0s autopkgtest [11:50:10]: starting date and time: 2025-11-17 11:50:10+0000 0s autopkgtest [11:50:10]: git checkout: 4b346b80 nova: make wait_reboot return success even when a no-op 0s autopkgtest [11:50:10]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.wk109ero/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3-defaults --apt-upgrade bitshuffle --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python3-defaults/3.13.7-2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-5.secgroup --name adt-resolute-amd64-bitshuffle-20251117-115010-juju-7f2275-prod-proposed-migration-environment-2-3774fc11-da61-44df-a9d4-c500e8b67426 --image adt/ubuntu-resolute-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 4s Creating nova instance adt-resolute-amd64-bitshuffle-20251117-115010-juju-7f2275-prod-proposed-migration-environment-2-3774fc11-da61-44df-a9d4-c500e8b67426 from image adt/ubuntu-resolute-amd64-server-20251117.img (UUID 47cb9b95-dcf3-40f8-972d-d06b1b09ded2)... 54s autopkgtest [11:51:04]: testbed dpkg architecture: amd64 54s autopkgtest [11:51:04]: testbed apt version: 3.1.11 54s autopkgtest [11:51:04]: @@@@@@@@@@@@@@@@@@@@ test bed setup 55s autopkgtest [11:51:05]: testbed release detected to be: None 55s autopkgtest [11:51:05]: updating testbed package index (apt update) 56s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [87.8 kB] 56s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 56s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 56s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 56s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [22.9 kB] 56s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [9848 B] 56s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [81.1 kB] 57s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [868 kB] 57s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [159 kB] 57s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [118 kB] 57s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [3096 B] 57s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 Packages [64.6 kB] 57s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/restricted i386 Packages [3744 B] 57s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [336 B] 57s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [607 kB] 57s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [279 kB] 57s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [21.2 kB] 57s Get:18 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [6516 B] 57s Get:19 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [13.4 kB] 57s Get:20 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [680 B] 60s Fetched 2346 kB in 1s (1595 kB/s) 60s Reading package lists... 61s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 61s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 61s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 61s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 62s Reading package lists... 62s Reading package lists... 62s Building dependency tree... 62s Reading state information... 62s Calculating upgrade... 62s The following packages will be upgraded: 62s libpython3-stdlib python3 python3-minimal usbutils 62s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 62s Need to get 146 kB of archives. 62s After this operation, 0 B of additional disk space will be used. 62s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-minimal amd64 3.13.7-2 [27.8 kB] 63s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3 amd64 3.13.7-2 [23.9 kB] 63s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libpython3-stdlib amd64 3.13.7-2 [10.6 kB] 63s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 usbutils amd64 1:019-1 [83.9 kB] 63s dpkg-preconfigure: unable to re-open stdin: No such file or directory 63s Fetched 146 kB in 0s (331 kB/s) 63s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83372 files and directories currently installed.) 63s Preparing to unpack .../python3-minimal_3.13.7-2_amd64.deb ... 63s Unpacking python3-minimal (3.13.7-2) over (3.13.7-1) ... 63s Setting up python3-minimal (3.13.7-2) ... 63s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83372 files and directories currently installed.) 63s Preparing to unpack .../python3_3.13.7-2_amd64.deb ... 63s running python pre-rtupdate hooks for python3.13... 63s Unpacking python3 (3.13.7-2) over (3.13.7-1) ... 64s Preparing to unpack .../libpython3-stdlib_3.13.7-2_amd64.deb ... 64s Unpacking libpython3-stdlib:amd64 (3.13.7-2) over (3.13.7-1) ... 64s Preparing to unpack .../usbutils_1%3a019-1_amd64.deb ... 64s Unpacking usbutils (1:019-1) over (1:018-2) ... 64s Setting up usbutils (1:019-1) ... 64s Setting up libpython3-stdlib:amd64 (3.13.7-2) ... 64s Setting up python3 (3.13.7-2) ... 64s running python rtupdate hooks for python3.13... 64s running python post-rtupdate hooks for python3.13... 64s Processing triggers for man-db (2.13.1-1) ... 65s autopkgtest [11:51:15]: upgrading testbed (apt dist-upgrade and autopurge) 65s Reading package lists... 65s Building dependency tree... 65s Reading state information... 65s Calculating upgrade... 65s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 65s Reading package lists... 66s Building dependency tree... 66s Reading state information... 66s Solving dependencies... 