0s autopkgtest [15:19:02]: starting date and time: 2025-05-02 15:19:02+0000 0s autopkgtest [15:19:02]: git checkout: 9986aa8c Merge branch 'skia/fix_network_interface' into 'ubuntu/production' 0s autopkgtest [15:19:02]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.w7ewviou/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base,src:r-bioc-bioccheck --apt-upgrade r-bioc-oligo --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.5.0-3 r-bioc-bioccheck/1.42.1+dfsg-2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-s390x-19.secgroup --name adt-questing-s390x-r-bioc-oligo-20250502-151902-juju-7f2275-prod-proposed-migration-environment-15-ed6aa854-aacc-4f99-820b-d8f66890d111 --image adt/ubuntu-questing-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-s390x -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 76s autopkgtest [15:20:18]: testbed dpkg architecture: s390x 76s autopkgtest [15:20:18]: testbed apt version: 3.0.0 76s autopkgtest [15:20:18]: @@@@@@@@@@@@@@@@@@@@ test bed setup 76s autopkgtest [15:20:18]: testbed release detected to be: None 77s autopkgtest [15:20:19]: updating testbed package index (apt update) 77s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB] 78s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 78s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 78s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 78s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [164 kB] 78s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [44.2 kB] 78s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [2024 kB] 80s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main s390x Packages [194 kB] 80s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x Packages [1236 kB] 80s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse s390x Packages [8572 B] 80s Fetched 3781 kB in 3s (1289 kB/s) 81s Reading package lists... 81s autopkgtest [15:20:23]: upgrading testbed (apt dist-upgrade and autopurge) 82s Reading package lists... 82s Building dependency tree... 82s Reading state information... 82s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 82s Starting 2 pkgProblemResolver with broken count: 0 82s Done 82s Entering ResolveByKeep 82s 82s Calculating upgrade... 82s The following packages will be upgraded: 82s fwupd htop libftdi1-2 libfwupd3 libnpth0t64 libsensors-config libsensors5 82s liburcu8t64 nano usb.ids 83s 10 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 83s Need to get 2536 kB of archives. 83s After this operation, 3749 kB disk space will be freed. 83s Get:1 http://ftpmaster.internal/ubuntu questing/main s390x libnpth0t64 s390x 1.8-3 [8778 B] 83s Get:2 http://ftpmaster.internal/ubuntu questing/main s390x libsensors-config all 1:3.6.2-2 [6756 B] 83s Get:3 http://ftpmaster.internal/ubuntu questing/main s390x libsensors5 s390x 1:3.6.2-2 [29.2 kB] 83s Get:4 http://ftpmaster.internal/ubuntu questing/main s390x liburcu8t64 s390x 0.15.2-2 [66.3 kB] 83s Get:5 http://ftpmaster.internal/ubuntu questing/main s390x nano s390x 8.4-1 [299 kB] 83s Get:6 http://ftpmaster.internal/ubuntu questing/main s390x usb.ids all 2025.04.01-1 [223 kB] 83s Get:7 http://ftpmaster.internal/ubuntu questing/main s390x fwupd s390x 2.0.8-3 [1548 kB] 84s Get:8 http://ftpmaster.internal/ubuntu questing/main s390x libfwupd3 s390x 2.0.8-3 [135 kB] 84s Get:9 http://ftpmaster.internal/ubuntu questing/main s390x htop s390x 3.4.1-4 [189 kB] 84s Get:10 http://ftpmaster.internal/ubuntu questing/main s390x libftdi1-2 s390x 1.5-10 [31.4 kB] 84s Fetched 2536 kB in 1s (1855 kB/s) 84s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81472 files and directories currently installed.) 84s Preparing to unpack .../libnpth0t64_1.8-3_s390x.deb ... 84s Unpacking libnpth0t64:s390x (1.8-3) over (1.8-2) ... 84s Setting up libnpth0t64:s390x (1.8-3) ... 84s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81472 files and directories currently installed.) 84s Preparing to unpack .../0-libsensors-config_1%3a3.6.2-2_all.deb ... 84s Unpacking libsensors-config (1:3.6.2-2) over (1:3.6.0-10) ... 84s Preparing to unpack .../1-libsensors5_1%3a3.6.2-2_s390x.deb ... 84s Unpacking libsensors5:s390x (1:3.6.2-2) over (1:3.6.0-10) ... 84s Preparing to unpack .../2-liburcu8t64_0.15.2-2_s390x.deb ... 84s Unpacking liburcu8t64:s390x (0.15.2-2) over (0.15.1-1) ... 84s Preparing to unpack .../3-nano_8.4-1_s390x.deb ... 84s Unpacking nano (8.4-1) over (8.3-1) ... 84s Preparing to unpack .../4-usb.ids_2025.04.01-1_all.deb ... 84s Unpacking usb.ids (2025.04.01-1) over (2025.01.14-1) ... 85s Preparing to unpack .../5-fwupd_2.0.8-3_s390x.deb ... 85s Unpacking fwupd (2.0.8-3) over (2.0.7-1) ... 85s dpkg: warning: unable to delete old directory '/etc/grub.d': Directory not empty 85s Preparing to unpack .../6-libfwupd3_2.0.8-3_s390x.deb ... 85s Unpacking libfwupd3:s390x (2.0.8-3) over (2.0.7-1) ... 85s Preparing to unpack .../7-htop_3.4.1-4_s390x.deb ... 85s Unpacking htop (3.4.1-4) over (3.4.0-2) ... 85s Preparing to unpack .../8-libftdi1-2_1.5-10_s390x.deb ... 85s Unpacking libftdi1-2:s390x (1.5-10) over (1.5-8build1) ... 85s Setting up liburcu8t64:s390x (0.15.2-2) ... 85s Setting up htop (3.4.1-4) ... 85s Setting up libsensors-config (1:3.6.2-2) ... 85s Installing new version of config file /etc/sensors3.conf ... 85s Setting up libfwupd3:s390x (2.0.8-3) ... 85s Setting up libftdi1-2:s390x (1.5-10) ... 85s Setting up usb.ids (2025.04.01-1) ... 85s Setting up libsensors5:s390x (1:3.6.2-2) ... 85s Setting up nano (8.4-1) ... 85s Installing new version of config file /etc/nanorc ... 85s Setting up fwupd (2.0.8-3) ... 85s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 85s fwupd.service is a disabled or a static unit not running, not starting it. 85s Processing triggers for man-db (2.13.0-1) ... 86s Processing triggers for dbus (1.16.2-2ubuntu1) ... 86s Processing triggers for install-info (7.1.1-1) ... 86s Processing triggers for libc-bin (2.41-6ubuntu1) ... 87s Reading package lists... 87s Building dependency tree... 87s Reading state information... 87s Starting pkgProblemResolver with broken count: 0 87s Starting 2 pkgProblemResolver with broken count: 0 87s Done 87s Solving dependencies... 87s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 87s autopkgtest [15:20:29]: rebooting testbed after setup commands that affected boot 109s autopkgtest [15:20:51]: testbed running kernel: Linux 6.14.0-15-generic #15-Ubuntu SMP Sun Apr 6 13:39:00 UTC 2025 111s autopkgtest [15:20:53]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-oligo 113s Get:1 http://ftpmaster.internal/ubuntu questing/universe r-bioc-oligo 1.70.0+ds-2 (dsc) [2274 B] 113s Get:2 http://ftpmaster.internal/ubuntu questing/universe r-bioc-oligo 1.70.0+ds-2 (tar) [178 kB] 113s Get:3 http://ftpmaster.internal/ubuntu questing/universe r-bioc-oligo 1.70.0+ds-2 (diff) [4724 B] 113s gpgv: Signature made Mon Jan 13 14:20:42 2025 UTC 113s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 113s gpgv: issuer "crusoe@debian.org" 113s gpgv: Can't check signature: No public key 113s dpkg-source: warning: cannot verify inline signature for ./r-bioc-oligo_1.70.0+ds-2.dsc: no acceptable signature found 113s autopkgtest [15:20:55]: testing package r-bioc-oligo version 1.70.0+ds-2 114s autopkgtest [15:20:56]: build not needed 118s autopkgtest [15:21:00]: test pkg-r-autopkgtest: preparing testbed 119s Reading package lists... 119s Building dependency tree... 119s Reading state information... 119s Starting pkgProblemResolver with broken count: 34 119s Starting 2 pkgProblemResolver with broken count: 34 119s Investigating (0) r-cran-tibble:s390x < none -> 3.2.1+dfsg-3 @un puN Ib > 119s Broken r-cran-tibble:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 1.0.2) 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-tibble:s390x 160 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-tibble:s390x 160 119s Investigating (0) r-cran-vctrs:s390x < none -> 0.6.5-1 @un puN Ib > 119s Broken r-cran-vctrs:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 1.1.0) 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-vctrs:s390x 129 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-vctrs:s390x 129 119s Investigating (0) r-cran-htmltools:s390x < none -> 0.5.8.1-1 @un puN Ib > 119s Broken r-cran-htmltools:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 1.0.0) 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-htmltools:s390x 89 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-htmltools:s390x 89 119s Investigating (0) r-cran-shiny:s390x < none -> 1.10.0+dfsg-2 @un puN Ib > 119s Broken r-cran-shiny:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 0.4.10) 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-shiny:s390x 88 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-shiny:s390x 88 119s Investigating (0) r-cran-sass:s390x < none -> 0.4.9+dfsg-1 @un puN Ib > 119s Broken r-cran-sass:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 0.4.10) 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-sass:s390x 85 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-sass:s390x 85 119s Investigating (0) r-cran-bslib:s390x < none -> 0.9.0+dfsg-1syncable1 @un puN Ib > 119s Broken r-cran-bslib:s390x Depends on r-cran-rlang:s390x < none @un pH > 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-bslib:s390x 82 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-bslib:s390x 82 119s Investigating (0) r-cran-lifecycle:s390x < none -> 1.0.4+dfsg-1 @un puN Ib > 119s Broken r-cran-lifecycle:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 1.1.0) 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-lifecycle:s390x 80 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-lifecycle:s390x 80 119s Investigating (0) r-cran-xml2:s390x < none -> 1.3.8-1 @un puN Ib > 119s Broken r-cran-xml2:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 1.1.0) 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-xml2:s390x 77 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-xml2:s390x 77 119s Investigating (0) r-cran-dplyr:s390x < none -> 1.1.4-4 @un puN Ib > 119s Broken r-cran-dplyr:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 1.1.0) 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-dplyr:s390x 71 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-dplyr:s390x 71 119s Investigating (0) r-cran-rsqlite:s390x < none -> 2.3.9-1 @un puN Ib > 119s Broken r-cran-rsqlite:s390x Depends on r-cran-rlang:s390x < none @un pH > 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-rsqlite:s390x 57 