0s autopkgtest [20:25:06]: starting date and time: 2025-10-18 20:25:06+0000 0s autopkgtest [20:25:06]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [20:25:06]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.w3q0t3m7/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults --apt-upgrade fast5 --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python3-defaults/3.13.7-2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-amd64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@sto01-10.secgroup --name adt-resolute-amd64-fast5-20251018-202506-juju-7f2275-prod-proposed-migration-environment-2-91d1f109-e492-49f6-b6a5-609bf842726d --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-autopkgtest-workers-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 3s Creating nova instance adt-resolute-amd64-fast5-20251018-202506-juju-7f2275-prod-proposed-migration-environment-2-91d1f109-e492-49f6-b6a5-609bf842726d from image adt/ubuntu-resolute-amd64-server-20251018.img (UUID dd697a48-b6cc-4a02-84bf-0f9f2fad5f89)... 27s autopkgtest [20:25:33]: testbed dpkg architecture: amd64 27s autopkgtest [20:25:33]: testbed apt version: 3.1.6ubuntu2 27s autopkgtest [20:25:33]: @@@@@@@@@@@@@@@@@@@@ test bed setup 27s autopkgtest [20:25:33]: testbed release detected to be: None 28s autopkgtest [20:25:34]: updating testbed package index (apt update) 28s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [83.3 kB] 28s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 28s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 28s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 28s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5028 B] 28s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [456 kB] 29s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [50.7 kB] 29s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [16.7 kB] 29s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [104 kB] 29s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [59.9 kB] 29s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted i386 Packages [3208 B] 29s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 Packages [28.0 kB] 29s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [331 kB] 29s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [113 kB] 29s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [3088 B] 29s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [9188 B] 29s Fetched 1262 kB in 1s (2280 kB/s) 29s Reading package lists... 30s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 30s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 30s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 30s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 31s Reading package lists... 31s Reading package lists... 31s Building dependency tree... 31s Reading state information... 31s Calculating upgrade... 31s The following packages will be upgraded: 31s apt gir1.2-girepository-2.0 libapt-pkg7.0 libgirepository-1.0-1 31s libpython3-stdlib python3 python3-minimal 31s 7 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 31s Need to get 2751 kB of archives. 31s After this operation, 2048 B of additional disk space will be used. 31s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-minimal amd64 3.13.7-2 [27.8 kB] 31s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3 amd64 3.13.7-2 [23.9 kB] 31s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libpython3-stdlib amd64 3.13.7-2 [10.6 kB] 31s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 libapt-pkg7.0 amd64 3.1.8ubuntu1 [1140 kB] 31s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 apt amd64 3.1.8ubuntu1 [1438 kB] 31s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libgirepository-1.0-1 amd64 1.86.0-6 [85.9 kB] 31s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-girepository-2.0 amd64 1.86.0-6 [25.3 kB] 31s dpkg-preconfigure: unable to re-open stdin: No such file or directory 31s Fetched 2751 kB in 0s (8418 kB/s) 32s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78439 files and directories currently installed.) 32s Preparing to unpack .../python3-minimal_3.13.7-2_amd64.deb ... 32s Unpacking python3-minimal (3.13.7-2) over (3.13.7-1) ... 32s Setting up python3-minimal (3.13.7-2) ... 32s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78439 files and directories currently installed.) 32s Preparing to unpack .../0-python3_3.13.7-2_amd64.deb ... 32s running python pre-rtupdate hooks for python3.13... 32s Unpacking python3 (3.13.7-2) over (3.13.7-1) ... 32s Preparing to unpack .../1-libpython3-stdlib_3.13.7-2_amd64.deb ... 32s Unpacking libpython3-stdlib:amd64 (3.13.7-2) over (3.13.7-1) ... 32s Preparing to unpack .../2-libapt-pkg7.0_3.1.8ubuntu1_amd64.deb ... 32s Unpacking libapt-pkg7.0:amd64 (3.1.8ubuntu1) over (3.1.6ubuntu2) ... 32s Preparing to unpack .../3-apt_3.1.8ubuntu1_amd64.deb ... 32s Unpacking apt (3.1.8ubuntu1) over (3.1.6ubuntu2) ... 32s Preparing to unpack .../4-libgirepository-1.0-1_1.86.0-6_amd64.deb ... 32s Unpacking libgirepository-1.0-1:amd64 (1.86.0-6) over (1.84.0-1) ... 32s Preparing to unpack .../5-gir1.2-girepository-2.0_1.86.0-6_amd64.deb ... 32s Unpacking gir1.2-girepository-2.0:amd64 (1.86.0-6) over (1.84.0-1) ... 32s Setting up libgirepository-1.0-1:amd64 (1.86.0-6) ... 32s Setting up libapt-pkg7.0:amd64 (3.1.8ubuntu1) ... 32s Setting up libpython3-stdlib:amd64 (3.13.7-2) ... 32s Setting up apt (3.1.8ubuntu1) ... 