66s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 68s autopkgtest [11:51:18]: testbed running kernel: Linux 6.17.0-5-generic #5-Ubuntu SMP PREEMPT_DYNAMIC Mon Sep 22 10:00:33 UTC 2025 69s autopkgtest [11:51:19]: @@@@@@@@@@@@@@@@@@@@ apt-source bitshuffle 70s Get:1 http://ftpmaster.internal/ubuntu resolute/universe bitshuffle 0.5.2-1build2 (dsc) [2524 B] 70s Get:2 http://ftpmaster.internal/ubuntu resolute/universe bitshuffle 0.5.2-1build2 (tar) [197 kB] 70s Get:3 http://ftpmaster.internal/ubuntu resolute/universe bitshuffle 0.5.2-1build2 (diff) [7700 B] 70s gpgv: Signature made Tue Mar 4 15:03:04 2025 UTC 70s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 70s gpgv: Can't check signature: No public key 70s dpkg-source: warning: cannot verify inline signature for ./bitshuffle_0.5.2-1build2.dsc: no acceptable signature found 70s autopkgtest [11:51:20]: testing package bitshuffle version 0.5.2-1build2 71s autopkgtest [11:51:21]: build not needed 72s autopkgtest [11:51:22]: test command1: preparing testbed 72s Reading package lists... 72s Building dependency tree... 72s Reading state information... 72s Solving dependencies... 72s The following NEW packages will be installed: 72s bitshuffle libaec0 libamd-comgr3 libamdhip64-6 libblas3 72s libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libgomp1 libhdf5-310 72s libhdf5-hl-310 libhdf5-openmpi-310 libhsa-runtime64-1 libhsakmt1 72s libhwloc-plugins libhwloc15 libibmad5 libibumad3 liblapack3 libllvm21 72s liblzf1 libopenmpi40 libpciaccess0 libpsm2-2 librdmacm1t64 libsz2 libucx0 72s libxnvctrl0 libze1 ocl-icd-libopencl1 python3-h5py python3-h5py-serial 72s python3-numpy python3-numpy-dev 73s 0 upgraded, 34 newly installed, 0 to remove and 0 not upgraded. 73s Need to get 77.5 MB of archives. 73s After this operation, 310 MB of additional disk space will be used. 73s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-numpy-dev amd64 1:2.2.4+ds-1ubuntu1 [147 kB] 73s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7 [259 kB] 73s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 15.2.0-7ubuntu1 [939 kB] 73s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7 [2739 kB] 73s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-numpy amd64 1:2.2.4+ds-1ubuntu1 [5377 kB] 74s Get:6 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec0 amd64 1.1.4-2 [22.9 kB] 74s Get:7 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsz2 amd64 1.1.4-2 [5516 B] 74s Get:8 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-310 amd64 1.14.5+repack-4 [1432 kB] 74s Get:9 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-310 amd64 1.14.5+repack-4 [59.8 kB] 74s Get:10 http://ftpmaster.internal/ubuntu resolute/universe amd64 liblzf1 amd64 3.6-4 [7624 B] 74s Get:11 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5py-serial amd64 3.13.0-1ubuntu1 [1184 kB] 74s Get:12 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5py all 3.13.0-1ubuntu1 [8230 B] 74s Get:13 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 15.2.0-7ubuntu1 [151 kB] 74s Get:14 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10build1 [8360 B] 74s Get:15 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpsm2-2 amd64 11.2.185-2.1 [193 kB] 74s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 librdmacm1t64 amd64 56.1-1ubuntu1 [71.4 kB] 74s Get:17 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfabric1 amd64 2.1.0-1.1 [697 kB] 74s Get:18 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhwloc15 amd64 2.12.2-1 [181 kB] 74s Get:19 http://ftpmaster.internal/ubuntu resolute/main amd64 libllvm21 amd64 1:21.1.2-2ubuntu6 [30.7 MB] 75s Get:20 http://ftpmaster.internal/ubuntu resolute/universe amd64 libamd-comgr3 amd64 7.0.2+dfsg-1 [15.2 MB] 75s Get:21 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhsakmt1 amd64 6.4.3+dfsg-3 [67.5 kB] 75s Get:22 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhsa-runtime64-1 amd64 6.4.3+dfsg-3 [630 kB] 75s Get:23 http://ftpmaster.internal/ubuntu resolute/universe amd64 libamdhip64-6 amd64 6.4.3-3 [10.3 MB] 76s Get:24 http://ftpmaster.internal/ubuntu resolute/main amd64 libibumad3 amd64 56.1-1ubuntu1 [31.3 kB] 76s Get:25 http://ftpmaster.internal/ubuntu resolute/main amd64 libibmad5 amd64 56.1-1ubuntu1 [44.0 kB] 76s Get:26 http://ftpmaster.internal/ubuntu resolute/universe amd64 libucx0 amd64 1.19.0+ds-1build1 [1266 kB] 76s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 libpciaccess0 amd64 0.18.1-1ubuntu2 [19.0 kB] 76s Get:28 http://ftpmaster.internal/ubuntu resolute/main amd64 libxnvctrl0 amd64 510.47.03-0ubuntu4 [12.6 kB] 76s Get:29 http://ftpmaster.internal/ubuntu resolute/universe amd64 libze1 amd64 1.24.1-2 [599 kB] 76s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 ocl-icd-libopencl1 amd64 2.3.4-1 [40.9 kB] 76s Get:31 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhwloc-plugins amd64 2.12.2-1 [22.2 kB] 76s Get:32 http://ftpmaster.internal/ubuntu resolute/universe amd64 libopenmpi40 amd64 5.0.8-8ubuntu1 [3384 kB] 76s Get:33 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-openmpi-310 amd64 1.14.5+repack-4 [1490 kB] 76s Get:34 http://ftpmaster.internal/ubuntu resolute/universe amd64 bitshuffle amd64 0.5.2-1build2 [154 kB] 76s Fetched 77.5 MB in 3s (22.5 MB/s) 76s Selecting previously unselected package python3-numpy-dev:amd64. 76s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83372 files and directories currently installed.) 76s Preparing to unpack .../00-python3-numpy-dev_1%3a2.2.4+ds-1ubuntu1_amd64.deb ... 76s Unpacking python3-numpy-dev:amd64 (1:2.2.4+ds-1ubuntu1) ... 76s Selecting previously unselected package libblas3:amd64. 76s Preparing to unpack .../01-libblas3_3.12.1-7_amd64.deb ... 