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-rsqlite:s390x 57 119s Investigating (0) r-cran-pillar:s390x < none -> 1.10.1+dfsg-1 @un puN Ib > 119s Broken r-cran-pillar:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 1.0.2) 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-pillar:s390x 50 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-pillar:s390x 50 119s Investigating (0) r-cran-fontawesome:s390x < none -> 0.5.3-1 @un puN Ib > 119s Broken r-cran-fontawesome:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 1.0.6) 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-fontawesome:s390x 44 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-fontawesome:s390x 44 119s Investigating (0) r-cran-purrr:s390x < none -> 1.0.4-1 @un puN Ib > 119s Broken r-cran-purrr:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 1.1.1) 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-purrr:s390x 34 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-purrr:s390x 34 119s Investigating (0) r-cran-tidyr:s390x < none -> 1.3.1-1 @un puN Ib > 119s Broken r-cran-tidyr:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 1.1.1) 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-tidyr:s390x 28 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-tidyr:s390x 28 119s Investigating (0) r-cran-hms:s390x < none -> 1.1.3-1 @un puN Ib > 119s Broken r-cran-hms:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 1.0.2) 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-hms:s390x 25 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-hms:s390x 25 119s Investigating (0) r-cran-blob:s390x < none -> 1.2.4-1 @un puN Ib > 119s Broken r-cran-blob:s390x Depends on r-cran-rlang:s390x < none @un pH > 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-blob:s390x 25 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-blob:s390x 25 119s Investigating (0) r-cran-later:s390x < none -> 1.4.1+dfsg-1 @un puN Ib > 119s Broken r-cran-later:s390x Depends on r-cran-rlang:s390x < none @un pH > 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-later:s390x 25 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-later:s390x 25 119s Investigating (0) r-cran-tidyselect:s390x < none -> 1.2.1+dfsg-1 @un puN Ib > 119s Broken r-cran-tidyselect:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 1.0.4) 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-tidyselect:s390x 20 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-tidyselect:s390x 20 119s Investigating (0) r-cran-memoise:s390x < none -> 2.0.1-1 @un puN Ib > 119s Broken r-cran-memoise:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 0.4.10) 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-memoise:s390x 11 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-memoise:s390x 11 119s Investigating (0) r-cran-dbplyr:s390x < none -> 2.5.0+dfsg-1 @un puN Ib > 119s Broken r-cran-dbplyr:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 1.1.1) 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-dbplyr:s390x 11 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-dbplyr:s390x 11 119s Investigating (0) r-cran-cachem:s390x < none -> 1.1.0-1 @un puN Ib > 119s Broken r-cran-cachem:s390x Depends on r-cran-rlang:s390x < none @un pH > 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-cachem:s390x 11 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-cachem:s390x 11 119s Investigating (0) r-cran-promises:s390x < none -> 1.3.2+dfsg-1 @un puN Ib > 119s Broken r-cran-promises:s390x Depends on r-cran-rlang:s390x < none @un pH > 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-promises:s390x 10 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-promises:s390x 10 119s Investigating (0) r-cran-stringr:s390x < none -> 1.5.1-1 @un puN Ib > 119s Broken r-cran-stringr:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 1.0.0) 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-stringr:s390x 8 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-stringr:s390x 8 119s Investigating (0) r-bioc-annotationdbi:s390x < none -> 1.68.0-2 @un puN Ib > 119s Broken r-bioc-annotationdbi:s390x Depends on r-bioc-iranges:s390x < none @un pH > 119s Considering r-bioc-iranges:s390x 3 as a solution to r-bioc-annotationdbi:s390x 6 119s Considering r-bioc-iranges:s390x 3 as a solution to r-bioc-annotationdbi:s390x 6 119s Investigating (0) r-bioc-genomeinfodb:s390x < none -> 1.42.3+dfsg-1 @un puN Ib > 119s Broken r-bioc-genomeinfodb:s390x Depends on r-bioc-iranges:s390x < none @un pH > (>= 2.13.12) 119s Considering r-bioc-iranges:s390x 3 as a solution to r-bioc-genomeinfodb:s390x 5 119s Considering r-bioc-iranges:s390x 3 as a solution to r-bioc-genomeinfodb:s390x 5 119s Investigating (0) r-bioc-xvector:s390x < none -> 0.46.0-2 @un puN Ib > 119s Broken r-bioc-xvector:s390x Depends on r-bioc-iranges:s390x < none @un pH > (>= 2.23.9) 119s Considering r-bioc-iranges:s390x 3 as a solution to r-bioc-xvector:s390x 5 119s Considering r-bioc-iranges:s390x 3 as a solution to r-bioc-xvector:s390x 5 119s Investigating (0) r-bioc-biostrings:s390x < none -> 2.74.1+dfsg-2 @un puN Ib > 119s Broken r-bioc-biostrings:s390x Depends on r-bioc-iranges:s390x < none @un pH > (>= 2.31.2) 119s Considering r-bioc-iranges:s390x 3 as a solution to r-bioc-biostrings:s390x 2 119s Considering r-bioc-iranges:s390x 3 as a solution to r-bioc-biostrings:s390x 2 119s Investigating (0) r-bioc-s4arrays:s390x < none -> 1.6.0+dfsg-2 @un puN Ib > 119s Broken r-bioc-s4arrays:s390x Depends on r-bioc-iranges:s390x < none @un pH > 119s Considering r-bioc-iranges:s390x 3 as a solution to r-bioc-s4arrays:s390x 2 119s Considering r-bioc-iranges:s390x 3 as a solution to r-bioc-s4arrays:s390x 2 119s Investigating (0) r-bioc-genomicranges:s390x < none -> 1.58.0+dfsg-2 @un puN Ib > 119s Broken r-bioc-genomicranges:s390x Depends on r-bioc-iranges:s390x < none @un pH > (>= 2.37.1) 119s Considering r-bioc-iranges:s390x 3 as a solution to r-bioc-genomicranges:s390x 1 119s Considering r-bioc-iranges:s390x 3 as a solution to r-bioc-genomicranges:s390x 1 119s Investigating (0) r-cran-httr2:s390x < none -> 1.1.1-1 @un puN Ib > 119s Broken r-cran-httr2:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 1.1.0) 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-httr2:s390x 1 119s Considering r-cran-rlang:s390x 11 as a solution to r-cran-httr2:s390x 1 119s Investigating (0) r-bioc-oligoclasses:s390x < none -> 1.68.0-2 @un puN Ib > 119s Broken r-bioc-oligoclasses:s390x Depends on r-bioc-iranges:s390x < none @un pH > (>= 2.5.17) 119s Considering r-bioc-iranges:s390x 3 as a solution to r-bioc-oligoclasses:s390x 0 119s Considering r-bioc-iranges:s390x 3 as a solution to r-bioc-oligoclasses:s390x 0 119s Investigating (0) r-bioc-delayedarray:s390x < none -> 0.32.0+dfsg-2 @un puN Ib > 119s Broken r-bioc-delayedarray:s390x Depends on r-bioc-iranges:s390x < none @un pH > (>= 2.17.3) 119s Considering r-bioc-iranges:s390x 3 as a solution to r-bioc-delayedarray:s390x 0 119s Considering r-bioc-iranges:s390x 3 as a solution to r-bioc-delayedarray:s390x 0 119s Investigating (0) r-bioc-summarizedexperiment:s390x < none -> 1.36.0+dfsg-2 @un puN Ib > 119s Broken r-bioc-summarizedexperiment:s390x Depends on r-bioc-iranges:s390x < none @un pH > (>= 2.23.9) 119s Considering r-bioc-iranges:s390x 3 as a solution to r-bioc-summarizedexperiment:s390x 0 119s Considering r-bioc-iranges:s390x 3 as a solution to r-bioc-summarizedexperiment:s390x 0 119s Investigating (0) r-bioc-sparsearray:s390x < none -> 1.6.2+dfsg-1 @un puN Ib > 119s Broken r-bioc-sparsearray:s390x Depends on r-bioc-iranges:s390x < none @un pH > 119s Considering r-bioc-iranges:s390x 3 as a solution to r-bioc-sparsearray:s390x 0 119s Considering r-bioc-iranges:s390x 3 as a solution to r-bioc-sparsearray:s390x 0 119s Done 119s Some packages could not be installed. This may mean that you have 119s requested an impossible situation or if you are using the unstable 119s distribution that some required packages have not yet been created 119s or been moved out of Incoming. 119s The following information may help to resolve the situation: 119s 119s The following packages have unmet dependencies: 119s r-bioc-annotationdbi : Depends: r-bioc-iranges but it is not installable 119s r-bioc-biostrings : Depends: r-bioc-iranges (>= 2.31.2) but it is not installable 119s r-bioc-delayedarray : Depends: r-bioc-iranges (>= 2.17.3) but it is not installable 119s r-bioc-genomeinfodb : Depends: r-bioc-iranges (>= 2.13.12) but it is not installable 119s r-bioc-genomicranges : Depends: r-bioc-iranges (>= 2.37.1) but it is not installable 119s r-bioc-oligoclasses : Depends: r-bioc-iranges (>= 2.5.17) but it is not installable 119s r-bioc-s4arrays : Depends: r-bioc-iranges but it is not installable 119s r-bioc-sparsearray : Depends: r-bioc-iranges but it is not installable 119s r-bioc-summarizedexperiment : Depends: r-bioc-iranges (>= 2.23.9) but it is not installable 119s r-bioc-xvector : Depends: r-bioc-iranges (>= 2.23.9) but it is not installable 119s r-cran-blob : Depends: r-cran-rlang but it is not installable 119s r-cran-bslib : Depends: r-cran-rlang but it is not installable 119s r-cran-cachem : Depends: r-cran-rlang but it is not installable 119s r-cran-dbplyr : Depends: r-cran-rlang (>= 1.1.1) but it is not installable 119s r-cran-dplyr : Depends: r-cran-rlang (>= 1.1.0) but it is not installable 119s r-cran-fontawesome : Depends: r-cran-rlang (>= 1.0.6) but it is not installable 119s r-cran-hms : Depends: r-cran-rlang (>= 1.0.2) but it is not installable 119s r-cran-htmltools : Depends: r-cran-rlang (>= 1.0.0) but it is not installable 119s r-cran-httr2 : Depends: r-cran-rlang (>= 1.1.0) but it is not installable 119s r-cran-later : Depends: r-cran-rlang but it is not installable 119s r-cran-lifecycle : Depends: r-cran-rlang (>= 1.1.0) but it is not installable 119s r-cran-memoise : Depends: r-cran-rlang (>= 0.4.10) but it is not installable 119s r-cran-pillar : Depends: r-cran-rlang (>= 1.0.2) but it is not installable 119s r-cran-promises : Depends: r-cran-rlang but it is not installable 119s r-cran-purrr : Depends: r-cran-rlang (>= 1.1.1) but it is not installable 119s r-cran-rsqlite : Depends: r-cran-rlang but it is not installable 119s r-cran-sass : Depends: r-cran-rlang (>= 0.4.10) but it is not installable 119s r-cran-shiny : Depends: r-cran-rlang (>= 0.4.10) but it is not installable 119s r-cran-stringr : Depends: r-cran-rlang (>= 1.0.0) but it is not installable 119s r-cran-tibble : Depends: r-cran-rlang (>= 1.0.2) but it is not installable 119s r-cran-tidyr : Depends: r-cran-rlang (>= 1.1.1) but it is not installable 119s r-cran-tidyselect : Depends: r-cran-rlang (>= 1.0.4) but it is not installable 119s r-cran-vctrs : Depends: r-cran-rlang (>= 1.1.0) but it is not installable 119s r-cran-xml2 : Depends: r-cran-rlang (>= 1.1.0) but it is not installable 119s E: Unable to correct problems, you have held broken packages. 