32s Setting up python3 (3.13.7-2) ... 33s running python rtupdate hooks for python3.13... 33s running python post-rtupdate hooks for python3.13... 33s Setting up gir1.2-girepository-2.0:amd64 (1.86.0-6) ... 33s Processing triggers for man-db (2.13.1-1) ... 34s Processing triggers for libc-bin (2.42-0ubuntu3) ... 34s autopkgtest [20:25:40]: upgrading testbed (apt dist-upgrade and autopurge) 34s Reading package lists... 35s Building dependency tree... 35s Reading state information... 35s Calculating upgrade... 35s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 35s Reading package lists... 35s Building dependency tree... 35s Reading state information... 35s Solving dependencies... 35s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 35s autopkgtest [20:25:41]: rebooting testbed after setup commands that affected boot 51s autopkgtest [20:25:57]: testbed running kernel: Linux 6.17.0-5-generic #5-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 22 10:00:33 UTC 2025 53s autopkgtest [20:25:59]: @@@@@@@@@@@@@@@@@@@@ apt-source fast5 55s Get:1 http://ftpmaster.internal/ubuntu resolute/universe fast5 0.6.5-9build2 (dsc) [2223 B] 55s Get:2 http://ftpmaster.internal/ubuntu resolute/universe fast5 0.6.5-9build2 (tar) [93.6 kB] 55s Get:3 http://ftpmaster.internal/ubuntu resolute/universe fast5 0.6.5-9build2 (diff) [5948 B] 55s gpgv: Signature made Tue Mar 4 17:14:46 2025 UTC 55s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 55s gpgv: Can't check signature: No public key 55s dpkg-source: warning: cannot verify inline signature for ./fast5_0.6.5-9build2.dsc: no acceptable signature found 55s autopkgtest [20:26:01]: testing package fast5 version 0.6.5-9build2 55s autopkgtest [20:26:01]: build not needed 56s autopkgtest [20:26:02]: test command1: preparing testbed 56s Reading package lists... 56s Building dependency tree... 56s Reading state information... 56s Solving dependencies... 56s The following NEW packages will be installed: 56s build-essential comerr-dev cpp cpp-15 cpp-15-x86-64-linux-gnu 56s cpp-x86-64-linux-gnu g++ g++-15 g++-15-x86-64-linux-gnu g++-x86-64-linux-gnu 56s gcc gcc-15 gcc-15-x86-64-linux-gnu gcc-x86-64-linux-gnu hdf5-helpers 56s krb5-multidev libaec-dev libaec0 libasan8 libbrotli-dev libcc1-0 56s libcurl4-openssl-dev libevent-2.1-7t64 libfast5-dev libgcc-15-dev 56s libgfortran5 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64 56s libgnutls-openssl27t64 libgnutls28-dev libgomp1 libgssrpc4t64 libhdf5-310 56s libhdf5-cpp-310 libhdf5-dev libhdf5-fortran-310 libhdf5-hl-310 56s libhdf5-hl-cpp-310 libhdf5-hl-fortran-310 libhwasan0 libidn2-dev libisl23 56s libitm1 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 56s libkadm5clnt-mit12 libkadm5srv-mit12 libkdb5-10t64 libkrb5-dev libldap-dev 56s liblsan0 libmpc3 libnghttp2-dev libp11-kit-dev libpkgconf3 libpsl-dev 56s libquadmath0 librtmp-dev libssh2-1-dev libssl-dev libstdc++-15-dev libsz2 56s libtasn1-6-dev libtsan2 libubsan1 libunbound8 libzstd-dev nettle-dev pkgconf 56s pkgconf-bin zlib1g-dev 57s 0 upgraded, 75 newly installed, 0 to remove and 0 not upgraded. 57s Need to get 86.6 MB of archives. 57s After this operation, 306 MB of additional disk space will be used. 57s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 libisl23 amd64 0.27-1 [685 kB] 57s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 libmpc3 amd64 1.3.1-1build3 [57.0 kB] 57s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15-x86-64-linux-gnu amd64 15.2.0-5ubuntu1 [12.9 MB] 57s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-15 amd64 15.2.0-5ubuntu1 [1028 B] 57s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [5746 B] 57s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 cpp amd64 4:15.2.0-4ubuntu1 [22.4 kB] 57s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 libcc1-0 amd64 15.2.0-5ubuntu1 [47.4 kB] 57s Get:8 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 15.2.0-5ubuntu1 [151 kB] 57s Get:9 http://ftpmaster.internal/ubuntu resolute/main amd64 libitm1 amd64 15.2.0-5ubuntu1 [29.3 kB] 57s Get:10 http://ftpmaster.internal/ubuntu resolute/main amd64 libasan8 amd64 15.2.0-5ubuntu1 [3071 kB] 57s Get:11 http://ftpmaster.internal/ubuntu resolute/main amd64 liblsan0 amd64 15.2.0-5ubuntu1 [1360 kB] 57s Get:12 http://ftpmaster.internal/ubuntu resolute/main amd64 libtsan2 amd64 15.2.0-5ubuntu1 [2757 kB] 57s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libubsan1 amd64 15.2.0-5ubuntu1 [1210 kB] 57s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 libhwasan0 amd64 15.2.0-5ubuntu1 [1685 kB] 57s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libquadmath0 amd64 15.2.0-5ubuntu1 [153 kB] 57s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 libgcc-15-dev amd64 15.2.0-5ubuntu1 [2863 kB] 57s Get:17 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15-x86-64-linux-gnu amd64 15.2.0-5ubuntu1 [25.4 MB] 58s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-15 amd64 15.2.0-5ubuntu1 [523 kB] 58s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [1208 B] 58s Get:20 http://ftpmaster.internal/ubuntu resolute/main amd64 gcc amd64 4:15.2.0-4ubuntu1 [5024 B] 58s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libstdc++-15-dev amd64 15.2.0-5ubuntu1 [2573 kB] 58s Get:22 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15-x86-64-linux-gnu amd64 15.2.0-5ubuntu1 [14.4 MB] 59s Get:23 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-15 