76s Unpacking libblas3:amd64 (3.12.1-7) ... 76s Selecting previously unselected package libgfortran5:amd64. 76s Preparing to unpack .../02-libgfortran5_15.2.0-7ubuntu1_amd64.deb ... 76s Unpacking libgfortran5:amd64 (15.2.0-7ubuntu1) ... 76s Selecting previously unselected package liblapack3:amd64. 76s Preparing to unpack .../03-liblapack3_3.12.1-7_amd64.deb ... 76s Unpacking liblapack3:amd64 (3.12.1-7) ... 76s Selecting previously unselected package python3-numpy. 76s Preparing to unpack .../04-python3-numpy_1%3a2.2.4+ds-1ubuntu1_amd64.deb ... 76s Unpacking python3-numpy (1:2.2.4+ds-1ubuntu1) ... 77s Selecting previously unselected package libaec0:amd64. 77s Preparing to unpack .../05-libaec0_1.1.4-2_amd64.deb ... 77s Unpacking libaec0:amd64 (1.1.4-2) ... 77s Selecting previously unselected package libsz2:amd64. 77s Preparing to unpack .../06-libsz2_1.1.4-2_amd64.deb ... 77s Unpacking libsz2:amd64 (1.1.4-2) ... 77s Selecting previously unselected package libhdf5-310:amd64. 77s Preparing to unpack .../07-libhdf5-310_1.14.5+repack-4_amd64.deb ... 77s Unpacking libhdf5-310:amd64 (1.14.5+repack-4) ... 77s Selecting previously unselected package libhdf5-hl-310:amd64. 77s Preparing to unpack .../08-libhdf5-hl-310_1.14.5+repack-4_amd64.deb ... 77s Unpacking libhdf5-hl-310:amd64 (1.14.5+repack-4) ... 77s Selecting previously unselected package liblzf1:amd64. 77s Preparing to unpack .../09-liblzf1_3.6-4_amd64.deb ... 77s Unpacking liblzf1:amd64 (3.6-4) ... 77s Selecting previously unselected package python3-h5py-serial. 77s Preparing to unpack .../10-python3-h5py-serial_3.13.0-1ubuntu1_amd64.deb ... 77s Unpacking python3-h5py-serial (3.13.0-1ubuntu1) ... 77s Selecting previously unselected package python3-h5py. 77s Preparing to unpack .../11-python3-h5py_3.13.0-1ubuntu1_all.deb ... 77s Unpacking python3-h5py (3.13.0-1ubuntu1) ... 77s Selecting previously unselected package libgomp1:amd64. 77s Preparing to unpack .../12-libgomp1_15.2.0-7ubuntu1_amd64.deb ... 77s Unpacking libgomp1:amd64 (15.2.0-7ubuntu1) ... 77s Selecting previously unselected package libevent-pthreads-2.1-7t64:amd64. 77s Preparing to unpack .../13-libevent-pthreads-2.1-7t64_2.1.12-stable-10build1_amd64.deb ... 77s Unpacking libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10build1) ... 77s Selecting previously unselected package libpsm2-2. 77s Preparing to unpack .../14-libpsm2-2_11.2.185-2.1_amd64.deb ... 77s Unpacking libpsm2-2 (11.2.185-2.1) ... 77s Selecting previously unselected package librdmacm1t64:amd64. 77s Preparing to unpack .../15-librdmacm1t64_56.1-1ubuntu1_amd64.deb ... 77s Unpacking librdmacm1t64:amd64 (56.1-1ubuntu1) ... 77s Selecting previously unselected package libfabric1:amd64. 77s Preparing to unpack .../16-libfabric1_2.1.0-1.1_amd64.deb ... 77s Unpacking libfabric1:amd64 (2.1.0-1.1) ... 77s Selecting previously unselected package libhwloc15:amd64. 77s Preparing to unpack .../17-libhwloc15_2.12.2-1_amd64.deb ... 77s Unpacking libhwloc15:amd64 (2.12.2-1) ... 77s Selecting previously unselected package libllvm21:amd64. 77s Preparing to unpack .../18-libllvm21_1%3a21.1.2-2ubuntu6_amd64.deb ... 77s Unpacking libllvm21:amd64 (1:21.1.2-2ubuntu6) ... 77s Selecting previously unselected package libamd-comgr3:amd64. 77s Preparing to unpack .../19-libamd-comgr3_7.0.2+dfsg-1_amd64.deb ... 77s Unpacking libamd-comgr3:amd64 (7.0.2+dfsg-1) ... 77s Selecting previously unselected package libhsakmt1:amd64. 77s Preparing to unpack .../20-libhsakmt1_6.4.3+dfsg-3_amd64.deb ... 77s Unpacking libhsakmt1:amd64 (6.4.3+dfsg-3) ... 77s Selecting previously unselected package libhsa-runtime64-1:amd64. 77s Preparing to unpack .../21-libhsa-runtime64-1_6.4.3+dfsg-3_amd64.deb ... 77s Unpacking libhsa-runtime64-1:amd64 (6.4.3+dfsg-3) ... 77s Selecting previously unselected package libamdhip64-6:amd64. 77s Preparing to unpack .../22-libamdhip64-6_6.4.3-3_amd64.deb ... 77s Unpacking libamdhip64-6:amd64 (6.4.3-3) ... 78s Selecting previously unselected package libibumad3:amd64. 78s Preparing to unpack .../23-libibumad3_56.1-1ubuntu1_amd64.deb ... 78s Unpacking libibumad3:amd64 (56.1-1ubuntu1) ... 78s Selecting previously unselected package libibmad5:amd64. 78s Preparing to unpack .../24-libibmad5_56.1-1ubuntu1_amd64.deb ... 78s Unpacking libibmad5:amd64 (56.1-1ubuntu1) ... 78s Selecting previously unselected package libucx0:amd64. 78s Preparing to unpack .../25-libucx0_1.19.0+ds-1build1_amd64.deb ... 78s Unpacking libucx0:amd64 (1.19.0+ds-1build1) ... 78s Selecting previously unselected package libpciaccess0:amd64. 78s Preparing to unpack .../26-libpciaccess0_0.18.1-1ubuntu2_amd64.deb ... 78s Unpacking libpciaccess0:amd64 (0.18.1-1ubuntu2) ... 78s Selecting previously unselected package libxnvctrl0:amd64. 78s Preparing to unpack .../27-libxnvctrl0_510.47.03-0ubuntu4_amd64.deb ... 78s Unpacking libxnvctrl0:amd64 (510.47.03-0ubuntu4) ... 78s Selecting previously unselected package libze1:amd64. 78s Preparing to unpack .../28-libze1_1.24.1-2_amd64.deb ... 78s Unpacking libze1:amd64 (1.24.1-2) ... 78s Selecting previously unselected package ocl-icd-libopencl1:amd64. 78s Preparing to unpack .../29-ocl-icd-libopencl1_2.3.4-1_amd64.deb ... 78s Unpacking ocl-icd-libopencl1:amd64 (2.3.4-1) ... 78s Selecting previously unselected package libhwloc-plugins:amd64. 78s Preparing to unpack .../30-libhwloc-plugins_2.12.2-1_amd64.deb ... 78s Unpacking libhwloc-plugins:amd64 (2.12.2-1) ... 78s Selecting previously unselected package libopenmpi40:amd64. 