119s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from questing-proposed 119s Reading package lists... 120s Building dependency tree... 120s Reading state information... 120s Starting pkgProblemResolver with broken count: 0 120s Starting 2 pkgProblemResolver with broken count: 0 120s Done 120s The following NEW packages will be installed: 120s build-essential cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu 120s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 120s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 120s g++ g++-14 g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14 120s gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-14 120s gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools 120s javascript-common libasan8 libbibtex-parser-perl libblas-dev libblas3 120s libbz2-dev libcairo2 libcc1-0 libdatrie1 libdeflate-dev libdeflate0 120s libfontconfig1 libfreetype6 libgcc-14-dev libgfortran-14-dev libgfortran5 120s libgomp1 libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl 120s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 120s libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 120s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 120s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 120s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 120s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 120s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblua5.4-0 120s liblzma-dev libmpc3 libmpfi0 libncurses-dev libpango-1.0-0 120s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libpcre2-16-0 120s libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 120s libpng-dev libpotrace0 libptexenc1 libreadline-dev libsharpyuv0 libsm6 120s libstdc++-14-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data 120s libthai0 libtiff6 libtirpc-dev libtk8.6 libubsan1 libwebp7 libxaw7 120s libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1 120s libxss1 libxt6t64 libzstd-dev libzzip-0-13t64 littler node-bootstrap-sass 120s node-html5shiv node-normalize.css pandoc pandoc-data pkg-r-autopkgtest 120s pkgconf pkgconf-bin r-base-core r-base-dev r-bioc-affxparser r-bioc-affyio 120s r-bioc-annotate r-bioc-annotationdbi r-bioc-biobase r-bioc-biocfilecache 120s r-bioc-biocgenerics r-bioc-biocstyle r-bioc-biocversion r-bioc-biomart 120s r-bioc-biostrings r-bioc-delayedarray r-bioc-genefilter r-bioc-genomeinfodb 120s r-bioc-genomeinfodbdata r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest 120s r-bioc-limma r-bioc-matrixgenerics r-bioc-oligo r-bioc-oligoclasses 120s r-bioc-preprocesscore r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 120s r-bioc-summarizedexperiment r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc 120s r-cran-abind r-cran-askpass r-cran-base64enc r-cran-biocmanager r-cran-bit 120s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-bslib 120s r-cran-cachem r-cran-cli r-cran-codetools r-cran-commonmark r-cran-cpp11 120s r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-digest 120s r-cran-dplyr r-cran-evaluate r-cran-fansi r-cran-fastmap r-cran-ff 120s r-cran-filelock r-cran-fontawesome r-cran-foreach r-cran-fs r-cran-generics 120s r-cran-glue r-cran-highr r-cran-hms r-cran-htmltools r-cran-httpuv 120s r-cran-httr r-cran-httr2 r-cran-iterators r-cran-jquerylib r-cran-jsonlite 120s r-cran-knitr r-cran-later r-cran-lattice r-cran-lifecycle r-cran-littler 120s r-cran-magrittr r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mime 120s r-cran-openssl r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr 120s r-cran-png r-cran-prettyunits r-cran-progress r-cran-promises r-cran-purrr 120s r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl 120s r-cran-rlang r-cran-rmarkdown r-cran-rsqlite r-cran-runit r-cran-sass 120s r-cran-shiny r-cran-sourcetools r-cran-statmod r-cran-stringi r-cran-stringr 120s r-cran-survival r-cran-sys r-cran-tibble r-cran-tidyr r-cran-tidyselect 120s r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-withr r-cran-xfun r-cran-xml 120s r-cran-xml2 r-cran-xtable r-cran-yaml t1utils tex-common texlive-base 120s texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common 120s xdg-utils zip zlib1g-dev 120s The following packages will be upgraded: 120s gcc-14-base gcc-15-base libatomic1 libgcc-s1 libstdc++6 libtirpc-common 120s libtirpc3t64 libzstd1 zstd 120s 9 upgraded, 266 newly installed, 0 to remove and 94 not upgraded. 120s Need to get 428 MB of archives. 120s After this operation, 1265 MB of additional disk space will be used. 120s Get:1 http://ftpmaster.internal/ubuntu questing-proposed/main s390x gcc-15-base s390x 15.1.0-1ubuntu1 [54.5 kB] 121s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libgcc-s1 s390x 15.1.0-1ubuntu1 [35.7 kB] 121s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libatomic1 s390x 15.1.0-1ubuntu1 [9566 B] 121s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libstdc++6 s390x 15.1.0-1ubuntu1 [907 kB] 121s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libzstd1 s390x 1.5.7+dfsg-1 [345 kB] 121s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main s390x gcc-14-base s390x 14.2.0-22ubuntu1 [55.1 kB] 121s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libtirpc-common all 1.3.6+ds-1 [8198 B] 121s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libtirpc3t64 s390x 1.3.6+ds-1 [84.9 kB] 121s Get:9 http://ftpmaster.internal/ubuntu questing/main s390x libisl23 s390x 0.27-1 [704 kB] 122s Get:10 http://ftpmaster.internal/ubuntu questing/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB] 122s Get:11 http://ftpmaster.internal/ubuntu questing-proposed/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-22ubuntu1 [9570 kB] 124s Get:12 http://ftpmaster.internal/ubuntu questing-proposed/main s390x cpp-14 s390x 14.2.0-22ubuntu1 [1028 B] 124s Get:13 http://ftpmaster.internal/ubuntu questing/main s390x cpp-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [5556 B] 124s Get:14 http://ftpmaster.internal/ubuntu questing/main s390x cpp s390x 4:14.2.0-1ubuntu1 [22.4 kB] 124s Get:15 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libcc1-0 s390x 15.1.0-1ubuntu1 [49.8 kB] 124s Get:16 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libgomp1 s390x 15.1.0-1ubuntu1 [153 kB] 124s Get:17 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libitm1 s390x 15.1.0-1ubuntu1 [31.1 kB] 124s Get:18 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libasan8 s390x 15.1.0-1ubuntu1 [2971 kB] 124s Get:19 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libubsan1 s390x 15.1.0-1ubuntu1 [1211 kB] 124s Get:20 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libgcc-14-dev s390x 14.2.0-22ubuntu1 [1037 kB] 124s Get:21 http://ftpmaster.internal/ubuntu questing-proposed/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-22ubuntu1 [18.7 MB] 125s Get:22 http://ftpmaster.internal/ubuntu questing-proposed/main s390x gcc-14 s390x 14.2.0-22ubuntu1 [536 kB] 125s Get:23 http://ftpmaster.internal/ubuntu questing/main s390x gcc-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1204 B] 125s Get:24 http://ftpmaster.internal/ubuntu questing/main s390x gcc s390x 4:14.2.0-1ubuntu1 [5004 B] 125s Get:25 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libstdc++-14-dev s390x 14.2.0-22ubuntu1 [2961 kB] 125s Get:26 http://ftpmaster.internal/ubuntu questing-proposed/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-22ubuntu1 [11.0 MB] 126s Get:27 http://ftpmaster.internal/ubuntu questing-proposed/main s390x g++-14 s390x 14.2.0-22ubuntu1 [24.0 kB] 126s Get:28 http://ftpmaster.internal/ubuntu questing/main s390x g++-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [956 B] 126s Get:29 http://ftpmaster.internal/ubuntu questing/main s390x g++ s390x 4:14.2.0-1ubuntu1 [1080 B] 126s Get:30 http://ftpmaster.internal/ubuntu questing/main s390x build-essential s390x 12.12ubuntu1 [5090 B] 126s Get:31 http://ftpmaster.internal/ubuntu questing/main s390x dctrl-tools s390x 2.24-3build3 [106 kB] 126s Get:32 http://ftpmaster.internal/ubuntu questing/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB] 126s Get:33 http://ftpmaster.internal/ubuntu questing/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 126s Get:34 http://ftpmaster.internal/ubuntu questing/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 126s Get:35 http://ftpmaster.internal/ubuntu questing/main s390x fontconfig-config s390x 2.15.0-2.2ubuntu1 [37.9 kB] 126s Get:36 http://ftpmaster.internal/ubuntu questing/main s390x libfontconfig1 s390x 2.15.0-2.2ubuntu1 [150 kB] 126s Get:37 http://ftpmaster.internal/ubuntu questing/main s390x fontconfig s390x 2.15.0-2.2ubuntu1 [191 kB] 126s Get:38 http://ftpmaster.internal/ubuntu questing/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 126s Get:39 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-4 [119 kB] 126s Get:40 http://ftpmaster.internal/ubuntu questing/universe s390x fonts-lmodern all 2.005-1 [4799 kB] 126s Get:41 http://ftpmaster.internal/ubuntu questing/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 126s Get:42 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libgfortran5 s390x 15.1.0-1ubuntu1 [614 kB] 126s Get:43 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libgfortran-14-dev s390x 14.2.0-22ubuntu1 [653 kB] 126s Get:44 http://ftpmaster.internal/ubuntu questing-proposed/main s390x gfortran-14-s390x-linux-gnu s390x 14.2.0-22ubuntu1 [10.3 MB] 126s Get:45 http://ftpmaster.internal/ubuntu questing-proposed/main s390x gfortran-14 s390x 14.2.0-22ubuntu1 [14.4 kB] 126s Get:46 http://ftpmaster.internal/ubuntu questing/main s390x gfortran-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1012 B] 126s Get:47 http://ftpmaster.internal/ubuntu questing/main s390x gfortran s390x 4:14.2.0-1ubuntu1 [1160 B] 126s Get:48 http://ftpmaster.internal/ubuntu questing/main s390x icu-devtools s390x 76.1-1ubuntu2 [225 kB] 126s Get:49 http://ftpmaster.internal/ubuntu questing/main s390x javascript-common all 12 [5216 B] 126s Get:50 http://ftpmaster.internal/ubuntu questing/main s390x libio-string-perl all 1.08-4 [11.1 kB] 126s Get:51 http://ftpmaster.internal/ubuntu questing/universe s390x