amd64 15.2.0-5ubuntu1 [23.7 kB] 59s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 g++-x86-64-linux-gnu amd64 4:15.2.0-4ubuntu1 [966 B] 59s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 g++ amd64 4:15.2.0-4ubuntu1 [1100 B] 59s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 build-essential amd64 12.12ubuntu1 [5080 B] 59s Get:27 http://ftpmaster.internal/ubuntu resolute/universe amd64 hdf5-helpers amd64 1.14.5+repack-3build1 [17.1 kB] 59s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 comerr-dev amd64 2.1-1.47.2-3ubuntu2 [45.0 kB] 59s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libgssrpc4t64 amd64 1.21.3-5ubuntu2 [58.0 kB] 59s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 libkadm5clnt-mit12 amd64 1.21.3-5ubuntu2 [40.0 kB] 59s Get:31 http://ftpmaster.internal/ubuntu resolute/main amd64 libkdb5-10t64 amd64 1.21.3-5ubuntu2 [41.3 kB] 59s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 libkadm5srv-mit12 amd64 1.21.3-5ubuntu2 [54.7 kB] 59s Get:33 http://ftpmaster.internal/ubuntu resolute/main amd64 krb5-multidev amd64 1.21.3-5ubuntu2 [125 kB] 59s Get:34 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 59s Get:35 http://ftpmaster.internal/ubuntu resolute/main amd64 libbrotli-dev amd64 1.1.0-2build5 [358 kB] 59s Get:36 http://ftpmaster.internal/ubuntu resolute/main amd64 libidn2-dev amd64 2.3.8-4 [123 kB] 59s Get:37 http://ftpmaster.internal/ubuntu resolute/main amd64 libkrb5-dev amd64 1.21.3-5ubuntu2 [11.9 kB] 59s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libldap-dev amd64 2.6.10+dfsg-1ubuntu2 [328 kB] 59s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 libpkgconf3 amd64 1.8.1-4build1 [32.8 kB] 59s Get:40 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf-bin amd64 1.8.1-4build1 [21.7 kB] 59s Get:41 http://ftpmaster.internal/ubuntu resolute/main amd64 pkgconf amd64 1.8.1-4build1 [16.8 kB] 59s Get:42 http://ftpmaster.internal/ubuntu resolute/main amd64 libnghttp2-dev amd64 1.64.0-1.1ubuntu1 [120 kB] 59s Get:43 http://ftpmaster.internal/ubuntu resolute/main amd64 libpsl-dev amd64 0.21.2-1.1build1 [76.4 kB] 59s Get:44 http://ftpmaster.internal/ubuntu resolute/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-5ubuntu1 [9956 B] 59s Get:45 http://ftpmaster.internal/ubuntu resolute/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-5ubuntu1 [342 kB] 59s Get:46 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10build1 [155 kB] 59s Get:47 http://ftpmaster.internal/ubuntu resolute/main amd64 libunbound8 amd64 1.22.0-2ubuntu2 [468 kB] 59s Get:48 http://ftpmaster.internal/ubuntu resolute/main amd64 libgnutls-dane0t64 amd64 3.8.9-3ubuntu2 [24.8 kB] 59s Get:49 http://ftpmaster.internal/ubuntu resolute/main amd64 libgnutls-openssl27t64 amd64 3.8.9-3ubuntu2 [25.4 kB] 59s Get:50 http://ftpmaster.internal/ubuntu resolute/main amd64 libp11-kit-dev amd64 0.25.5-3ubuntu1 [23.5 kB] 59s Get:51 http://ftpmaster.internal/ubuntu resolute/main amd64 libtasn1-6-dev amd64 4.20.0-2build1 [93.6 kB] 59s Get:52 http://ftpmaster.internal/ubuntu resolute/main amd64 nettle-dev amd64 3.10.1-1 [1187 kB] 59s Get:53 http://ftpmaster.internal/ubuntu resolute/main amd64 libgnutls28-dev amd64 3.8.9-3ubuntu2 [1119 kB] 59s Get:54 http://ftpmaster.internal/ubuntu resolute/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1ubuntu2 [898 kB] 59s Get:55 http://ftpmaster.internal/ubuntu resolute/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-2build8 [71.2 kB] 59s Get:56 http://ftpmaster.internal/ubuntu resolute/main amd64 libssl-dev amd64 3.5.3-1ubuntu2 [2936 kB] 59s Get:57 http://ftpmaster.internal/ubuntu resolute/main amd64 libssh2-1-dev amd64 1.11.1-1build1 [288 kB] 59s Get:58 http://ftpmaster.internal/ubuntu resolute/main amd64 libzstd-dev amd64 1.5.7+dfsg-1build2 [387 kB] 59s Get:59 http://ftpmaster.internal/ubuntu resolute/main amd64 libcurl4-openssl-dev amd64 8.14.1-2ubuntu1 [527 kB] 59s Get:60 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 59s Get:61 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-310 amd64 1.14.5+repack-3build1 [1411 kB] 59s Get:62 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 15.2.0-5ubuntu1 [939 kB] 59s Get:63 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-fortran-310 amd64 1.14.5+repack-3build1 [104 kB] 59s Get:64 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-310 amd64 1.14.5+repack-3build1 [59.8 kB] 59s Get:65 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-fortran-310 amd64 1.14.5+repack-3build1 [32.1 kB] 59s Get:66 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-cpp-310 amd64 1.14.5+repack-3build1 [122 kB] 59s Get:67 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-cpp-310 amd64 1.14.5+repack-3build1 [11.8 kB] 59s Get:68 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8 amd64 2.1.5-4ubuntu2 [152 kB] 59s Get:69 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-turbo8-dev amd64 2.1.5-4ubuntu2 [296 kB] 59s Get:70 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 59s Get:71 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg8-dev amd64 8c-2ubuntu11 [1484 B] 59s Get:72 http://ftpmaster.internal/ubuntu resolute/main amd64 libjpeg-dev amd64 8c-2ubuntu11 [1482 B] 59s Get:73 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec-dev amd64 1.1.3-1 [19.8 kB] 59s Get:74 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-dev amd64 1.14.5+repack-3build1 [3344 kB] 59s Get:75 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfast5-dev all 0.6.5-9build2 [50.5 kB] 59s Fetched 86.6 MB in 3s (33.2 MB/s) 59s Selecting previously unselected package libisl23:amd64. 