 0.0 3.8700e-04 0.0 9.30e+05 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2403 137s MatLUFactorSym 1 1.0 6.1688e-04 97.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 137s MatLUFactorNum 1 1.0 9.5768e-04 480.5 2.26e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2359 137s MatScale 6 1.0 4.4169e-04 1.0 5.74e+05 1.0 4.0e+00 1.9e+03 0.0e+00 0 0 1 0 0 0 0 1 0 0 2584 137s MatResidual 40 1.0 7.4070e-03 1.0 2.23e+07 1.0 8.0e+01 6.3e+03 0.0e+00 1 11 10 7 0 1 11 10 7 0 5917 137s MatAssemblyBegin 45 1.0 1.6970e-02 1.6 0.00e+00 0.0 3.2e+01 6.8e+04 2.3e+01 1 0 4 30 5 1 0 4 30 5 0 137s MatAssemblyEnd 45 1.0 1.6097e-02 1.0 4.02e+04 1.0 5.8e+01 5.8e+02 9.0e+01 1 0 7 0 20 1 0 7 0 20 5 137s MatGetRowIJ 1 0.0 1.8558e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 137s MatCreateSubMat 1 1.0 2.3139e-03 1.0 0.00e+00 0.0 2.0e+00 3.0e+02 1.5e+01 0 0 0 0 3 0 0 0 0 3 0 137s MatGetOrdering 1 0.0 5.3640e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 137s MatCoarsen 2 1.0 7.4116e-04 1.0 0.00e+00 0.0 3.5e+01 9.0e+02 3.5e+01 0 0 4 0 8 0 0 4 0 8 0 137s MatZeroEntries 2 1.0 4.1582e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 137s MatView 6 1.5 2.9600e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 137s MatAXPY 4 1.0 5.4011e-03 1.0 1.15e+05 1.0 8.0e+00 4.7e+02 1.4e+01 0 0 1 0 3 0 0 1 0 3 43 137s MatTranspose 9 1.0 3.8715e-03 1.1 0.00e+00 0.0 3.5e+01 2.2e+03 2.7e+01 0 0 4 1 6 0 0 4 1 6 0 137s MatMatMultSym 6 1.0 3.3749e-02 1.0 0.00e+00 0.0 2.0e+01 1.2e+04 2.0e+01 3 0 3 3 4 3 0 3 3 5 0 137s MatMatMultNum 2 1.0 7.9814e-03 1.0 6.70e+06 1.0 4.0e+00 3.8e+04 2.0e+00 1 3 1 2 0 1 3 1 2 0 1647 137s MatPtAPSymbolic 2 1.0 1.4121e-01 1.0 0.00e+00 0.0 2.1e+01 6.5e+04 1.4e+01 11 0 3 19 3 11 0 3 19 3 0 137s MatPtAPNumeric 2 1.0 9.8271e-02 1.0 5.45e+07 1.1 1.0e+01 1.2e+05 1.2e+01 8 26 1 16 3 8 26 1 16 3 1078 137s MatTrnMatMultSym 1 1.0 1.7950e-02 1.0 0.00e+00 0.0 1.4e+01 3.5e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 137s MatGetLocalMat 7 1.0 1.7454e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 137s MatGetBrAoCol 6 1.0 1.5254e-03 1.0 0.00e+00 0.0 2.8e+01 5.2e+04 0.0e+00 0 0 4 20 0 0 0 4 20 0 0 137s MatCreateGraph 2 1.0 1.0578e-02 1.0 1.50e+05 1.0 4.8e+01 1.9e+03 5.0e+01 1 0 6 1 11 1 0 6 1 11 28 137s VecMDot 20 1.0 9.9129e-04 1.0 1.20e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 5 2417 137s VecTDot 40 1.0 7.0854e-04 1.0 8.04e+05 1.0 0.0e+00 0.0e+00 4.0e+01 0 0 0 0 9 0 0 0 0 9 2265 137s VecNorm 42 1.0 6.5193e-04 1.1 6.41e+05 1.0 0.0e+00 0.0e+00 4.2e+01 0 0 0 0 9 0 0 0 0 10 1966 137s VecScale 22 1.0 4.1710e-05 1.0 1.20e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 5744 137s VecCopy 124 1.0 2.4532e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 137s VecSet 141 1.0 7.3557e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 137s VecAXPY 40 1.0 2.1992e-04 1.1 7.86e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 7132 137s VecAYPX 258 1.0 1.0129e-03 1.0 2.11e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 4154 137s VecAXPBYCZ 80 1.0 4.8671e-04 1.0 2.19e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 8950 137s VecMAXPY 22 1.0 3.0060e-04 1.0 1.42e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 9419 137s VecAssemblyBegin 61 1.0 3.9225e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+01 0 0 0 0 13 0 0 0 0 14 0 137s VecAssemblyEnd 61 1.0 3.4588e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 137s VecPointwiseMult 182 1.0 7.0144e-04 1.0 9.95e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2826 137s VecReciprocal 8 1.0 9.8389e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 137s VecScatterBegin 343 1.0 1.5564e-03 1.1 0.00e+00 0.0 6.1e+02 5.1e+03 0.0e+00 0 0 76 43 0 0 0 76 43 0 0 137s VecScatterEnd 343 1.0 3.9046e-03 1.0 6.48e+03 1.1 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 3 137s VecNormalize 22 1.0 3.5308e-04 1.2 3.61e+05 1.0 0.0e+00 0.0e+00 2.2e+01 0 0 0 0 5 0 0 0 0 5 2036 137s SFSetGraph 26 1.0 7.3979e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 137s SFSetUp 26 1.0 3.7032e-04 1.0 0.00e+00 0.0 8.6e+01 5.7e+02 2.6e+01 0 0 11 1 6 0 0 11 1 6 0 137s SFBcastBegin 7 1.0 2.1934e-05 1.0 0.00e+00 0.0 1.4e+01 1.7e+03 0.0e+00 0 0 2 0 0 0 0 2 0 0 0 137s SFBcastEnd 7 1.0 1.5615e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 137s SFReduceBegin 3 1.0 2.8622e-05 1.0 0.00e+00 0.0 5.0e+00 7.5e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 137s SFReduceEnd 3 1.0 9.3640e-06 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 137s SFPack 353 1.0 9.3228e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 137s SFUnpack 353 1.0 5.6259e-05 1.1 6.48e+03 1.1 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 218 137s KSPSetUp 1 1.0 1.9168e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 137s KSPSolve 1 1.0 5.0914e-02 1.0 1.30e+08 1.0 4.8e+02 5.4e+03 8.0e+01 4 63 60 36 17 4 63 60 36 18 5102 137s KSPGMRESOrthog 20 1.0 1.2493e-03 1.0 2.41e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 5 3835 137s PCSetUp_GAMG+ 1 1.0 3.1444e-01 1.0 7.60e+07 1.1 3.0e+02 1.4e+04 3.1e+02 25 36 38 58 67 25 36 38 58 69 472 137s PCGAMGCreateG 2 1.0 1.0581e-02 1.0 1.50e+05 1.0 4.8e+01 1.9e+03 5.0e+01 1 0 6 1 11 1 0 6 1 11 28 137s GAMG Coarsen 4 1.0 1.9906e-02 1.0 0.00e+00 0.0 5.9e+01 9.7e+03 5.2e+01 2 0 7 8 11 2 0 7 8 12 0 137s GAMG MIS/Agg 2 1.0 1.8757e-02 1.0 0.00e+00 0.0 4.9e+01 1.1e+04 4.8e+01 1 0 6 7 10 1 0 6 7 11 0 137s PCGAMGProl 2 1.0 7.2615e-03 1.0 0.00e+00 0.0 8.7e+01 3.7e+03 7.6e+01 1 0 11 4 17 1 0 11 4 17 0 137s GAMG Prol-col 2 1.0 3.0558e-03 1.0 0.00e+00 0.0 7.5e+01 3.0e+03 5.6e+01 0 0 9 3 12 0 0 9 3 13 0 137s GAMG Prol-lift 2 1.0 4.0151e-03 1.0 0.00e+00 0.0 1.2e+01 8.1e+03 1.2e+01 0 0 2 1 3 0 0 2 1 3 0 137s PCGAMGOptProl 2 1.0 3.4045e-02 1.0 2.14e+07 1.0 6.4e+01 1.0e+04 6.6e+01 3 10 8 9 14 3 10 8 9 15 1238 137s GAMG smooth 2 1.0 2.6971e-02 1.0 7.24e+06 1.0 2.4e+01 1.6e+04 2.4e+01 2 3 3 5 5 2 3 3 5 5 527 137s PCGAMGCreateL 2 1.0 2.4186e-01 1.0 5.45e+07 1.1 4.2e+01 6.1e+04 6.0e+01 19 26 5 35 13 19 26 5 35 14 438 137s GAMG PtAP 2 1.0 2.3935e-01 1.0 5.45e+07 1.1 3.1e+01 8.2e+04 2.6e+01 19 26 4 35 6 19 26 4 35 6 442 137s GAMG Reduce 1 1.0 7.7795e-02 1.0 1.79e+07 1.3 2.2e+01 3.8e+04 4.7e+01 6 8 3 11 10 6 8 3 11 11 414 137s PCGAMG Squ l00 1 1.0 1.7951e-02 1.0 0.00e+00 0.0 1.4e+01 3.5e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 137s PCGAMG Gal l00 1 1.0 1.6426e-01 1.0 3.72e+07 1.0 2.0e+01 8.6e+04 1.3e+01 13 18 3 24 3 13 18 3 24 3 449 137s PCGAMG Opt l00 1 1.0 1.8806e-02 1.0 4.99e+06 1.0 1.2e+01 2.5e+04 1.1e+01 1 2 2 4 2 1 2 2 4 2 528 137s PCGAMG Gal l01 1 1.0 7.5294e-02 1.0 1.79e+07 1.3 1.1e+01 7.4e+04 1.3e+01 6 8 1 11 3 6 8 1 11 3 427 137s PCGAMG Opt l01 1 1.0 5.6004e-03 1.0 1.75e+06 1.2 1.2e+01 7.6e+03 1.1e+01 0 1 2 1 2 0 1 2 1 2 575 137s PCSetUp 1 1.0 3.1445e-01 1.0 7.60e+07 1.1 3.0e+02 1.4e+04 3.1e+02 25 36 38 58 67 25 36 38 58 69 472 137s PCSetUpOnBlocks 20 1.0 1.7097e-03 19.2 2.26e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1321 137s PCApply 20 1.0 4.4469e-02 1.0 1.12e+08 1.0 4.4e+02 5.0e+03 2.0e+01 4 54 55 31 4 4 54 55 31 5 5038 137s PCApplyOnBlocks 20 1.0 4.1924e-04 15.6 9.30e+05 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2218 137s ------------------------------------------------------------------------------------------------------------------------ 137s 137s Object Type Creations Destructions. Reports information only for process 0. 137s 137s --- Event Stage 0: Main Stage 137s 137s Container 11 11 137s Matrix 82 82 137s Matrix Coarsen 2 2 137s Matrix Null Space 1 1 137s Index Set 60 60 137s IS L to G Mapping 5 5 137s Vector 179 179 137s Star Forest Graph 34 34 137s Krylov Solver 7 7 137s Preconditioner 7 7 137s Viewer 2 2 137s PetscRandom 2 2 137s Distributed Mesh 4 4 137s Discrete System 4 4 137s Weak Form 4 4 137s ======================================================================================================================== 137s Average time to get PetscTime(): 5.91e-08 137s Average time for MPI_Barrier(): 3.353e-06 137s Average time for zero size MPI_Send(): 2.55035e-05 137s #PETSc Option Table entries: 137s --ndofs 20000 # (source: command line) 137s --problem_type elasticity # (source: command line) 137s --scaling_type strong # (source: command line) 137s -ksp_rtol 1.0e-8 # (source: command line) 137s -ksp_type cg # (source: command line) 137s -ksp_view # (source: command line) 137s -log_view # (source: command line) 137s -matptap_via scalable # (source: command line) 137s -mg_levels_esteig_ksp_type cg # (source: command line) 137s -mg_levels_ksp_type chebyshev # (source: command line) 137s -mg_levels_pc_type jacobi # (source: command line) 137s -options_left # (source: command line) 137s -pc_gamg_coarse_eq_limit 1000 # (source: command line) 137s -pc_type gamg # (source: command line) 137s #End of PETSc Option Table entries 137s Compiled without FORTRAN kernels 137s Compiled with full precision matrices (default) 137s sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 137s Configure options: --build=x86_64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --with-library-name-suffix=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi " --CXX_LINKER_FLAGS="-Wl,--no-as-needed -Wl,-z,defs" --CC_LINKER_FLAGS=-Wl,-z,defs --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real --PETSC_ARCH=x86_64-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" CXXFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" FCFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=3" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,--package-metadata=%7B%22type%22:%22deb%22%2C%22os%22:%22ubuntu%22%2C%22name%22:%22petsc%22%2C%22version%22:%223.24.3+dfsg1-1ubuntu1%22%2C%22architecture%22:%22amd64%22%7D -flto=auto -ffat-lto-objects -Wl,-z,relro -fPIC" MAKEFLAGS= 137s ----------------------------------------- 137s Libraries compiled on 2026-01-26 06:54:57 on reproducible 137s Machine characteristics: Linux-6.8.0-90-generic-x86_64-with-glibc2.42 137s Using PETSc directory: /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real 137s Using PETSc arch: 137s ----------------------------------------- 137s 137s Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -Wdate-time -D_FORTIFY_SOURCE=3 137s Using Fortran compiler: mpif90 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=3 137s ----------------------------------------- 137s 137s Using include paths: -I/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu-dist -I/usr/include/superlu -I/usr/include/scotch -I/usr/include/hdf5/openmpi 137s ----------------------------------------- 137s 137s Using C linker: mpicc 137s Using Fortran linker: mpif90 137s Using libraries: -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/gcc/x86_64-linux-gnu/15 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -lfftw3 -lfftw3_mpi -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu_dist -lsuperlu -llapack -lblas -lptesmumps -lptscotch -lscotch -lptscotcherr -lhdf5 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lm -lOpenCL -lyaml -lX11 -lstdc++ -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ 137s ----------------------------------------- 137s 137s #PETSc Option Table entries: 137s --ndofs 20000 # (source: command line) 137s --problem_type elasticity # (source: command line) 137s --scaling_type strong # (source: command line) 137s -ksp_rtol 1.0e-8 # (source: command line) 137s -ksp_type cg # (source: command line) 137s -ksp_view # (source: command line) 137s -log_view # (source: command line) 137s -matptap_via scalable # (source: command line) 137s -mg_levels_esteig_ksp_type cg # (source: command line) 137s -mg_levels_ksp_type chebyshev # (source: command line) 137s -mg_levels_pc_type jacobi # (source: command line) 137s -options_left # (source: command line) 137s -pc_gamg_coarse_eq_limit 1000 # (source: command line) 137s -pc_type gamg # (source: command line) 137s #End of PETSc Option Table entries 137s WARNING! There are options you set that were not used! 137s WARNING! could be spelling mistake, etc! 137s There are 4 unused database options. They are: 137s Option left: name:--ndofs value: 20000 source: command line 137s Option left: name:--problem_type value: elasticity source: command line 137s Option left: name:--scaling_type value: strong source: command line 137s Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line 138s ==== poisson weak scaling (2 processes with ndofs=10000) ==== 138s [2026-02-01 19:38:37.874] [RANK: 0] [info] Using partitioner with cell data (1 cell types) 138s [2026-02-01 19:38:37.875] [RANK: 0] [info] Compute partition of cells across ranks 138s [2026-02-01 19:38:37.875] [RANK: 0] [info] Building mesh dual graph 138s [2026-02-01 19:38:37.875] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 138s [2026-02-01 19:38:37.926] [RANK: 0] [info] Build nonlocal part of mesh dual graph 138s [2026-02-01 19:38:37.927] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 138s [2026-02-01 19:38:37.927] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 138s [2026-02-01 19:38:37.927] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 1, 1 138s [2026-02-01 19:38:37.930] [RANK: 0] [info] Graph edges (local: 208524, non-local: 1188) 138s [2026-02-01 19:38:37.930] [RANK: 0] [info] Compute graph partition using PT-SCOTCH 139s [2026-02-01 19:38:39.306] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 139s [2026-02-01 19:38:39.312] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 139s [2026-02-01 19:38:39.328] [RANK: 0] [info] Extract basic topology: 211368->211368 139s [2026-02-01 19:38:39.329] [RANK: 0] [info] Build local dual graphs, re-order cells, and compute process boundary vertices. 139s [2026-02-01 19:38:39.329] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 139s [2026-02-01 19:38:39.391] [RANK: 0] [info] GPS pseudo-diameter:(159) 3407-46668 139s [2026-02-01 19:38:39.396] [RANK: 0] [info] Create topology (generalised) 139s [2026-02-01 19:38:39.401] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 139s [2026-02-01 19:38:39.401] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 139s [2026-02-01 19:38:39.415] [RANK: 0] [info] Compute ghost indices 139s [2026-02-01 19:38:39.415] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 139s [2026-02-01 19:38:39.416] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 139s [2026-02-01 19:38:39.420] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 139s [2026-02-01 19:38:39.421] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 139s [2026-02-01 19:38:39.436] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 139s [2026-02-01 19:38:39.437] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 139s [2026-02-01 19:38:39.437] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 139s [2026-02-01 19:38:39.437] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 139s [2026-02-01 19:38:39.441] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 139s [2026-02-01 19:38:39.441] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 139s [2026-02-01 19:38:39.441] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 139s [2026-02-01 19:38:39.441] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 139s [2026-02-01 19:38:39.441] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 139s [2026-02-01 19:38:39.441] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 1, 0.5 139s [2026-02-01 19:38:39.442] [RANK: 0] [info] Create Geometry (multiple) 139s [2026-02-01 19:38:39.442] [RANK: 0] [info] Got 1 dof layouts 139s [2026-02-01 19:38:39.442] [RANK: 0] [info] Checking required entities per dimension 139s [2026-02-01 19:38:39.442] [RANK: 0] [info] Cell type: 0 dofmap: 52842x4 139s [2026-02-01 19:38:39.446] [RANK: 0] [info] Global index computation 139s [2026-02-01 19:38:39.446] [RANK: 0] [info] Got 1 index_maps 139s [2026-02-01 19:38:39.446] [RANK: 0] [info] Get global indices 139s [2026-02-01 19:38:39.447] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 139s [2026-02-01 19:38:39.447] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 139s [2026-02-01 19:38:39.447] [RANK: 0] [info] Calling compute_local_to_global 139s [2026-02-01 19:38:39.447] [RANK: 0] [info] xdofs.size = 211368 139s [2026-02-01 19:38:39.447] [RANK: 0] [info] dofmap sizes = 211368 139s [2026-02-01 19:38:39.447] [RANK: 0] [info] all_dofmaps.size = 211368 139s [2026-02-01 19:38:39.448] [RANK: 0] [info] nodes.size = 10188 139s [2026-02-01 19:38:39.450] [RANK: 0] [info] Creating geometry with 1 dofmaps 139s UnitCube (27x22x30) to be refined 0 times 139s [2026-02-01 19:38:39.450] [RANK: 0] [info] Computing mesh entities of dimension 2 139s [2026-02-01 19:38:39.484] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 139s [2026-02-01 19:38:39.485] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 139s [2026-02-01 19:38:39.514] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 139s [2026-02-01 19:38:39.514] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 139s [2026-02-01 19:38:39.516] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 139s [2026-02-01 19:38:39.516] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. 139s [2026-02-01 19:38:39.517] [RANK: 0] [info] Checking required entities per dimension 139s [2026-02-01 19:38:39.517] [RANK: 0] [info] Cell type: 0 dofmap: 52842x4 139s [2026-02-01 19:38:39.521] [RANK: 0] [info] Global index computation 139s [2026-02-01 19:38:39.521] [RANK: 0] [info] Got 1 index_maps 139s [2026-02-01 19:38:39.522] [RANK: 0] [info] Get global indices 139s [2026-02-01 19:38:39.522] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 139s [2026-02-01 19:38:39.522] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 139s [2026-02-01 19:38:39.523] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) 139s [2026-02-01 19:38:39.540] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 139s [2026-02-01 19:38:39.540] [RANK: 0] [info] Requesting connectivity (3, 0) - (2, 0) 139s [2026-02-01 19:38:39.556] [RANK: 0] [info] Column ghost size increased from 326 to 862 139s ---------------------------------------------------------------- 139s Test problem summary 139s dolfinx version: 0.10.0 139s dolfinx hash: ubuntu 139s ufl hash: 58f3dc30e5e56245b795ae796fe6a103649e8345 139s petsc version: PETSc Release Version 3.24.3, Jan 01, 2026 139s Problem type: poisson 139s Scaling type: weak 139s Num processes: 2 139s Num cells: 106920 (107 thousand) 139s Total degrees of freedom: 19964 (20 thousand) 139s Average degrees of freedom per process: 9982 139s ---------------------------------------------------------------- 139s [2026-02-01 19:38:39.599] [RANK: 0] [info] PETSc Krylov solver starting to solve system. 140s KSP Object: 2 MPI processes 140s type: cg 140s maximum iterations=10000, initial guess is zero 140s tolerances: relative=1e-08, absolute=1e-50, divergence=10000. 140s left preconditioning 140s using PRECONDITIONED norm type for convergence test 140s PC Object: 2 MPI processes 140s type: hypre 140s HYPRE BoomerAMG preconditioning 140s Cycle type V 140s Maximum number of levels 25 140s Maximum number of iterations PER hypre call 1 140s Convergence tolerance PER hypre call 0. 140s Threshold for strong coupling 0.5 140s Interpolation truncation factor 0. 140s Interpolation: max elements per row 0 140s Number of levels of aggressive coarsening 0 140s Number of paths for aggressive coarsening 1 140s Maximum row sums 0.9 140s Sweeps down 1 140s Sweeps up 1 140s Sweeps on coarse 1 140s Relax down symmetric-SOR/Jacobi 140s Relax up symmetric-SOR/Jacobi 140s Relax on coarse Gaussian-elimination 140s Relax weight (all) 1. 140s Outer relax weight (all) 1. 140s Maximum size of coarsest grid 9 140s Minimum size of coarsest grid 1 140s Using CF-relaxation 140s Not using more complex smoothers. 