liblatex-tounicode-perl all 0.55-1 [28.8 kB] 126s Get:52 http://ftpmaster.internal/ubuntu questing/universe s390x libbibtex-parser-perl all 1.05+dfsg-1 [16.5 kB] 126s Get:53 http://ftpmaster.internal/ubuntu questing/main s390x libblas3 s390x 3.12.1-2 [252 kB] 126s Get:54 http://ftpmaster.internal/ubuntu questing/main s390x libblas-dev s390x 3.12.1-2 [254 kB] 126s Get:55 http://ftpmaster.internal/ubuntu questing/main s390x libbz2-dev s390x 1.0.8-6 [39.1 kB] 126s Get:56 http://ftpmaster.internal/ubuntu questing/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB] 126s Get:57 http://ftpmaster.internal/ubuntu questing/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB] 126s Get:58 http://ftpmaster.internal/ubuntu questing/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B] 126s Get:59 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libxrender1 s390x 1:0.9.12-1 [20.9 kB] 126s Get:60 http://ftpmaster.internal/ubuntu questing/main s390x libcairo2 s390x 1.18.4-1 [580 kB] 126s Get:61 http://ftpmaster.internal/ubuntu questing/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB] 126s Get:62 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libdeflate0 s390x 1.23-2 [46.0 kB] 126s Get:63 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libdeflate-dev s390x 1.23-2 [51.9 kB] 126s Get:64 http://ftpmaster.internal/ubuntu questing/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB] 126s Get:65 http://ftpmaster.internal/ubuntu questing/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB] 127s Get:66 http://ftpmaster.internal/ubuntu questing/main s390x x11-common all 1:7.7+23ubuntu4 [21.8 kB] 127s Get:67 http://ftpmaster.internal/ubuntu questing/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB] 127s Get:68 http://ftpmaster.internal/ubuntu questing/main s390x libicu-dev s390x 76.1-1ubuntu2 [12.2 MB] 127s Get:69 http://ftpmaster.internal/ubuntu questing/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB] 127s Get:70 http://ftpmaster.internal/ubuntu questing/main s390x libjpeg-turbo8-dev s390x 2.1.5-3ubuntu2 [281 kB] 127s Get:71 http://ftpmaster.internal/ubuntu questing/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 127s Get:72 http://ftpmaster.internal/ubuntu questing/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B] 127s Get:73 http://ftpmaster.internal/ubuntu questing/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B] 127s Get:74 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x libjs-bootstrap all 3.4.1+dfsg-4 [129 kB] 127s Get:75 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 127s Get:76 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB] 127s Get:77 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-d3 all 3.5.17-4 [132 kB] 127s Get:78 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-es5-shim all 4.6.7-2 [39.8 kB] 127s Get:79 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 127s Get:80 http://ftpmaster.internal/ubuntu questing/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 127s Get:81 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 127s Get:82 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 127s Get:83 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 127s Get:84 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 127s Get:85 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 127s Get:86 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 127s Get:87 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 127s Get:88 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 127s Get:89 http://ftpmaster.internal/ubuntu questing/universe s390x libkpathsea6 s390x 2024.20240313.70630+ds-6 [67.0 kB] 127s Get:90 http://ftpmaster.internal/ubuntu questing/main s390x liblapack3 s390x 3.12.1-2 [2971 kB] 127s Get:91 http://ftpmaster.internal/ubuntu questing/main s390x liblapack-dev s390x 3.12.1-2 [5967 kB] 127s Get:92 http://ftpmaster.internal/ubuntu questing/main s390x liblua5.4-0 s390x 5.4.7-1 [174 kB] 127s Get:93 http://ftpmaster.internal/ubuntu questing/universe s390x libmpfi0 s390x 1.5.4+ds-4 [34.1 kB] 127s Get:94 http://ftpmaster.internal/ubuntu questing/main s390x libncurses-dev s390x 6.5+20250216-2 [407 kB] 127s Get:95 http://ftpmaster.internal/ubuntu questing/main s390x libthai-data all 0.1.29-2build1 [158 kB] 127s Get:96 http://ftpmaster.internal/ubuntu questing/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB] 127s Get:97 http://ftpmaster.internal/ubuntu questing/main s390x libpango-1.0-0 s390x 1.56.3-1 [254 kB] 127s Get:98 http://ftpmaster.internal/ubuntu questing/main s390x libpangoft2-1.0-0 s390x 1.56.3-1 [50.5 kB] 127s Get:99 http://ftpmaster.internal/ubuntu questing/main s390x libpangocairo-1.0-0 s390x 1.56.3-1 [28.2 kB] 127s Get:100 http://ftpmaster.internal/ubuntu questing/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB] 127s Get:101 http://ftpmaster.internal/ubuntu questing/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB] 128s Get:102 http://ftpmaster.internal/ubuntu questing/main s390x libpcre2-16-0 s390x 10.45-1 [259 kB] 128s Get:103 http://ftpmaster.internal/ubuntu questing/main s390x libpcre2-32-0 s390x 10.45-1 [245 kB] 128s Get:104 http://ftpmaster.internal/ubuntu questing/main s390x libpcre2-posix3 s390x 10.45-1 [7080 B] 128s Get:105 http://ftpmaster.internal/ubuntu questing/main s390x libpcre2-dev s390x 10.45-1 [899 kB] 128s Get:106 http://ftpmaster.internal/ubuntu questing/main s390x libpkgconf3 s390x 1.8.1-4 [31.2 kB] 129s Get:107 http://ftpmaster.internal/ubuntu questing/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB] 129s Get:108 http://ftpmaster.internal/ubuntu questing/main s390x libpng-dev s390x 1.6.47-1.1 [278 kB] 129s Get:109 http://ftpmaster.internal/ubuntu questing/universe s390x libpotrace0 s390x 1.16-2build1 [18.7 kB] 129s Get:110 http://ftpmaster.internal/ubuntu questing/universe s390x libptexenc1 s390x 2024.20240313.70630+ds-6 [43.4 kB] 129s Get:111 http://ftpmaster.internal/ubuntu questing/main s390x libreadline-dev s390x 8.2-6 [187 kB] 129s Get:112 http://ftpmaster.internal/ubuntu questing/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB] 129s Get:113 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libsm6 s390x 2:1.2.6-1 [18.3 kB] 129s Get:114 http://ftpmaster.internal/ubuntu questing/universe s390x libsynctex2 s390x 2024.20240313.70630+ds-6 [64.8 kB] 129s Get:115 http://ftpmaster.internal/ubuntu questing/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB] 129s Get:116 http://ftpmaster.internal/ubuntu questing/universe s390x libteckit0 s390x 2.5.12+ds1-1 [433 kB] 130s Get:117 http://ftpmaster.internal/ubuntu questing/universe s390x libtexlua53-5 s390x 2024.20240313.70630+ds-6 [131 kB] 130s Get:118 http://ftpmaster.internal/ubuntu questing/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB] 130s Get:119 http://ftpmaster.internal/ubuntu questing/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB] 130s Get:120 http://ftpmaster.internal/ubuntu questing/main s390x libtiff6 s390x 4.7.0-3ubuntu1 [219 kB] 130s Get:121 http://ftpmaster.internal/ubuntu questing/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB] 130s Get:122 http://ftpmaster.internal/ubuntu questing/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B] 130s Get:123 http://ftpmaster.internal/ubuntu questing/main s390x libtk8.6 s390x 8.6.16-1 [830 kB] 130s Get:124 http://ftpmaster.internal/ubuntu questing/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB] 130s Get:125 http://ftpmaster.internal/ubuntu questing/main s390x libxmu6 s390x 2:1.1.3-3build2 [53.0 kB] 130s Get:126 http://ftpmaster.internal/ubuntu questing/main s390x libxpm4 s390x 1:3.5.17-1build2 [41.2 kB] 130s Get:127 http://ftpmaster.internal/ubuntu questing/main s390x libxaw7 s390x 2:1.0.16-1 [201 kB] 130s Get:128 http://ftpmaster.internal/ubuntu questing/main s390x libxi6 s390x 2:1.8.2-1 [35.4 kB] 130s Get:129 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libzstd-dev s390x 1.5.7+dfsg-1 [415 kB] 130s Get:130 http://ftpmaster.internal/ubuntu questing/universe s390x libzzip-0-13t64 s390x 0.13.78+dfsg.1-0.1 [29.8 kB] 130s Get:131 http://ftpmaster.internal/ubuntu questing/main s390x zip s390x 3.0-14ubuntu2 [187 kB] 130s Get:132 http://ftpmaster.internal/ubuntu questing/main s390x unzip s390x 6.0-28ubuntu6 [186 kB] 130s Get:133 http://ftpmaster.internal/ubuntu questing/main s390x xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 130s Get:134 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x r-base-core s390x 4.5.0-3 [29.0 MB] 138s Get:135 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x r-cran-littler s390x 0.3.21-1 [97.4 kB] 138s Get:136 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x littler all 0.3.21-1 [2584 B] 138s Get:137 http://ftpmaster.internal/ubuntu questing/universe s390x node-bootstrap-sass all 3.4.3-2 [187 kB] 138s Get:138 http://ftpmaster.internal/ubuntu questing/universe s390x node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 138s Get:139 http://ftpmaster.internal/ubuntu questing/universe s390x node-normalize.css all 8.0.1-5 [10.8 kB] 138s Get:140 http://ftpmaster.internal/ubuntu questing/universe s390x pandoc-data all 3.1.11.1-3build1 [78.8 kB] 138s Get:141 http://ftpmaster.internal/ubuntu questing/universe s390x pandoc s390x 3.1.11.1+ds-2 [52.5 MB] 149s Get:142 http://ftpmaster.internal/ubuntu questing/main s390x liblzma-dev s390x 5.6.4-1ubuntu1 [184 kB] 149s Get:143 http://ftpmaster.internal/ubuntu questing/main s390x pkgconf-bin s390x 1.8.1-4 [21.5 kB] 149s Get:144 http://ftpmaster.internal/ubuntu questing/main s390x pkgconf s390x 1.8.1-4 [16.7 kB] 149s Get:145 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libtirpc-dev s390x 1.3.6+ds-1 [196 kB] 149s Get:146 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x r-base-dev all 4.5.0-3 [4188 B] 149s Get:147 http://ftpmaster.internal/ubuntu questing/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 149s Get:148 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-biocgenerics all 0.52.0-2 [624 kB] 149s Get:149 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x r-bioc-affxparser s390x 1.78.0-3 [1036 kB] 149s Get:150 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 149s Get:151 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-affyio s390x 1.76.0-2 [98.5 kB] 149s Get:152 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-biobase s390x 2.66.0-2 [2339 kB] 149s Get:153 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-s4vectors s390x 0.44.0+dfsg-2 [2063 kB] 149s Get:154 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x