59s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78439 files and directories currently installed.) 59s Preparing to unpack .../00-libisl23_0.27-1_amd64.deb ... 59s Unpacking libisl23:amd64 (0.27-1) ... 59s Selecting previously unselected package libmpc3:amd64. 59s Preparing to unpack .../01-libmpc3_1.3.1-1build3_amd64.deb ... 59s Unpacking libmpc3:amd64 (1.3.1-1build3) ... 59s Selecting previously unselected package cpp-15-x86-64-linux-gnu. 59s Preparing to unpack .../02-cpp-15-x86-64-linux-gnu_15.2.0-5ubuntu1_amd64.deb ... 59s Unpacking cpp-15-x86-64-linux-gnu (15.2.0-5ubuntu1) ... 60s Selecting previously unselected package cpp-15. 60s Preparing to unpack .../03-cpp-15_15.2.0-5ubuntu1_amd64.deb ... 60s Unpacking cpp-15 (15.2.0-5ubuntu1) ... 60s Selecting previously unselected package cpp-x86-64-linux-gnu. 60s Preparing to unpack .../04-cpp-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 60s Unpacking cpp-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 60s Selecting previously unselected package cpp. 60s Preparing to unpack .../05-cpp_4%3a15.2.0-4ubuntu1_amd64.deb ... 60s Unpacking cpp (4:15.2.0-4ubuntu1) ... 60s Selecting previously unselected package libcc1-0:amd64. 60s Preparing to unpack .../06-libcc1-0_15.2.0-5ubuntu1_amd64.deb ... 60s Unpacking libcc1-0:amd64 (15.2.0-5ubuntu1) ... 60s Selecting previously unselected package libgomp1:amd64. 60s Preparing to unpack .../07-libgomp1_15.2.0-5ubuntu1_amd64.deb ... 60s Unpacking libgomp1:amd64 (15.2.0-5ubuntu1) ... 60s Selecting previously unselected package libitm1:amd64. 60s Preparing to unpack .../08-libitm1_15.2.0-5ubuntu1_amd64.deb ... 60s Unpacking libitm1:amd64 (15.2.0-5ubuntu1) ... 60s Selecting previously unselected package libasan8:amd64. 60s Preparing to unpack .../09-libasan8_15.2.0-5ubuntu1_amd64.deb ... 60s Unpacking libasan8:amd64 (15.2.0-5ubuntu1) ... 60s Selecting previously unselected package liblsan0:amd64. 60s Preparing to unpack .../10-liblsan0_15.2.0-5ubuntu1_amd64.deb ... 60s Unpacking liblsan0:amd64 (15.2.0-5ubuntu1) ... 60s Selecting previously unselected package libtsan2:amd64. 60s Preparing to unpack .../11-libtsan2_15.2.0-5ubuntu1_amd64.deb ... 60s Unpacking libtsan2:amd64 (15.2.0-5ubuntu1) ... 60s Selecting previously unselected package libubsan1:amd64. 60s Preparing to unpack .../12-libubsan1_15.2.0-5ubuntu1_amd64.deb ... 60s Unpacking libubsan1:amd64 (15.2.0-5ubuntu1) ... 60s Selecting previously unselected package libhwasan0:amd64. 60s 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.../18-gcc-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 60s Unpacking gcc-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 60s Selecting previously unselected package gcc. 60s Preparing to unpack .../19-gcc_4%3a15.2.0-4ubuntu1_amd64.deb ... 60s Unpacking gcc (4:15.2.0-4ubuntu1) ... 60s Selecting previously unselected package libstdc++-15-dev:amd64. 60s Preparing to unpack .../20-libstdc++-15-dev_15.2.0-5ubuntu1_amd64.deb ... 60s Unpacking libstdc++-15-dev:amd64 (15.2.0-5ubuntu1) ... 60s Selecting previously unselected package g++-15-x86-64-linux-gnu. 60s Preparing to unpack .../21-g++-15-x86-64-linux-gnu_15.2.0-5ubuntu1_amd64.deb ... 60s Unpacking g++-15-x86-64-linux-gnu (15.2.0-5ubuntu1) ... 60s Selecting previously unselected package g++-15. 60s Preparing to unpack .../22-g++-15_15.2.0-5ubuntu1_amd64.deb ... 60s Unpacking g++-15 (15.2.0-5ubuntu1) ... 60s Selecting previously unselected package g++-x86-64-linux-gnu. 60s Preparing to unpack .../23-g++-x86-64-linux-gnu_4%3a15.2.0-4ubuntu1_amd64.deb ... 60s Unpacking g++-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 60s Selecting previously unselected package g++. 60s Preparing to unpack .../24-g++_4%3a15.2.0-4ubuntu1_amd64.deb ... 60s Unpacking g++ (4:15.2.0-4ubuntu1) ... 60s Selecting previously unselected package build-essential. 60s Preparing to unpack .../25-build-essential_12.12ubuntu1_amd64.deb ... 60s Unpacking build-essential (12.12ubuntu1) ... 60s Selecting previously unselected package hdf5-helpers. 60s Preparing to unpack .../26-hdf5-helpers_1.14.5+repack-3build1_amd64.deb ... 60s Unpacking hdf5-helpers (1.14.5+repack-3build1) ... 60s Selecting previously unselected package comerr-dev:amd64. 60s Preparing to unpack .../27-comerr-dev_2.1-1.47.2-3ubuntu2_amd64.deb ... 60s Unpacking comerr-dev:amd64 (2.1-1.47.2-3ubuntu2) ... 60s Selecting previously unselected package libgssrpc4t64:amd64. 60s Preparing to unpack .../28-libgssrpc4t64_1.21.3-5ubuntu2_amd64.deb ... 60s Unpacking libgssrpc4t64:amd64 (1.21.3-5ubuntu2) ... 60s Selecting previously unselected package libkadm5clnt-mit12:amd64. 60s Preparing to unpack .../29-libkadm5clnt-mit12_1.21.3-5ubuntu2_amd64.deb ... 60s Unpacking libkadm5clnt-mit12:amd64 (1.21.3-5ubuntu2) ... 60s Selecting previously unselected package libkdb5-10t64:amd64. 61s Preparing to unpack .../30-libkdb5-10t64_1.21.3-5ubuntu2_amd64.deb ... 61s Unpacking libkdb5-10t64:amd64 (1.21.3-5ubuntu2) ... 61s Selecting previously unselected package libkadm5srv-mit12:amd64. 61s Preparing to unpack .../31-libkadm5srv-mit12_1.21.3-5ubuntu2_amd64.deb ... 61s Unpacking libkadm5srv-mit12:amd64 (1.21.3-5ubuntu2) ... 61s Selecting previously unselected package krb5-multidev:amd64. 