140s Measure type local 140s Coarsen type Falgout 140s Interpolation type classical 140s SpGEMM type hypre 140s linear system matrix = precond matrix: 140s Mat Object: 2 MPI processes 140s type: mpiaij 140s rows=19964, cols=19964 140s total: nonzeros=281986, allocated nonzeros=281986 140s total number of mallocs used during MatSetValues calls=0 140s not using I-node (on process 0) routines 140s 140s [MPI_MAX] Summary of timings (s) | reps avg tot 140s ------------------------------------------------------------------------------------------------------- 140s Build BoxMesh (tetrahedra) | 1 1.577892 1.577892 140s Build dofmap data | 2 0.005407 0.010814 140s Compute connectivity 2-0 | 1 0.000935 0.000935 140s Compute dof reordering map | 2 0.000421 0.000842 140s Compute entities of dim = 2 | 1 0.065850 0.065850 140s Compute graph partition (SCOTCH) | 1 1.370623 1.370623 140s Compute local part of mesh dual graph (mixed) | 2 0.057696 0.115392 140s Compute local-to-local map | 1 0.001422 0.001422 140s Compute non-local part of mesh dual graph | 1 0.003924 0.003924 140s Compute-local-to-global links for global/local adjacency list | 1 0.001132 0.001132 140s Distribute fixed-degree adjacency list to destination ranks | 1 0.027459 0.027459 140s Distribute row-wise data (scalable) | 1 0.001009 0.001009 140s GPS: create_level_structure | 2 0.000650 0.001950 140s Gibbs-Poole-Stockmeyer ordering | 1 0.005610 0.005610 140s Init MPI | 1 0.018282 0.018282 140s Init PETSc | 1 0.000659 0.000659 140s Init dofmap from element dofmap | 2 0.004134 0.008269 140s Init logging | 1 0.000005 0.000005 140s PETSc Krylov solver | 1 0.169426 0.169426 140s SparsityPattern::finalize | 1 0.010513 0.010513 140s Topology: create | 1 0.041365 0.041365 140s Topology: determine shared index ownership | 1 0.002203 0.002203 140s Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.003004 0.003004 140s ZZZ Assemble | 1 0.074416 0.074416 140s ZZZ Assemble matrix | 1 0.034299 0.034299 140s ZZZ Assemble vector | 1 0.006033 0.006033 140s ZZZ Create Mesh | 1 1.578091 1.578091 140s ZZZ Create RHS function | 1 0.016956 0.016956 140s ZZZ Create boundary conditions | 1 0.001211 0.001211 140s ZZZ Create facets and facet->cell connectivity | 1 0.066769 0.066769 140s ZZZ FunctionSpace | 1 0.005550 0.005550 140s ZZZ Solve | 1 0.171068 0.171068 140s *** Number of Krylov iterations: 6 140s *** Solution norm: 30.0262 140s **************************************************************************************************************************************************************** 140s *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** 140s **************************************************************************************************************************************************************** 140s 140s ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ 140s 140s /usr/bin/dolfinx-scaling-test on a named autopkgtest with 2 processes, by ubuntu on Sun Feb 1 19:38:39 2026 140s Using PETSc Release Version 3.24.3, Jan 01, 2026 140s 140s Max Max/Min Avg Total 140s Time (sec): 1.897e+00 1.000 1.897e+00 140s Objects: 0.000e+00 0.000 0.000e+00 140s Flops: 3.131e+06 1.024 3.094e+06 6.188e+06 140s Flops/sec: 1.651e+06 1.024 1.631e+06 3.262e+06 140s MPI Msg Count: 1.400e+01 1.000 1.400e+01 2.800e+01 140s MPI Msg Len (bytes): 1.018e+05 1.000 7.273e+03 2.037e+05 140s MPI Reductions: 6.900e+01 1.000 140s 140s Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) 140s e.g., VecAXPY() for real vectors of length N --> 2N flops 140s and VecAXPY() for complex vectors of length N --> 8N flops 140s 140s Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- 140s Avg %Total Avg %Total Count %Total Avg %Total Count %Total 140s 0: Main Stage: 1.8969e+00 100.0% 6.1883e+06 100.0% 2.800e+01 100.0% 7.273e+03 100.0% 5.100e+01 73.9% 140s 140s ------------------------------------------------------------------------------------------------------------------------ 140s See the 'Profiling' chapter of the users' manual for details on interpreting output. 140s Phase summary info: 140s Count: number of times phase was executed 140s Time and Flop: Max - maximum over all processes 140s Ratio - ratio of maximum to minimum over all processes 140s Mess: number of messages sent 140s AvgLen: average message length (bytes) 140s Reduct: number of global reductions 140s Global: entire computation 140s Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). 140s %T - percent time in this phase %F - percent flop in this phase 140s %M - percent messages in this phase %L - percent message lengths in this phase 140s %R - percent reductions in this phase 140s Total Mflop/s: 1e-6 * (sum of flop over all processes)/(max time over all processes) 140s ------------------------------------------------------------------------------------------------------------------------ 140s Event Count Time (sec) Flop --- Global --- --- Stage ---- Total 140s Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s 140s ------------------------------------------------------------------------------------------------------------------------ 140s 140s --- Event Stage 0: Main Stage 140s 140s BuildTwoSided 5 1.0 4.5731e-04 11.6 0.00e+00 0.0 8.0e+00 4.0e+00 5.0e+00 0 0 29 0 7 0 0 29 0 10 0 140s BuildTwoSidedF 2 1.0 4.5617e-04 12.3 0.00e+00 0.0 4.0e+00 2.7e+04 2.0e+00 0 0 14 53 3 0 0 14 53 4 0 140s MatMult 6 1.0 1.1667e-03 1.0 1.65e+06 1.0 1.2e+01 6.9e+03 0.0e+00 0 53 43 41 0 0 53 43 41 0 2798 140s MatConvert 1 1.0 3.7138e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 140s MatAssemblyBegin 5 1.0 1.8132e-03 1.6 0.00e+00 0.0 4.0e+00 2.7e+04 2.0e+00 0 0 14 53 3 0 0 14 53 4 0 140s MatAssemblyEnd 5 1.0 2.5547e-03 1.1 2.17e+03 1.0 4.0e+00 1.7e+03 5.0e+00 0 0 14 3 7 0 0 14 3 10 2 140s MatGetRowIJ 4 1.0 1.1210e-06 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 140s MatView 1 1.0 1.6935e-03 3.4 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 140s MatSetPreallCOO 2 1.0 1.8020e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 140s MatSetValuesCOO 2 1.0 5.8763e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 140s VecTDot 14 1.0 2.8767e-04 1.0 2.83e+05 1.0 0.0e+00 0.0e+00 1.4e+01 0 9 0 0 20 0 9 0 0 27 1943 140s VecNorm 7 1.0 2.2079e-04 1.6 1.41e+05 1.0 0.0e+00 0.0e+00 7.0e+00 0 5 0 0 10 0 5 0 0 14 1266 140s VecCopy 2 1.0 1.5013e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 140s VecSet 8 1.0 1.8920e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 140s VecAXPY 12 1.0 5.0915e-05 1.0 2.42e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 9411 140s VecAYPX 5 1.0 3.7087e-05 1.0 1.01e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 5383 140s VecScatterBegin 6 1.0 7.0026e-05 1.0 0.00e+00 0.0 1.2e+01 6.9e+03 0.0e+00 0 0 43 41 0 0 0 43 41 0 0 140s VecScatterEnd 6 1.0 8.1832e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 140s SFSetGraph 3 1.0 1.8989e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 140s SFSetUp 3 1.0 8.2485e-05 1.2 0.00e+00 0.0 1.2e+01 1.0e+03 3.0e+00 0 0 43 6 4 0 0 43 6 6 0 140s SFPack 6 1.0 3.4261e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 140s SFUnpack 6 1.0 1.0010e-06 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 140s KSPSetUp 1 1.0 1.9049e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 140s KSPSolve 1 1.0 5.0247e-02 1.0 2.42e+06 1.0 1.2e+01 6.9e+03 2.1e+01 3 77 43 41 30 3 77 43 41 41 95 140s PCSetUp 1 1.0 1.1709e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 6 0 0 0 3 6 0 0 0 4 0 140s PCApply 7 1.0 4.8505e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 3 0 0 0 0 3 0 0 0 0 0 140s ------------------------------------------------------------------------------------------------------------------------ 140s 140s Object Type Creations Destructions. Reports information only for process 0. 140s 140s --- Event Stage 0: Main Stage 140s 140s Container 2 2 140s Matrix 7 7 140s Index Set 6 6 140s IS L to G Mapping 1 1 140s Vector 12 12 140s Star Forest Graph 3 3 140s Krylov Solver 1 1 140s Preconditioner 1 1 140s Viewer 1 1 140s ======================================================================================================================== 140s Average time to get PetscTime(): 5.81e-08 140s Average time for MPI_Barrier(): 1.26952e-05 140s Average time for zero size MPI_Send(): 1.1793e-05 140s #PETSc Option Table entries: 140s --ndofs 10000 # (source: command line) 140s --problem_type poisson # (source: command line) 140s --scaling_type weak # (source: command line) 140s -ksp_rtol 1.0e-8 # (source: command line) 140s -ksp_type cg # (source: command line) 140s -ksp_view # (source: command line) 140s -log_view # (source: command line) 140s -options_left # (source: command line) 140s -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) 140s -pc_hypre_type boomeramg # (source: command line) 140s -pc_type hypre # (source: command line) 140s #End of PETSc Option Table entries 140s Compiled without FORTRAN kernels 140s Compiled with full precision matrices (default) 140s sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 140s Configure options: --build=x86_64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --with-library-name-suffix=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi " --CXX_LINKER_FLAGS="-Wl,--no-as-needed -Wl,-z,defs" --CC_LINKER_FLAGS=-Wl,-z,defs --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real --PETSC_ARCH=x86_64-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" CXXFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" FCFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=3" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,--package-metadata=%7B%22type%22:%22deb%22%2C%22os%22:%22ubuntu%22%2C%22name%22:%22petsc%22%2C%22version%22:%223.24.3+dfsg1-1ubuntu1%22%2C%22architecture%22:%22amd64%22%7D -flto=auto -ffat-lto-objects -Wl,-z,relro -fPIC" MAKEFLAGS= 140s ----------------------------------------- 140s Libraries compiled on 2026-01-26 06:54:57 on reproducible 140s Machine characteristics: Linux-6.8.0-90-generic-x86_64-with-glibc2.42 140s Using PETSc directory: /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real 140s Using PETSc arch: 140s ----------------------------------------- 140s 140s Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -Wdate-time -D_FORTIFY_SOURCE=3 140s Using Fortran compiler: mpif90 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=3 140s ----------------------------------------- 140s 140s Using include paths: -I/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu-dist -I/usr/include/superlu -I/usr/include/scotch -I/usr/include/hdf5/openmpi 140s ----------------------------------------- 140s 140s Using C linker: mpicc 140s Using Fortran linker: mpif90 140s Using libraries: -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/gcc/x86_64-linux-gnu/15 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -lfftw3 -lfftw3_mpi -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu_dist -lsuperlu -llapack -lblas -lptesmumps -lptscotch -lscotch -lptscotcherr -lhdf5 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lm -lOpenCL -lyaml -lX11 -lstdc++ -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ 140s ----------------------------------------- 140s 140s #PETSc Option Table entries: 140s --ndofs 10000 # (source: command line) 140s --problem_type poisson # (source: command line) 140s --scaling_type weak # (source: command line) 140s -ksp_rtol 1.0e-8 # (source: command line) 140s -ksp_type cg # (source: command line) 140s -ksp_view # (source: command line) 140s -log_view # (source: command line) 140s -options_left # (source: command line) 140s -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) 140s -pc_hypre_type boomeramg # (source: command line) 140s -pc_type hypre # (source: command line) 140s #End of PETSc Option Table entries 140s WARNING! There are options you set that were not used! 140s WARNING! could be spelling mistake, etc! 140s There are 3 unused database options. They are: 140s Option left: name:--ndofs value: 10000 source: command line 140s Option left: name:--problem_type value: poisson source: command line 140s Option left: name:--scaling_type value: weak source: command line 140s ==== poisson strong scaling (2 processes with ndofs=20000) ==== 140s [2026-02-01 19:38:40.041] [RANK: 0] [info] Using partitioner with cell data (1 cell types) 140s [2026-02-01 19:38:40.041] [RANK: 0] [info] Compute partition of cells across ranks 140s [2026-02-01 19:38:40.041] [RANK: 0] [info] Building mesh dual graph 140s [2026-02-01 19:38:40.042] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 140s [2026-02-01 19:38:40.093] [RANK: 0] [info] Build nonlocal part of mesh dual graph 140s [2026-02-01 19:38:40.093] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 140s [2026-02-01 19:38:40.093] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 140s [2026-02-01 19:38:40.093] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 1, 1 140s [2026-02-01 19:38:40.096] [RANK: 0] [info] Graph edges (local: 208524, non-local: 1188) 140s [2026-02-01 19:38:40.096] [RANK: 0] [info] Compute graph partition using PT-SCOTCH 141s [2026-02-01 19:38:41.484] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 141s [2026-02-01 19:38:41.487] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 141s [2026-02-01 19:38:41.508] [RANK: 0] [info] Extract basic topology: 213424->213424 141s [2026-02-01 19:38:41.509] [RANK: 0] [info] Build local dual graphs, re-order cells, and compute process boundary vertices. 141s [2026-02-01 19:38:41.509] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 141s [2026-02-01 19:38:41.564] [RANK: 0] [info] GPS pseudo-diameter:(160) 4558-49949 141s [2026-02-01 19:38:41.569] [RANK: 0] [info] Create topology (generalised) 141s [2026-02-01 19:38:41.574] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 141s [2026-02-01 19:38:41.574] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 141s [2026-02-01 19:38:41.588] [RANK: 0] [info] Compute ghost indices 141s [2026-02-01 19:38:41.588] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 141s [2026-02-01 19:38:41.588] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 141s [2026-02-01 19:38:41.593] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 141s [2026-02-01 19:38:41.593] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 141s [2026-02-01 19:38:41.609] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 141s [2026-02-01 19:38:41.609] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 141s [2026-02-01 19:38:41.609] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 141s [2026-02-01 19:38:41.609] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 141s [2026-02-01 19:38:41.613] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 141s [2026-02-01 19:38:41.613] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 141s [2026-02-01 19:38:41.613] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 141s [2026-02-01 19:38:41.614] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 141s [2026-02-01 19:38:41.614] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 141s [2026-02-01 19:38:41.614] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 1, 0.5 141s [2026-02-01 19:38:41.614] [RANK: 0] [info] Create Geometry (multiple) 141s [2026-02-01 19:38:41.614] [RANK: 0] [info] Got 1 dof layouts 141s [2026-02-01 19:38:41.614] [RANK: 0] [info] Checking required entities per dimension 141s [2026-02-01 19:38:41.614] [RANK: 0] [info] Cell type: 0 dofmap: 53356x4 141s [2026-02-01 19:38:41.618] [RANK: 0] [info] Global index computation 141s [2026-02-01 19:38:41.619] [RANK: 0] [info] Got 1 index_maps 141s [2026-02-01 19:38:41.619] [RANK: 0] [info] Get global indices 141s [2026-02-01 19:38:41.619] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 141s [2026-02-01 19:38:41.619] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 141s [2026-02-01 19:38:41.620] [RANK: 0] [info] Calling compute_local_to_global 141s [2026-02-01 19:38:41.620] [RANK: 0] [info] xdofs.size = 213424 141s [2026-02-01 19:38:41.620] [RANK: 0] [info] dofmap sizes = 213424 141s [2026-02-01 19:38:41.620] [RANK: 0] [info] all_dofmaps.size = 213424 141s [2026-02-01 19:38:41.620] [RANK: 0] [info] nodes.size = 10299 141s [2026-02-01 19:38:41.623] [RANK: 0] [info] Creating geometry with 1 dofmaps 141s UnitCube (27x22x30) to be refined 0 times 141s [2026-02-01 19:38:41.623] [RANK: 0] [info] Computing mesh entities of dimension 2 142s [2026-02-01 19:38:41.657] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 142s [2026-02-01 19:38:41.657] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 142s [2026-02-01 19:38:41.687] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 142s [2026-02-01 19:38:41.687] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 142s [2026-02-01 19:38:41.689] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 142s [2026-02-01 19:38:41.689] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. 142s [2026-02-01 19:38:41.690] [RANK: 0] [info] Checking required entities per dimension 142s [2026-02-01 19:38:41.690] [RANK: 0] [info] Cell type: 0 dofmap: 53356x4 142s [2026-02-01 19:38:41.694] [RANK: 0] [info] Global index computation 142s [2026-02-01 19:38:41.694] [RANK: 0] [info] Got 1 index_maps 142s [2026-02-01 19:38:41.694] [RANK: 0] [info] Get global indices 142s [2026-02-01 19:38:41.695] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 142s [2026-02-01 19:38:41.695] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 142s [2026-02-01 19:38:41.696] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) 142s [2026-02-01 19:38:41.713] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 142s [2026-02-01 19:38:41.713] [RANK: 0] [info] Requesting connectivity (3, 0) - (2, 0) 142s [2026-02-01 19:38:41.728] [RANK: 0] [info] Column ghost size increased from 328 to 870 142s ---------------------------------------------------------------- 142s Test problem summary 142s dolfinx version: 0.10.0 142s dolfinx hash: ubuntu 142s ufl hash: 58f3dc30e5e56245b795ae796fe6a103649e8345 142s petsc version: PETSc Release Version 3.24.3, Jan 01, 2026 142s Problem type: poisson 142s Scaling type: strong 142s Num processes: 2 142s Num cells: 106920 (107 thousand) 142s Total degrees of freedom: 19964 (20 thousand) 142s Average degrees of freedom per process: 9982 142s ---------------------------------------------------------------- 142s [2026-02-01 19:38:41.770] [RANK: 0] [info] PETSc Krylov solver starting to solve system. 142s KSP Object: 2 MPI processes 142s type: cg 142s maximum iterations=10000, initial guess is zero 142s tolerances: relative=1e-08, absolute=1e-50, divergence=10000. 142s left preconditioning 142s using PRECONDITIONED norm type for convergence test 142s PC Object: 2 MPI processes 142s type: hypre 142s HYPRE BoomerAMG preconditioning 142s Cycle type V 142s Maximum number of levels 25 142s Maximum number of iterations PER hypre call 1 142s Convergence tolerance PER hypre call 0. 142s Threshold for strong coupling 0.5 142s Interpolation truncation factor 0. 142s Interpolation: max elements per row 0 142s Number of levels of aggressive coarsening 0 142s Number of paths for aggressive coarsening 1 142s Maximum row sums 0.9 142s Sweeps down 1 142s Sweeps up 1 142s Sweeps on coarse 1 142s Relax down symmetric-SOR/Jacobi 142s Relax up symmetric-SOR/Jacobi 142s Relax on coarse Gaussian-elimination 142s Relax weight (all) 1. 142s Outer relax weight (all) 1. 142s Maximum size of coarsest grid 9 142s Minimum size of coarsest grid 1 142s Using CF-relaxation 142s Not using more complex smoothers. 