r-bioc-iranges s390x 2.40.1-3 [2300 kB] 150s Get:155 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-dbi all 1.2.3-1 [853 kB] 150s Get:156 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-bit s390x 4.6.0+dfsg-1 [471 kB] 150s Get:157 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-bit64 s390x 4.6.0-1-1ubuntu2 [503 kB] 150s Get:158 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x r-cran-rlang s390x 1.1.5-3 [1711 kB] 151s Get:159 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-cli s390x 3.6.4-1 [1379 kB] 151s Get:160 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-glue s390x 1.8.0-1 [164 kB] 151s Get:161 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 151s Get:162 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB] 151s Get:163 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-blob all 1.2.4-1 [49.8 kB] 151s Get:164 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-fastmap s390x 1.2.0-1 [72.4 kB] 151s Get:165 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-cachem s390x 1.1.0-1 [74.0 kB] 151s Get:166 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-memoise all 2.0.1-1 [53.9 kB] 151s Get:167 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 151s Get:168 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-plogr all 0.2.0-3build1 [15.1 kB] 151s Get:169 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-cpp11 all 0.5.2-1 [233 kB] 151s Get:170 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-rsqlite s390x 2.3.9-1 [1331 kB] 151s Get:171 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-curl s390x 6.2.1+dfsg-1ubuntu1 [196 kB] 151s Get:172 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-jsonlite s390x 1.9.1+dfsg-1 [447 kB] 152s Get:173 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-mime s390x 0.12-2 [35.8 kB] 152s Get:174 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-sys s390x 3.4.3-1 [45.2 kB] 152s Get:175 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-askpass s390x 1.2.1-1 [24.8 kB] 152s Get:176 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-openssl s390x 2.3.2+dfsg-1 [406 kB] 152s Get:177 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-r6 all 2.6.1-1 [101 kB] 152s Get:178 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-httr all 1.4.7+dfsg-1 [459 kB] 152s Get:179 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-png s390x 0.1-8-1build2 [41.5 kB] 152s Get:180 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-xvector s390x 0.46.0-2 [624 kB] 152s Get:181 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 152s Get:182 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 155s Get:183 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 155s Get:184 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-crayon all 1.5.3-1 [165 kB] 155s Get:185 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-biostrings s390x 2.74.1+dfsg-2 [13.3 MB] 158s Get:186 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x r-bioc-keggrest all 1.46.0+dfsg-3 [183 kB] 158s Get:187 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-annotationdbi all 1.68.0-2 [4857 kB] 159s Get:188 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-xml s390x 3.99-0.18-1 [1744 kB] 159s Get:189 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-xtable all 1:1.8-4-2 [689 kB] 159s Get:190 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-annotate all 1.84.0+dfsg-2 [1870 kB] 160s Get:191 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-generics all 0.1.3-1 [81.3 kB] 160s Get:192 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB] 160s Get:193 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB] 160s Get:194 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 160s Get:195 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-fansi s390x 1.0.6-1ubuntu1 [625 kB] 160s Get:196 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-tibble s390x 3.2.1+dfsg-3 [420 kB] 160s Get:197 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-withr all 3.0.2+dfsg-1 [214 kB] 160s Get:198 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-tidyselect s390x 1.2.1+dfsg-1 [222 kB] 160s Get:199 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-dplyr s390x 1.1.4-4 [1537 kB] 160s Get:200 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-purrr s390x 1.0.4-1 [553 kB] 161s Get:201 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-stringi s390x 1.8.4-1build1 [917 kB] 161s Get:202 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-stringr all 1.5.1-1 [290 kB] 161s Get:203 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-tidyr s390x 1.3.1-1 [1157 kB] 162s Get:204 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-dbplyr all 2.5.0+dfsg-1 [1233 kB] 162s Get:205 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-filelock s390x 1.0.3-1 [29.2 kB] 162s Get:206 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-biocfilecache all 2.14.0+dfsg-2 [300 kB] 162s Get:207 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-base64enc s390x 0.1-3-3 [28.0 kB] 162s Get:208 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-digest s390x 0.6.37-1 [205 kB] 162s Get:209 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-htmltools s390x 0.5.8.1-1 [372 kB] 162s Get:210 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-evaluate all 1.0.3-1 [114 kB] 162s Get:211 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-xfun s390x 0.51+dfsg-1 [574 kB] 162s Get:212 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-highr all 0.11+dfsg-1 [38.5 kB] 162s Get:213 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-yaml s390x 2.3.10-1 [113 kB] 162s Get:214 http://ftpmaster.internal/ubuntu questing/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 164s Get:215 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-knitr all 1.50+dfsg-1 [840 kB] 164s Get:216 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 164s Get:217 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-fs s390x 1.6.5+dfsg-1 [245 kB] 164s Get:218 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-rappdirs s390x 0.3.3-1 [47.5 kB] 164s Get:219 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-sass s390x 0.4.9+dfsg-1 [1019 kB] 164s Get:220 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x r-cran-bslib all 0.9.0+dfsg-3 [4562 kB] 165s Get:221 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-fontawesome all 0.5.3-1 [1331 kB] 165s Get:222 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-tinytex all 0.56-1 [148 kB] 165s Get:223 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-modernizr all 3.13.0-0.1 [101 kB] 165s Get:224 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 165s Get:225 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-rcpp s390x 1.0.14-1 [2003 kB] 165s Get:226 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-later s390x 1.4.1+dfsg-1 [148 kB] 165s Get:227 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-promises s390x 1.3.2+dfsg-1 [296 kB] 165s Get:228 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-httpuv s390x 1.6.15+dfsg-1 [507 kB] 165s Get:229 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-sourcetools s390x 0.1.7-1-1 [47.1 kB] 165s Get:230 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-commonmark s390x 1.9.5-1 [142 kB] 165s Get:231 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 165s Get:232 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 166s Get:233 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 166s Get:234 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-bookdown all 0.42+dfsg-1 [1409 kB] 166s Get:235 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 166s Get:236 http://ftpmaster.internal/ubuntu questing/universe s390x tex-common all 6.19 [29.8 kB] 166s Get:237 http://ftpmaster.internal/ubuntu questing/main s390x t1utils s390x 1.41-4build3 [65.6 kB] 166s Get:238 http://ftpmaster.internal/ubuntu questing/universe s390x texlive-binaries s390x 2024.20240313.70630+ds-6 [9170 kB] 167s Get:239 http://ftpmaster.internal/ubuntu questing/universe s390x texlive-base all 2024.20250309-1 [22.7 MB] 171s Get:240 http://ftpmaster.internal/ubuntu questing/universe s390x texlive-latex-base all 2024.20250309-1 [1276 kB] 171s Get:241 http://ftpmaster.internal/ubuntu questing/universe s390x texlive-bibtex-extra all 2024.20250309-2 [79.3 MB] 184s Get:242 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-biocversion all 3.20.0-2 [11.1 kB] 184s Get:243 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-biocstyle all 2.34.0+dfsg-1 [451 kB] 184s Get:244 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-hms all 1.1.3-1 [96.5 kB] 184s Get:245 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-prettyunits all 1.2.0-1 [162 kB] 184s Get:246 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-progress all 1.2.3-1 [91.9 kB] 184s Get:247 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-httr2 all 1.1.1-1 [752 kB] 184s Get:248 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-xml2 s390x 1.3.8-1 [327 kB] 184s Get:249 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-biomart all 2.62.1+dfsg-1 [444 kB] 184s Get:250 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x r-cran-lattice s390x 0.22-7-1 [1365 kB] 184s Get:251 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-matrix s390x 1.7-3-1 [4449 kB] 184s Get:252 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-matrixstats s390x 1.5.0-1 [539 kB] 185s Get:253 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 185s Get:254 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-abind all 1.4-8-1 [66.9 kB] 185s Get:255 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-s4arrays s390x 1.6.0+dfsg-2 [700 kB] 185s Get:256 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-sparsearray s390x 1.6.2+dfsg-1 [1386 kB] 185s Get:257 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-delayedarray s390x 0.32.0+dfsg-2 [2068 kB] 185s Get:258 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-survival s390x 3.8-3-1 [8250 kB] 186s Get:259 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-genefilter s390x 1.88.0-2 [1239 kB] 186s Get:260 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-genomicranges s390x 1.58.0+dfsg-2 [2087 kB] 186s Get:261 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-statmod s390x 1.5.0-1 [294 kB] 186s Get:262 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-limma s390x 3.62.2+dfsg-1 [1973 kB] 186s Get:263 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 186s Get:264 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-codetools all 0.2-20-1 [90.5 kB] 186s Get:265 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-iterators all 1.0.14-1 [336 kB] 186s Get:266 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-foreach all 1.5.2-1 [124 kB] 186s Get:267 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-ff s390x 4.5.2+ds-1 [1020 kB] 186s Get:268 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-oligoclasses all 1.68.0-2 [1259 kB] 186s Get:269 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-preprocesscore s390x 1.68.0+ds-2 [177 kB] 186s Get:270 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-oligo s390x 1.70.0+ds-2 [923 kB] 186s Get:271 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-bitops s390x 1.0-9-1 [30.1 kB] 186s Get:272 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 186s Get:273 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-rcurl s390x 1.98-1.16+dfsg-1 [808 kB] 187s Get:274 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-runit all 0.4.33-1 [377 kB] 187s Get:275 http://ftpmaster.internal/ubuntu questing-proposed/main s390x zstd s390x 1.5.7+dfsg-1 [722 kB] 188s Preconfiguring packages ... 