78s Preparing to unpack .../31-libopenmpi40_5.0.8-8ubuntu1_amd64.deb ... 78s Unpacking libopenmpi40:amd64 (5.0.8-8ubuntu1) ... 78s Selecting previously unselected package libhdf5-openmpi-310:amd64. 78s Preparing to unpack .../32-libhdf5-openmpi-310_1.14.5+repack-4_amd64.deb ... 78s Unpacking libhdf5-openmpi-310:amd64 (1.14.5+repack-4) ... 78s Selecting previously unselected package bitshuffle. 78s Preparing to unpack .../33-bitshuffle_0.5.2-1build2_amd64.deb ... 78s Unpacking bitshuffle (0.5.2-1build2) ... 78s Setting up libpciaccess0:amd64 (0.18.1-1ubuntu2) ... 78s Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10build1) ... 78s Setting up libibumad3:amd64 (56.1-1ubuntu1) ... 78s Setting up libibmad5:amd64 (56.1-1ubuntu1) ... 78s Setting up libgomp1:amd64 (15.2.0-7ubuntu1) ... 78s Setting up libaec0:amd64 (1.1.4-2) ... 78s Setting up libze1:amd64 (1.24.1-2) ... 78s Setting up libxnvctrl0:amd64 (510.47.03-0ubuntu4) ... 78s Setting up libblas3:amd64 (3.12.1-7) ... 78s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 78s Setting up libllvm21:amd64 (1:21.1.2-2ubuntu6) ... 78s Setting up liblzf1:amd64 (3.6-4) ... 78s Setting up libhwloc15:amd64 (2.12.2-1) ... 78s Setting up python3-numpy-dev:amd64 (1:2.2.4+ds-1ubuntu1) ... 78s Setting up libgfortran5:amd64 (15.2.0-7ubuntu1) ... 78s Setting up ocl-icd-libopencl1:amd64 (2.3.4-1) ... 78s Setting up libamd-comgr3:amd64 (7.0.2+dfsg-1) ... 78s Setting up libpsm2-2 (11.2.185-2.1) ... 78s Setting up librdmacm1t64:amd64 (56.1-1ubuntu1) ... 78s Setting up libhsakmt1:amd64 (6.4.3+dfsg-3) ... 78s Setting up libsz2:amd64 (1.1.4-2) ... 78s Setting up libfabric1:amd64 (2.1.0-1.1) ... 78s Setting up liblapack3:amd64 (3.12.1-7) ... 78s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 78s Setting up libhwloc-plugins:amd64 (2.12.2-1) ... 78s Setting up python3-numpy (1:2.2.4+ds-1ubuntu1) ... 79s Setting up libhdf5-310:amd64 (1.14.5+repack-4) ... 79s Setting up libhsa-runtime64-1:amd64 (6.4.3+dfsg-3) ... 79s Setting up libhdf5-hl-310:amd64 (1.14.5+repack-4) ... 79s Setting up python3-h5py-serial (3.13.0-1ubuntu1) ... 79s Setting up libamdhip64-6:amd64 (6.4.3-3) ... 79s Setting up python3-h5py (3.13.0-1ubuntu1) ... 80s Setting up libucx0:amd64 (1.19.0+ds-1build1) ... 80s Setting up libopenmpi40:amd64 (5.0.8-8ubuntu1) ... 80s Setting up libhdf5-openmpi-310:amd64 (1.14.5+repack-4) ... 80s Setting up bitshuffle (0.5.2-1build2) ... 80s Processing triggers for man-db (2.13.1-1) ... 80s Processing triggers for libc-bin (2.42-2ubuntu2) ... 81s autopkgtest [11:51:31]: test command1: python3 -c 'import sys, h5py; sys.exit(not h5py.h5z.filter_avail(32008))' 81s autopkgtest [11:51:31]: test command1: [----------------------- 82s autopkgtest [11:51:32]: test command1: -----------------------] 82s autopkgtest [11:51:32]: test command1: - - - - - - - - - - results - - - - - - - - - - 82s command1 PASS 82s autopkgtest [11:51:32]: test command2: preparing testbed 83s Reading package lists... 83s Building dependency tree... 83s Reading state information... 83s Solving dependencies... 83s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 84s autopkgtest [11:51:34]: test command2: H5PY_ALWAYS_USE_MPI=1 python3 -c 'import sys, h5py; sys.exit(not h5py.h5z.filter_avail(32008))' 84s autopkgtest [11:51:34]: test command2: [----------------------- 84s autopkgtest [11:51:34]: test command2: -----------------------] 85s autopkgtest [11:51:35]: test command2: - - - - - - - - - - results - - - - - - - - - - 85s command2 PASS 85s autopkgtest [11:51:35]: test testsuite: preparing testbed 94s Creating nova instance adt-resolute-amd64-bitshuffle-20251117-115010-juju-7f2275-prod-proposed-migration-environment-2-3774fc11-da61-44df-a9d4-c500e8b67426 from image adt/ubuntu-resolute-amd64-server-20251117.img (UUID 47cb9b95-dcf3-40f8-972d-d06b1b09ded2)... 152s autopkgtest [11:52:42]: testbed dpkg architecture: amd64 153s autopkgtest [11:52:43]: testbed apt version: 3.1.11 153s autopkgtest [11:52:43]: @@@@@@@@@@@@@@@@@@@@ test bed setup 153s autopkgtest [11:52:43]: testbed release detected to be: resolute 154s autopkgtest [11:52:44]: updating testbed package index (apt update) 154s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease [87.8 kB] 155s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 155s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 155s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 155s Get:5 http://ftpmaster.internal/ubuntu resolute-proposed/universe Sources [868 kB] 156s Get:6 http://ftpmaster.internal/ubuntu resolute-proposed/main Sources [81.1 kB] 156s Get:7 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse Sources [22.9 kB] 156s Get:8 http://ftpmaster.internal/ubuntu resolute-proposed/restricted Sources [9848 B] 156s Get:9 http://ftpmaster.internal/ubuntu resolute-proposed/main i386 Packages [118 kB] 156s Get:10 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 Packages [159 kB] 156s Get:11 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 c-n-f Metadata [3096 B] 156s Get:12 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 Packages [64.6 kB] 156s Get:13 http://ftpmaster.internal/ubuntu resolute-proposed/restricted i386 Packages [3744 B] 156s Get:14 http://ftpmaster.internal/ubuntu resolute-proposed/restricted amd64 c-n-f Metadata [336 B] 156s Get:15 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 Packages [607 kB] 156s Get:16 http://ftpmaster.internal/ubuntu resolute-proposed/universe i386 Packages [279 kB] 156s Get:17 http://ftpmaster.internal/ubuntu resolute-proposed/universe amd64 c-n-f Metadata [21.2 kB] 156s Get:18 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse i386 Packages [6516 B] 156s Get:19 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 Packages [13.4 kB] 156s Get:20 http://ftpmaster.internal/ubuntu resolute-proposed/multiverse amd64 c-n-f Metadata [680 B] 159s Fetched 2346 kB in 2s (1067 kB/s) 160s Reading package lists... 