61s Preparing to unpack .../32-krb5-multidev_1.21.3-5ubuntu2_amd64.deb ... 61s Unpacking krb5-multidev:amd64 (1.21.3-5ubuntu2) ... 61s Selecting previously unselected package libaec0:amd64. 61s Preparing to unpack .../33-libaec0_1.1.3-1_amd64.deb ... 61s Unpacking libaec0:amd64 (1.1.3-1) ... 61s Selecting previously unselected package libbrotli-dev:amd64. 61s Preparing to unpack .../34-libbrotli-dev_1.1.0-2build5_amd64.deb ... 61s Unpacking libbrotli-dev:amd64 (1.1.0-2build5) ... 61s Selecting previously unselected package libidn2-dev:amd64. 61s Preparing to unpack .../35-libidn2-dev_2.3.8-4_amd64.deb ... 61s Unpacking libidn2-dev:amd64 (2.3.8-4) ... 61s Selecting previously unselected package libkrb5-dev:amd64. 61s Preparing to unpack .../36-libkrb5-dev_1.21.3-5ubuntu2_amd64.deb ... 61s Unpacking libkrb5-dev:amd64 (1.21.3-5ubuntu2) ... 61s Selecting previously unselected package libldap-dev:amd64. 61s Preparing to unpack .../37-libldap-dev_2.6.10+dfsg-1ubuntu2_amd64.deb ... 61s Unpacking libldap-dev:amd64 (2.6.10+dfsg-1ubuntu2) ... 61s Selecting previously unselected package libpkgconf3:amd64. 61s Preparing to unpack .../38-libpkgconf3_1.8.1-4build1_amd64.deb ... 61s Unpacking libpkgconf3:amd64 (1.8.1-4build1) ... 61s Selecting previously unselected package pkgconf-bin. 61s Preparing to unpack .../39-pkgconf-bin_1.8.1-4build1_amd64.deb ... 61s Unpacking pkgconf-bin (1.8.1-4build1) ... 61s Selecting previously unselected package pkgconf:amd64. 61s Preparing to unpack .../40-pkgconf_1.8.1-4build1_amd64.deb ... 61s Unpacking pkgconf:amd64 (1.8.1-4build1) ... 61s Selecting previously unselected package libnghttp2-dev:amd64. 61s Preparing to unpack .../41-libnghttp2-dev_1.64.0-1.1ubuntu1_amd64.deb ... 61s Unpacking libnghttp2-dev:amd64 (1.64.0-1.1ubuntu1) ... 61s Selecting previously unselected package libpsl-dev:amd64. 61s Preparing to unpack .../42-libpsl-dev_0.21.2-1.1build1_amd64.deb ... 61s Unpacking libpsl-dev:amd64 (0.21.2-1.1build1) ... 61s Selecting previously unselected package libgmpxx4ldbl:amd64. 61s Preparing to unpack .../43-libgmpxx4ldbl_2%3a6.3.0+dfsg-5ubuntu1_amd64.deb ... 61s Unpacking libgmpxx4ldbl:amd64 (2:6.3.0+dfsg-5ubuntu1) ... 61s Selecting previously unselected package libgmp-dev:amd64. 61s Preparing to unpack .../44-libgmp-dev_2%3a6.3.0+dfsg-5ubuntu1_amd64.deb ... 61s Unpacking libgmp-dev:amd64 (2:6.3.0+dfsg-5ubuntu1) ... 61s Selecting previously unselected package libevent-2.1-7t64:amd64. 61s Preparing to unpack .../45-libevent-2.1-7t64_2.1.12-stable-10build1_amd64.deb ... 61s Unpacking libevent-2.1-7t64:amd64 (2.1.12-stable-10build1) ... 61s Selecting previously unselected package libunbound8:amd64. 61s Preparing to unpack .../46-libunbound8_1.22.0-2ubuntu2_amd64.deb ... 61s Unpacking libunbound8:amd64 (1.22.0-2ubuntu2) ... 61s Selecting previously unselected package libgnutls-dane0t64:amd64. 61s Preparing to unpack .../47-libgnutls-dane0t64_3.8.9-3ubuntu2_amd64.deb ... 61s Unpacking libgnutls-dane0t64:amd64 (3.8.9-3ubuntu2) ... 61s Selecting previously unselected package libgnutls-openssl27t64:amd64. 61s Preparing to unpack .../48-libgnutls-openssl27t64_3.8.9-3ubuntu2_amd64.deb ... 61s Unpacking libgnutls-openssl27t64:amd64 (3.8.9-3ubuntu2) ... 61s Selecting previously unselected package libp11-kit-dev:amd64. 61s Preparing to unpack .../49-libp11-kit-dev_0.25.5-3ubuntu1_amd64.deb ... 61s Unpacking libp11-kit-dev:amd64 (0.25.5-3ubuntu1) ... 61s Selecting previously unselected package libtasn1-6-dev:amd64. 61s Preparing to unpack .../50-libtasn1-6-dev_4.20.0-2build1_amd64.deb ... 61s Unpacking libtasn1-6-dev:amd64 (4.20.0-2build1) ... 61s Selecting previously unselected package nettle-dev:amd64. 61s Preparing to unpack .../51-nettle-dev_3.10.1-1_amd64.deb ... 61s Unpacking nettle-dev:amd64 (3.10.1-1) ... 61s Selecting previously unselected package libgnutls28-dev:amd64. 61s Preparing to unpack .../52-libgnutls28-dev_3.8.9-3ubuntu2_amd64.deb ... 61s Unpacking libgnutls28-dev:amd64 (3.8.9-3ubuntu2) ... 61s Selecting previously unselected package zlib1g-dev:amd64. 61s Preparing to unpack .../53-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu2_amd64.deb ... 61s Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 61s Selecting previously unselected package librtmp-dev:amd64. 61s Preparing to unpack .../54-librtmp-dev_2.4+20151223.gitfa8646d.1-2build8_amd64.deb ... 61s Unpacking librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-2build8) ... 61s Selecting previously unselected package libssl-dev:amd64. 61s Preparing to unpack .../55-libssl-dev_3.5.3-1ubuntu2_amd64.deb ... 61s Unpacking libssl-dev:amd64 (3.5.3-1ubuntu2) ... 61s Selecting previously unselected package libssh2-1-dev:amd64. 61s Preparing to unpack .../56-libssh2-1-dev_1.11.1-1build1_amd64.deb ... 61s Unpacking libssh2-1-dev:amd64 (1.11.1-1build1) ... 61s Selecting previously unselected package libzstd-dev:amd64. 61s Preparing to unpack .../57-libzstd-dev_1.5.7+dfsg-1build2_amd64.deb ... 61s Unpacking libzstd-dev:amd64 (1.5.7+dfsg-1build2) ... 61s Selecting previously unselected package libcurl4-openssl-dev:amd64. 61s Preparing to unpack .../58-libcurl4-openssl-dev_8.14.1-2ubuntu1_amd64.deb ... 61s Unpacking libcurl4-openssl-dev:amd64 (8.14.1-2ubuntu1) ... 61s Selecting previously unselected package libsz2:amd64. 61s Preparing to unpack .../59-libsz2_1.1.3-1_amd64.deb ... 61s Unpacking libsz2:amd64 (1.1.3-1) ... 