142s Measure type local 142s Coarsen type Falgout 142s Interpolation type classical 142s SpGEMM type hypre 142s linear system matrix = precond matrix: 142s Mat Object: 2 MPI processes 142s type: mpiaij 142s rows=19964, cols=19964 142s total: nonzeros=281986, allocated nonzeros=281986 142s total number of mallocs used during MatSetValues calls=0 142s not using I-node (on process 0) routines 142s 142s [MPI_MAX] Summary of timings (s) | reps avg tot 142s ------------------------------------------------------------------------------------------------------- 142s Build BoxMesh (tetrahedra) | 1 1.583649 1.583649 142s Build dofmap data | 2 0.005384 0.010768 142s Compute connectivity 2-0 | 1 0.001005 0.001005 142s Compute dof reordering map | 2 0.000375 0.000751 142s Compute entities of dim = 2 | 1 0.065950 0.065950 142s Compute graph partition (SCOTCH) | 1 1.378027 1.378027 142s Compute local part of mesh dual graph (mixed) | 2 0.053740 0.107481 142s Compute local-to-local map | 1 0.001378 0.001378 142s Compute non-local part of mesh dual graph | 1 0.003441 0.003441 142s Compute-local-to-global links for global/local adjacency list | 1 0.001113 0.001113 142s Distribute fixed-degree adjacency list to destination ranks | 1 0.034395 0.034395 142s Distribute row-wise data (scalable) | 1 0.001346 0.001346 142s GPS: create_level_structure | 3 0.000644 0.001932 142s Gibbs-Poole-Stockmeyer ordering | 1 0.005611 0.005611 142s Init MPI | 1 0.017888 0.017888 142s Init PETSc | 1 0.000655 0.000655 142s Init dofmap from element dofmap | 2 0.004140 0.008281 142s Init logging | 1 0.000005 0.000005 142s PETSc Krylov solver | 1 0.166281 0.166281 142s SparsityPattern::finalize | 1 0.010601 0.010601 142s Topology: create | 1 0.040353 0.040353 142s Topology: determine shared index ownership | 1 0.001816 0.001816 142s Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.003474 0.003474 142s ZZZ Assemble | 1 0.073257 0.073257 142s ZZZ Assemble matrix | 1 0.033456 0.033456 142s ZZZ Assemble vector | 1 0.005625 0.005625 142s ZZZ Create Mesh | 1 1.583750 1.583750 142s ZZZ Create RHS function | 1 0.016867 0.016867 142s ZZZ Create boundary conditions | 1 0.001375 0.001375 142s ZZZ Create facets and facet->cell connectivity | 1 0.066873 0.066873 142s ZZZ FunctionSpace | 1 0.005505 0.005505 142s ZZZ Solve | 1 0.168024 0.168024 142s *** Number of Krylov iterations: 6 142s *** Solution norm: 30.0262 142s **************************************************************************************************************************************************************** 142s *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** 142s **************************************************************************************************************************************************************** 142s 142s ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ 142s 142s /usr/bin/dolfinx-scaling-test on a named autopkgtest with 2 processes, by ubuntu on Sun Feb 1 19:38:41 2026 142s Using PETSc Release Version 3.24.3, Jan 01, 2026 142s 142s Max Max/Min Avg Total 142s Time (sec): 1.899e+00 1.000 1.899e+00 142s Objects: 0.000e+00 0.000 0.000e+00 142s Flops: 3.100e+06 1.004 3.094e+06 6.188e+06 142s Flops/sec: 1.632e+06 1.004 1.629e+06 3.258e+06 142s MPI Msg Count: 1.400e+01 1.000 1.400e+01 2.800e+01 142s MPI Msg Len (bytes): 1.028e+05 1.000 7.343e+03 2.056e+05 142s MPI Reductions: 6.900e+01 1.000 142s 142s Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) 142s e.g., VecAXPY() for real vectors of length N --> 2N flops 142s and VecAXPY() for complex vectors of length N --> 8N flops 142s 142s Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- 142s Avg %Total Avg %Total Count %Total Avg %Total Count %Total 142s 0: Main Stage: 1.8990e+00 100.0% 6.1877e+06 100.0% 2.800e+01 100.0% 7.343e+03 100.0% 5.100e+01 73.9% 142s 142s ------------------------------------------------------------------------------------------------------------------------ 142s See the 'Profiling' chapter of the users' manual for details on interpreting output. 142s Phase summary info: 142s Count: number of times phase was executed 142s Time and Flop: Max - maximum over all processes 142s Ratio - ratio of maximum to minimum over all processes 142s Mess: number of messages sent 142s AvgLen: average message length (bytes) 142s Reduct: number of global reductions 142s Global: entire computation 142s Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). 142s %T - percent time in this phase %F - percent flop in this phase 142s %M - percent messages in this phase %L - percent message lengths in this phase 142s %R - percent reductions in this phase 142s Total Mflop/s: 1e-6 * (sum of flop over all processes)/(max time over all processes) 142s ------------------------------------------------------------------------------------------------------------------------ 142s Event Count Time (sec) Flop --- Global --- --- Stage ---- Total 142s Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s 142s ------------------------------------------------------------------------------------------------------------------------ 142s 142s --- Event Stage 0: Main Stage 142s 142s BuildTwoSided 5 1.0 6.7701e-05 1.1 0.00e+00 0.0 8.0e+00 4.0e+00 5.0e+00 0 0 29 0 7 0 0 29 0 10 0 142s BuildTwoSidedF 2 1.0 6.6661e-05 1.2 0.00e+00 0.0 4.0e+00 2.7e+04 2.0e+00 0 0 14 53 3 0 0 14 53 4 0 142s MatMult 6 1.0 1.1340e-03 1.0 1.64e+06 1.0 1.2e+01 7.0e+03 0.0e+00 0 53 43 41 0 0 53 43 41 0 2878 142s MatConvert 1 1.0 3.8328e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 142s MatAssemblyBegin 5 1.0 1.3172e-03 1.1 0.00e+00 0.0 4.0e+00 2.7e+04 2.0e+00 0 0 14 53 3 0 0 14 53 4 0 142s MatAssemblyEnd 5 1.0 2.7009e-03 1.1 2.20e+03 1.0 4.0e+00 1.7e+03 5.0e+00 0 0 14 3 7 0 0 14 3 10 2 142s MatGetRowIJ 4 1.0 1.2430e-06 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 142s MatView 1 1.0 1.8411e-03 3.8 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 142s MatSetPreallCOO 2 1.0 1.8087e-03 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 142s MatSetValuesCOO 2 1.0 5.8487e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 142s VecTDot 14 1.0 2.3969e-04 1.0 2.80e+05 1.0 0.0e+00 0.0e+00 1.4e+01 0 9 0 0 20 0 9 0 0 27 2332 142s VecNorm 7 1.0 2.8680e-04 2.1 1.40e+05 1.0 0.0e+00 0.0e+00 7.0e+00 0 5 0 0 10 0 5 0 0 14 974 142s VecCopy 2 1.0 1.7195e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 142s VecSet 8 1.0 1.8970e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 142s VecAXPY 12 1.0 6.3407e-05 1.0 2.40e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 7557 142s VecAYPX 5 1.0 3.7246e-05 1.0 9.99e+04 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 5360 142s VecScatterBegin 6 1.0 6.6974e-05 1.0 0.00e+00 0.0 1.2e+01 7.0e+03 0.0e+00 0 0 43 41 0 0 0 43 41 0 0 142s VecScatterEnd 6 1.0 7.8007e-05 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 142s SFSetGraph 3 1.0 1.9218e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 142s SFSetUp 3 1.0 7.0596e-05 1.0 0.00e+00 0.0 1.2e+01 1.0e+03 3.0e+00 0 0 43 6 4 0 0 43 6 6 0 142s SFPack 6 1.0 3.2119e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 142s SFUnpack 6 1.0 8.3100e-07 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 142s KSPSetUp 1 1.0 2.0501e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 142s KSPSolve 1 1.0 4.8510e-02 1.0 2.39e+06 1.0 1.2e+01 7.0e+03 2.1e+01 3 77 43 41 30 3 77 43 41 41 99 142s PCSetUp 1 1.0 1.1552e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 6 0 0 0 3 6 0 0 0 4 0 142s PCApply 7 1.0 4.6838e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 2 0 0 0 0 2 0 0 0 0 0 142s ------------------------------------------------------------------------------------------------------------------------ 142s 142s Object Type Creations Destructions. Reports information only for process 0. 142s 142s --- Event Stage 0: Main Stage 142s 142s Container 2 2 142s Matrix 7 7 142s Index Set 6 6 142s IS L to G Mapping 1 1 142s Vector 12 12 142s Star Forest Graph 3 3 142s Krylov Solver 1 1 142s Preconditioner 1 1 142s Viewer 1 1 142s ======================================================================================================================== 142s Average time to get PetscTime(): 5.81e-08 142s Average time for MPI_Barrier(): 7.43e-07 142s Average time for zero size MPI_Send(): 3.7855e-06 142s #PETSc Option Table entries: 142s --ndofs 20000 # (source: command line) 142s --problem_type poisson # (source: command line) 142s --scaling_type strong # (source: command line) 142s -ksp_rtol 1.0e-8 # (source: command line) 142s -ksp_type cg # (source: command line) 142s -ksp_view # (source: command line) 142s -log_view # (source: command line) 142s -options_left # (source: command line) 142s -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) 142s -pc_hypre_type boomeramg # (source: command line) 142s -pc_type hypre # (source: command line) 142s #End of PETSc Option Table entries 142s Compiled without FORTRAN kernels 142s Compiled with full precision matrices (default) 142s sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 142s Configure options: --build=x86_64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --with-library-name-suffix=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi " --CXX_LINKER_FLAGS="-Wl,--no-as-needed -Wl,-z,defs" --CC_LINKER_FLAGS=-Wl,-z,defs --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real --PETSC_ARCH=x86_64-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" CXXFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" FCFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=3" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,--package-metadata=%7B%22type%22:%22deb%22%2C%22os%22:%22ubuntu%22%2C%22name%22:%22petsc%22%2C%22version%22:%223.24.3+dfsg1-1ubuntu1%22%2C%22architecture%22:%22amd64%22%7D -flto=auto -ffat-lto-objects -Wl,-z,relro -fPIC" MAKEFLAGS= 142s ----------------------------------------- 142s Libraries compiled on 2026-01-26 06:54:57 on reproducible 142s Machine characteristics: Linux-6.8.0-90-generic-x86_64-with-glibc2.42 142s Using PETSc directory: /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real 142s Using PETSc arch: 142s ----------------------------------------- 142s 142s Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -Wdate-time -D_FORTIFY_SOURCE=3 142s Using Fortran compiler: mpif90 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=3 142s ----------------------------------------- 142s 142s Using include paths: -I/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu-dist -I/usr/include/superlu -I/usr/include/scotch -I/usr/include/hdf5/openmpi 142s ----------------------------------------- 142s 142s Using C linker: mpicc 142s Using Fortran linker: mpif90 142s Using libraries: -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/gcc/x86_64-linux-gnu/15 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -lfftw3 -lfftw3_mpi -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu_dist -lsuperlu -llapack -lblas -lptesmumps -lptscotch -lscotch -lptscotcherr -lhdf5 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lm -lOpenCL -lyaml -lX11 -lstdc++ -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ 142s ----------------------------------------- 142s 142s #PETSc Option Table entries: 142s --ndofs 20000 # (source: command line) 142s --problem_type poisson # (source: command line) 142s --scaling_type strong # (source: command line) 142s -ksp_rtol 1.0e-8 # (source: command line) 142s -ksp_type cg # (source: command line) 142s -ksp_view # (source: command line) 142s -log_view # (source: command line) 142s -options_left # (source: command line) 142s -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) 142s -pc_hypre_type boomeramg # (source: command line) 142s -pc_type hypre # (source: command line) 142s #End of PETSc Option Table entries 142s WARNING! There are options you set that were not used! 142s WARNING! could be spelling mistake, etc! 142s There are 3 unused database options. They are: 142s Option left: name:--ndofs value: 20000 source: command line 142s Option left: name:--problem_type value: poisson source: command line 142s Option left: name:--scaling_type value: strong source: command line 142s autopkgtest [19:38:42]: test dolfinx-performance-test-binary: -----------------------] 143s dolfinx-performance-test-binary PASS 143s autopkgtest [19:38:43]: test dolfinx-performance-test-binary: - - - - - - - - - - results - - - - - - - - - - 143s autopkgtest [19:38:43]: test dolfinx-performance-test-source: preparing testbed 143s Reading package lists... 143s Building dependency tree... 143s Reading state information... 143s Solving dependencies... 144s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 145s autopkgtest [19:38:45]: test dolfinx-performance-test-source: [----------------------- 145s -- The C compiler identification is GNU 15.2.0 145s -- The CXX compiler identification is GNU 15.2.0 145s -- Detecting C compiler ABI info 145s -- Detecting C compiler ABI info - done 145s -- Check for working C compiler: /usr/bin/cc - skipped 145s -- Detecting C compile features 145s -- Detecting C compile features - done 145s -- Detecting CXX compiler ABI info 145s -- Detecting CXX compiler ABI info - done 145s -- Check for working CXX compiler: /usr/bin/c++ - skipped 145s -- Detecting CXX compile features 145s -- Detecting CXX compile features - done 145s -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") 146s -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") 146s -- Found MPI: TRUE (found version "3.1") 146s -- Performing Test CMAKE_HAVE_LIBC_PTHREAD 146s -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success 146s -- Found Threads: TRUE 146s -- Found Boost 1.88.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.88.0 146s -- Requested configuration: REQUIRED 146s -- Found boost_headers 1.88.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.88.0 146s -- Checking for Basix hints with /usr/bin/python3 146s -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints 147s -- HDF5: Using hdf5 compiler wrapper to determine C configuration 147s -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.14.6") found components: C 147s -- HDF5_DIR: HDF5_DIR-NOTFOUND 147s -- HDF5_DEFINITIONS: 147s -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi 147s -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so 147s -- HDF5_HL_LIBRARIES: 147s -- HDF5_C_DEFINITIONS: 147s -- HDF5_C_INCLUDE_DIR: 147s -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi 147s -- HDF5_C_LIBRARY: 147s -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so 147s -- HDF5_C_HL_LIBRARY: 147s -- HDF5_C_HL_LIBRARIES: 147s -- Defined targets (if any): 147s -- ... hdf5::hdf5 147s -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") 147s -- Checking for one of the modules 'PETSc;petsc' 147s -- Looking for PETSC_USE_COMPLEX 147s -- Looking for PETSC_USE_COMPLEX - not found 147s -- Checking for one of the modules 'SLEPc;slepc' 147s -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.2", minimum required is "2.8.1") found components: CXX 147s CMake Warning (dev) at CMakeLists.txt:52 (find_package): 147s Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake 147s --help-policy CMP0167" for policy details. Use the cmake_policy command to 147s set the policy and suppress this warning. 147s 147s This warning is for project developers. Use -Wno-dev to suppress it. 147s 147s -- Found Boost 1.88.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.88.0 147s -- Requested configuration: QUIET REQUIRED COMPONENTS program_options 147s -- Found boost_program_options 1.88.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_program_options-1.88.0 147s -- [x] libboost_program_options.so.1.88.0 147s -- [ ] libboost_program_options.a 147s -- Adding boost_program_options dependencies: headers 147s -- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.88.0/BoostConfig.cmake (found suitable version "1.88.0", minimum required is "1.70") found components: program_options 147s -- -Ofast -g -Wall 147s -- Configuring done (2.0s) 147s -- Generating done (0.0s) 147s -- Build files have been written to: /tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build 147s /usr/bin/cmake -S/tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build -B/tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build --check-build-system CMakeFiles/Makefile.cmake 0 147s /usr/bin/cmake -E cmake_progress_start /tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build/CMakeFiles /tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build//CMakeFiles/progress.marks 147s make -f CMakeFiles/Makefile2 all 147s make[1]: Entering directory '/tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build' 147s make -f CMakeFiles/dolfinx-scaling-test.dir/build.make CMakeFiles/dolfinx-scaling-test.dir/depend 147s make[2]: Entering directory '/tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build' 147s [ 9%] Generating Poisson.c 147s ffcx /tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build/Poisson.py 147s [ 18%] Generating Elasticity.c 147s ffcx /tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build/Elasticity.py 148s cd /tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build /tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build /tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build /tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build /tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build/CMakeFiles/dolfinx-scaling-test.dir/DependInfo.cmake "--color=" 148s make[2]: Leaving directory '/tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build' 148s make -f CMakeFiles/dolfinx-scaling-test.dir/build.make CMakeFiles/dolfinx-scaling-test.dir/build 148s make[2]: Entering directory '/tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build' 148s [ 27%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o 148s /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DDOLFINX_VERSION=\"0.10.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DMDSPAN_USE_BRACKET_OPERATOR=0 -DMDSPAN_USE_PAREN_OPERATOR=1 -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real/include -Ofast -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=3 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -c /tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build/main.cpp 159s [ 36%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o 159s /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DDOLFINX_VERSION=\"0.10.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DMDSPAN_USE_BRACKET_OPERATOR=0 -DMDSPAN_USE_PAREN_OPERATOR=1 -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real/include -Ofast -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=3 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o -c /tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build/mesh.cpp 177s [ 45%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o 177s /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DDOLFINX_VERSION=\"0.10.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DMDSPAN_USE_BRACKET_OPERATOR=0 -DMDSPAN_USE_PAREN_OPERATOR=1 -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real/include -Ofast -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=3 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o -c /tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build/elasticity_problem.cpp 214s [ 54%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o 214s /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DDOLFINX_VERSION=\"0.10.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DMDSPAN_USE_BRACKET_OPERATOR=0 -DMDSPAN_USE_PAREN_OPERATOR=1 -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real/include -Ofast -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=3 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o -c /tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build/cgpoisson_problem.cpp 243s [ 63%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o 243s /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DDOLFINX_VERSION=\"0.10.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DMDSPAN_USE_BRACKET_OPERATOR=0 -DMDSPAN_USE_PAREN_OPERATOR=1 -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real/include -Ofast -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=3 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o -c /tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build/poisson_problem.cpp 279s [ 72%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o 279s /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DDOLFINX_VERSION=\"0.10.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DMDSPAN_USE_BRACKET_OPERATOR=0 -DMDSPAN_USE_PAREN_OPERATOR=1 -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real/include -Ofast -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=3 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o -c /tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build/mem.cpp 281s [ 81%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o 281s /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DDOLFINX_VERSION=\"0.10.