161s Hit:1 http://ftpmaster.internal/ubuntu resolute-proposed InRelease 161s Hit:2 http://ftpmaster.internal/ubuntu resolute InRelease 161s Hit:3 http://ftpmaster.internal/ubuntu resolute-updates InRelease 161s Hit:4 http://ftpmaster.internal/ubuntu resolute-security InRelease 162s Reading package lists... 162s Reading package lists... 162s Building dependency tree... 162s Reading state information... 162s Calculating upgrade... 162s The following packages will be upgraded: 162s libpython3-stdlib python3 python3-minimal usbutils 162s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 162s Need to get 146 kB of archives. 162s After this operation, 0 B of additional disk space will be used. 162s Get:1 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-minimal amd64 3.13.7-2 [27.8 kB] 162s Get:2 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3 amd64 3.13.7-2 [23.9 kB] 162s Get:3 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 libpython3-stdlib amd64 3.13.7-2 [10.6 kB] 162s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 usbutils amd64 1:019-1 [83.9 kB] 163s dpkg-preconfigure: unable to re-open stdin: No such file or directory 163s Fetched 146 kB in 0s (347 kB/s) 163s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83372 files and directories currently installed.) 163s Preparing to unpack .../python3-minimal_3.13.7-2_amd64.deb ... 163s Unpacking python3-minimal (3.13.7-2) over (3.13.7-1) ... 163s Setting up python3-minimal (3.13.7-2) ... 163s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83372 files and directories currently installed.) 163s Preparing to unpack .../python3_3.13.7-2_amd64.deb ... 163s running python pre-rtupdate hooks for python3.13... 163s Unpacking python3 (3.13.7-2) over (3.13.7-1) ... 163s Preparing to unpack .../libpython3-stdlib_3.13.7-2_amd64.deb ... 163s Unpacking libpython3-stdlib:amd64 (3.13.7-2) over (3.13.7-1) ... 163s Preparing to unpack .../usbutils_1%3a019-1_amd64.deb ... 164s Unpacking usbutils (1:019-1) over (1:018-2) ... 164s Setting up usbutils (1:019-1) ... 164s Setting up libpython3-stdlib:amd64 (3.13.7-2) ... 164s Setting up python3 (3.13.7-2) ... 164s running python rtupdate hooks for python3.13... 164s running python post-rtupdate hooks for python3.13... 164s Processing triggers for man-db (2.13.1-1) ... 165s autopkgtest [11:52:55]: upgrading testbed (apt dist-upgrade and autopurge) 165s Reading package lists... 165s Building dependency tree... 165s Reading state information... 165s Calculating upgrade... 166s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 166s Reading package lists... 166s Building dependency tree... 166s Reading state information... 166s Solving dependencies... 166s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 169s Reading package lists... 169s Building dependency tree... 169s Reading state information... 170s Solving dependencies... 170s The following NEW packages will be installed: 170s bitshuffle hdf5-tools libaec0 libamd-comgr3 libamdhip64-6 libblas3 170s libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libgomp1 libhdf5-310 170s libhdf5-hl-310 libhdf5-openmpi-310 libhsa-runtime64-1 libhsakmt1 170s libhwloc-plugins libhwloc15 libibmad5 libibumad3 liblapack3 libllvm21 170s liblzf1 libopenmpi40 libpciaccess0 libpsm2-2 libpython3.14-minimal 170s libpython3.14-stdlib librdmacm1t64 libsz2 libucx0 libxnvctrl0 libze1 170s ocl-icd-libopencl1 python3-all python3-h5py python3-h5py-serial 170s python3-iniconfig python3-numpy python3-numpy-dev python3-pluggy 170s python3-pytest python3.14 python3.14-minimal 170s 0 upgraded, 43 newly installed, 0 to remove and 0 not upgraded. 170s Need to get 84.8 MB of archives. 170s After this operation, 337 MB of additional disk space will be used. 170s Get:1 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-numpy-dev amd64 1:2.2.4+ds-1ubuntu1 [147 kB] 170s Get:2 http://ftpmaster.internal/ubuntu resolute/main amd64 libblas3 amd64 3.12.1-7 [259 kB] 170s Get:3 http://ftpmaster.internal/ubuntu resolute/main amd64 libgfortran5 amd64 15.2.0-7ubuntu1 [939 kB] 171s Get:4 http://ftpmaster.internal/ubuntu resolute/main amd64 liblapack3 amd64 3.12.1-7 [2739 kB] 172s Get:5 http://ftpmaster.internal/ubuntu resolute/main amd64 python3-numpy amd64 1:2.2.4+ds-1ubuntu1 [5377 kB] 173s Get:6 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-minimal amd64 3.14.0-4 [906 kB] 173s Get:7 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.14-minimal amd64 3.14.0-4 [2559 kB] 173s Get:8 http://ftpmaster.internal/ubuntu resolute/universe amd64 libaec0 amd64 1.1.4-2 [22.9 kB] 173s Get:9 http://ftpmaster.internal/ubuntu resolute/universe amd64 libsz2 amd64 1.1.4-2 [5516 B] 173s Get:10 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-310 amd64 1.14.5+repack-4 [1432 kB] 174s Get:11 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-hl-310 amd64 1.14.5+repack-4 [59.8 kB] 174s Get:12 http://ftpmaster.internal/ubuntu resolute/universe amd64 liblzf1 amd64 3.6-4 [7624 B] 174s Get:13 