61s Selecting previously unselected package libhdf5-310:amd64. 61s Preparing to unpack .../60-libhdf5-310_1.14.5+repack-3build1_amd64.deb ... 61s Unpacking libhdf5-310:amd64 (1.14.5+repack-3build1) ... 61s Selecting previously unselected package libgfortran5:amd64. 61s Preparing to unpack .../61-libgfortran5_15.2.0-5ubuntu1_amd64.deb ... 61s Unpacking libgfortran5:amd64 (15.2.0-5ubuntu1) ... 61s Selecting previously unselected package libhdf5-fortran-310:amd64. 61s Preparing to unpack .../62-libhdf5-fortran-310_1.14.5+repack-3build1_amd64.deb ... 61s Unpacking libhdf5-fortran-310:amd64 (1.14.5+repack-3build1) ... 61s Selecting previously unselected package libhdf5-hl-310:amd64. 61s Preparing to unpack .../63-libhdf5-hl-310_1.14.5+repack-3build1_amd64.deb ... 61s Unpacking libhdf5-hl-310:amd64 (1.14.5+repack-3build1) ... 61s Selecting previously unselected package libhdf5-hl-fortran-310:amd64. 61s Preparing to unpack .../64-libhdf5-hl-fortran-310_1.14.5+repack-3build1_amd64.deb ... 61s Unpacking libhdf5-hl-fortran-310:amd64 (1.14.5+repack-3build1) ... 61s Selecting previously unselected package libhdf5-cpp-310:amd64. 61s Preparing to unpack .../65-libhdf5-cpp-310_1.14.5+repack-3build1_amd64.deb ... 61s Unpacking libhdf5-cpp-310:amd64 (1.14.5+repack-3build1) ... 61s Selecting previously unselected package libhdf5-hl-cpp-310:amd64. 61s Preparing to unpack .../66-libhdf5-hl-cpp-310_1.14.5+repack-3build1_amd64.deb ... 61s Unpacking libhdf5-hl-cpp-310:amd64 (1.14.5+repack-3build1) ... 61s Selecting previously unselected package libjpeg-turbo8:amd64. 61s Preparing to unpack .../67-libjpeg-turbo8_2.1.5-4ubuntu2_amd64.deb ... 61s Unpacking libjpeg-turbo8:amd64 (2.1.5-4ubuntu2) ... 61s Selecting previously unselected package libjpeg-turbo8-dev:amd64. 61s Preparing to unpack .../68-libjpeg-turbo8-dev_2.1.5-4ubuntu2_amd64.deb 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unselected package libfast5-dev. 61s Preparing to unpack .../74-libfast5-dev_0.6.5-9build2_all.deb ... 61s Unpacking libfast5-dev (0.6.5-9build2) ... 61s Setting up libgnutls-openssl27t64:amd64 (3.8.9-3ubuntu2) ... 61s Setting up libzstd-dev:amd64 (1.5.7+dfsg-1build2) ... 61s Setting up hdf5-helpers (1.14.5+repack-3build1) ... 61s Setting up libevent-2.1-7t64:amd64 (2.1.12-stable-10build1) ... 61s Setting up libgomp1:amd64 (15.2.0-5ubuntu1) ... 61s Setting up libaec0:amd64 (1.1.3-1) ... 61s Setting up libpsl-dev:amd64 (0.21.2-1.1build1) ... 61s Setting up libunbound8:amd64 (1.22.0-2ubuntu2) ... 61s Setting up libpkgconf3:amd64 (1.8.1-4build1) ... 61s Setting up libgmpxx4ldbl:amd64 (2:6.3.0+dfsg-5ubuntu1) ... 61s Setting up libgnutls-dane0t64:amd64 (3.8.9-3ubuntu2) ... 61s Setting up libgssrpc4t64:amd64 (1.21.3-5ubuntu2) ... 61s Setting up libldap-dev:amd64 (2.6.10+dfsg-1ubuntu2) ... 61s Setting up libquadmath0:amd64 (15.2.0-5ubuntu1) ... 61s Setting up comerr-dev:amd64 (2.1-1.47.2-3ubuntu2) ... 61s Setting up libssl-dev:amd64 (3.5.3-1ubuntu2) ... 61s Setting up libmpc3:amd64 (1.3.1-1build3) ... 61s Setting up pkgconf-bin (1.8.1-4build1) ... 61s Setting up libjpeg-turbo8:amd64 (2.1.5-4ubuntu2) ... 61s Setting up libidn2-dev:amd64 (2.3.8-4) ... 61s Setting up libgfortran5:amd64 (15.2.0-5ubuntu1) ... 61s Setting up libubsan1:amd64 (15.2.0-5ubuntu1) ... 61s Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1ubuntu2) ... 61s Setting up libhwasan0:amd64 (15.2.0-5ubuntu1) ... 61s Setting up libasan8:amd64 (15.2.0-5ubuntu1) ... 61s Setting up libtsan2:amd64 (15.2.0-5ubuntu1) ... 61s Setting up libisl23:amd64 (0.27-1) ... 61s Setting up libtasn1-6-dev:amd64 (4.20.0-2build1) ... 61s Setting up libcc1-0:amd64 (15.2.0-5ubuntu1) ... 61s Setting up libbrotli-dev:amd64 (1.1.0-2build5) ... 61s Setting up liblsan0:amd64 (15.2.0-5ubuntu1) ... 61s Setting up libp11-kit-dev:amd64 (0.25.5-3ubuntu1) ... 61s Setting up libsz2:amd64 (1.1.3-1) ... 61s Setting up libitm1:amd64 (15.2.0-5ubuntu1) ... 61s Setting up libkadm5clnt-mit12:amd64 (1.21.3-5ubuntu2) ... 61s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 61s Setting up libjpeg-turbo8-dev:amd64 (2.1.5-4ubuntu2) ... 61s Setting up libgcc-15-dev:amd64 (15.2.0-5ubuntu1) ... 61s Setting up libgmp-dev:amd64 (2:6.3.0+dfsg-5ubuntu1) ... 61s Setting up nettle-dev:amd64 (3.10.1-1) ... 61s Setting up libkdb5-10t64:amd64 (1.21.3-5ubuntu2) ... 61s Setting up libaec-dev:amd64 (1.1.3-1) ... 61s Setting up cpp-15-x86-64-linux-gnu (15.2.0-5ubuntu1) ... 61s Setting up pkgconf:amd64 (1.8.1-4build1) ... 61s Setting up gcc-15-x86-64-linux-gnu (15.2.0-5ubuntu1) ... 61s Setting up libstdc++-15-dev:amd64 (15.2.0-5ubuntu1) ... 61s Setting up libssh2-1-dev:amd64 (1.11.1-1build1) ... 61s Setting up libhdf5-310:amd64 (1.14.5+repack-3build1) ... 61s Setting up cpp-15 (15.2.0-5ubuntu1) ... 61s Setting up libkadm5srv-mit12:amd64 (1.21.3-5ubuntu2) ... 61s Setting up libjpeg8-dev:amd64 (8c-2ubuntu11) ... 61s Setting up libhdf5-fortran-310:amd64 (1.14.5+repack-3build1) ... 61s Setting up krb5-multidev:amd64 (1.21.3-5ubuntu2) ... 61s Setting up libhdf5-cpp-310:amd64 (1.14.5+repack-3build1) ... 61s Setting up cpp-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 61s Setting up libgnutls28-dev:amd64 (3.8.9-3ubuntu2) ... 61s Setting up libnghttp2-dev:amd64 (1.64.0-1.1ubuntu1) ... 61s Setting up libhdf5-hl-310:amd64 (1.14.5+repack-3build1) ... 61s Setting up g++-15-x86-64-linux-gnu (15.2.0-5ubuntu1) ... 