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DMDSPAN_USE_BRACKET_OPERATOR=0 -DMDSPAN_USE_PAREN_OPERATOR=1 -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real/include -Ofast -g -Wall -Wdate-time -D_FORTIFY_SOURCE=3 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o -MF CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o.d -o CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o -c /tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build/Elasticity.c 285s [ 90%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o 285s /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DDOLFINX_VERSION=\"0.10.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DMDSPAN_USE_BRACKET_OPERATOR=0 -DMDSPAN_USE_PAREN_OPERATOR=1 -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real/include -Ofast -g -Wall -Wdate-time -D_FORTIFY_SOURCE=3 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o -MF CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o.d -o CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o -c /tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build/Poisson.c 286s [100%] Linking CXX executable dolfinx-scaling-test 286s /usr/bin/cmake -E cmake_link_script CMakeFiles/dolfinx-scaling-test.dir/link.txt --verbose=1 286s /usr/bin/c++ -Ofast -g -Wall -Wl,--dependency-file=CMakeFiles/dolfinx-scaling-test.dir/link.d "CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o" "CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o" -o dolfinx-scaling-test -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib: /usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.10.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.88.0 -lpthread /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.10.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.15.3 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.2 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.2 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.24/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib/libpetsc_real.so 286s make[2]: Leaving directory '/tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build' 286s [100%] Built target dolfinx-scaling-test 286s make[1]: Leaving directory '/tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build' 286s /usr/bin/cmake -E cmake_progress_start /tmp/autopkgtest.TViTOK/build.ecY/src/dolfinx-performance-tests-build/CMakeFiles 0 286s ==== elasticity weak scaling (2 processes with ndofs=10000) ==== 286s [2026-02-01 19:41:06.546] [RANK: 0] [info] Using partitioner with cell data (1 cell types) 286s [2026-02-01 19:41:06.546] [RANK: 0] [info] Compute partition of cells across ranks 286s [2026-02-01 19:41:06.546] [RANK: 0] [info] Building mesh dual graph 286s [2026-02-01 19:41:06.546] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 286s [2026-02-01 19:41:06.561] [RANK: 0] [info] Build nonlocal part of mesh dual graph 286s [2026-02-01 19:41:06.562] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 286s [2026-02-01 19:41:06.562] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 286s [2026-02-01 19:41:06.562] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 1, 1 286s [2026-02-01 19:41:06.563] [RANK: 0] [info] Graph edges (local: 65536, non-local: 578) 286s [2026-02-01 19:41:06.563] [RANK: 0] [info] Compute graph partition using PT-SCOTCH 287s [2026-02-01 19:41:07.256] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 287s [2026-02-01 19:41:07.262] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 287s [2026-02-01 19:41:07.263] [RANK: 0] [info] Extract basic topology: 67596->67596 287s [2026-02-01 19:41:07.263] [RANK: 0] [info] Build local dual graphs, re-order cells, and compute process boundary vertices. 287s [2026-02-01 19:41:07.263] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 287s [2026-02-01 19:41:07.277] [RANK: 0] [info] GPS pseudo-diameter:(106) 16796-1979 287s [2026-02-01 19:41:07.279] [RANK: 0] [info] Create topology (generalised) 287s [2026-02-01 19:41:07.280] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 287s [2026-02-01 19:41:07.281] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 287s [2026-02-01 19:41:07.285] [RANK: 0] [info] Compute ghost indices 287s [2026-02-01 19:41:07.285] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 287s [2026-02-01 19:41:07.285] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 287s [2026-02-01 19:41:07.287] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 287s [2026-02-01 19:41:07.287] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 287s [2026-02-01 19:41:07.292] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 287s [2026-02-01 19:41:07.293] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 287s [2026-02-01 19:41:07.293] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 287s [2026-02-01 19:41:07.293] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 287s [2026-02-01 19:41:07.294] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 287s [2026-02-01 19:41:07.294] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 287s [2026-02-01 19:41:07.294] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 287s [2026-02-01 19:41:07.295] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 287s [2026-02-01 19:41:07.295] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 287s [2026-02-01 19:41:07.295] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 1, 0.5 287s [2026-02-01 19:41:07.295] [RANK: 0] [info] Create Geometry (multiple) 287s [2026-02-01 19:41:07.295] [RANK: 0] [info] Got 1 dof layouts 287s [2026-02-01 19:41:07.295] [RANK: 0] [info] Checking required entities per dimension 287s [2026-02-01 19:41:07.295] [RANK: 0] [info] Cell type: 0 dofmap: 16899x4 287s [2026-02-01 19:41:07.297] [RANK: 0] [info] Global index computation 287s [2026-02-01 19:41:07.297] [RANK: 0] [info] Got 1 index_maps 287s [2026-02-01 19:41:07.297] [RANK: 0] [info] Get global indices 287s [2026-02-01 19:41:07.297] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 287s [2026-02-01 19:41:07.298] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 287s [2026-02-01 19:41:07.298] [RANK: 0] [info] Calling compute_local_to_global 287s [2026-02-01 19:41:07.298] [RANK: 0] [info] xdofs.size = 67596 287s [2026-02-01 19:41:07.298] [RANK: 0] [info] dofmap sizes = 67596 287s [2026-02-01 19:41:07.298] [RANK: 0] [info] all_dofmaps.size = 67596 287s [2026-02-01 19:41:07.298] [RANK: 0] [info] nodes.size = 3471 287s [2026-02-01 19:41:07.299] [RANK: 0] [info] Creating geometry with 1 dofmaps 287s UnitCube (18x15x21) to be refined 0 times 287s [2026-02-01 19:41:07.299] [RANK: 0] [info] Computing mesh entities of dimension 2 287s [2026-02-01 19:41:07.310] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 287s [2026-02-01 19:41:07.311] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 287s [2026-02-01 19:41:07.324] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 287s [2026-02-01 19:41:07.324] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 287s [2026-02-01 19:41:07.325] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 287s [2026-02-01 19:41:07.325] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. 287s [2026-02-01 19:41:07.326] [RANK: 0] [info] Checking required entities per dimension 287s [2026-02-01 19:41:07.326] [RANK: 0] [info] Cell type: 0 dofmap: 16899x4 287s [2026-02-01 19:41:07.327] [RANK: 0] [info] Global index computation 287s [2026-02-01 19:41:07.327] [RANK: 0] [info] Got 1 index_maps 287s [2026-02-01 19:41:07.328] [RANK: 0] [info] Get global indices 287s [2026-02-01 19:41:07.328] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 287s [2026-02-01 19:41:07.328] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 287s [2026-02-01 19:41:07.328] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) 287s [2026-02-01 19:41:07.339] [RANK: 0] [info] Column ghost size increased from 155 to 405 287s ---------------------------------------------------------------- 287s Test problem summary 287s dolfinx version: 0.10.0 287s dolfinx hash: ubuntu 287s ufl hash: 58f3dc30e5e56245b795ae796fe6a103649e8345 287s petsc version: PETSc Release Version 3.24.3, Jan 01, 2026 287s Problem type: elasticity 287s Scaling type: weak 287s Num processes: 2 287s Num cells: 34020 (34 thousand) 287s Total degrees of freedom: 20064 (20.1 thousand) 287s Average degrees of freedom per process: 10032 287s ---------------------------------------------------------------- 287s [2026-02-01 19:41:07.408] [RANK: 0] [info] PETSc Krylov solver starting to solve system. 288s KSP Object: 2 MPI processes 288s type: cg 288s maximum iterations=10000, initial guess is zero 288s tolerances: relative=1e-08, absolute=1e-50, divergence=10000. 288s left preconditioning 288s using PRECONDITIONED norm type for convergence test 288s PC Object: 2 MPI processes 288s type: gamg 288s type is MULTIPLICATIVE, levels=3 cycles=v 288s Cycles per PCApply=1 288s Using externally compute Galerkin coarse grid matrices 288s GAMG specific options 288s Threshold for dropping small values in graph on each level = -1. -1. -1. 288s Threshold scaling factor for each level not specified = 1. 288s AGG specific options 288s Number of levels of aggressive coarsening 1 288s Square graph aggressive coarsening 288s MatCoarsen Object: 2 MPI processes 288s type: misk 288s Number smoothing steps to construct prolongation 1 288s Complexity: grid = 1.09629 operator = 1.37819 288s Per-level complexity: op = operator, int = interpolation 288s #equations | #active PEs | avg nnz/row op | avg nnz/row int 288s 174 1 152 0 288s 1758 2 164 35 288s 20064 2 42 21 288s Coarse grid solver -- level 0 ------------------------------- 288s KSP Object: (mg_coarse_) 2 MPI processes 288s type: preonly 288s maximum iterations=10000, initial guess is zero 288s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 288s left preconditioning 288s using NONE norm type for convergence test 288s PC Object: (mg_coarse_) 2 MPI processes 288s type: bjacobi 288s number of blocks = 2 288s Local solver information for first block is in the following KSP and PC objects on rank 0: 288s Use -mg_coarse_ksp_view ::ascii_info_detail to display information for all blocks 288s KSP Object: (mg_coarse_sub_) 1 MPI process 288s type: preonly 288s maximum iterations=1, initial guess is zero 288s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 288s left preconditioning 288s using NONE norm type for convergence test 288s PC Object: (mg_coarse_sub_) 1 MPI process 288s type: lu 288s out-of-place factorization 288s tolerance for zero pivot 2.22045e-14 288s using diagonal shift on blocks to prevent zero pivot [INBLOCKS] 288s matrix ordering: nd 288s factor fill ratio given 5., needed 1.08731 288s Factored matrix follows: 288s Mat Object: (mg_coarse_sub_) 1 MPI process 288s type: seqaij 288s rows=174, cols=174, bs=6 288s package used to perform factorization: petsc 288s total: nonzeros=28692, allocated nonzeros=28692 288s using I-node routines: found 43 nodes, limit used is 5 288s linear system matrix = precond matrix: 288s Mat Object: (mg_coarse_sub_) 1 MPI process 288s type: seqaij 288s rows=174, cols=174, bs=6 288s total: nonzeros=26388, allocated nonzeros=26388 288s total number of mallocs used during MatSetValues calls=0 288s using I-node routines: found 54 nodes, limit used is 5 288s linear system matrix = precond matrix: 288s Mat Object: 2 MPI processes 288s type: mpiaij 288s rows=174, cols=174, bs=6 288s total: nonzeros=26388, allocated nonzeros=26388 288s total number of mallocs used during MatSetValues calls=0 288s using scalable MatPtAP() implementation 288s using I-node (on process 0) routines: found 54 nodes, limit used is 5 288s Down solver (pre-smoother) on level 1 ------------------------------- 288s KSP Object: (mg_levels_1_) 2 MPI processes 288s type: chebyshev 288s Chebyshev polynomial of first kind 288s eigenvalue targets used: min 0.260081, max 2.86089 288s eigenvalues provided (min 0.0288533, max 2.60081) with transform: [0. 0.1; 0. 1.1] 288s maximum iterations=2, nonzero initial guess 288s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 288s left preconditioning 288s using NONE norm type for convergence test 288s PC Object: (mg_levels_1_) 2 MPI processes 288s type: jacobi 288s type DIAGONAL 288s linear system matrix = precond matrix: 288s Mat Object: 2 MPI processes 288s type: mpiaij 288s rows=1758, cols=1758, bs=6 288s total: nonzeros=286596, allocated nonzeros=286596 288s total number of mallocs used during MatSetValues calls=0 288s using scalable MatPtAP() implementation 288s using I-node (on process 0) routines: found 266 nodes, limit used is 5 288s Up solver (post-smoother) same as down solver (pre-smoother) 288s Down solver (pre-smoother) on level 2 ------------------------------- 288s KSP Object: (mg_levels_2_) 2 MPI processes 288s type: chebyshev 288s Chebyshev polynomial of first kind 288s eigenvalue targets used: min 0.269598, max 2.96557 288s eigenvalues provided (min 0.07158, max 2.69598) with transform: [0. 0.1; 0. 1.1] 288s maximum iterations=2, nonzero initial guess 288s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 288s left preconditioning 288s using NONE norm type for convergence test 288s PC Object: (mg_levels_2_) 2 MPI processes 288s type: jacobi 288s type DIAGONAL 288s linear system matrix = precond matrix: 288s Mat Object: 2 MPI processes 288s type: mpiaij 288s rows=20064, cols=20064, bs=3 288s total: nonzeros=827586, allocated nonzeros=827586 288s total number of mallocs used during MatSetValues calls=0 288s has attached near null space 288s using I-node (on process 0) routines: found 3316 nodes, limit used is 5 288s Up solver (post-smoother) same as down solver (pre-smoother) 288s linear system matrix = precond matrix: 288s Mat Object: 2 MPI processes 288s type: mpiaij 288s rows=20064, cols=20064, bs=3 288s total: nonzeros=827586, allocated nonzeros=827586 288s total number of mallocs used during MatSetValues calls=0 288s has attached near null space 288s using I-node (on process 0) routines: found 3316 nodes, limit used is 5 288s 288s [MPI_MAX] Summary of timings (s) | reps avg tot 288s ------------------------------------------------------------------------------------------------------- 288s Build BoxMesh (tetrahedra) | 1 0.754436 0.754436 288s Build dofmap data | 2 0.002569 0.005138 288s Compute connectivity 2-0 | 1 0.000384 0.000384 288s Compute dof reordering map | 2 0.000240 0.000479 288s Compute entities of dim = 2 | 1 0.025910 0.025910 288s Compute graph partition (SCOTCH) | 1 0.690729 0.690729 288s Compute local part of mesh dual graph (mixed) | 2 0.014911 0.029823 288s Compute local-to-local map | 1 0.000438 0.000438 288s Compute non-local part of mesh dual graph | 1 0.001798 0.001798 288s Compute-local-to-global links for global/local adjacency list | 1 0.000438 0.000438 288s Distribute fixed-degree adjacency list to destination ranks | 1 0.010211 0.010211 288s Distribute row-wise data (scalable) | 1 0.001047 0.001047 288s GPS: create_level_structure | 2 0.000192 0.000575 288s Gibbs-Poole-Stockmeyer ordering | 1 0.001605 0.001605 288s Init MPI | 1 0.017336 0.017336 288s Init PETSc | 1 0.000546 0.000546 288s Init dofmap from element dofmap | 2 0.001559 0.003119 288s Init logging | 1 0.000005 0.000005 288s PETSc Krylov solver | 1 0.384189 0.384189 288s SparsityPattern::finalize | 1 0.004280 0.004280 288s Topology: create | 1 0.013914 0.013914 288s Topology: determine shared index ownership | 1 0.000759 0.000759 288s Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.001102 0.001102 288s ZZZ Assemble matrix | 1 0.059729 0.059729 288s ZZZ Assemble vector | 1 0.003072 0.003072 288s ZZZ Create Mesh | 1 0.754528 0.754528 288s ZZZ Create RHS function | 1 0.004508 0.004508 288s ZZZ Create boundary conditions | 1 0.000572 0.000572 288s ZZZ Create facets and facet->cell connectivity | 1 0.026291 0.026291 288s ZZZ Create forms | 1 0.000041 0.000041 288s ZZZ Create near-nullspace | 1 0.004043 0.004043 288s ZZZ FunctionSpace | 1 0.002680 0.002680 288s ZZZ Solve | 1 0.385780 0.385780 288s *** Number of Krylov iterations: 19 288s *** Solution norm: 3.00268e-05 288s **************************************************************************************************************************************************************** 288s *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** 288s **************************************************************************************************************************************************************** 288s 288s ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ 288s 288s ./dolfinx-scaling-test on a named autopkgtest with 2 processes, by ubuntu on Sun Feb 1 19:41:07 2026 288s Using PETSc Release Version 3.24.3, Jan 01, 2026 288s 288s Max Max/Min Avg Total 288s Time (sec): 1.249e+00 1.000 1.249e+00 288s Objects: 0.000e+00 0.000 0.000e+00 288s Flops: 2.155e+08 1.052 2.102e+08 4.204e+08 288s Flops/sec: 1.726e+08 1.052 1.684e+08 3.368e+08 288s MPI Msg Count: 4.015e+02 1.008 4.000e+02 8.000e+02 288s MPI Msg Len (bytes): 3.681e+06 1.001 9.198e+03 7.358e+06 288s MPI Reductions: 4.610e+02 1.000 288s 288s Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) 288s e.g., VecAXPY() for real vectors of length N --> 2N flops 288s and VecAXPY() for complex vectors of length N --> 8N flops 288s 288s Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- 288s Avg %Total Avg %Total Count %Total Avg %Total Count %Total 288s 0: Main Stage: 1.2485e+00 100.0% 4.2045e+08 100.0% 8.000e+02 100.0% 9.198e+03 100.0% 4.430e+02 96.1% 288s 288s ------------------------------------------------------------------------------------------------------------------------ 288s See the 'Profiling' chapter of the users' manual for details on interpreting output. 288s Phase summary info: 288s Count: number of times phase was executed 288s Time and Flop: Max - maximum over all processes 288s Ratio - ratio of maximum to minimum over all processes 288s Mess: number of messages sent 288s AvgLen: average message length (bytes) 288s Reduct: number of global reductions 288s Global: entire computation 288s Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). 288s %T - percent time in this phase %F - percent flop in this phase 288s %M - percent messages in this phase %L - percent message lengths in this phase 288s %R - percent reductions in this phase 288s Total Mflop/s: 1e-6 * (sum of flop over all processes)/(max time over all processes) 288s ------------------------------------------------------------------------------------------------------------------------ 288s Event Count Time (sec) Flop --- Global --- --- Stage ---- Total 288s Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s 288s ------------------------------------------------------------------------------------------------------------------------ 288s 288s --- Event Stage 0: Main Stage 288s 288s BuildTwoSided 109 1.0 1.2503e-02 4.3 0.00e+00 0.0 5.9e+01 4.0e+00 1.1e+02 1 0 7 0 24 1 0 7 0 25 0 288s BuildTwoSidedF 83 1.0 1.2526e-02 4.4 0.00e+00 0.0 3.2e+01 7.1e+04 8.3e+01 1 0 4 31 18 1 0 4 31 19 0 288s MatMult 199 1.0 3.8813e-02 1.0 1.18e+08 1.1 4.0e+02 6.6e+03 0.0e+00 3 55 50 36 0 3 55 50 36 0 5917 288s MatMultAdd 40 1.0 3.4296e-03 1.0 9.80e+06 1.1 6.0e+01 1.7e+03 0.0e+00 0 5 8 1 0 0 5 8 1 0 5569 288s MatMultTranspose 40 1.0 5.4375e-03 1.0 9.81e+06 1.1 6.0e+01 1.7e+03 0.0e+00 0 5 8 1 0 0 5 8 1 0 3515 288s MatSolve 20 0.0 4.7448e-04 0.0 1.14e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2411 288s MatLUFactorSym 1 1.0 1.1373e-03 186.