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5py-serial amd64 3.13.0-1ubuntu1 [1184 kB] 174s Get:14 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-h5py all 3.13.0-1ubuntu1 [8230 B] 174s Get:15 http://ftpmaster.internal/ubuntu resolute/main amd64 libgomp1 amd64 15.2.0-7ubuntu1 [151 kB] 174s Get:16 http://ftpmaster.internal/ubuntu resolute/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10build1 [8360 B] 174s Get:17 http://ftpmaster.internal/ubuntu resolute/universe amd64 libpsm2-2 amd64 11.2.185-2.1 [193 kB] 174s Get:18 http://ftpmaster.internal/ubuntu resolute/main amd64 librdmacm1t64 amd64 56.1-1ubuntu1 [71.4 kB] 174s Get:19 http://ftpmaster.internal/ubuntu resolute/universe amd64 libfabric1 amd64 2.1.0-1.1 [697 kB] 174s Get:20 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhwloc15 amd64 2.12.2-1 [181 kB] 174s Get:21 http://ftpmaster.internal/ubuntu resolute/main amd64 libllvm21 amd64 1:21.1.2-2ubuntu6 [30.7 MB] 175s Get:22 http://ftpmaster.internal/ubuntu resolute/universe amd64 libamd-comgr3 amd64 7.0.2+dfsg-1 [15.2 MB] 176s Get:23 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhsakmt1 amd64 6.4.3+dfsg-3 [67.5 kB] 176s Get:24 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhsa-runtime64-1 amd64 6.4.3+dfsg-3 [630 kB] 176s Get:25 http://ftpmaster.internal/ubuntu resolute/universe amd64 libamdhip64-6 amd64 6.4.3-3 [10.3 MB] 176s Get:26 http://ftpmaster.internal/ubuntu resolute/main amd64 libibumad3 amd64 56.1-1ubuntu1 [31.3 kB] 176s Get:27 http://ftpmaster.internal/ubuntu resolute/main amd64 libibmad5 amd64 56.1-1ubuntu1 [44.0 kB] 176s Get:28 http://ftpmaster.internal/ubuntu resolute/universe amd64 libucx0 amd64 1.19.0+ds-1build1 [1266 kB] 176s Get:29 http://ftpmaster.internal/ubuntu resolute/main amd64 libpciaccess0 amd64 0.18.1-1ubuntu2 [19.0 kB] 176s Get:30 http://ftpmaster.internal/ubuntu resolute/main amd64 libxnvctrl0 amd64 510.47.03-0ubuntu4 [12.6 kB] 176s Get:31 http://ftpmaster.internal/ubuntu resolute/universe amd64 libze1 amd64 1.24.1-2 [599 kB] 176s Get:32 http://ftpmaster.internal/ubuntu resolute/main amd64 ocl-icd-libopencl1 amd64 2.3.4-1 [40.9 kB] 176s Get:33 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhwloc-plugins amd64 2.12.2-1 [22.2 kB] 176s Get:34 http://ftpmaster.internal/ubuntu resolute/universe amd64 libopenmpi40 amd64 5.0.8-8ubuntu1 [3384 kB] 176s Get:35 http://ftpmaster.internal/ubuntu resolute/universe amd64 libhdf5-openmpi-310 amd64 1.14.5+repack-4 [1490 kB] 176s Get:36 http://ftpmaster.internal/ubuntu resolute/universe amd64 bitshuffle amd64 0.5.2-1build2 [154 kB] 176s Get:37 http://ftpmaster.internal/ubuntu resolute/universe amd64 hdf5-tools amd64 1.14.5+repack-4 [383 kB] 176s Get:38 http://ftpmaster.internal/ubuntu resolute/main amd64 libpython3.14-stdlib amd64 3.14.0-4 [2397 kB] 176s Get:39 http://ftpmaster.internal/ubuntu resolute/main amd64 python3.14 amd64 3.14.0-4 [805 kB] 176s Get:40 http://ftpmaster.internal/ubuntu resolute-proposed/main amd64 python3-all amd64 3.13.7-2 [890 B] 176s Get:41 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-iniconfig all 2.1.0-1 [6840 B] 176s Get:42 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pluggy all 1.6.0-1 [21.0 kB] 176s Get:43 http://ftpmaster.internal/ubuntu resolute/universe amd64 python3-pytest all 8.3.5-2 [252 kB] 177s Fetched 84.8 MB in 7s (12.6 MB/s) 177s Selecting previously unselected package python3-numpy-dev:amd64. 177s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 83372 files and directories currently installed.) 177s Preparing to unpack .../00-python3-numpy-dev_1%3a2.2.4+ds-1ubuntu1_amd64.deb ... 177s Unpacking python3-numpy-dev:amd64 (1:2.2.4+ds-1ubuntu1) ... 177s Selecting previously unselected package libblas3:amd64. 177s Preparing to unpack .../01-libblas3_3.12.1-7_amd64.deb ... 177s Unpacking libblas3:amd64 (3.12.1-7) ... 177s Selecting previously unselected package libgfortran5:amd64. 177s Preparing to unpack .../02-libgfortran5_15.2.0-7ubuntu1_amd64.deb ... 177s Unpacking libgfortran5:amd64 (15.2.0-7ubuntu1) ... 177s Selecting previously unselected package liblapack3:amd64. 177s Preparing to unpack .../03-liblapack3_3.12.1-7_amd64.deb ... 177s Unpacking liblapack3:amd64 (3.12.1-7) ... 177s Selecting previously unselected package python3-numpy. 177s Preparing to unpack .../04-python3-numpy_1%3a2.2.4+ds-1ubuntu1_amd64.deb ... 177s Unpacking python3-numpy (1:2.2.4+ds-1ubuntu1) ... 177s Selecting previously unselected package libpython3.14-minimal:amd64. 177s Preparing to unpack .../05-libpython3.14-minimal_3.14.0-4_amd64.deb ... 177s Unpacking libpython3.14-minimal:amd64 (3.14.0-4) ... 177s Selecting previously unselected package python3.14-minimal. 177s Preparing to unpack .../06-python3.14-minimal_3.14.0-4_amd64.deb ... 177s Unpacking python3.14-minimal (3.14.0-4) ... 177s Selecting previously unselected package libaec0:amd64. 177s Preparing to unpack .../07-libaec0_1.1.4-2_amd64.deb ... 177s Unpacking libaec0:amd64 (1.1.4-2) ... 177s Selecting previously unselected package libsz2:amd64. 177s Preparing to unpack .../08-libsz2_1.1.4-2_amd64.deb ... 177s Unpacking libsz2:amd64 (1.1.4-2) ... 177s Selecting previously unselected package libhdf5-310:amd64. 177s Preparing to unpack .../09-libhdf5-310_1.14.5+repack-4_amd64.deb ... 177s Unpacking libhdf5-310:amd64 (1.14.5+repack-4) ... 177s Selecting previously unselected package libhdf5-hl-310:amd64. 177s Preparing to unpack .../10-libhdf5-hl-310_1.14.5+repack-4_amd64.deb ... 177s Unpacking libhdf5-hl-310:amd64 (1.14.5+repack-4) ... 