188s Fetched 428 MB in 1min 6s (6442 kB/s) 188s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81470 files and directories currently installed.) 188s Preparing to unpack .../gcc-15-base_15.1.0-1ubuntu1_s390x.deb ... 188s Unpacking gcc-15-base:s390x (15.1.0-1ubuntu1) over (15-20250404-0ubuntu1) ... 188s Setting up gcc-15-base:s390x (15.1.0-1ubuntu1) ... 188s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81470 files and directories currently installed.) 188s Preparing to unpack .../libgcc-s1_15.1.0-1ubuntu1_s390x.deb ... 188s Unpacking libgcc-s1:s390x (15.1.0-1ubuntu1) over (15-20250404-0ubuntu1) ... 188s Setting up libgcc-s1:s390x (15.1.0-1ubuntu1) ... 188s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81470 files and directories currently installed.) 188s Preparing to unpack .../libatomic1_15.1.0-1ubuntu1_s390x.deb ... 188s Unpacking libatomic1:s390x (15.1.0-1ubuntu1) over (15-20250404-0ubuntu1) ... 188s Preparing to unpack .../libstdc++6_15.1.0-1ubuntu1_s390x.deb ... 188s Unpacking libstdc++6:s390x (15.1.0-1ubuntu1) over (15-20250404-0ubuntu1) ... 188s Setting up libstdc++6:s390x (15.1.0-1ubuntu1) ... 188s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81470 files and directories currently installed.) 188s Preparing to unpack .../libzstd1_1.5.7+dfsg-1_s390x.deb ... 188s Unpacking libzstd1:s390x (1.5.7+dfsg-1) over (1.5.6+dfsg-2) ... 188s Setting up libzstd1:s390x (1.5.7+dfsg-1) ... 188s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81470 files and directories currently installed.) 188s Preparing to unpack .../000-gcc-14-base_14.2.0-22ubuntu1_s390x.deb ... 188s Unpacking gcc-14-base:s390x (14.2.0-22ubuntu1) over (14.2.0-19ubuntu2) ... 188s Preparing to unpack .../001-libtirpc-common_1.3.6+ds-1_all.deb ... 188s Unpacking libtirpc-common (1.3.6+ds-1) over (1.3.4+ds-1.3) ... 188s Preparing to unpack .../002-libtirpc3t64_1.3.6+ds-1_s390x.deb ... 188s Unpacking libtirpc3t64:s390x (1.3.6+ds-1) over (1.3.4+ds-1.3) ... 188s Selecting previously unselected package libisl23:s390x. 188s Preparing to unpack .../003-libisl23_0.27-1_s390x.deb ... 188s Unpacking libisl23:s390x (0.27-1) ... 188s Selecting previously unselected package libmpc3:s390x. 188s Preparing to unpack .../004-libmpc3_1.3.1-1build2_s390x.deb ... 188s Unpacking libmpc3:s390x (1.3.1-1build2) ... 188s Selecting previously unselected package cpp-14-s390x-linux-gnu. 188s Preparing to unpack .../005-cpp-14-s390x-linux-gnu_14.2.0-22ubuntu1_s390x.deb ... 188s Unpacking cpp-14-s390x-linux-gnu (14.2.0-22ubuntu1) ... 188s Selecting previously unselected package cpp-14. 188s Preparing to unpack .../006-cpp-14_14.2.0-22ubuntu1_s390x.deb ... 188s Unpacking cpp-14 (14.2.0-22ubuntu1) ... 188s Selecting previously unselected package cpp-s390x-linux-gnu. 188s Preparing to unpack .../007-cpp-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ... 188s Unpacking cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 188s Selecting previously unselected package cpp. 188s Preparing to unpack .../008-cpp_4%3a14.2.0-1ubuntu1_s390x.deb ... 188s Unpacking cpp (4:14.2.0-1ubuntu1) ... 188s Selecting previously unselected package libcc1-0:s390x. 188s Preparing to unpack .../009-libcc1-0_15.1.0-1ubuntu1_s390x.deb ... 188s Unpacking libcc1-0:s390x (15.1.0-1ubuntu1) ... 188s Selecting previously unselected package libgomp1:s390x. 188s Preparing to unpack .../010-libgomp1_15.1.0-1ubuntu1_s390x.deb ... 188s Unpacking libgomp1:s390x (15.1.0-1ubuntu1) ... 188s Selecting previously unselected package libitm1:s390x. 188s Preparing to unpack .../011-libitm1_15.1.0-1ubuntu1_s390x.deb ... 188s Unpacking libitm1:s390x (15.1.0-1ubuntu1) ... 188s Selecting previously unselected package libasan8:s390x. 188s Preparing to unpack .../012-libasan8_15.1.0-1ubuntu1_s390x.deb ... 188s Unpacking libasan8:s390x (15.1.0-1ubuntu1) ... 188s Selecting previously unselected package libubsan1:s390x. 188s Preparing to unpack .../013-libubsan1_15.1.0-1ubuntu1_s390x.deb ... 188s Unpacking libubsan1:s390x (15.1.0-1ubuntu1) ... 188s Selecting previously unselected package libgcc-14-dev:s390x. 188s Preparing to unpack .../014-libgcc-14-dev_14.2.0-22ubuntu1_s390x.deb ... 188s Unpacking libgcc-14-dev:s390x (14.2.0-22ubuntu1) ... 188s Selecting previously unselected package gcc-14-s390x-linux-gnu. 188s Preparing to unpack .../015-gcc-14-s390x-linux-gnu_14.2.0-22ubuntu1_s390x.deb ... 188s Unpacking gcc-14-s390x-linux-gnu (14.2.0-22ubuntu1) ... 189s Selecting previously unselected package gcc-14. 189s Preparing to unpack .../016-gcc-14_14.2.0-22ubuntu1_s390x.deb ... 189s Unpacking gcc-14 (14.2.0-22ubuntu1) ... 189s Selecting previously unselected package gcc-s390x-linux-gnu. 189s Preparing to unpack .../017-gcc-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ... 189s Unpacking gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 189s Selecting previously unselected package gcc. 189s Preparing to unpack .../018-gcc_4%3a14.2.0-1ubuntu1_s390x.deb ... 189s Unpacking gcc (4:14.2.0-1ubuntu1) ... 189s Selecting previously unselected package libstdc++-14-dev:s390x. 189s Preparing to unpack .../019-libstdc++-14-dev_14.2.0-22ubuntu1_s390x.deb ... 189s Unpacking libstdc++-14-dev:s390x (14.2.0-22ubuntu1) ... 189s Selecting previously unselected package g++-14-s390x-linux-gnu. 189s Preparing to unpack .../020-g++-14-s390x-linux-gnu_14.2.0-22ubuntu1_s390x.deb ... 189s Unpacking g++-14-s390x-linux-gnu (14.2.0-22ubuntu1) ... 189s Selecting previously unselected package g++-14. 189s Preparing to unpack .../021-g++-14_14.2.0-22ubuntu1_s390x.deb ... 189s Unpacking g++-14 (14.2.0-22ubuntu1) ... 189s Selecting previously unselected package g++-s390x-linux-gnu. 189s Preparing to unpack .../022-g++-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ... 189s Unpacking g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 189s Selecting previously unselected package g++. 189s Preparing to unpack .../023-g++_4%3a14.2.0-1ubuntu1_s390x.deb ... 189s Unpacking g++ (4:14.2.0-1ubuntu1) ... 189s Selecting previously unselected package build-essential. 189s Preparing to unpack .../024-build-essential_12.12ubuntu1_s390x.deb ... 189s Unpacking build-essential (12.12ubuntu1) ... 189s Selecting previously unselected package dctrl-tools. 189s Preparing to unpack .../025-dctrl-tools_2.24-3build3_s390x.deb ... 189s Unpacking dctrl-tools (2.24-3build3) ... 189s Selecting previously unselected package libfreetype6:s390x. 189s Preparing to unpack .../026-libfreetype6_2.13.3+dfsg-1_s390x.deb ... 189s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ... 189s Selecting previously unselected package fonts-dejavu-mono. 189s Preparing to unpack .../027-fonts-dejavu-mono_2.37-8_all.deb ... 189s Unpacking fonts-dejavu-mono (2.37-8) ... 189s Selecting previously unselected package fonts-dejavu-core. 189s Preparing to unpack .../028-fonts-dejavu-core_2.37-8_all.deb ... 189s Unpacking fonts-dejavu-core (2.37-8) ... 189s Selecting previously unselected package fontconfig-config. 189s Preparing to unpack .../029-fontconfig-config_2.15.0-2.2ubuntu1_s390x.deb ... 189s Unpacking fontconfig-config (2.15.0-2.2ubuntu1) ... 189s Selecting previously unselected package libfontconfig1:s390x. 189s Preparing to unpack .../030-libfontconfig1_2.15.0-2.2ubuntu1_s390x.deb ... 189s Unpacking libfontconfig1:s390x (2.15.0-2.2ubuntu1) ... 189s Selecting previously unselected package fontconfig. 189s Preparing to unpack .../031-fontconfig_2.15.0-2.2ubuntu1_s390x.deb ... 189s Unpacking fontconfig (2.15.0-2.2ubuntu1) ... 189s Selecting previously unselected package fonts-font-awesome. 189s Preparing to unpack .../032-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 189s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 189s Selecting previously unselected package fonts-glyphicons-halflings. 189s Preparing to unpack .../033-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-4_all.deb ... 189s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-4) ... 189s Selecting previously unselected package fonts-lmodern. 189s Preparing to unpack .../034-fonts-lmodern_2.005-1_all.deb ... 189s Unpacking fonts-lmodern (2.005-1) ... 189s Selecting previously unselected package fonts-mathjax. 189s Preparing to unpack .../035-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 189s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 190s Selecting previously unselected package libgfortran5:s390x. 190s Preparing to unpack .../036-libgfortran5_15.1.0-1ubuntu1_s390x.deb ... 190s Unpacking libgfortran5:s390x (15.1.0-1ubuntu1) ... 190s Selecting previously unselected package libgfortran-14-dev:s390x. 190s Preparing to unpack .../037-libgfortran-14-dev_14.2.0-22ubuntu1_s390x.deb ... 190s Unpacking libgfortran-14-dev:s390x (14.2.0-22ubuntu1) ... 190s Selecting previously unselected package gfortran-14-s390x-linux-gnu. 190s Preparing to unpack .../038-gfortran-14-s390x-linux-gnu_14.2.0-22ubuntu1_s390x.deb ... 190s Unpacking gfortran-14-s390x-linux-gnu (14.2.0-22ubuntu1) ... 190s Selecting previously unselected package gfortran-14. 190s Preparing to unpack .../039-gfortran-14_14.2.0-22ubuntu1_s390x.deb ... 190s Unpacking gfortran-14 (14.2.0-22ubuntu1) ... 190s Selecting previously unselected package gfortran-s390x-linux-gnu. 190s Preparing to unpack .../040-gfortran-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ... 