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 288s MatLUFactorNum 1 1.0 1.4319e-03 816.8 3.06e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2139 288s MatScale 6 1.0 4.4366e-04 1.0 5.92e+05 1.1 4.0e+00 1.9e+03 0.0e+00 0 0 0 0 0 0 0 0 0 0 2603 288s MatResidual 40 1.0 7.4040e-03 1.0 2.30e+07 1.1 8.0e+01 6.3e+03 0.0e+00 1 11 10 7 0 1 11 10 7 0 6019 288s MatAssemblyBegin 45 1.0 2.0811e-02 1.9 0.00e+00 0.0 3.2e+01 7.1e+04 2.3e+01 1 0 4 31 5 1 0 4 31 5 0 288s MatAssemblyEnd 45 1.0 1.6399e-02 1.0 4.26e+04 1.0 5.8e+01 5.8e+02 9.0e+01 1 0 7 0 20 1 0 7 0 20 5 288s MatGetRowIJ 1 0.0 2.6240e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 288s MatCreateSubMat 1 1.0 2.0861e-03 1.0 0.00e+00 0.0 2.0e+00 3.3e+02 1.5e+01 0 0 0 0 3 0 0 0 0 3 0 288s MatGetOrdering 1 0.0 6.1032e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 288s MatCoarsen 2 1.0 7.0055e-04 1.0 0.00e+00 0.0 3.7e+01 8.6e+02 3.6e+01 0 0 5 0 8 0 0 5 0 8 0 288s MatZeroEntries 2 1.0 4.2414e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 288s MatView 6 1.5 3.0768e-03 1.8 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 288s MatAXPY 4 1.0 7.3207e-03 1.0 1.17e+05 1.0 8.0e+00 4.7e+02 1.4e+01 1 0 1 0 3 1 0 1 0 3 32 288s MatTranspose 9 1.0 3.5587e-03 1.0 0.00e+00 0.0 3.5e+01 2.2e+03 2.7e+01 0 0 4 1 6 0 0 4 1 6 0 288s MatMatMultSym 6 1.0 3.4756e-02 1.0 0.00e+00 0.0 2.0e+01 1.2e+04 2.0e+01 3 0 2 3 4 3 0 2 3 5 0 288s MatMatMultNum 2 1.0 8.0265e-03 1.0 6.90e+06 1.1 4.0e+00 3.8e+04 2.0e+00 1 3 0 2 0 1 3 0 2 0 1666 288s MatPtAPSymbolic 2 1.0 1.4817e-01 1.0 0.00e+00 0.0 2.1e+01 6.6e+04 1.4e+01 12 0 3 19 3 12 0 3 19 3 0 288s MatPtAPNumeric 2 1.0 1.0391e-01 1.0 5.77e+07 1.1 1.0e+01 1.3e+05 1.2e+01 8 26 1 18 3 8 26 1 18 3 1050 288s MatTrnMatMultSym 1 1.0 1.7479e-02 1.0 0.00e+00 0.0 1.4e+01 3.5e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 288s MatGetLocalMat 7 1.0 2.0899e-03 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 288s MatGetBrAoCol 6 1.0 1.1037e-03 1.0 0.00e+00 0.0 2.8e+01 5.2e+04 0.0e+00 0 0 4 20 0 0 0 4 20 0 0 288s MatCreateGraph 2 1.0 1.2624e-02 1.0 1.52e+05 1.0 4.8e+01 1.9e+03 5.0e+01 1 0 6 1 11 1 0 6 1 11 24 288s VecMDot 20 1.0 9.6639e-04 1.0 1.22e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 5 2484 288s VecTDot 40 1.0 6.8453e-04 1.0 8.09e+05 1.0 0.0e+00 0.0e+00 4.0e+01 0 0 0 0 9 0 0 0 0 9 2345 288s VecNorm 42 1.0 9.2917e-04 1.6 6.48e+05 1.0 0.0e+00 0.0e+00 4.2e+01 0 0 0 0 9 0 0 0 0 9 1380 288s VecScale 22 1.0 4.1171e-05 1.0 1.22e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 5830 288s VecCopy 124 1.0 2.4536e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 288s VecSet 141 1.0 9.2486e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 288s VecAXPY 40 1.0 1.6962e-04 1.1 7.91e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 9247 288s VecAYPX 258 1.0 1.0267e-03 1.1 2.14e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 4104 288s VecAXPBYCZ 80 1.0 5.0446e-04 1.0 2.22e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 8652 288s VecMAXPY 22 1.0 3.1479e-04 1.0 1.44e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 9012 288s VecAssemblyBegin 61 1.0 3.0513e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+01 0 0 0 0 13 0 0 0 0 14 0 288s VecAssemblyEnd 61 1.0 3.4195e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 288s VecPointwiseMult 182 1.0 6.8957e-04 1.0 1.01e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2880 288s VecReciprocal 8 1.0 9.9190e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 288s VecScatterBegin 343 1.0 7.8773e-04 1.0 0.00e+00 0.0 6.1e+02 5.2e+03 0.0e+00 0 0 76 43 0 0 0 76 43 0 0 288s VecScatterEnd 343 1.0 4.1545e-03 1.8 7.20e+03 1.2 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 3 288s VecNormalize 22 1.0 6.3121e-04 2.3 3.65e+05 1.0 0.0e+00 0.0e+00 2.2e+01 0 0 0 0 5 0 0 0 0 5 1141 288s SFSetGraph 26 1.0 7.9390e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 288s SFSetUp 26 1.0 3.7062e-04 1.1 0.00e+00 0.0 8.6e+01 5.7e+02 2.6e+01 0 0 11 1 6 0 0 11 1 6 0 288s SFBcastBegin 8 1.0 1.8047e-05 1.0 0.00e+00 0.0 1.6e+01 1.6e+03 0.0e+00 0 0 2 0 0 0 0 2 0 0 0 288s SFBcastEnd 8 1.0 1.9329e-05 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 288s SFReduceBegin 3 1.0 2.8003e-05 1.0 0.00e+00 0.0 5.0e+00 7.5e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 288s SFReduceEnd 3 1.0 1.1999e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 288s SFPack 354 1.0 3.2329e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 288s SFUnpack 354 1.0 6.3795e-05 1.2 7.20e+03 1.2 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 205 288s KSPSetUp 1 1.0 2.2694e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 288s KSPSolve 1 1.0 5.1515e-02 1.0 1.34e+08 1.0 4.8e+02 5.4e+03 8.0e+01 4 63 60 35 17 4 63 60 35 18 5130 288s KSPGMRESOrthog 20 1.0 1.2376e-03 1.0 2.44e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 5 3879 288s PCSetUp_GAMG+ 1 1.0 3.2820e-01 1.0 7.99e+07 1.1 3.0e+02 1.4e+04 3.1e+02 26 36 38 58 67 26 36 38 58 70 464 288s PCGAMGCreateG 2 1.0 1.2627e-02 1.0 1.52e+05 1.0 4.8e+01 1.9e+03 5.0e+01 1 0 6 1 11 1 0 6 1 11 24 288s GAMG Coarsen 4 1.0 1.9379e-02 1.0 0.00e+00 0.0 6.1e+01 9.3e+03 5.3e+01 2 0 8 8 11 2 0 8 8 12 0 288s GAMG MIS/Agg 2 1.0 1.8254e-02 1.0 0.00e+00 0.0 5.1e+01 1.0e+04 4.9e+01 1 0 6 7 11 1 0 6 7 11 0 288s PCGAMGProl 2 1.0 6.6795e-03 1.0 0.00e+00 0.0 8.7e+01 3.5e+03 7.6e+01 1 0 11 4 16 1 0 11 4 17 0 288s GAMG Prol-col 2 1.0 2.7315e-03 1.0 0.00e+00 0.0 7.5e+01 3.0e+03 5.6e+01 0 0 9 3 12 0 0 9 3 13 0 288s GAMG Prol-lift 2 1.0 3.7407e-03 1.0 0.00e+00 0.0 1.2e+01 7.2e+03 1.2e+01 0 0 2 1 3 0 0 2 1 3 0 288s PCGAMGOptProl 2 1.0 3.4492e-02 1.0 2.20e+07 1.1 6.4e+01 1.0e+04 6.6e+01 3 10 8 9 14 3 10 8 9 15 1240 288s GAMG smooth 2 1.0 2.6851e-02 1.0 7.46e+06 1.1 2.4e+01 1.6e+04 2.4e+01 2 3 3 5 5 2 3 3 5 5 538 288s PCGAMGCreateL 2 1.0 2.5422e-01 1.0 5.77e+07 1.1 4.2e+01 6.4e+04 6.0e+01 20 26 5 37 13 20 26 5 37 14 429 288s GAMG PtAP 2 1.0 2.5193e-01 1.0 5.77e+07 1.1 3.1e+01 8.6e+04 2.6e+01 20 26 4 36 6 20 26 4 36 6 433 288s GAMG Reduce 1 1.0 8.6405e-02 1.0 1.94e+07 1.4 2.2e+01 4.0e+04 4.7e+01 7 8 3 12 10 7 8 3 12 11 385 288s PCGAMG Squ l00 1 1.0 1.7481e-02 1.0 0.00e+00 0.0 1.4e+01 3.5e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 288s PCGAMG Gal l00 1 1.0 1.6805e-01 1.0 3.83e+07 1.0 2.0e+01 9.1e+04 1.3e+01 13 18 2 25 3 13 18 2 25 3 452 288s PCGAMG Opt l00 1 1.0 1.8455e-02 1.0 5.00e+06 1.0 1.2e+01 2.5e+04 1.1e+01 1 2 2 4 2 1 2 2 4 2 538 288s PCGAMG Gal l01 1 1.0 8.4111e-02 1.0 1.94e+07 1.4 1.1e+01 7.8e+04 1.3e+01 7 8 1 12 3 7 8 1 12 3 395 288s PCGAMG Opt l01 1 1.0 5.7543e-03 1.0 1.90e+06 1.2 1.2e+01 7.7e+03 1.1e+01 0 1 2 1 2 0 1 2 1 2 598 288s PCSetUp 1 1.0 3.2820e-01 1.0 7.99e+07 1.1 3.0e+02 1.4e+04 3.1e+02 26 36 38 58 67 26 36 38 58 70 464 288s PCSetUpOnBlocks 20 1.0 2.7109e-03 30.0 3.06e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1130 288s PCApply 20 1.0 4.5367e-02 1.0 1.16e+08 1.0 4.4e+02 5.1e+03 2.0e+01 4 54 55 30 4 4 54 55 30 5 5038 288s PCApplyOnBlocks 20 1.0 5.1048e-04 15.8 1.14e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2241 288s ------------------------------------------------------------------------------------------------------------------------ 288s 288s Object Type Creations Destructions. Reports information only for process 0. 288s 288s --- Event Stage 0: Main Stage 288s 288s Container 11 11 288s Matrix 82 82 288s Matrix Coarsen 2 2 288s Matrix Null Space 1 1 288s Index Set 60 60 288s IS L to G Mapping 5 5 288s Vector 179 179 288s Star Forest Graph 34 34 288s Krylov Solver 7 7 288s Preconditioner 7 7 288s Viewer 2 2 288s PetscRandom 2 2 288s Distributed Mesh 4 4 288s Discrete System 4 4 288s Weak Form 4 4 288s ======================================================================================================================== 288s Average time to get PetscTime(): 5.91e-08 288s Average time for MPI_Barrier(): 1.5382e-06 288s Average time for zero size MPI_Send(): 9.51e-07 288s #PETSc Option Table entries: 288s --ndofs 10000 # (source: command line) 288s --problem_type elasticity # (source: command line) 288s --scaling_type weak # (source: command line) 288s -ksp_rtol 1.0e-8 # (source: command line) 288s -ksp_type cg # (source: command line) 288s -ksp_view # (source: command line) 288s -log_view # (source: command line) 288s -matptap_via scalable # (source: command line) 288s -mg_levels_esteig_ksp_type cg # (source: command line) 288s -mg_levels_ksp_type chebyshev # (source: command line) 288s -mg_levels_pc_type jacobi # (source: command line) 288s -options_left # (source: command line) 288s -pc_gamg_coarse_eq_limit 1000 # (source: command line) 288s -pc_type gamg # (source: command line) 288s #End of PETSc Option Table entries 288s Compiled without FORTRAN kernels 288s Compiled with full precision matrices (default) 288s sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 288s Configure options: --build=x86_64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --with-library-name-suffix=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi " --CXX_LINKER_FLAGS="-Wl,--no-as-needed -Wl,-z,defs" --CC_LINKER_FLAGS=-Wl,-z,defs --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real --PETSC_ARCH=x86_64-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" CXXFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" FCFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=3" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,--package-metadata=%7B%22type%22:%22deb%22%2C%22os%22:%22ubuntu%22%2C%22name%22:%22petsc%22%2C%22version%22:%223.24.3+dfsg1-1ubuntu1%22%2C%22architecture%22:%22amd64%22%7D -flto=auto -ffat-lto-objects -Wl,-z,relro -fPIC" MAKEFLAGS= 288s ----------------------------------------- 288s Libraries compiled on 2026-01-26 06:54:57 on reproducible 288s Machine characteristics: Linux-6.8.0-90-generic-x86_64-with-glibc2.42 288s Using PETSc directory: /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real 288s Using PETSc arch: 288s ----------------------------------------- 288s 288s Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -Wdate-time -D_FORTIFY_SOURCE=3 288s Using Fortran compiler: mpif90 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=3 288s ----------------------------------------- 288s 288s Using include paths: -I/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu-dist -I/usr/include/superlu -I/usr/include/scotch -I/usr/include/hdf5/openmpi 288s ----------------------------------------- 288s 288s Using C linker: mpicc 288s Using Fortran linker: mpif90 288s Using libraries: -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/gcc/x86_64-linux-gnu/15 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -lfftw3 -lfftw3_mpi -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu_dist -lsuperlu -llapack -lblas -lptesmumps -lptscotch -lscotch -lptscotcherr -lhdf5 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lm -lOpenCL -lyaml -lX11 -lstdc++ -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ 288s ----------------------------------------- 288s 288s #PETSc Option Table entries: 288s --ndofs 10000 # (source: command line) 288s --problem_type elasticity # (source: command line) 288s --scaling_type weak # (source: command line) 288s -ksp_rtol 1.0e-8 # (source: command line) 288s -ksp_type cg # (source: command line) 288s -ksp_view # (source: command line) 288s -log_view # (source: command line) 288s -matptap_via scalable # (source: command line) 288s -mg_levels_esteig_ksp_type cg # (source: command line) 288s -mg_levels_ksp_type chebyshev # (source: command line) 288s -mg_levels_pc_type jacobi # (source: command line) 288s -options_left # (source: command line) 288s -pc_gamg_coarse_eq_limit 1000 # (source: command line) 288s -pc_type gamg # (source: command line) 288s #End of PETSc Option Table entries 288s WARNING! There are options you set that were not used! 288s WARNING! could be spelling mistake, etc! 288s There are 4 unused database options. They are: 288s Option left: name:--ndofs value: 10000 source: command line 288s Option left: name:--problem_type value: elasticity source: command line 288s Option left: name:--scaling_type value: weak source: command line 288s Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line 288s ==== elasticity strong scaling (2 processes with ndofs=20000) ==== 288s [2026-02-01 19:41:08.062] [RANK: 0] [info] Using partitioner with cell data (1 cell types) 288s [2026-02-01 19:41:08.062] [RANK: 0] [info] Compute partition of cells across ranks 288s [2026-02-01 19:41:08.062] [RANK: 0] [info] Building mesh dual graph 288s [2026-02-01 19:41:08.062] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 288s [2026-02-01 19:41:08.078] [RANK: 0] [info] Build nonlocal part of mesh dual graph 288s [2026-02-01 19:41:08.079] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 288s [2026-02-01 19:41:08.079] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 288s [2026-02-01 19:41:08.079] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 1, 1 288s [2026-02-01 19:41:08.080] [RANK: 0] [info] Graph edges (local: 65536, non-local: 578) 288s [2026-02-01 19:41:08.080] [RANK: 0] [info] Compute graph partition using PT-SCOTCH 289s [2026-02-01 19:41:08.763] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 289s [2026-02-01 19:41:08.764] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 289s [2026-02-01 19:41:08.765] [RANK: 0] [info] Extract basic topology: 66828->66828 289s [2026-02-01 19:41:08.765] [RANK: 0] [info] Build local dual graphs, re-order cells, and compute process boundary vertices. 289s [2026-02-01 19:41:08.765] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 289s [2026-02-01 19:41:08.780] [RANK: 0] [info] GPS pseudo-diameter:(106) 1517-13677 289s [2026-02-01 19:41:08.782] [RANK: 0] [info] Create topology (generalised) 289s [2026-02-01 19:41:08.783] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 289s [2026-02-01 19:41:08.783] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 289s [2026-02-01 19:41:08.788] [RANK: 0] [info] Compute ghost indices 289s [2026-02-01 19:41:08.788] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 289s [2026-02-01 19:41:08.788] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 289s [2026-02-01 19:41:08.790] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 289s [2026-02-01 19:41:08.790] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 289s [2026-02-01 19:41:08.795] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 289s [2026-02-01 19:41:08.795] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 289s [2026-02-01 19:41:08.795] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 289s [2026-02-01 19:41:08.795] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 289s [2026-02-01 19:41:08.796] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 289s [2026-02-01 19:41:08.796] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 289s [2026-02-01 19:41:08.797] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 289s [2026-02-01 19:41:08.797] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 289s [2026-02-01 19:41:08.797] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 289s [2026-02-01 19:41:08.797] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 1, 0.5 289s [2026-02-01 19:41:08.797] [RANK: 0] [info] Create Geometry (multiple) 289s [2026-02-01 19:41:08.797] [RANK: 0] [info] Got 1 dof layouts 289s [2026-02-01 19:41:08.797] [RANK: 0] [info] Checking required entities per dimension 289s [2026-02-01 19:41:08.797] [RANK: 0] [info] Cell type: 0 dofmap: 16707x4 289s [2026-02-01 19:41:08.799] [RANK: 0] [info] Global index computation 289s [2026-02-01 19:41:08.799] [RANK: 0] [info] Got 1 index_maps 289s [2026-02-01 19:41:08.799] [RANK: 0] [info] Get global indices 289s [2026-02-01 19:41:08.800] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 289s [2026-02-01 19:41:08.800] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 289s [2026-02-01 19:41:08.800] [RANK: 0] [info] Calling compute_local_to_global 289s [2026-02-01 19:41:08.800] [RANK: 0] [info] xdofs.size = 66828 289s [2026-02-01 19:41:08.801] [RANK: 0] [info] dofmap sizes = 66828 289s [2026-02-01 19:41:08.801] [RANK: 0] [info] all_dofmaps.size = 66828 289s [2026-02-01 19:41:08.801] [RANK: 0] [info] nodes.size = 3437 289s [2026-02-01 19:41:08.802] [RANK: 0] [info] Creating geometry with 1 dofmaps 289s UnitCube (18x15x21) to be refined 0 times 289s [2026-02-01 19:41:08.802] [RANK: 0] [info] Computing mesh entities of dimension 2 289s [2026-02-01 19:41:08.813] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 289s [2026-02-01 19:41:08.813] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 289s [2026-02-01 19:41:08.827] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 289s [2026-02-01 19:41:08.828] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 289s [2026-02-01 19:41:08.828] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 289s [2026-02-01 19:41:08.828] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. 289s [2026-02-01 19:41:08.829] [RANK: 0] [info] Checking required entities per dimension 289s [2026-02-01 19:41:08.829] [RANK: 0] [info] Cell type: 0 dofmap: 16707x4 289s [2026-02-01 19:41:08.831] [RANK: 0] [info] Global index computation 289s [2026-02-01 19:41:08.831] [RANK: 0] [info] Got 1 index_maps 289s [2026-02-01 19:41:08.831] [RANK: 0] [info] Get global indices 289s [2026-02-01 19:41:08.831] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 289s [2026-02-01 19:41:08.831] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 289s [2026-02-01 19:41:08.832] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) 289s [2026-02-01 19:41:08.842] [RANK: 0] [info] Column ghost size increased from 155 to 419 289s ---------------------------------------------------------------- 289s Test problem summary 289s dolfinx version: 0.10.0 289s dolfinx hash: ubuntu 289s ufl hash: 58f3dc30e5e56245b795ae796fe6a103649e8345 289s petsc version: PETSc Release Version 3.24.3, Jan 01, 2026 289s Problem type: elasticity 289s Scaling type: strong 289s Num processes: 2 289s Num cells: 34020 (34 thousand) 289s Total degrees of freedom: 20064 (20.1 thousand) 289s Average degrees of freedom per process: 10032 289s ---------------------------------------------------------------- 289s [2026-02-01 19:41:08.912] [RANK: 0] [info] PETSc Krylov solver starting to solve system. 289s KSP Object: 2 MPI processes 289s type: cg 289s maximum iterations=10000, initial guess is zero 289s tolerances: relative=1e-08, absolute=1e-50, divergence=10000. 289s left preconditioning 289s using PRECONDITIONED norm type for convergence test 289s PC Object: 2 MPI processes 289s type: gamg 289s type is MULTIPLICATIVE, levels=3 cycles=v 289s Cycles per PCApply=1 289s Using externally compute Galerkin coarse grid matrices 289s GAMG specific options 289s Threshold for dropping small values in graph on each level = -1. -1. -1. 289s Threshold scaling factor for each level not specified = 1. 289s AGG specific options 289s Number of levels of aggressive coarsening 1 289s Square graph aggressive coarsening 289s MatCoarsen Object: 2 MPI processes 289s type: misk 289s Number smoothing steps to construct prolongation 1 289s Complexity: grid = 1.0939 operator = 1.35087 289s Per-level complexity: op = operator, int = interpolation 289s #equations | #active PEs | avg nnz/row op | avg nnz/row int 289s 174 1 149 0 289s 1710 2 155 36 289s 20064 2 42 21 289s Coarse grid solver -- level 0 ------------------------------- 289s KSP Object: (mg_coarse_) 2 MPI processes 289s type: preonly 289s maximum iterations=10000, initial guess is zero 289s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 289s left preconditioning 289s using NONE norm type for convergence test 289s PC Object: (mg_coarse_) 2 MPI processes 289s type: bjacobi 289s number of blocks = 2 289s Local solver information for first block is in the following KSP and PC objects on rank 0: 289s Use -mg_coarse_ksp_view ::ascii_info_detail to display information for all blocks 289s KSP Object: (mg_coarse_sub_) 1 MPI process 289s type: preonly 289s maximum iterations=1, initial guess is zero 289s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 289s left preconditioning 289s using NONE norm type for convergence test 289s PC Object: (mg_coarse_sub_) 1 MPI process 289s type: lu 289s out-of-place factorization 289s tolerance for zero pivot 2.22045e-14 289s using diagonal shift on blocks to prevent zero pivot [INBLOCKS] 289s matrix ordering: nd 289s factor fill ratio given 5., needed 1.06137 289s Factored matrix follows: 289s Mat Object: (mg_coarse_sub_) 1 MPI process 289s type: seqaij 289s rows=174, cols=174, bs=6 289s package used to perform factorization: petsc 289s total: nonzeros=27396, allocated nonzeros=27396 289s using I-node routines: found 53 nodes, limit used is 5 289s linear system matrix = precond matrix: 289s Mat Object: (mg_coarse_sub_) 1 MPI process 289s type: seqaij 289s rows=174, cols=174, bs=6 289s total: nonzeros=25812, allocated nonzeros=25812 289s total number of mallocs used during MatSetValues calls=0 289s using I-node routines: found 56 nodes, limit used is 5 289s linear system matrix = precond matrix: 289s Mat Object: 2 MPI processes 289s type: mpiaij 289s rows=174, cols=174, bs=6 289s total: nonzeros=25812, allocated nonzeros=25812 289s total number of mallocs used during MatSetValues calls=0 289s using scalable MatPtAP() implementation 289s using I-node (on process 0) routines: found 56 nodes, limit used is 5 289s Down solver (pre-smoother) on level 1 ------------------------------- 289s KSP Object: (mg_levels_1_) 2 MPI processes 289s type: chebyshev 289s Chebyshev polynomial of first kind 289s eigenvalue targets used: min 0.318677, max 3.50544 289s eigenvalues provided (min 0.0122044, max 3.18677) with transform: [0. 