177s Selecting previously unselected package liblzf1:amd64. 177s Preparing to unpack .../11-liblzf1_3.6-4_amd64.deb ... 177s Unpacking liblzf1:amd64 (3.6-4) ... 177s Selecting previously unselected package python3-h5py-serial. 177s Preparing to unpack .../12-python3-h5py-serial_3.13.0-1ubuntu1_amd64.deb ... 177s Unpacking python3-h5py-serial (3.13.0-1ubuntu1) ... 177s Selecting previously unselected package python3-h5py. 177s Preparing to unpack .../13-python3-h5py_3.13.0-1ubuntu1_all.deb ... 177s Unpacking python3-h5py (3.13.0-1ubuntu1) ... 177s Selecting previously unselected package libgomp1:amd64. 177s Preparing to unpack .../14-libgomp1_15.2.0-7ubuntu1_amd64.deb ... 177s Unpacking libgomp1:amd64 (15.2.0-7ubuntu1) ... 177s Selecting previously unselected package libevent-pthreads-2.1-7t64:amd64. 177s Preparing to unpack .../15-libevent-pthreads-2.1-7t64_2.1.12-stable-10build1_amd64.deb ... 177s Unpacking libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10build1) ... 177s Selecting previously unselected package libpsm2-2. 177s Preparing to unpack .../16-libpsm2-2_11.2.185-2.1_amd64.deb ... 177s Unpacking libpsm2-2 (11.2.185-2.1) ... 177s Selecting previously unselected package librdmacm1t64:amd64. 177s Preparing to unpack .../17-librdmacm1t64_56.1-1ubuntu1_amd64.deb ... 177s Unpacking librdmacm1t64:amd64 (56.1-1ubuntu1) ... 177s Selecting previously unselected package libfabric1:amd64. 177s Preparing to unpack .../18-libfabric1_2.1.0-1.1_amd64.deb ... 177s Unpacking libfabric1:amd64 (2.1.0-1.1) ... 177s Selecting previously unselected package libhwloc15:amd64. 177s Preparing to unpack .../19-libhwloc15_2.12.2-1_amd64.deb ... 177s Unpacking libhwloc15:amd64 (2.12.2-1) ... 177s Selecting previously unselected package libllvm21:amd64. 177s Preparing to unpack .../20-libllvm21_1%3a21.1.2-2ubuntu6_amd64.deb ... 177s Unpacking libllvm21:amd64 (1:21.1.2-2ubuntu6) ... 178s Selecting previously unselected package libamd-comgr3:amd64. 178s Preparing to unpack .../21-libamd-comgr3_7.0.2+dfsg-1_amd64.deb ... 178s Unpacking libamd-comgr3:amd64 (7.0.2+dfsg-1) ... 178s Selecting previously unselected package libhsakmt1:amd64. 178s Preparing to unpack .../22-libhsakmt1_6.4.3+dfsg-3_amd64.deb ... 178s Unpacking libhsakmt1:amd64 (6.4.3+dfsg-3) ... 178s Selecting previously unselected package libhsa-runtime64-1:amd64. 178s Preparing to unpack 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178s Selecting previously unselected package libhdf5-openmpi-310:amd64. 178s Preparing to unpack .../34-libhdf5-openmpi-310_1.14.5+repack-4_amd64.deb ... 178s Unpacking libhdf5-openmpi-310:amd64 (1.14.5+repack-4) ... 178s Selecting previously unselected package bitshuffle. 178s Preparing to unpack .../35-bitshuffle_0.5.2-1build2_amd64.deb ... 178s Unpacking bitshuffle (0.5.2-1build2) ... 178s Selecting previously unselected package hdf5-tools. 178s Preparing to unpack .../36-hdf5-tools_1.14.5+repack-4_amd64.deb ... 178s Unpacking hdf5-tools (1.14.5+repack-4) ... 178s Selecting previously unselected package libpython3.14-stdlib:amd64. 178s Preparing to unpack .../37-libpython3.14-stdlib_3.14.0-4_amd64.deb ... 178s Unpacking libpython3.14-stdlib:amd64 (3.14.0-4) ... 178s Selecting previously unselected package python3.14. 178s Preparing to unpack .../38-python3.14_3.14.0-4_amd64.deb ... 178s Unpacking python3.14 (3.14.0-4) ... 179s Selecting previously unselected package python3-all. 179s Preparing to unpack .../39-python3-all_3.13.7-2_amd64.deb ... 179s Unpacking python3-all (3.13.7-2) ... 179s Selecting previously unselected package python3-iniconfig. 179s Preparing to unpack .../40-python3-iniconfig_2.1.0-1_all.deb ... 179s Unpacking python3-iniconfig (2.1.0-1) ... 179s Selecting previously unselected package python3-pluggy. 179s Preparing to unpack .../41-python3-pluggy_1.6.0-1_all.deb ... 179s Unpacking python3-pluggy (1.6.0-1) ... 179s Selecting previously unselected package python3-pytest. 179s Preparing to unpack .../42-python3-pytest_8.3.5-2_all.deb ... 179s Unpacking python3-pytest (8.3.5-2) ... 179s Setting up python3-iniconfig (2.1.0-1) ... 179s Setting up libpciaccess0:amd64 (0.18.1-1ubuntu2) ... 179s Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10build1) ... 179s Setting up libpython3.14-minimal:amd64 (3.14.0-4) ... 179s Setting up libibumad3:amd64 (56.1-1ubuntu1) ... 179s Setting up libibmad5:amd64 (56.1-1ubuntu1) ... 179s Setting up libgomp1:amd64 (15.2.0-7ubuntu1) ... 179s Setting up libaec0:amd64 (1.1.4-2) ... 179s Setting up libze1:amd64 (1.24.1-2) ... 179s Setting up libxnvctrl0:amd64 (510.47.03-0ubuntu4) ... 179s Setting up libblas3:amd64 (3.12.1-7) ... 179s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 179s Setting up libllvm21:amd64 (1:21.1.2-2ubuntu6) ... 179s Setting up liblzf1:amd64 (3.6-4) ... 179s Setting up libhwloc15:amd64 (2.12.2-1) ... 179s Setting up python3-numpy-dev:amd64 (1:2.2.4+ds-1ubuntu1) ... 179s Setting up libgfortran5:amd64 (15.2.0-7ubuntu1) ... 179s Setting up python3-pluggy (1.6.0-1) ... 179s Setting up ocl-icd-libopencl1:amd64 (2.3.4-1) ... 179s Setting up libamd-comgr3:amd64 (7.0.2+dfsg-1) ... 179s Setting up libpsm2-2 (11.2.185-2.1) ... 179s Setting up librdmacm1t64:amd64 (56.1-1ubuntu1) ... 179s Setting up python3.14-minimal (3.14.0-4) ... 180s Setting up libhsakmt1:amd64 (6.4.3+dfsg-3) ... 180s Setting up libsz2:amd64 (1.1.4-2) ... 180s Setting up libfabric1:amd64 (2.1.0-1.1) ... 180s Setting up liblapack3:amd64 (3.12.1-7) ... 