61s Setting up gcc-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 61s Setting up libjpeg-dev:amd64 (8c-2ubuntu11) ... 61s Setting up libkrb5-dev:amd64 (1.21.3-5ubuntu2) ... 61s Setting up gcc-15 (15.2.0-5ubuntu1) ... 61s Setting up librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-2build8) ... 61s Setting up cpp (4:15.2.0-4ubuntu1) ... 61s Setting up g++-x86-64-linux-gnu (4:15.2.0-4ubuntu1) ... 61s Setting up g++-15 (15.2.0-5ubuntu1) ... 61s Setting up libhdf5-hl-cpp-310:amd64 (1.14.5+repack-3build1) ... 61s Setting up libhdf5-hl-fortran-310:amd64 (1.14.5+repack-3build1) ... 61s Setting up gcc (4:15.2.0-4ubuntu1) ... 61s Setting up libcurl4-openssl-dev:amd64 (8.14.1-2ubuntu1) ... 61s Setting up libhdf5-dev (1.14.5+repack-3build1) ... 61s update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 61s Setting up g++ (4:15.2.0-4ubuntu1) ... 61s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 61s Setting up build-essential (12.12ubuntu1) ... 61s Setting up libfast5-dev (0.6.5-9build2) ... 61s Processing triggers for libc-bin (2.42-0ubuntu3) ... 61s Processing triggers for man-db (2.13.1-1) ... 62s Processing triggers for install-info (7.1.1-1ubuntu1) ... 63s autopkgtest [20:26:09]: test command1: cp /usr/share/doc/libfast5-dev/examples/* $AUTOPKGTEST_TMP && cd $AUTOPKGTEST_TMP && make FAST5_DIR=/usr/include HDF5_INCLUDE_DIR=/usr/include/hdf5/serial HDF5_LIB_DIR=/usr/lib/$(gcc -print-multiarch)/hdf5/serial 63s autopkgtest [20:26:09]: test command1: [----------------------- 63s g++ -std=c++11 -O0 -g3 -ggdb -fno-eliminate-unused-debug-types -Wall -Wextra -Wpedantic -isystem /usr/include/hdf5/serial -I /usr/include -DH5_USE_110_API -o f5ls f5ls.cpp -L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,--rpath=/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -lpthread -lz -ldl 67s g++ -std=c++11 -O0 -g3 -ggdb -fno-eliminate-unused-debug-types -Wall -Wextra -Wpedantic -isystem /usr/include/hdf5/serial -I /usr/include -DH5_USE_110_API -o f5ls-full f5ls-full.cpp -L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,--rpath=/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -lpthread -lz -ldl 71s g++ -std=c++11 -O0 -g3 -ggdb -fno-eliminate-unused-debug-types -Wall -Wextra -Wpedantic -isystem /usr/include/hdf5/serial -I /usr/include -DH5_USE_110_API -o hdf5-mod hdf5-mod.cpp -L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,--rpath=/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -lpthread -lz -ldl 74s g++ -std=c++11 -O0 -g3 -ggdb -fno-eliminate-unused-debug-types -Wall -Wextra -Wpedantic -isystem /usr/include/hdf5/serial -I /usr/include -DH5_USE_110_API -o f5-mod f5-mod.cpp -L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,--rpath=/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -lpthread -lz -ldl 77s autopkgtest [20:26:23]: test command1: -----------------------] 77s autopkgtest [20:26:23]: test command1: - - - - - - - - - - results - - - - - - - - - - 77s command1 PASS 78s autopkgtest [20:26:24]: test command2: preparing testbed 97s Creating nova instance adt-resolute-amd64-fast5-20251018-202506-juju-7f2275-prod-proposed-migration-environment-2-91d1f109-e492-49f6-b6a5-609bf842726d from image adt/ubuntu-resolute-amd64-server-20251018.img (UUID dd697a48-b6cc-4a02-84bf-0f9f2fad5f89)... 122s autopkgtest [20:27:08]: testbed dpkg architecture: amd64 122s autopkgtest [20:27:08]: testbed apt version: 3.1.6ubuntu2 123s autopkgtest [20:27:09]: @@@@@@@@@@@@@@@@@@@@ test bed setup 123s autopkgtest [20:27:09]: testbed release detected to be: resolute 124s autopkgtest [20:27:10]: updating testbed package index (apt update) 124s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [83.3 kB] 124s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 124s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 124s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 124s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [18.2 kB] 124s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [5028 B] 124s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [54.3 kB] 124s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [431 kB] 124s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [108 kB] 124s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [65.5 kB] 124s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/restricted i386 Packages [3208 B] 124s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 Packages [28.0 kB] 124s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [125 kB] 125s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [319 kB] 125s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [9188 B] 125s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [3088 B] 125s Fetched 1253 kB in 1s (1157 kB/s) 125s Reading package lists... 126s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 126s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 126s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 126s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 126s Reading package lists... 126s Reading package lists... 127s Building dependency tree... 127s Reading state information... 127s Calculating upgrade... 127s The following packages will be upgraded: 127s apt gir1.2-girepository-2.0 libapt-pkg7.0 libgirepository-1.0-1 127s libpython3-stdlib python3 python3-minimal 127s 7 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 127s Need to get 2751 kB of archives. 