0.1; 0. 1.1] 289s maximum iterations=2, nonzero initial guess 289s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 289s left preconditioning 289s using NONE norm type for convergence test 289s PC Object: (mg_levels_1_) 2 MPI processes 289s type: jacobi 289s type DIAGONAL 289s linear system matrix = precond matrix: 289s Mat Object: 2 MPI processes 289s type: mpiaij 289s rows=1710, cols=1710, bs=6 289s total: nonzeros=264564, allocated nonzeros=264564 289s total number of mallocs used during MatSetValues calls=0 289s using scalable MatPtAP() implementation 289s using I-node (on process 0) routines: found 260 nodes, limit used is 5 289s Up solver (post-smoother) same as down solver (pre-smoother) 289s Down solver (pre-smoother) on level 2 ------------------------------- 289s KSP Object: (mg_levels_2_) 2 MPI processes 289s type: chebyshev 289s Chebyshev polynomial of first kind 289s eigenvalue targets used: min 0.267873, max 2.94661 289s eigenvalues provided (min 0.071099, max 2.67873) with transform: [0. 0.1; 0. 1.1] 289s maximum iterations=2, nonzero initial guess 289s tolerances: relative=1e-05, absolute=1e-50, divergence=10000. 289s left preconditioning 289s using NONE norm type for convergence test 289s PC Object: (mg_levels_2_) 2 MPI processes 289s type: jacobi 289s type DIAGONAL 289s linear system matrix = precond matrix: 289s Mat Object: 2 MPI processes 289s type: mpiaij 289s rows=20064, cols=20064, bs=3 289s total: nonzeros=827586, allocated nonzeros=827586 289s total number of mallocs used during MatSetValues calls=0 289s has attached near null space 289s using I-node (on process 0) routines: found 3282 nodes, limit used is 5 289s Up solver (post-smoother) same as down solver (pre-smoother) 289s linear system matrix = precond matrix: 289s Mat Object: 2 MPI processes 289s type: mpiaij 289s rows=20064, cols=20064, bs=3 289s total: nonzeros=827586, allocated nonzeros=827586 289s total number of mallocs used during MatSetValues calls=0 289s has attached near null space 289s using I-node (on process 0) routines: found 3282 nodes, limit used is 5 289s 289s [MPI_MAX] Summary of timings (s) | reps avg tot 289s ------------------------------------------------------------------------------------------------------- 289s Build BoxMesh (tetrahedra) | 1 0.740635 0.740635 289s Build dofmap data | 2 0.002725 0.005451 289s Compute connectivity 2-0 | 1 0.000432 0.000432 289s Compute dof reordering map | 2 0.000190 0.000381 289s Compute entities of dim = 2 | 1 0.026529 0.026529 289s Compute graph partition (SCOTCH) | 1 0.681980 0.681980 289s Compute local part of mesh dual graph (mixed) | 2 0.015201 0.030402 289s Compute local-to-local map | 1 0.000494 0.000494 289s Compute non-local part of mesh dual graph | 1 0.002380 0.002380 289s Compute-local-to-global links for global/local adjacency list | 1 0.000401 0.000401 289s Distribute fixed-degree adjacency list to destination ranks | 1 0.004380 0.004380 289s Distribute row-wise data (scalable) | 1 0.000834 0.000834 289s GPS: create_level_structure | 2 0.000195 0.000779 289s Gibbs-Poole-Stockmeyer ordering | 1 0.001923 0.001923 289s Init MPI | 1 0.016719 0.016719 289s Init PETSc | 1 0.000603 0.000603 289s Init dofmap from element dofmap | 2 0.001637 0.003274 289s Init logging | 1 0.000005 0.000005 289s PETSc Krylov solver | 1 0.372847 0.372847 289s SparsityPattern::finalize | 1 0.004480 0.004480 289s Topology: create | 1 0.013743 0.013743 289s Topology: determine shared index ownership | 1 0.000910 0.000910 289s Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.001110 0.001110 289s ZZZ Assemble matrix | 1 0.060358 0.060358 289s ZZZ Assemble vector | 1 0.003271 0.003271 289s ZZZ Create Mesh | 1 0.740729 0.740729 289s ZZZ Create RHS function | 1 0.004363 0.004363 289s ZZZ Create boundary conditions | 1 0.000559 0.000559 289s ZZZ Create facets and facet->cell connectivity | 1 0.027033 0.027033 289s ZZZ Create forms | 1 0.000057 0.000057 289s ZZZ Create near-nullspace | 1 0.004057 0.004057 289s ZZZ FunctionSpace | 1 0.002864 0.002864 289s ZZZ Solve | 1 0.374636 0.374636 289s *** Number of Krylov iterations: 20 289s *** Solution norm: 3.00268e-05 289s **************************************************************************************************************************************************************** 289s *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** 289s **************************************************************************************************************************************************************** 289s 289s ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ 289s 289s ./dolfinx-scaling-test on a named autopkgtest with 2 processes, by ubuntu on Sun Feb 1 19:41:09 2026 289s Using PETSc Release Version 3.24.3, Jan 01, 2026 289s 289s Max Max/Min Avg Total 289s Time (sec): 1.225e+00 1.000 1.225e+00 289s Objects: 0.000e+00 0.000 0.000e+00 289s Flops: 2.170e+08 1.045 2.124e+08 4.247e+08 289s Flops/sec: 1.771e+08 1.045 1.733e+08 3.466e+08 289s MPI Msg Count: 4.135e+02 1.007 4.120e+02 8.240e+02 289s MPI Msg Len (bytes): 3.742e+06 1.001 9.078e+03 7.480e+06 289s MPI Reductions: 4.650e+02 1.000 289s 289s Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) 289s e.g., VecAXPY() for real vectors of length N --> 2N flops 289s and VecAXPY() for complex vectors of length N --> 8N flops 289s 289s Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- 289s Avg %Total Avg %Total Count %Total Avg %Total Count %Total 289s 0: Main Stage: 1.2254e+00 100.0% 4.2472e+08 100.0% 8.240e+02 100.0% 9.078e+03 100.0% 4.470e+02 96.1% 289s 289s ------------------------------------------------------------------------------------------------------------------------ 289s See the 'Profiling' chapter of the users' manual for details on interpreting output. 289s Phase summary info: 289s Count: number of times phase was executed 289s Time and Flop: Max - maximum over all processes 289s Ratio - ratio of maximum to minimum over all processes 289s Mess: number of messages sent 289s AvgLen: average message length (bytes) 289s Reduct: number of global reductions 289s Global: entire computation 289s Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). 289s %T - percent time in this phase %F - percent flop in this phase 289s %M - percent messages in this phase %L - percent message lengths in this phase 289s %R - percent reductions in this phase 289s Total Mflop/s: 1e-6 * (sum of flop over all processes)/(max time over all processes) 289s ------------------------------------------------------------------------------------------------------------------------ 289s Event Count Time (sec) Flop --- Global --- --- Stage ---- Total 289s Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s 289s ------------------------------------------------------------------------------------------------------------------------ 289s 289s --- Event Stage 0: Main Stage 289s 289s BuildTwoSided 109 1.0 1.1025e-02 19.2 0.00e+00 0.0 5.9e+01 4.0e+00 1.1e+02 0 0 7 0 23 0 0 7 0 24 0 289s BuildTwoSidedF 83 1.0 1.1039e-02 24.3 0.00e+00 0.0 3.2e+01 6.9e+04 8.3e+01 0 0 4 29 18 0 0 4 29 19 0 289s MatMult 208 1.0 4.0493e-02 1.0 1.22e+08 1.1 4.2e+02 6.8e+03 0.0e+00 3 56 50 38 0 3 56 50 38 0 5828 289s MatMultAdd 42 1.0 3.5488e-03 1.0 1.00e+07 1.0 6.3e+01 1.7e+03 0.0e+00 0 5 8 1 0 0 5 8 1 0 5564 289s MatMultTranspose 42 1.0 5.9951e-03 1.0 1.00e+07 1.0 6.3e+01 1.7e+03 0.0e+00 0 5 8 1 0 0 5 8 1 0 3295 289s MatSolve 21 0.0 5.0671e-04 0.0 1.15e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2264 289s MatLUFactorSym 1 1.0 7.8908e-04 123.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 289s MatLUFactorNum 1 1.0 1.1501e-03 614.0 2.72e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2365 289s MatScale 6 1.0 4.6946e-04 1.1 5.80e+05 1.0 4.0e+00 1.9e+03 0.0e+00 0 0 0 0 0 0 0 0 0 0 2426 289s MatResidual 42 1.0 7.7265e-03 1.0 2.38e+07 1.1 8.4e+01 6.4e+03 0.0e+00 1 11 10 7 0 1 11 10 7 0 5937 289s MatAssemblyBegin 45 1.0 1.8915e-02 2.2 0.00e+00 0.0 3.2e+01 6.9e+04 2.3e+01 1 0 4 29 5 1 0 4 29 5 0 289s MatAssemblyEnd 45 1.0 1.5661e-02 1.0 4.05e+04 1.0 5.8e+01 5.9e+02 9.0e+01 1 0 7 0 19 1 0 7 0 20 5 289s MatGetRowIJ 1 0.0 2.4047e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 289s MatCreateSubMat 1 1.0 2.1242e-03 1.0 0.00e+00 0.0 2.0e+00 3.3e+02 1.5e+01 0 0 0 0 3 0 0 0 0 3 0 289s MatGetOrdering 1 0.0 6.1122e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 289s MatCoarsen 2 1.0 7.4768e-04 1.0 0.00e+00 0.0 3.7e+01 8.7e+02 3.6e+01 0 0 4 0 8 0 0 4 0 8 0 289s MatZeroEntries 2 1.0 1.0181e-04 3.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 289s MatView 6 1.5 3.9508e-03 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 289s MatAXPY 4 1.0 5.3320e-03 1.0 1.18e+05 1.0 8.0e+00 4.8e+02 1.4e+01 0 0 1 0 3 0 0 1 0 3 43 289s MatTranspose 9 1.0 3.7262e-03 1.0 0.00e+00 0.0 3.5e+01 2.2e+03 2.7e+01 0 0 4 1 6 0 0 4 1 6 0 289s MatMatMultSym 6 1.0 3.3545e-02 1.0 0.00e+00 0.0 2.0e+01 1.2e+04 2.0e+01 3 0 2 3 4 3 0 2 3 4 0 289s MatMatMultNum 2 1.0 7.6709e-03 1.0 6.80e+06 1.1 4.0e+00 3.9e+04 2.0e+00 1 3 0 2 0 1 3 0 2 0 1708 289s MatPtAPSymbolic 2 1.0 1.3928e-01 1.0 0.00e+00 0.0 2.1e+01 6.5e+04 1.4e+01 11 0 3 18 3 11 0 3 18 3 0 289s MatPtAPNumeric 2 1.0 9.7869e-02 1.0 5.43e+07 1.1 1.0e+01 1.2e+05 1.2e+01 8 25 1 16 3 8 25 1 16 3 1080 289s MatTrnMatMultSym 1 1.0 1.8194e-02 1.0 0.00e+00 0.0 1.4e+01 3.6e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 289s MatGetLocalMat 7 1.0 2.1445e-03 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 289s MatGetBrAoCol 6 1.0 1.2039e-03 1.0 0.00e+00 0.0 2.8e+01 5.2e+04 0.0e+00 0 0 3 19 0 0 0 3 19 0 0 289s MatCreateGraph 2 1.0 1.0479e-02 1.0 1.53e+05 1.1 4.8e+01 1.9e+03 5.0e+01 1 0 6 1 11 1 0 6 1 11 28 289s VecMDot 20 1.0 1.0281e-03 1.0 1.23e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 2329 289s VecTDot 42 1.0 7.4052e-04 1.0 8.58e+05 1.0 0.0e+00 0.0e+00 4.2e+01 0 0 0 0 9 0 0 0 0 9 2276 289s VecNorm 43 1.0 9.7973e-04 1.5 6.74e+05 1.0 0.0e+00 0.0e+00 4.3e+01 0 0 0 0 9 0 0 0 0 10 1349 289s VecScale 22 1.0 4.2855e-05 1.1 1.23e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 5589 289s VecCopy 130 1.0 2.5056e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 289s VecSet 148 1.0 7.9518e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 289s VecAXPY 42 1.0 1.9838e-04 1.0 8.40e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 8311 289s VecAYPX 271 1.0 1.1070e-03 1.0 2.26e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 3993 289s VecAXPBYCZ 84 1.0 5.1668e-04 1.1 2.34e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 8850 289s VecMAXPY 22 1.0 2.6629e-04 1.0 1.45e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 10630 289s VecAssemblyBegin 61 1.0 2.5210e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+01 0 0 0 0 13 0 0 0 0 13 0 289s VecAssemblyEnd 61 1.0 3.1264e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 289s VecPointwiseMult 190 1.0 7.3801e-04 1.0 1.06e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2803 289s VecReciprocal 8 1.0 1.0298e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 289s VecScatterBegin 356 1.0 8.2526e-04 1.1 0.00e+00 0.0 6.3e+02 5.3e+03 0.0e+00 0 0 77 44 0 0 0 77 44 0 0 289s VecScatterEnd 356 1.0 4.2836e-03 1.3 7.43e+03 1.3 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 3 289s VecNormalize 22 1.0 5.5070e-04 2.0 3.68e+05 1.0 0.0e+00 0.0e+00 2.2e+01 0 0 0 0 5 0 0 0 0 5 1305 289s SFSetGraph 26 1.0 9.4842e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 289s SFSetUp 26 1.0 4.5797e-04 1.2 0.00e+00 0.0 8.6e+01 5.8e+02 2.6e+01 0 0 10 1 6 0 0 10 1 6 0 289s SFBcastBegin 8 1.0 1.9029e-05 1.0 0.00e+00 0.0 1.6e+01 1.6e+03 0.0e+00 0 0 2 0 0 0 0 2 0 0 0 289s SFBcastEnd 8 1.0 1.9679e-05 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 289s SFReduceBegin 3 1.0 2.8754e-05 1.1 0.00e+00 0.0 5.0e+00 7.7e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 289s SFReduceEnd 3 1.0 1.0186e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 289s SFPack 367 1.0 3.2402e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 289s SFUnpack 367 1.0 7.6571e-05 1.1 7.43e+03 1.3 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 173 289s KSPSetUp 1 1.0 1.9880e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 289s KSPSolve 1 1.0 5.3734e-02 1.0 1.39e+08 1.0 5.0e+02 5.5e+03 8.4e+01 4 64 61 37 18 4 64 61 37 19 5075 289s KSPGMRESOrthog 20 1.0 1.2745e-03 1.0 2.45e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 3758 289s PCSetUp_GAMG+ 1 1.0 3.1169e-01 1.0 7.63e+07 1.1 3.0e+02 1.4e+04 3.1e+02 25 35 37 57 66 25 35 37 57 69 475 289s PCGAMGCreateG 2 1.0 1.0482e-02 1.0 1.53e+05 1.1 4.8e+01 1.9e+03 5.0e+01 1 0 6 1 11 1 0 6 1 11 28 289s GAMG Coarsen 4 1.0 2.0144e-02 1.0 0.00e+00 0.0 6.1e+01 9.7e+03 5.3e+01 2 0 7 8 11 2 0 7 8 12 0 289s GAMG MIS/Agg 2 1.0 1.9007e-02 1.0 0.00e+00 0.0 5.1e+01 1.1e+04 4.9e+01 2 0 6 7 11 2 0 6 7 11 0 289s PCGAMGProl 2 1.0 6.4711e-03 1.0 0.00e+00 0.0 8.7e+01 3.6e+03 7.6e+01 1 0 11 4 16 1 0 11 4 17 0 289s GAMG Prol-col 2 1.0 2.5448e-03 1.0 0.00e+00 0.0 7.5e+01 3.0e+03 5.6e+01 0 0 9 3 12 0 0 9 3 13 0 289s GAMG Prol-lift 2 1.0 3.7306e-03 1.0 0.00e+00 0.0 1.2e+01 7.4e+03 1.2e+01 0 0 1 1 3 0 0 1 1 3 0 289s PCGAMGOptProl 2 1.0 3.4287e-02 1.0 2.18e+07 1.1 6.4e+01 1.0e+04 6.6e+01 3 10 8 9 14 3 10 8 9 15 1226 289s GAMG smooth 2 1.0 2.6444e-02 1.0 7.35e+06 1.1 2.4e+01 1.7e+04 2.4e+01 2 3 3 5 5 2 3 3 5 5 536 289s PCGAMGCreateL 2 1.0 2.3939e-01 1.0 5.43e+07 1.1 4.2e+01 6.1e+04 6.0e+01 20 25 5 34 13 20 25 5 34 13 442 289s GAMG PtAP 2 1.0 2.3702e-01 1.0 5.43e+07 1.1 3.1e+01 8.3e+04 2.6e+01 19 25 4 34 6 19 25 4 34 6 446 289s GAMG Reduce 1 1.0 7.8086e-02 1.0 1.74e+07 1.1 2.2e+01 3.9e+04 4.7e+01 6 8 3 11 10 6 8 3 11 11 416 289s PCGAMG Squ l00 1 1.0 1.8196e-02 1.0 0.00e+00 0.0 1.4e+01 3.6e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 289s PCGAMG Gal l00 1 1.0 1.6152e-01 1.0 3.70e+07 1.0 2.0e+01 8.6e+04 1.3e+01 13 17 2 23 3 13 17 2 23 3 453 289s PCGAMG Opt l00 1 1.0 1.8384e-02 1.0 5.06e+06 1.0 1.2e+01 2.6e+04 1.1e+01 1 2 1 4 2 1 2 1 4 2 540 289s PCGAMG Gal l01 1 1.0 7.5725e-02 1.0 1.74e+07 1.1 1.1e+01 7.6e+04 1.3e+01 6 8 1 11 3 6 8 1 11 3 429 289s PCGAMG Opt l01 1 1.0 5.5280e-03 1.0 1.75e+06 1.2 1.2e+01 7.5e+03 1.1e+01 0 1 1 1 2 0 1 1 1 2 574 289s PCSetUp 1 1.0 3.1169e-01 1.0 7.63e+07 1.1 3.0e+02 1.4e+04 3.1e+02 25 35 37 57 66 25 35 37 57 69 475 289s PCSetUpOnBlocks 21 1.0 2.0848e-03 20.0 2.72e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1305 289s PCApply 21 1.0 4.6925e-02 1.0 1.20e+08 1.0 4.6e+02 5.1e+03 2.1e+01 4 55 56 32 5 4 55 56 32 5 5010 289s PCApplyOnBlocks 21 1.0 5.4201e-04 18.9 1.15e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2116 289s ------------------------------------------------------------------------------------------------------------------------ 289s 289s Object Type Creations Destructions. Reports information only for process 0. 289s 289s --- Event Stage 0: Main Stage 289s 289s Container 11 11 289s Matrix 82 82 289s Matrix Coarsen 2 2 289s Matrix Null Space 1 1 289s Index Set 60 60 289s IS L to G Mapping 5 5 289s Vector 179 179 289s Star Forest Graph 34 34 289s Krylov Solver 7 7 289s Preconditioner 7 7 289s Viewer 2 2 289s PetscRandom 2 2 289s Distributed Mesh 4 4 289s Discrete System 4 4 289s Weak Form 4 4 289s ======================================================================================================================== 289s Average time to get PetscTime(): 6.2e-08 289s Average time for MPI_Barrier(): 4.766e-07 289s Average time for zero size MPI_Send(): 1.142e-06 289s #PETSc Option Table entries: 289s --ndofs 20000 # (source: command line) 289s --problem_type elasticity # (source: command line) 289s --scaling_type strong # (source: command line) 289s -ksp_rtol 1.0e-8 # (source: command line) 289s -ksp_type cg # (source: command line) 289s -ksp_view # (source: command line) 289s -log_view # (source: command line) 289s -matptap_via scalable # (source: command line) 289s -mg_levels_esteig_ksp_type cg # (source: command line) 289s -mg_levels_ksp_type chebyshev # (source: command line) 289s -mg_levels_pc_type jacobi # (source: command line) 289s -options_left # (source: command line) 289s -pc_gamg_coarse_eq_limit 1000 # (source: command line) 289s -pc_type gamg # (source: command line) 289s #End of PETSc Option Table entries 289s Compiled without FORTRAN kernels 289s Compiled with full precision matrices (default) 289s sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 289s Configure options: --build=x86_64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --with-library-name-suffix=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi " --CXX_LINKER_FLAGS="-Wl,--no-as-needed -Wl,-z,defs" --CC_LINKER_FLAGS=-Wl,-z,defs --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real --PETSC_ARCH=x86_64-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" CXXFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" FCFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=3" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,--package-metadata=%7B%22type%22:%22deb%22%2C%22os%22:%22ubuntu%22%2C%22name%22:%22petsc%22%2C%22version%22:%223.24.3+dfsg1-1ubuntu1%22%2C%22architecture%22:%22amd64%22%7D -flto=auto -ffat-lto-objects -Wl,-z,relro -fPIC" MAKEFLAGS= 289s ----------------------------------------- 289s Libraries compiled on 2026-01-26 06:54:57 on reproducible 289s Machine characteristics: Linux-6.8.0-90-generic-x86_64-with-glibc2.42 289s Using PETSc directory: /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real 289s Using PETSc arch: 289s ----------------------------------------- 289s 289s Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -Wdate-time -D_FORTIFY_SOURCE=3 289s Using Fortran compiler: mpif90 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=3 289s ----------------------------------------- 289s 289s Using include paths: -I/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu-dist -I/usr/include/superlu -I/usr/include/scotch -I/usr/include/hdf5/openmpi 289s ----------------------------------------- 289s 289s Using C linker: mpicc 289s Using Fortran linker: mpif90 289s Using libraries: -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/gcc/x86_64-linux-gnu/15 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -lfftw3 -lfftw3_mpi -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu_dist -lsuperlu -llapack -lblas -lptesmumps -lptscotch -lscotch -lptscotcherr -lhdf5 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lm -lOpenCL -lyaml -lX11 -lstdc++ -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ 289s ----------------------------------------- 289s 289s #PETSc Option Table entries: 289s --ndofs 20000 # (source: command line) 289s --problem_type elasticity # (source: command line) 289s --scaling_type strong # (source: command line) 289s -ksp_rtol 1.0e-8 # (source: command line) 289s -ksp_type cg # (source: command line) 289s -ksp_view # (source: command line) 289s -log_view # (source: command line) 289s -matptap_via scalable # (source: command line) 289s -mg_levels_esteig_ksp_type cg # (source: command line) 289s -mg_levels_ksp_type chebyshev # (source: command line) 289s -mg_levels_pc_type jacobi # (source: command line) 289s -options_left # (source: command line) 289s -pc_gamg_coarse_eq_limit 1000 # (source: command line) 289s -pc_type gamg # (source: command line) 289s #End of PETSc Option Table entries 289s WARNING! There are options you set that were not used! 289s WARNING! could be spelling mistake, etc! 289s There are 4 unused database options. They are: 289s Option left: name:--ndofs value: 20000 source: command line 289s Option left: name:--problem_type value: elasticity source: command line 289s Option left: name:--scaling_type value: strong source: command line 289s Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line 289s ==== poisson weak scaling (2 processes with ndofs=10000) ==== 289s [2026-02-01 19:41:09.557] [RANK: 0] [info] Using partitioner with cell data (1 cell types) 289s [2026-02-01 19:41:09.558] [RANK: 0] [info] Compute partition of cells across ranks 289s [2026-02-01 19:41:09.558] [RANK: 0] [info] Building mesh dual graph 289s [2026-02-01 19:41:09.558] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 289s [2026-02-01 19:41:09.609] [RANK: 0] [info] Build nonlocal part of mesh dual graph 289s [2026-02-01 19:41:09.610] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 289s [2026-02-01 19:41:09.610] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 289s [2026-02-01 19:41:09.610] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 1, 1 289s [2026-02-01 19:41:09.612] [RANK: 0] [info] Graph edges (local: 208524, non-local: 1188) 289s [2026-02-01 19:41:09.612] [RANK: 0] [info] Compute graph partition using PT-SCOTCH 291s [2026-02-01 19:41:10.975] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 291s [2026-02-01 19:41:10.978] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 291s [2026-02-01 19:41:10.980] [RANK: 0] [info] Extract basic topology: 211660->211660 291s [2026-02-01 19:41:10.980] [RANK: 0] [info] Build local dual graphs, re-order cells, and compute process boundary vertices. 