180s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 180s Setting up libpython3.14-stdlib:amd64 (3.14.0-4) ... 180s Setting up python3-pytest (8.3.5-2) ... 180s Setting up libhwloc-plugins:amd64 (2.12.2-1) ... 180s Setting up python3-numpy (1:2.2.4+ds-1ubuntu1) ... 183s Setting up libhdf5-310:amd64 (1.14.5+repack-4) ... 183s Setting up libhsa-runtime64-1:amd64 (6.4.3+dfsg-3) ... 183s Setting up python3.14 (3.14.0-4) ... 184s Setting up libhdf5-hl-310:amd64 (1.14.5+repack-4) ... 184s Setting up python3-h5py-serial (3.13.0-1ubuntu1) ... 185s Setting up python3-all (3.13.7-2) ... 185s Setting up hdf5-tools (1.14.5+repack-4) ... 185s Setting up libamdhip64-6:amd64 (6.4.3-3) ... 185s Setting up python3-h5py (3.13.0-1ubuntu1) ... 185s Setting up libucx0:amd64 (1.19.0+ds-1build1) ... 185s Setting up libopenmpi40:amd64 (5.0.8-8ubuntu1) ... 185s Setting up libhdf5-openmpi-310:amd64 (1.14.5+repack-4) ... 185s Setting up bitshuffle (0.5.2-1build2) ... 185s Processing triggers for systemd (257.9-0ubuntu2) ... 185s Processing triggers for man-db (2.13.1-1) ... 185s Processing triggers for libc-bin (2.42-2ubuntu2) ... 187s autopkgtest [11:53:17]: test testsuite: [----------------------- 188s 'tests' -> '/tmp/autopkgtest.euTbcl/autopkgtest_tmp/tests' 188s 'tests/test_ext.py' -> '/tmp/autopkgtest.euTbcl/autopkgtest_tmp/tests/test_ext.py' 188s 'tests/test_regression.py' -> '/tmp/autopkgtest.euTbcl/autopkgtest_tmp/tests/test_regression.py' 188s 'tests/make_regression_tdata.py' -> '/tmp/autopkgtest.euTbcl/autopkgtest_tmp/tests/make_regression_tdata.py' 188s 'tests/test_h5plugin.py' -> '/tmp/autopkgtest.euTbcl/autopkgtest_tmp/tests/test_h5plugin.py' 188s 'tests/data' -> '/tmp/autopkgtest.euTbcl/autopkgtest_tmp/tests/data' 188s 'tests/data/regression_0.4.0.h5' -> '/tmp/autopkgtest.euTbcl/autopkgtest_tmp/tests/data/regression_0.4.0.h5' 188s 'tests/data/regression_0.1.3.h5' -> '/tmp/autopkgtest.euTbcl/autopkgtest_tmp/tests/data/regression_0.1.3.h5' 188s 'tests/test_h5filter.py' -> '/tmp/autopkgtest.euTbcl/autopkgtest_tmp/tests/test_h5filter.py' 188s [*] testing on python3.14: 188s ============================= test session starts ============================== 188s platform linux -- Python 3.14.0, pytest-8.3.5, pluggy-1.6.0 -- /usr/bin/python3.14 188s cachedir: .pytest_cache 188s rootdir: /tmp/autopkgtest.euTbcl/autopkgtest_tmp 188s plugins: typeguard-4.4.2 188s collecting ... collected 0 items / 1 error 188s 188s ==================================== ERRORS ==================================== 188s ______________________ ERROR collecting tests/test_ext.py ______________________ 188s ImportError while importing test module '/tmp/autopkgtest.euTbcl/autopkgtest_tmp/tests/test_ext.py'. 188s Hint: make sure your test modules/packages have valid Python names. 188s Traceback: 188s /usr/lib/python3/dist-packages/numpy/_core/__init__.py:23: in 188s from . import multiarray 188s /usr/lib/python3/dist-packages/numpy/_core/multiarray.py:10: in 188s from . import overrides 188s /usr/lib/python3/dist-packages/numpy/_core/overrides.py:7: in 188s from numpy._core._multiarray_umath import ( 188s E ModuleNotFoundError: No module named 'numpy._core._multiarray_umath' 188s 188s During handling of the above exception, another exception occurred: 188s /usr/lib/python3/dist-packages/numpy/__init__.py:114: in 188s from numpy.__config__ import show_config 188s /usr/lib/python3/dist-packages/numpy/__config__.py:4: in 188s from numpy._core._multiarray_umath import ( 188s /usr/lib/python3/dist-packages/numpy/_core/__init__.py:49: in 188s raise ImportError(msg) 188s E ImportError: 188s E 188s E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! 188s E 188s E Importing the numpy C-extensions failed. This error can happen for 188s E many reasons, often due to issues with your setup or how NumPy was 188s E installed. 188s E 188s E We have compiled some common reasons and troubleshooting tips at: 188s E 188s E https://numpy.org/devdocs/user/troubleshooting-importerror.html 188s E 188s E Please note and check the following: 188s E 188s E * The Python version is: Python3.14 from "/usr/bin/python3.14" 188s E * The NumPy version is: "2.2.4" 188s E 188s E and make sure that they are the versions you expect. 188s E Please carefully study the documentation linked above for further help. 188s E 188s E Original error was: No module named 'numpy._core._multiarray_umath' 188s 188s The above exception was the direct cause of the following exception: 188s /usr/lib/python3.14/importlib/__init__.py:88: in import_module 188s return _bootstrap._gcd_import(name[level:], package, level) 188s tests/test_ext.py:6: in 188s import numpy as np 188s /usr/lib/python3/dist-packages/numpy/__init__.py:119: in 188s raise ImportError(msg) from e 188s E ImportError: Error importing numpy: you should not try to import numpy from 188s E its source directory; please exit the numpy source tree, and relaunch 188s E your python interpreter from there. 188s !!!!!!!!!!!!!!!!!!!!!!!!!! stopping after 1 failures !!!!!!!!!!!!!!!!!!!!!!!!!!! 188s =============================== 1 error in 0.05s =============================== 188s autopkgtest [11:53:18]: test testsuite: -----------------------] 189s testsuite FAIL non-zero exit status 1 189s autopkgtest [11:53:19]: test testsuite: - - - - - - - - - - results - - - - - - - - - - 189s autopkgtest [11:53:19]: @@@@@@@@@@@@@@@@@@@@ summary 189s command1 PASS 189s command2 PASS 189s testsuite FAIL non-zero exit status 1