190s Unpacking gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 190s Selecting previously unselected package gfortran. 190s Preparing to unpack .../041-gfortran_4%3a14.2.0-1ubuntu1_s390x.deb ... 190s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 190s Selecting previously unselected package icu-devtools. 190s Preparing to unpack .../042-icu-devtools_76.1-1ubuntu2_s390x.deb ... 190s Unpacking icu-devtools (76.1-1ubuntu2) ... 190s Selecting previously unselected package javascript-common. 190s Preparing to unpack .../043-javascript-common_12_all.deb ... 190s Unpacking javascript-common (12) ... 190s Selecting previously unselected package libio-string-perl. 190s Preparing to unpack .../044-libio-string-perl_1.08-4_all.deb ... 190s Unpacking libio-string-perl (1.08-4) ... 190s Selecting previously unselected package liblatex-tounicode-perl. 190s Preparing to unpack .../045-liblatex-tounicode-perl_0.55-1_all.deb ... 190s Unpacking liblatex-tounicode-perl (0.55-1) ... 190s Selecting previously unselected package libbibtex-parser-perl. 190s Preparing to unpack .../046-libbibtex-parser-perl_1.05+dfsg-1_all.deb ... 190s Unpacking libbibtex-parser-perl (1.05+dfsg-1) ... 190s Selecting previously unselected package libblas3:s390x. 190s Preparing to unpack .../047-libblas3_3.12.1-2_s390x.deb ... 190s Unpacking libblas3:s390x (3.12.1-2) ... 190s Selecting previously unselected package libblas-dev:s390x. 190s Preparing to unpack .../048-libblas-dev_3.12.1-2_s390x.deb ... 190s Unpacking libblas-dev:s390x (3.12.1-2) ... 190s Selecting previously unselected package libbz2-dev:s390x. 190s Preparing to unpack .../049-libbz2-dev_1.0.8-6_s390x.deb ... 190s Unpacking libbz2-dev:s390x (1.0.8-6) ... 190s Selecting previously unselected package libpixman-1-0:s390x. 190s Preparing to unpack .../050-libpixman-1-0_0.44.0-3_s390x.deb ... 190s Unpacking libpixman-1-0:s390x (0.44.0-3) ... 190s Selecting previously unselected package libxcb-render0:s390x. 190s Preparing to unpack .../051-libxcb-render0_1.17.0-2_s390x.deb ... 190s Unpacking libxcb-render0:s390x (1.17.0-2) ... 190s Selecting previously unselected package libxcb-shm0:s390x. 190s Preparing to unpack .../052-libxcb-shm0_1.17.0-2_s390x.deb ... 190s Unpacking libxcb-shm0:s390x (1.17.0-2) ... 190s Selecting previously unselected package libxrender1:s390x. 190s Preparing to unpack .../053-libxrender1_1%3a0.9.12-1_s390x.deb ... 190s Unpacking libxrender1:s390x (1:0.9.12-1) ... 190s Selecting previously unselected package libcairo2:s390x. 190s Preparing to unpack .../054-libcairo2_1.18.4-1_s390x.deb ... 190s Unpacking libcairo2:s390x (1.18.4-1) ... 190s Selecting previously unselected package libdatrie1:s390x. 190s Preparing to unpack .../055-libdatrie1_0.2.13-3build1_s390x.deb ... 190s Unpacking libdatrie1:s390x (0.2.13-3build1) ... 190s Selecting previously unselected package libdeflate0:s390x. 190s Preparing to unpack .../056-libdeflate0_1.23-2_s390x.deb ... 190s Unpacking libdeflate0:s390x (1.23-2) ... 190s Selecting previously unselected package libdeflate-dev:s390x. 190s Preparing to unpack .../057-libdeflate-dev_1.23-2_s390x.deb ... 190s Unpacking libdeflate-dev:s390x (1.23-2) ... 190s Selecting previously unselected package libgraphite2-3:s390x. 190s Preparing to unpack .../058-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ... 190s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 190s Selecting previously unselected package libharfbuzz0b:s390x. 190s Preparing to unpack .../059-libharfbuzz0b_10.2.0-1_s390x.deb ... 190s Unpacking libharfbuzz0b:s390x (10.2.0-1) ... 190s Selecting previously unselected package x11-common. 190s Preparing to unpack .../060-x11-common_1%3a7.7+23ubuntu4_all.deb ... 190s Unpacking x11-common (1:7.7+23ubuntu4) ... 190s Selecting previously unselected package libice6:s390x. 190s Preparing to unpack .../061-libice6_2%3a1.1.1-1_s390x.deb ... 190s Unpacking libice6:s390x (2:1.1.1-1) ... 190s Selecting previously unselected package libicu-dev:s390x. 190s Preparing to unpack .../062-libicu-dev_76.1-1ubuntu2_s390x.deb ... 190s Unpacking libicu-dev:s390x (76.1-1ubuntu2) ... 190s Selecting previously unselected package libjpeg-turbo8:s390x. 190s Preparing to unpack .../063-libjpeg-turbo8_2.1.5-3ubuntu2_s390x.deb ... 190s Unpacking libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ... 190s Selecting previously unselected package libjpeg-turbo8-dev:s390x. 190s Preparing to unpack .../064-libjpeg-turbo8-dev_2.1.5-3ubuntu2_s390x.deb ... 190s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ... 190s Selecting previously unselected package libjpeg8:s390x. 190s Preparing to unpack .../065-libjpeg8_8c-2ubuntu11_s390x.deb ... 190s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 190s Selecting previously unselected package libjpeg8-dev:s390x. 190s Preparing to unpack .../066-libjpeg8-dev_8c-2ubuntu11_s390x.deb ... 190s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ... 190s Selecting previously unselected package libjpeg-dev:s390x. 190s Preparing to unpack .../067-libjpeg-dev_8c-2ubuntu11_s390x.deb ... 190s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ... 190s Selecting previously unselected package libjs-bootstrap. 190s Preparing to unpack .../068-libjs-bootstrap_3.4.1+dfsg-4_all.deb ... 190s Unpacking libjs-bootstrap (3.4.1+dfsg-4) ... 190s Selecting previously unselected package libjs-popper.js. 190s Preparing to unpack .../069-libjs-popper.js_1.16.1+ds-6_all.deb ... 190s Unpacking libjs-popper.js (1.16.1+ds-6) ... 190s Selecting previously unselected package libjs-bootstrap4. 190s Preparing to unpack .../070-libjs-bootstrap4_4.6.2+dfsg-1_all.deb ... 190s Unpacking libjs-bootstrap4 (4.6.2+dfsg-1) ... 191s Selecting previously unselected package libjs-d3. 191s Preparing to unpack .../071-libjs-d3_3.5.17-4_all.deb ... 191s Unpacking libjs-d3 (3.5.17-4) ... 191s Selecting previously unselected package libjs-es5-shim. 191s Preparing to unpack .../072-libjs-es5-shim_4.6.7-2_all.deb ... 191s Unpacking libjs-es5-shim (4.6.7-2) ... 191s Selecting previously unselected package libjs-highlight.js. 191s Preparing to unpack .../073-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 191s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 191s Selecting previously unselected package libjs-jquery. 191s Preparing to unpack .../074-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 191s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 191s Selecting previously unselected package libjs-jquery-datatables. 191s Preparing to unpack .../075-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 191s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 191s Selecting previously unselected package libjs-sifter.js. 191s Preparing to unpack .../076-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 191s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 191s Selecting previously unselected package libjs-microplugin.js. 191s Preparing to unpack .../077-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 191s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 191s Selecting previously unselected package libjs-jquery-selectize.js. 191s Preparing to unpack .../078-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 191s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 191s Selecting previously unselected package libjs-jquery-ui. 191s Preparing to unpack .../079-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 191s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 191s Selecting previously unselected package libjs-json. 191s Preparing to unpack .../080-libjs-json_0~20221030+~1.0.8-1_all.deb ... 191s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 191s Selecting previously unselected package libjs-lunr. 191s Preparing to unpack .../081-libjs-lunr_2.3.9~dfsg-2_all.deb ... 191s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 191s Selecting previously unselected package libjs-prettify. 191s Preparing to unpack .../082-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 191s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 191s Selecting previously unselected package libkpathsea6:s390x. 191s Preparing to unpack .../083-libkpathsea6_2024.20240313.70630+ds-6_s390x.deb ... 191s Unpacking libkpathsea6:s390x (2024.20240313.70630+ds-6) ... 191s Selecting previously unselected package liblapack3:s390x. 191s Preparing to unpack .../084-liblapack3_3.12.1-2_s390x.deb ... 191s Unpacking liblapack3:s390x (3.12.1-2) ... 191s Selecting previously unselected package liblapack-dev:s390x. 191s Preparing to unpack .../085-liblapack-dev_3.12.1-2_s390x.deb ... 191s Unpacking liblapack-dev:s390x (3.12.1-2) ... 191s Selecting previously unselected package liblua5.4-0:s390x. 191s Preparing to unpack .../086-liblua5.4-0_5.4.7-1_s390x.deb ... 191s Unpacking liblua5.4-0:s390x (5.4.7-1) ... 191s Selecting previously unselected package libmpfi0:s390x. 191s Preparing to unpack .../087-libmpfi0_1.5.4+ds-4_s390x.deb ... 191s Unpacking libmpfi0:s390x (1.5.4+ds-4) ... 191s Selecting previously unselected package libncurses-dev:s390x. 191s Preparing to unpack .../088-libncurses-dev_6.5+20250216-2_s390x.deb ... 191s Unpacking libncurses-dev:s390x (6.5+20250216-2) ... 191s Selecting previously unselected package libthai-data. 191s Preparing to unpack .../089-libthai-data_0.1.29-2build1_all.deb ... 191s Unpacking libthai-data (0.1.29-2build1) ... 191s Selecting previously unselected package libthai0:s390x. 191s Preparing to unpack .../090-libthai0_0.1.29-2build1_s390x.deb ... 191s Unpacking libthai0:s390x (0.1.29-2build1) ... 191s Selecting previously unselected package libpango-1.0-0:s390x. 191s Preparing to unpack .../091-libpango-1.0-0_1.56.3-1_s390x.deb ... 191s Unpacking libpango-1.0-0:s390x (1.56.3-1) ... 191s Selecting previously unselected package libpangoft2-1.0-0:s390x. 191s Preparing to unpack .../092-libpangoft2-1.0-0_1.56.3-1_s390x.deb ... 191s Unpacking libpangoft2-1.0-0:s390x (1.56.3-1) ... 191s Selecting previously unselected package libpangocairo-1.0-0:s390x. 191s Preparing to unpack .../093-libpangocairo-1.0-0_1.56.3-1_s390x.deb ... 191s Unpacking libpangocairo-1.0-0:s390x (1.56.3-1) ... 191s Selecting previously unselected package libpaper2:s390x. 191s Preparing to unpack .../094-libpaper2_2.2.5-0.3_s390x.deb ... 191s Unpacking libpaper2:s390x (2.2.5-0.3) ... 191s Selecting previously unselected package libpaper-utils. 191s Preparing to unpack .../095-libpaper-utils_2.2.5-0.3_s390x.deb ... 191s Unpacking libpaper-utils (2.2.5-0.3) ... 