291s [2026-02-01 19:41:10.980] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 291s [2026-02-01 19:41:11.029] [RANK: 0] [info] GPS pseudo-diameter:(161) 157-50895 291s [2026-02-01 19:41:11.034] [RANK: 0] [info] Create topology (generalised) 291s [2026-02-01 19:41:11.038] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 291s [2026-02-01 19:41:11.039] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 291s [2026-02-01 19:41:11.053] [RANK: 0] [info] Compute ghost indices 291s [2026-02-01 19:41:11.053] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 291s [2026-02-01 19:41:11.055] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 291s [2026-02-01 19:41:11.059] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 291s [2026-02-01 19:41:11.060] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 291s [2026-02-01 19:41:11.076] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 291s [2026-02-01 19:41:11.077] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 291s [2026-02-01 19:41:11.077] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 291s [2026-02-01 19:41:11.077] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 291s [2026-02-01 19:41:11.080] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 291s [2026-02-01 19:41:11.080] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 291s [2026-02-01 19:41:11.080] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 291s [2026-02-01 19:41:11.081] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 291s [2026-02-01 19:41:11.081] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 291s [2026-02-01 19:41:11.081] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 1, 0.5 291s [2026-02-01 19:41:11.081] [RANK: 0] [info] Create Geometry (multiple) 291s [2026-02-01 19:41:11.081] [RANK: 0] [info] Got 1 dof layouts 291s [2026-02-01 19:41:11.081] [RANK: 0] [info] Checking required entities per dimension 291s [2026-02-01 19:41:11.081] [RANK: 0] [info] Cell type: 0 dofmap: 52915x4 291s [2026-02-01 19:41:11.085] [RANK: 0] [info] Global index computation 291s [2026-02-01 19:41:11.085] [RANK: 0] [info] Got 1 index_maps 291s [2026-02-01 19:41:11.086] [RANK: 0] [info] Get global indices 291s [2026-02-01 19:41:11.086] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 291s [2026-02-01 19:41:11.086] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 291s [2026-02-01 19:41:11.087] [RANK: 0] [info] Calling compute_local_to_global 291s [2026-02-01 19:41:11.087] [RANK: 0] [info] xdofs.size = 211660 291s [2026-02-01 19:41:11.087] [RANK: 0] [info] dofmap sizes = 211660 291s [2026-02-01 19:41:11.087] [RANK: 0] [info] all_dofmaps.size = 211660 291s [2026-02-01 19:41:11.087] [RANK: 0] [info] nodes.size = 10210 291s [2026-02-01 19:41:11.090] [RANK: 0] [info] Creating geometry with 1 dofmaps 291s UnitCube (27x22x30) to be refined 0 times 291s [2026-02-01 19:41:11.090] [RANK: 0] [info] Computing mesh entities of dimension 2 291s [2026-02-01 19:41:11.124] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 291s [2026-02-01 19:41:11.124] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 291s [2026-02-01 19:41:11.154] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 291s [2026-02-01 19:41:11.154] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 291s [2026-02-01 19:41:11.156] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 291s [2026-02-01 19:41:11.156] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. 291s [2026-02-01 19:41:11.157] [RANK: 0] [info] Checking required entities per dimension 291s [2026-02-01 19:41:11.157] [RANK: 0] [info] Cell type: 0 dofmap: 52915x4 291s [2026-02-01 19:41:11.161] [RANK: 0] [info] Global index computation 291s [2026-02-01 19:41:11.161] [RANK: 0] [info] Got 1 index_maps 291s [2026-02-01 19:41:11.162] [RANK: 0] [info] Get global indices 291s [2026-02-01 19:41:11.162] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 291s [2026-02-01 19:41:11.162] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 291s [2026-02-01 19:41:11.163] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) 291s [2026-02-01 19:41:11.177] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 291s [2026-02-01 19:41:11.177] [RANK: 0] [info] Requesting connectivity (3, 0) - (2, 0) 291s [2026-02-01 19:41:11.193] [RANK: 0] [info] Column ghost size increased from 331 to 898 291s ---------------------------------------------------------------- 291s Test problem summary 291s dolfinx version: 0.10.0 291s dolfinx hash: ubuntu 291s ufl hash: 58f3dc30e5e56245b795ae796fe6a103649e8345 291s petsc version: PETSc Release Version 3.24.3, Jan 01, 2026 291s Problem type: poisson 291s Scaling type: weak 291s Num processes: 2 291s Num cells: 106920 (107 thousand) 291s Total degrees of freedom: 19964 (20 thousand) 291s Average degrees of freedom per process: 9982 291s ---------------------------------------------------------------- 291s [2026-02-01 19:41:11.232] [RANK: 0] [info] PETSc Krylov solver starting to solve system. 291s KSP Object: 2 MPI processes 291s type: cg 291s maximum iterations=10000, initial guess is zero 291s tolerances: relative=1e-08, absolute=1e-50, divergence=10000. 291s left preconditioning 291s using PRECONDITIONED norm type for convergence test 291s PC Object: 2 MPI processes 291s type: hypre 291s HYPRE BoomerAMG preconditioning 291s Cycle type V 291s Maximum number of levels 25 291s Maximum number of iterations PER hypre call 1 291s Convergence tolerance PER hypre call 0. 291s Threshold for strong coupling 0.5 291s Interpolation truncation factor 0. 291s Interpolation: max elements per row 0 291s Number of levels of aggressive coarsening 0 291s Number of paths for aggressive coarsening 1 291s Maximum row sums 0.9 291s Sweeps down 1 291s Sweeps up 1 291s Sweeps on coarse 1 291s Relax down symmetric-SOR/Jacobi 291s Relax up symmetric-SOR/Jacobi 291s Relax on coarse Gaussian-elimination 291s Relax weight (all) 1. 291s Outer relax weight (all) 1. 291s Maximum size of coarsest grid 9 291s Minimum size of coarsest grid 1 291s Using CF-relaxation 291s Not using more complex smoothers. 291s Measure type local 291s Coarsen type Falgout 291s Interpolation type classical 291s SpGEMM type hypre 291s linear system matrix = precond matrix: 291s Mat Object: 2 MPI processes 291s type: mpiaij 291s rows=19964, cols=19964 291s total: nonzeros=281986, allocated nonzeros=281986 291s total number of mallocs used during MatSetValues calls=0 291s not using I-node (on process 0) routines 291s 291s [MPI_MAX] Summary of timings (s) | reps avg tot 291s ------------------------------------------------------------------------------------------------------- 291s Build BoxMesh (tetrahedra) | 1 1.534579 1.534579 291s Build dofmap data | 2 0.005566 0.011132 291s Compute connectivity 2-0 | 1 0.000953 0.000953 291s Compute dof reordering map | 2 0.000406 0.000811 291s Compute entities of dim = 2 | 1 0.065915 0.065915 291s Compute graph partition (SCOTCH) | 1 1.356735 1.356735 291s Compute local part of mesh dual graph (mixed) | 2 0.049466 0.098932 291s Compute local-to-local map | 1 0.001428 0.001428 291s Compute non-local part of mesh dual graph | 1 0.004120 0.004120 291s Compute-local-to-global links for global/local adjacency list | 1 0.001167 0.001167 291s Distribute fixed-degree adjacency list to destination ranks | 1 0.011621 0.011621 291s Distribute row-wise data (scalable) | 1 0.000941 0.000941 291s GPS: create_level_structure | 2 0.000767 0.001535 291s Gibbs-Poole-Stockmeyer ordering | 1 0.005125 0.005125 291s Init MPI | 1 0.016447 0.016447 291s Init PETSc | 1 0.000510 0.000510 291s Init dofmap from element dofmap | 2 0.004232 0.008463 291s Init logging | 1 0.000005 0.000005 291s PETSc Krylov solver | 1 0.125632 0.125632 291s SparsityPattern::finalize | 1 0.011561 0.011561 291s Topology: create | 1 0.043427 0.043427 291s Topology: determine shared index ownership | 1 0.001574 0.001574 291s Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.003234 0.003234 291s ZZZ Assemble | 1 0.067502 0.067502 291s ZZZ Assemble matrix | 1 0.030666 0.030666 291s ZZZ Assemble vector | 1 0.005194 0.005194 291s ZZZ Create Mesh | 1 1.534672 1.534672 291s ZZZ Create RHS function | 1 0.013368 0.013368 291s ZZZ Create boundary conditions | 1 0.001313 0.001313 291s ZZZ Create facets and facet->cell connectivity | 1 0.066989 0.066989 291s ZZZ FunctionSpace | 1 0.005915 0.005915 291s ZZZ Solve | 1 0.127074 0.127074 291s *** Number of Krylov iterations: 6 291s *** Solution norm: 30.0262 291s **************************************************************************************************************************************************************** 291s *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** 291s **************************************************************************************************************************************************************** 291s 291s ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ 291s 291s ./dolfinx-scaling-test on a named autopkgtest with 2 processes, by ubuntu on Sun Feb 1 19:41:11 2026 291s Using PETSc Release Version 3.24.3, Jan 01, 2026 291s 291s Max Max/Min Avg Total 291s Time (sec): 1.803e+00 1.000 1.803e+00 291s Objects: 0.000e+00 0.000 0.000e+00 291s Flops: 3.126e+06 1.021 3.094e+06 6.187e+06 291s Flops/sec: 1.733e+06 1.021 1.716e+06 3.431e+06 291s MPI Msg Count: 1.400e+01 1.000 1.400e+01 2.800e+01 291s MPI Msg Len (bytes): 1.043e+05 1.000 7.448e+03 2.085e+05 291s MPI Reductions: 6.900e+01 1.000 291s 291s Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) 291s e.g., VecAXPY() for real vectors of length N --> 2N flops 291s and VecAXPY() for complex vectors of length N --> 8N flops 291s 291s Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- 291s Avg %Total Avg %Total Count %Total Avg %Total Count %Total 291s 0: Main Stage: 1.8032e+00 100.0% 6.1874e+06 100.0% 2.800e+01 100.0% 7.448e+03 100.0% 5.100e+01 73.9% 291s 291s ------------------------------------------------------------------------------------------------------------------------ 291s See the 'Profiling' chapter of the users' manual for details on interpreting output. 291s Phase summary info: 291s Count: number of times phase was executed 291s Time and Flop: Max - maximum over all processes 291s Ratio - ratio of maximum to minimum over all processes 291s Mess: number of messages sent 291s AvgLen: average message length (bytes) 291s Reduct: number of global reductions 291s Global: entire computation 291s Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). 291s %T - percent time in this phase %F - percent flop in this phase 291s %M - percent messages in this phase %L - percent message lengths in this phase 291s %R - percent reductions in this phase 291s Total Mflop/s: 1e-6 * (sum of flop over all processes)/(max time over all processes) 291s ------------------------------------------------------------------------------------------------------------------------ 291s Event Count Time (sec) Flop --- Global --- --- Stage ---- Total 291s Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s 291s ------------------------------------------------------------------------------------------------------------------------ 291s 291s --- Event Stage 0: Main Stage 291s 291s BuildTwoSided 5 1.0 7.2640e-05 1.2 0.00e+00 0.0 8.0e+00 4.0e+00 5.0e+00 0 0 29 0 7 0 0 29 0 10 0 291s BuildTwoSidedF 2 1.0 7.1889e-05 1.2 0.00e+00 0.0 4.0e+00 2.8e+04 2.0e+00 0 0 14 53 3 0 0 14 53 4 0 291s MatMult 6 1.0 1.1532e-03 1.0 1.65e+06 1.0 1.2e+01 7.1e+03 0.0e+00 0 53 43 41 0 0 53 43 41 0 2831 291s MatConvert 1 1.0 3.6135e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 291s MatAssemblyBegin 5 1.0 1.2812e-03 1.0 0.00e+00 0.0 4.0e+00 2.8e+04 2.0e+00 0 0 14 53 3 0 0 14 53 4 0 291s MatAssemblyEnd 5 1.0 2.5293e-03 1.1 2.20e+03 1.0 4.0e+00 1.8e+03 5.0e+00 0 0 14 3 7 0 0 14 3 10 2 291s MatGetRowIJ 4 1.0 1.0910e-06 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 291s MatView 1 1.0 1.4968e-04 4.4 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 291s MatSetPreallCOO 2 1.0 1.6374e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 291s MatSetValuesCOO 2 1.0 5.9684e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 291s VecTDot 14 1.0 2.6237e-04 1.1 2.82e+05 1.0 0.0e+00 0.0e+00 1.4e+01 0 9 0 0 20 0 9 0 0 27 2130 291s VecNorm 7 1.0 1.7213e-04 1.2 1.41e+05 1.0 0.0e+00 0.0e+00 7.0e+00 0 5 0 0 10 0 5 0 0 14 1624 291s VecCopy 2 1.0 1.5984e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 291s VecSet 8 1.0 2.1182e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 291s VecAXPY 12 1.0 6.7753e-05 1.0 2.42e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 7072 291s VecAYPX 5 1.0 4.0560e-05 1.1 1.01e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 4922 291s VecScatterBegin 6 1.0 6.2013e-05 1.0 0.00e+00 0.0 1.2e+01 7.1e+03 0.0e+00 0 0 43 41 0 0 0 43 41 0 0 291s VecScatterEnd 6 1.0 1.0061e-04 2.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 291s SFSetGraph 3 1.0 1.9499e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 291s SFSetUp 3 1.0 6.2694e-05 1.0 0.00e+00 0.0 1.2e+01 1.0e+03 3.0e+00 0 0 43 6 4 0 0 43 6 6 0 291s SFPack 6 1.0 1.3620e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 291s SFUnpack 6 1.0 1.0120e-06 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 291s KSPSetUp 1 1.0 1.9880e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 291s KSPSolve 1 1.0 3.8271e-02 1.0 2.42e+06 1.0 1.2e+01 7.1e+03 2.1e+01 2 77 43 41 30 2 77 43 41 41 125 291s PCSetUp 1 1.0 8.7094e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 5 0 0 0 3 5 0 0 0 4 0 291s PCApply 7 1.0 3.6550e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 2 0 0 0 0 2 0 0 0 0 0 291s ------------------------------------------------------------------------------------------------------------------------ 291s 291s Object Type Creations Destructions. Reports information only for process 0. 291s 291s --- Event Stage 0: Main Stage 291s 291s Container 2 2 291s Matrix 7 7 291s Index Set 6 6 291s IS L to G Mapping 1 1 291s Vector 12 12 291s Star Forest Graph 3 3 291s Krylov Solver 1 1 291s Preconditioner 1 1 291s Viewer 1 1 291s ======================================================================================================================== 291s Average time to get PetscTime(): 5.81e-08 291s Average time for MPI_Barrier(): 2.1632e-06 291s Average time for zero size MPI_Send(): 3.5755e-06 291s #PETSc Option Table entries: 291s --ndofs 10000 # (source: command line) 291s --problem_type poisson # (source: command line) 291s --scaling_type weak # (source: command line) 291s -ksp_rtol 1.0e-8 # (source: command line) 291s -ksp_type cg # (source: command line) 291s -ksp_view # (source: command line) 291s -log_view # (source: command line) 291s -options_left # (source: command line) 291s -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) 291s -pc_hypre_type boomeramg # (source: command line) 291s -pc_type hypre # (source: command line) 291s #End of PETSc Option Table entries 291s Compiled without FORTRAN kernels 291s Compiled with full precision matrices (default) 291s sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 291s Configure options: --build=x86_64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --with-library-name-suffix=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi " --CXX_LINKER_FLAGS="-Wl,--no-as-needed -Wl,-z,defs" --CC_LINKER_FLAGS=-Wl,-z,defs --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real --PETSC_ARCH=x86_64-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" CXXFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" FCFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=3" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,--package-metadata=%7B%22type%22:%22deb%22%2C%22os%22:%22ubuntu%22%2C%22name%22:%22petsc%22%2C%22version%22:%223.24.3+dfsg1-1ubuntu1%22%2C%22architecture%22:%22amd64%22%7D -flto=auto -ffat-lto-objects -Wl,-z,relro -fPIC" MAKEFLAGS= 291s ----------------------------------------- 291s Libraries compiled on 2026-01-26 06:54:57 on reproducible 291s Machine characteristics: Linux-6.8.0-90-generic-x86_64-with-glibc2.42 291s Using PETSc directory: /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real 291s Using PETSc arch: 291s ----------------------------------------- 291s 291s Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -Wdate-time -D_FORTIFY_SOURCE=3 291s Using Fortran compiler: mpif90 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=3 291s ----------------------------------------- 291s 291s Using include paths: -I/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu-dist -I/usr/include/superlu -I/usr/include/scotch -I/usr/include/hdf5/openmpi 291s ----------------------------------------- 291s 291s Using C linker: mpicc 291s Using Fortran linker: mpif90 291s Using libraries: -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/gcc/x86_64-linux-gnu/15 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -lfftw3 -lfftw3_mpi -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu_dist -lsuperlu -llapack -lblas -lptesmumps -lptscotch -lscotch -lptscotcherr -lhdf5 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lm -lOpenCL -lyaml -lX11 -lstdc++ -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ 291s ----------------------------------------- 291s 291s #PETSc Option Table entries: 291s --ndofs 10000 # (source: command line) 291s --problem_type poisson # (source: command line) 291s --scaling_type weak # (source: command line) 291s -ksp_rtol 1.0e-8 # (source: command line) 291s -ksp_type cg # (source: command line) 291s -ksp_view # (source: command line) 291s -log_view # (source: command line) 291s -options_left # (source: command line) 291s -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) 291s -pc_hypre_type boomeramg # (source: command line) 291s -pc_type hypre # (source: command line) 291s #End of PETSc Option Table entries 291s WARNING! There are options you set that were not used! 291s WARNING! could be spelling mistake, etc! 291s There are 3 unused database options. They are: 291s Option left: name:--ndofs value: 10000 source: command line 291s Option left: name:--problem_type value: poisson source: command line 291s Option left: name:--scaling_type value: weak source: command line 291s ==== poisson strong scaling (2 processes with ndofs=20000) ==== 291s [2026-02-01 19:41:11.624] [RANK: 0] [info] Using partitioner with cell data (1 cell types) 291s [2026-02-01 19:41:11.625] [RANK: 0] [info] Compute partition of cells across ranks 291s [2026-02-01 19:41:11.625] [RANK: 0] [info] Building mesh dual graph 291s [2026-02-01 19:41:11.625] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 292s [2026-02-01 19:41:11.676] [RANK: 0] [info] Build nonlocal part of mesh dual graph 292s [2026-02-01 19:41:11.676] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 292s [2026-02-01 19:41:11.677] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 292s [2026-02-01 19:41:11.677] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 1, 1 292s [2026-02-01 19:41:11.679] [RANK: 0] [info] Graph edges (local: 208524, non-local: 1188) 292s [2026-02-01 19:41:11.679] [RANK: 0] [info] Compute graph partition using PT-SCOTCH 293s [2026-02-01 19:41:13.039] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 293s [2026-02-01 19:41:13.043] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 293s [2026-02-01 19:41:13.063] [RANK: 0] [info] Extract basic topology: 213252->213252 293s [2026-02-01 19:41:13.063] [RANK: 0] [info] Build local dual graphs, re-order cells, and compute process boundary vertices. 