127s After this operation, 2048 B of additional disk space will be used. 127s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-minimal amd64 3.13.7-2 [27.8 kB] 127s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3 amd64 3.13.7-2 [23.9 kB] 127s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libpython3-stdlib amd64 3.13.7-2 [10.6 kB] 127s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 libapt-pkg7.0 amd64 3.1.8ubuntu1 [1140 kB] 127s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 apt amd64 3.1.8ubuntu1 [1438 kB] 127s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libgirepository-1.0-1 amd64 1.86.0-6 [85.9 kB] 127s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 gir1.2-girepository-2.0 amd64 1.86.0-6 [25.3 kB] 127s dpkg-preconfigure: unable to re-open stdin: No such file or directory 127s Fetched 2751 kB in 0s (6893 kB/s) 128s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78439 files and directories currently installed.) 128s Preparing to unpack .../python3-minimal_3.13.7-2_amd64.deb ... 128s Unpacking python3-minimal (3.13.7-2) over (3.13.7-1) ... 128s Setting up python3-minimal (3.13.7-2) ... 128s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78439 files and directories currently installed.) 128s Preparing to unpack .../0-python3_3.13.7-2_amd64.deb ... 128s running python pre-rtupdate hooks for python3.13... 128s Unpacking python3 (3.13.7-2) over (3.13.7-1) ... 128s Preparing to unpack .../1-libpython3-stdlib_3.13.7-2_amd64.deb ... 128s Unpacking libpython3-stdlib:amd64 (3.13.7-2) over (3.13.7-1) ... 128s Preparing to unpack .../2-libapt-pkg7.0_3.1.8ubuntu1_amd64.deb ... 128s Unpacking libapt-pkg7.0:amd64 (3.1.8ubuntu1) over (3.1.6ubuntu2) ... 128s Preparing to unpack .../3-apt_3.1.8ubuntu1_amd64.deb ... 128s Unpacking apt (3.1.8ubuntu1) over (3.1.6ubuntu2) ... 128s Preparing to unpack .../4-libgirepository-1.0-1_1.86.0-6_amd64.deb ... 128s Unpacking libgirepository-1.0-1:amd64 (1.86.0-6) over (1.84.0-1) ... 128s Preparing to unpack .../5-gir1.2-girepository-2.0_1.86.0-6_amd64.deb ... 128s Unpacking gir1.2-girepository-2.0:amd64 (1.86.0-6) over (1.84.0-1) ... 128s Setting up libgirepository-1.0-1:amd64 (1.86.0-6) ... 128s Setting up libapt-pkg7.0:amd64 (3.1.8ubuntu1) ... 128s Setting up libpython3-stdlib:amd64 (3.13.7-2) ... 128s Setting up apt (3.1.8ubuntu1) ... 128s Setting up python3 (3.13.7-2) ... 128s running python rtupdate hooks for python3.13... 128s running python post-rtupdate hooks for python3.13... 129s Setting up gir1.2-girepository-2.0:amd64 (1.86.0-6) ... 129s Processing triggers for man-db (2.13.1-1) ... 130s Processing triggers for libc-bin (2.42-0ubuntu3) ... 130s autopkgtest [20:27:16]: upgrading testbed (apt dist-upgrade and autopurge) 130s Reading package lists... 130s Building dependency tree... 130s Reading state information... 131s Calculating upgrade... 131s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 131s Reading package lists... 131s Building dependency tree... 131s Reading state information... 131s Solving dependencies... 131s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 131s autopkgtest [20:27:17]: rebooting testbed after setup commands that affected boot 149s Reading package lists... 149s Building dependency tree... 149s Reading state information... 149s Solving dependencies... 149s The following NEW packages will be installed: 149s libaec0 libhdf5-310 libsz2 python3-fast5 149s 0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. 149s Need to get 1728 kB of archives. 149s After this operation, 5299 kB of additional disk space will be used. 149s Get:1 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 149s Get:2 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 149s Get:3 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-310 amd64 1.14.5+repack-3build1 [1411 kB] 149s Get:4 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-fast5 amd64 0.6.5-9build2 [288 kB] 150s Fetched 1728 kB in 0s (6179 kB/s) 150s Selecting previously unselected package libaec0:amd64. 150s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78439 files and directories currently installed.) 150s Preparing to unpack .../libaec0_1.1.3-1_amd64.deb ... 150s Unpacking libaec0:amd64 (1.1.3-1) ... 150s Selecting previously unselected package libsz2:amd64. 150s Preparing to unpack .../libsz2_1.1.3-1_amd64.deb ... 150s Unpacking libsz2:amd64 (1.1.3-1) ... 150s Selecting previously unselected package libhdf5-310:amd64. 150s Preparing to unpack .../libhdf5-310_1.14.5+repack-3build1_amd64.deb ... 150s Unpacking libhdf5-310:amd64 (1.14.5+repack-3build1) ... 150s Selecting previously unselected package python3-fast5:amd64. 150s Preparing to unpack .../python3-fast5_0.6.5-9build2_amd64.deb ... 150s Unpacking python3-fast5:amd64 (0.6.5-9build2) ... 150s Setting up libaec0:amd64 (1.1.3-1) ... 150s Setting up libsz2:amd64 (1.1.3-1) ... 150s Setting up libhdf5-310:amd64 (1.14.5+repack-3build1) ... 150s Setting up python3-fast5:amd64 (0.6.5-9build2) ... 150s Processing triggers for libc-bin (2.42-0ubuntu3) ... 151s autopkgtest [20:27:37]: test command2: python3 -c "import fast5" 151s autopkgtest [20:27:37]: test command2: [----------------------- 152s autopkgtest [20:27:38]: test command2: -----------------------] 152s command2 PASS 152s autopkgtest [20:27:38]: test command2: - - - - - - - - - - results - - - - - - - - - - 152s autopkgtest [20:27:38]: @@@@@@@@@@@@@@@@@@@@ summary 152s command1 PASS 152s command2 PASS