293s [2026-02-01 19:41:13.063] [RANK: 0] [info] Build local part of mesh dual graph (mixed) 293s [2026-02-01 19:41:13.134] [RANK: 0] [info] GPS pseudo-diameter:(158) 157-46456 293s [2026-02-01 19:41:13.139] [RANK: 0] [info] Create topology (generalised) 293s [2026-02-01 19:41:13.142] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 293s [2026-02-01 19:41:13.142] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 293s [2026-02-01 19:41:13.157] [RANK: 0] [info] Compute ghost indices 293s [2026-02-01 19:41:13.157] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 293s [2026-02-01 19:41:13.157] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 293s [2026-02-01 19:41:13.162] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 293s [2026-02-01 19:41:13.162] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 293s [2026-02-01 19:41:13.178] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 293s [2026-02-01 19:41:13.178] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 293s [2026-02-01 19:41:13.178] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 293s [2026-02-01 19:41:13.179] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 293s [2026-02-01 19:41:13.181] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 293s [2026-02-01 19:41:13.181] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 293s [2026-02-01 19:41:13.181] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 293s [2026-02-01 19:41:13.182] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 293s [2026-02-01 19:41:13.182] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 293s [2026-02-01 19:41:13.182] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 1, 0.5 293s [2026-02-01 19:41:13.182] [RANK: 0] [info] Create Geometry (multiple) 293s [2026-02-01 19:41:13.182] [RANK: 0] [info] Got 1 dof layouts 293s [2026-02-01 19:41:13.182] [RANK: 0] [info] Checking required entities per dimension 293s [2026-02-01 19:41:13.182] [RANK: 0] [info] Cell type: 0 dofmap: 53313x4 293s [2026-02-01 19:41:13.186] [RANK: 0] [info] Global index computation 293s [2026-02-01 19:41:13.186] [RANK: 0] [info] Got 1 index_maps 293s [2026-02-01 19:41:13.187] [RANK: 0] [info] Get global indices 293s [2026-02-01 19:41:13.187] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 293s [2026-02-01 19:41:13.187] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 293s [2026-02-01 19:41:13.188] [RANK: 0] [info] Calling compute_local_to_global 293s [2026-02-01 19:41:13.188] [RANK: 0] [info] xdofs.size = 213252 293s [2026-02-01 19:41:13.188] [RANK: 0] [info] dofmap sizes = 213252 293s [2026-02-01 19:41:13.188] [RANK: 0] [info] all_dofmaps.size = 213252 293s [2026-02-01 19:41:13.188] [RANK: 0] [info] nodes.size = 10277 293s [2026-02-01 19:41:13.190] [RANK: 0] [info] Creating geometry with 1 dofmaps 293s UnitCube (27x22x30) to be refined 0 times 293s [2026-02-01 19:41:13.191] [RANK: 0] [info] Computing mesh entities of dimension 2 293s [2026-02-01 19:41:13.224] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 293s [2026-02-01 19:41:13.225] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 293s [2026-02-01 19:41:13.254] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 293s [2026-02-01 19:41:13.255] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 293s [2026-02-01 19:41:13.257] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 293s [2026-02-01 19:41:13.257] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. 293s [2026-02-01 19:41:13.258] [RANK: 0] [info] Checking required entities per dimension 293s [2026-02-01 19:41:13.258] [RANK: 0] [info] Cell type: 0 dofmap: 53313x4 293s [2026-02-01 19:41:13.261] [RANK: 0] [info] Global index computation 293s [2026-02-01 19:41:13.262] [RANK: 0] [info] Got 1 index_maps 293s [2026-02-01 19:41:13.262] [RANK: 0] [info] Get global indices 293s [2026-02-01 19:41:13.262] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 1 293s [2026-02-01 19:41:13.262] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 1 293s [2026-02-01 19:41:13.263] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) 293s [2026-02-01 19:41:13.277] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) 293s [2026-02-01 19:41:13.277] [RANK: 0] [info] Requesting connectivity (3, 0) - (2, 0) 293s [2026-02-01 19:41:13.293] [RANK: 0] [info] Column ghost size increased from 327 to 857 293s ---------------------------------------------------------------- 293s Test problem summary 293s dolfinx version: 0.10.0 293s dolfinx hash: ubuntu 293s ufl hash: 58f3dc30e5e56245b795ae796fe6a103649e8345 293s petsc version: PETSc Release Version 3.24.3, Jan 01, 2026 293s Problem type: poisson 293s Scaling type: strong 293s Num processes: 2 293s Num cells: 106920 (107 thousand) 293s Total degrees of freedom: 19964 (20 thousand) 293s Average degrees of freedom per process: 9982 293s ---------------------------------------------------------------- 293s [2026-02-01 19:41:13.331] [RANK: 0] [info] PETSc Krylov solver starting to solve system. 293s KSP Object: 2 MPI processes 293s type: cg 293s maximum iterations=10000, initial guess is zero 293s tolerances: relative=1e-08, absolute=1e-50, divergence=10000. 293s left preconditioning 293s using PRECONDITIONED norm type for convergence test 293s PC Object: 2 MPI processes 293s type: hypre 293s HYPRE BoomerAMG preconditioning 293s Cycle type V 293s Maximum number of levels 25 293s Maximum number of iterations PER hypre call 1 293s Convergence tolerance PER hypre call 0. 293s Threshold for strong coupling 0.5 293s Interpolation truncation factor 0. 293s Interpolation: max elements per row 0 293s Number of levels of aggressive coarsening 0 293s Number of paths for aggressive coarsening 1 293s Maximum row sums 0.9 293s Sweeps down 1 293s Sweeps up 1 293s Sweeps on coarse 1 293s Relax down symmetric-SOR/Jacobi 293s Relax up symmetric-SOR/Jacobi 293s Relax on coarse Gaussian-elimination 293s Relax weight (all) 1. 293s Outer relax weight (all) 1. 293s Maximum size of coarsest grid 9 293s Minimum size of coarsest grid 1 293s Using CF-relaxation 293s Not using more complex smoothers. 293s Measure type local 293s Coarsen type Falgout 293s Interpolation type classical 293s SpGEMM type hypre 293s linear system matrix = precond matrix: 293s Mat Object: 2 MPI processes 293s type: mpiaij 293s rows=19964, cols=19964 293s total: nonzeros=281986, allocated nonzeros=281986 293s total number of mallocs used during MatSetValues calls=0 293s not using I-node (on process 0) routines 293s 293s [MPI_MAX] Summary of timings (s) | reps avg tot 293s ------------------------------------------------------------------------------------------------------- 293s Build BoxMesh (tetrahedra) | 1 1.567960 1.567960 293s Build dofmap data | 2 0.005219 0.010438 293s Compute connectivity 2-0 | 1 0.000955 0.000955 293s Compute dof reordering map | 2 0.000387 0.000775 293s Compute entities of dim = 2 | 1 0.065920 0.065920 293s Compute graph partition (SCOTCH) | 1 1.352920 1.352920 293s Compute local part of mesh dual graph (mixed) | 2 0.060319 0.120638 293s Compute local-to-local map | 1 0.001571 0.001571 293s Compute non-local part of mesh dual graph | 1 0.003250 0.003250 293s Compute-local-to-global links for global/local adjacency list | 1 0.001046 0.001046 293s Distribute fixed-degree adjacency list to destination ranks | 1 0.030401 0.030401 293s Distribute row-wise data (scalable) | 1 0.000972 0.000972 293s GPS: create_level_structure | 3 0.000651 0.001953 293s Gibbs-Poole-Stockmeyer ordering | 1 0.005338 0.005338 293s Init MPI | 1 0.016548 0.016548 293s Init PETSc | 1 0.000531 0.000531 293s Init dofmap from element dofmap | 2 0.004172 0.008345 293s Init logging | 1 0.000005 0.000005 293s PETSc Krylov solver | 1 0.124425 0.124425 293s SparsityPattern::finalize | 1 0.010600 0.010600 293s Topology: create | 1 0.041161 0.041161 293s Topology: determine shared index ownership | 1 0.001813 0.001813 293s Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.003144 0.003144 293s ZZZ Assemble | 1 0.066921 0.066921 293s ZZZ Assemble matrix | 1 0.030772 0.030772 293s ZZZ Assemble vector | 1 0.005283 0.005283 293s ZZZ Create Mesh | 1 1.568087 1.568087 293s ZZZ Create RHS function | 1 0.013571 0.013571 293s ZZZ Create boundary conditions | 1 0.001238 0.001238 293s ZZZ Create facets and facet->cell connectivity | 1 0.066880 0.066880 293s ZZZ FunctionSpace | 1 0.005404 0.005404 293s ZZZ Solve | 1 0.125947 0.125947 293s *** Number of Krylov iterations: 6 293s *** Solution norm: 30.0262 293s **************************************************************************************************************************************************************** 293s *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** 293s **************************************************************************************************************************************************************** 293s 293s ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ 293s 293s ./dolfinx-scaling-test on a named autopkgtest with 2 processes, by ubuntu on Sun Feb 1 19:41:13 2026 293s Using PETSc Release Version 3.24.3, Jan 01, 2026 293s 293s Max Max/Min Avg Total 293s Time (sec): 1.835e+00 1.000 1.835e+00 293s Objects: 0.000e+00 0.000 0.000e+00 293s Flops: 3.104e+06 1.006 3.094e+06 6.188e+06 293s Flops/sec: 1.692e+06 1.006 1.687e+06 3.373e+06 293s MPI Msg Count: 1.400e+01 1.000 1.400e+01 2.800e+01 293s MPI Msg Len (bytes): 1.014e+05 1.000 7.245e+03 2.028e+05 293s MPI Reductions: 6.900e+01 1.000 293s 293s Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) 293s e.g., VecAXPY() for real vectors of length N --> 2N flops 293s and VecAXPY() for complex vectors of length N --> 8N flops 293s 293s Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- 293s Avg %Total Avg %Total Count %Total Avg %Total Count %Total 293s 0: Main Stage: 1.8345e+00 100.0% 6.1884e+06 100.0% 2.800e+01 100.0% 7.245e+03 100.0% 5.100e+01 73.9% 293s 293s ------------------------------------------------------------------------------------------------------------------------ 293s See the 'Profiling' chapter of the users' manual for details on interpreting output. 293s Phase summary info: 293s Count: number of times phase was executed 293s Time and Flop: Max - maximum over all processes 293s Ratio - ratio of maximum to minimum over all processes 293s Mess: number of messages sent 293s AvgLen: average message length (bytes) 293s Reduct: number of global reductions 293s Global: entire computation 293s Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). 293s %T - percent time in this phase %F - percent flop in this phase 293s %M - percent messages in this phase %L - percent message lengths in this phase 293s %R - percent reductions in this phase 293s Total Mflop/s: 1e-6 * (sum of flop over all processes)/(max time over all processes) 293s ------------------------------------------------------------------------------------------------------------------------ 293s Event Count Time (sec) Flop --- Global --- --- Stage ---- Total 293s Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s 293s ------------------------------------------------------------------------------------------------------------------------ 293s 293s --- Event Stage 0: Main Stage 293s 293s BuildTwoSided 5 1.0 5.1866e-04 6.8 0.00e+00 0.0 8.0e+00 4.0e+00 5.0e+00 0 0 29 0 7 0 0 29 0 10 0 293s BuildTwoSidedF 2 1.0 5.1700e-04 14.3 0.00e+00 0.0 4.0e+00 2.7e+04 2.0e+00 0 0 14 53 3 0 0 14 53 4 0 293s MatMult 6 1.0 1.1193e-03 1.0 1.64e+06 1.0 1.2e+01 6.9e+03 0.0e+00 0 53 43 41 0 0 53 43 41 0 2916 293s MatConvert 1 1.0 3.1097e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 293s MatAssemblyBegin 5 1.0 1.6678e-03 1.4 0.00e+00 0.0 4.0e+00 2.7e+04 2.0e+00 0 0 14 53 3 0 0 14 53 4 0 293s MatAssemblyEnd 5 1.0 2.3518e-03 1.1 2.19e+03 1.0 4.0e+00 1.7e+03 5.0e+00 0 0 14 3 7 0 0 14 3 10 2 293s MatGetRowIJ 4 1.0 1.1020e-06 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 293s MatView 1 1.0 1.7328e-03 5.4 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 293s MatSetPreallCOO 2 1.0 1.1152e-03 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 293s MatSetValuesCOO 2 1.0 6.0795e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 293s VecTDot 14 1.0 3.2318e-04 1.1 2.80e+05 1.0 0.0e+00 0.0e+00 1.4e+01 0 9 0 0 20 0 9 0 0 27 1730 293s VecNorm 7 1.0 4.2878e-04 2.9 1.40e+05 1.0 0.0e+00 0.0e+00 7.0e+00 0 5 0 0 10 0 5 0 0 14 652 293s VecCopy 2 1.0 1.5793e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 293s VecSet 8 1.0 2.1674e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 293s VecAXPY 12 1.0 7.2649e-05 1.0 2.40e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 6595 293s VecAYPX 5 1.0 3.9510e-05 1.1 1.00e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 5053 293s VecScatterBegin 6 1.0 5.8858e-05 1.2 0.00e+00 0.0 1.2e+01 6.9e+03 0.0e+00 0 0 43 41 0 0 0 43 41 0 0 293s VecScatterEnd 6 1.0 9.5585e-05 1.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 293s SFSetGraph 3 1.0 1.8648e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 293s SFSetUp 3 1.0 1.0179e-04 1.6 0.00e+00 0.0 1.2e+01 1.0e+03 3.0e+00 0 0 43 6 4 0 0 43 6 6 0 293s SFPack 6 1.0 1.5405e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 293s SFUnpack 6 1.0 1.0550e-06 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 293s KSPSetUp 1 1.0 2.0241e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 293s KSPSolve 1 1.0 3.8701e-02 1.0 2.40e+06 1.0 1.2e+01 6.9e+03 2.1e+01 2 77 43 41 30 2 77 43 41 41 124 293s PCSetUp 1 1.0 8.3930e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 5 0 0 0 3 5 0 0 0 4 0 293s PCApply 7 1.0 3.6962e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 2 0 0 0 0 2 0 0 0 0 0 293s ------------------------------------------------------------------------------------------------------------------------ 293s 293s Object Type Creations Destructions. Reports information only for process 0. 293s 293s --- Event Stage 0: Main Stage 293s 293s Container 2 2 293s Matrix 7 7 293s Index Set 6 6 293s IS L to G Mapping 1 1 293s Vector 12 12 293s Star Forest Graph 3 3 293s Krylov Solver 1 1 293s Preconditioner 1 1 293s Viewer 1 1 293s ======================================================================================================================== 293s Average time to get PetscTime(): 5.91e-08 293s Average time for MPI_Barrier(): 3.426e-07 293s Average time for zero size MPI_Send(): 3.0545e-06 293s #PETSc Option Table entries: 293s --ndofs 20000 # (source: command line) 293s --problem_type poisson # (source: command line) 293s --scaling_type strong # (source: command line) 293s -ksp_rtol 1.0e-8 # (source: command line) 293s -ksp_type cg # (source: command line) 293s -ksp_view # (source: command line) 293s -log_view # (source: command line) 293s -options_left # (source: command line) 293s -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) 293s -pc_hypre_type boomeramg # (source: command line) 293s -pc_type hypre # (source: command line) 293s #End of PETSc Option Table entries 293s Compiled without FORTRAN kernels 293s Compiled with full precision matrices (default) 293s sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 293s Configure options: --build=x86_64-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --with-library-name-suffix=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -lhdf5 -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi " --CXX_LINKER_FLAGS="-Wl,--no-as-needed -Wl,-z,defs" --CC_LINKER_FLAGS=-Wl,-z,defs --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real --PETSC_ARCH=x86_64-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" CXXFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC" FCFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=3" LDFLAGS="-Wl,-Bsymbolic-functions -Wl,--package-metadata=%7B%22type%22:%22deb%22%2C%22os%22:%22ubuntu%22%2C%22name%22:%22petsc%22%2C%22version%22:%223.24.3+dfsg1-1ubuntu1%22%2C%22architecture%22:%22amd64%22%7D -flto=auto -ffat-lto-objects -Wl,-z,relro -fPIC" MAKEFLAGS= 293s ----------------------------------------- 293s Libraries compiled on 2026-01-26 06:54:57 on reproducible 293s Machine characteristics: Linux-6.8.0-90-generic-x86_64-with-glibc2.42 293s Using PETSc directory: /usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real 293s Using PETSc arch: 293s ----------------------------------------- 293s 293s Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -Wdate-time -D_FORTIFY_SOURCE=3 293s Using Fortran compiler: mpif90 -g -O2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -ffile-prefix-map=/build/petsc-j4WqgR/petsc-3.24.3+dfsg1=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -fcf-protection -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=3 293s ----------------------------------------- 293s 293s Using include paths: -I/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu-dist -I/usr/include/superlu -I/usr/include/scotch -I/usr/include/hdf5/openmpi 293s ----------------------------------------- 293s 293s Using C linker: mpicc 293s Using Fortran linker: mpif90 293s Using libraries: -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.24/x86_64-linux-gnu-real/lib -lpetsc_real -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/gcc/x86_64-linux-gnu/15 -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -lfftw3 -lfftw3_mpi -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu_dist -lsuperlu -llapack -lblas -lptesmumps -lptscotch -lscotch -lptscotcherr -lhdf5 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lm -lOpenCL -lyaml -lX11 -lstdc++ -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ 293s ----------------------------------------- 293s 293s #PETSc Option Table entries: 293s --ndofs 20000 # (source: command line) 293s --problem_type poisson # (source: command line) 293s --scaling_type strong # (source: command line) 293s -ksp_rtol 1.0e-8 # (source: command line) 293s -ksp_type cg # (source: command line) 293s -ksp_view # (source: command line) 293s -log_view # (source: command line) 293s -options_left # (source: command line) 293s -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) 293s -pc_hypre_type boomeramg # (source: command line) 293s -pc_type hypre # (source: command line) 293s #End of PETSc Option Table entries 293s WARNING! There are options you set that were not used! 293s WARNING! could be spelling mistake, etc! 293s There are 3 unused database options. They are: 293s Option left: name:--ndofs value: 20000 source: command line 293s Option left: name:--problem_type value: poisson source: command line 293s Option left: name:--scaling_type value: strong source: command line 294s autopkgtest [19:41:14]: test dolfinx-performance-test-source: -----------------------] 294s autopkgtest [19:41:14]: test dolfinx-performance-test-source: - - - - - - - - - - results - - - - - - - - - - 294s dolfinx-performance-test-source PASS 294s autopkgtest [19:41:14]: @@@@@@@@@@@@@@@@@@@@ summary 294s dolfinx-performance-test-binary PASS 294s dolfinx-performance-test-source PASS