191s Selecting previously unselected package libpcre2-16-0:s390x. 191s Preparing to unpack .../096-libpcre2-16-0_10.45-1_s390x.deb ... 191s Unpacking libpcre2-16-0:s390x (10.45-1) ... 191s Selecting previously unselected package libpcre2-32-0:s390x. 191s Preparing to unpack .../097-libpcre2-32-0_10.45-1_s390x.deb ... 191s Unpacking libpcre2-32-0:s390x (10.45-1) ... 191s Selecting previously unselected package libpcre2-posix3:s390x. 191s Preparing to unpack .../098-libpcre2-posix3_10.45-1_s390x.deb ... 191s Unpacking libpcre2-posix3:s390x (10.45-1) ... 191s Selecting previously unselected package libpcre2-dev:s390x. 191s Preparing to unpack .../099-libpcre2-dev_10.45-1_s390x.deb ... 191s Unpacking libpcre2-dev:s390x (10.45-1) ... 191s Selecting previously unselected package libpkgconf3:s390x. 191s Preparing to unpack .../100-libpkgconf3_1.8.1-4_s390x.deb ... 191s Unpacking libpkgconf3:s390x (1.8.1-4) ... 191s Selecting previously unselected package zlib1g-dev:s390x. 191s Preparing to unpack .../101-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_s390x.deb ... 191s Unpacking zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 191s Selecting previously unselected package libpng-dev:s390x. 191s Preparing to unpack .../102-libpng-dev_1.6.47-1.1_s390x.deb ... 191s Unpacking libpng-dev:s390x (1.6.47-1.1) ... 191s Selecting previously unselected package libpotrace0:s390x. 191s Preparing to unpack .../103-libpotrace0_1.16-2build1_s390x.deb ... 191s Unpacking libpotrace0:s390x (1.16-2build1) ... 191s Selecting previously unselected package libptexenc1:s390x. 191s Preparing to unpack .../104-libptexenc1_2024.20240313.70630+ds-6_s390x.deb ... 191s Unpacking libptexenc1:s390x (2024.20240313.70630+ds-6) ... 191s Selecting previously unselected package libreadline-dev:s390x. 191s Preparing to unpack .../105-libreadline-dev_8.2-6_s390x.deb ... 191s Unpacking libreadline-dev:s390x (8.2-6) ... 191s Selecting previously unselected package libsharpyuv0:s390x. 191s Preparing to unpack .../106-libsharpyuv0_1.5.0-0.1_s390x.deb ... 191s Unpacking libsharpyuv0:s390x (1.5.0-0.1) ... 191s Selecting previously unselected package libsm6:s390x. 191s Preparing to unpack .../107-libsm6_2%3a1.2.6-1_s390x.deb ... 191s Unpacking libsm6:s390x (2:1.2.6-1) ... 191s Selecting previously unselected package libsynctex2:s390x. 191s Preparing to unpack .../108-libsynctex2_2024.20240313.70630+ds-6_s390x.deb ... 191s Unpacking libsynctex2:s390x (2024.20240313.70630+ds-6) ... 191s Selecting previously unselected package libtcl8.6:s390x. 191s Preparing to unpack .../109-libtcl8.6_8.6.16+dfsg-1_s390x.deb ... 191s Unpacking libtcl8.6:s390x (8.6.16+dfsg-1) ... 191s Selecting previously unselected package libteckit0:s390x. 191s Preparing to unpack .../110-libteckit0_2.5.12+ds1-1_s390x.deb ... 191s Unpacking libteckit0:s390x (2.5.12+ds1-1) ... 191s Selecting previously unselected package libtexlua53-5:s390x. 191s Preparing to unpack .../111-libtexlua53-5_2024.20240313.70630+ds-6_s390x.deb ... 191s Unpacking libtexlua53-5:s390x (2024.20240313.70630+ds-6) ... 191s Selecting previously unselected package libjbig0:s390x. 191s Preparing to unpack .../112-libjbig0_2.1-6.1ubuntu2_s390x.deb ... 191s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ... 191s Selecting previously unselected package libwebp7:s390x. 191s Preparing to unpack .../113-libwebp7_1.5.0-0.1_s390x.deb ... 191s Unpacking libwebp7:s390x (1.5.0-0.1) ... 191s Selecting previously unselected package libtiff6:s390x. 191s Preparing to unpack .../114-libtiff6_4.7.0-3ubuntu1_s390x.deb ... 191s Unpacking libtiff6:s390x (4.7.0-3ubuntu1) ... 191s Selecting previously unselected package libxft2:s390x. 191s Preparing to unpack .../115-libxft2_2.3.6-1build1_s390x.deb ... 191s Unpacking libxft2:s390x (2.3.6-1build1) ... 191s Selecting previously unselected package libxss1:s390x. 191s Preparing to unpack .../116-libxss1_1%3a1.2.3-1build3_s390x.deb ... 191s Unpacking libxss1:s390x (1:1.2.3-1build3) ... 191s Selecting previously unselected package libtk8.6:s390x. 191s Preparing to unpack .../117-libtk8.6_8.6.16-1_s390x.deb ... 191s Unpacking libtk8.6:s390x (8.6.16-1) ... 191s Selecting previously unselected package libxt6t64:s390x. 191s Preparing to unpack .../118-libxt6t64_1%3a1.2.1-1.2build1_s390x.deb ... 191s Unpacking libxt6t64:s390x (1:1.2.1-1.2build1) ... 191s Selecting previously unselected package libxmu6:s390x. 191s Preparing to unpack .../119-libxmu6_2%3a1.1.3-3build2_s390x.deb ... 191s Unpacking libxmu6:s390x (2:1.1.3-3build2) ... 191s Selecting previously unselected package libxpm4:s390x. 191s Preparing to unpack .../120-libxpm4_1%3a3.5.17-1build2_s390x.deb ... 191s Unpacking libxpm4:s390x (1:3.5.17-1build2) ... 191s Selecting previously unselected package libxaw7:s390x. 191s Preparing to unpack .../121-libxaw7_2%3a1.0.16-1_s390x.deb ... 191s Unpacking libxaw7:s390x (2:1.0.16-1) ... 191s Selecting previously unselected package libxi6:s390x. 191s Preparing to unpack .../122-libxi6_2%3a1.8.2-1_s390x.deb ... 191s Unpacking libxi6:s390x (2:1.8.2-1) ... 191s Selecting previously unselected package libzstd-dev:s390x. 191s Preparing to unpack .../123-libzstd-dev_1.5.7+dfsg-1_s390x.deb ... 191s Unpacking libzstd-dev:s390x (1.5.7+dfsg-1) ... 191s Selecting previously unselected package libzzip-0-13t64:s390x. 191s Preparing to unpack .../124-libzzip-0-13t64_0.13.78+dfsg.1-0.1_s390x.deb ... 191s Unpacking libzzip-0-13t64:s390x (0.13.78+dfsg.1-0.1) ... 191s Selecting previously unselected package zip. 191s Preparing to unpack .../125-zip_3.0-14ubuntu2_s390x.deb ... 191s Unpacking zip (3.0-14ubuntu2) ... 191s Selecting previously unselected package unzip. 191s Preparing to unpack .../126-unzip_6.0-28ubuntu6_s390x.deb ... 191s Unpacking unzip (6.0-28ubuntu6) ... 191s Selecting previously unselected package xdg-utils. 192s Preparing to unpack .../127-xdg-utils_1.2.1-2ubuntu1_all.deb ... 192s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 192s Selecting previously unselected package r-base-core. 192s Preparing to unpack .../128-r-base-core_4.5.0-3_s390x.deb ... 192s Unpacking r-base-core (4.5.0-3) ... 192s Selecting previously unselected package r-cran-littler. 192s Preparing to unpack .../129-r-cran-littler_0.3.21-1_s390x.deb ... 192s Unpacking r-cran-littler (0.3.21-1) ... 192s Selecting previously unselected package littler. 192s Preparing to unpack .../130-littler_0.3.21-1_all.deb ... 192s Unpacking littler (0.3.21-1) ... 192s Selecting previously unselected package node-bootstrap-sass. 192s Preparing to unpack .../131-node-bootstrap-sass_3.4.3-2_all.deb ... 192s Unpacking node-bootstrap-sass (3.4.3-2) ... 192s Selecting previously unselected package node-html5shiv. 192s Preparing to unpack .../132-node-html5shiv_3.7.3+dfsg-5_all.deb ... 192s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 192s Selecting previously unselected package node-normalize.css. 192s Preparing to unpack .../133-node-normalize.css_8.0.1-5_all.deb ... 192s Unpacking node-normalize.css (8.0.1-5) ... 192s Selecting previously unselected package pandoc-data. 192s Preparing to unpack .../134-pandoc-data_3.1.11.1-3build1_all.deb ... 192s Unpacking pandoc-data (3.1.11.1-3build1) ... 192s Selecting previously unselected package pandoc. 192s Preparing to unpack .../135-pandoc_3.1.11.1+ds-2_s390x.deb ... 192s Unpacking pandoc (3.1.11.1+ds-2) ... 193s Selecting previously unselected package liblzma-dev:s390x. 194s Preparing to unpack .../136-liblzma-dev_5.6.4-1ubuntu1_s390x.deb ... 194s Unpacking liblzma-dev:s390x (5.6.4-1ubuntu1) ... 194s Selecting previously unselected package pkgconf-bin. 194s Preparing to unpack .../137-pkgconf-bin_1.8.1-4_s390x.deb ... 194s Unpacking pkgconf-bin (1.8.1-4) ... 194s Selecting previously unselected package pkgconf:s390x. 194s Preparing to unpack .../138-pkgconf_1.8.1-4_s390x.deb ... 194s Unpacking pkgconf:s390x (1.8.1-4) ... 194s Selecting previously unselected package libtirpc-dev:s390x. 194s Preparing to unpack .../139-libtirpc-dev_1.3.6+ds-1_s390x.deb ... 194s Unpacking libtirpc-dev:s390x (1.3.6+ds-1) ... 194s Selecting previously unselected package r-base-dev. 194s Preparing to unpack .../140-r-base-dev_4.5.0-3_all.deb ... 194s Unpacking r-base-dev (4.5.0-3) ... 194s Selecting previously unselected package pkg-r-autopkgtest. 194s Preparing to unpack .../141-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 194s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 194s Selecting previously unselected package r-bioc-biocgenerics. 194s Preparing to unpack .../142-r-bioc-biocgenerics_0.52.0-2_all.deb ... 194s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 194s Selecting previously unselected package r-bioc-affxparser. 194s Preparing to unpack .../143-r-bioc-affxparser_1.78.0-3_s390x.deb ... 194s Unpacking r-bioc-affxparser (1.78.0-3) ... 194s Selecting previously unselected package r-bioc-zlibbioc. 194s Preparing to unpack .../144-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 194s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 194s Selecting previously unselected package r-bioc-affyio. 194s Preparing to unpack .../145-r-bioc-affyio_1.76.0-2_s390x.deb ... 194s Unpacking r-bioc-affyio (1.76.0-2) ... 194s Selecting previously unselected package r-bioc-biobase. 194s Preparing to unpack .../146-r-bioc-biobase_2.66.0-2_s390x.deb ... 194s Unpacking r-bioc-biobase (2.66.0-2) ... 194s Selecting previously unselected package r-bioc-s4vectors. 194s Preparing to unpack .../147-r-bioc-s4vectors_0.44.0+dfsg-2_s390x.deb ... 194s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 194s Selecting previously unselected package r-bioc-iranges. 194s Preparing to unpack .../148-r-bioc-iranges_2.40.1-3_s390x.deb ... 194s Unpacking r-bioc-iranges (2.40.1-3) ... 194s Selecting previously unselected package r-cran-dbi. 194s Preparing to unpack .../149-r-cran-dbi_1.2.3-1_all.deb ... 194s Unpacking r-cran-dbi (1.2.3-1) ... 194s Selecting previously unselected package r-cran-bit. 194s Preparing to unpack .../150-r-cran-bit_4.6.0+dfsg-1_s390x.deb ... 194s Unpacking r-cran-bit (4.6.0+dfsg-1) ... 194s Selecting previously unselected package r-cran-bit64. 194s Preparing to unpack .../151-r-cran-bit64_4.6.0-1-1ubuntu2_s390x.deb ... 194s Unpacking r-cran-bit64 (4.6.0-1-1ubuntu2) ... 194s Selecting previously unselected package r-cran-rlang. 194s Preparing to unpack .../152-r-cran-rlang_1.1.5-3_s390x.deb ... 194s Unpacking r-cran-rlang (1.1.5-3) ... 194s Selecting previously unselected package r-cran-cli. 194s Preparing to unpack .../153-r-cran-cli_3.6.4-1_s390x.deb ... 194s Unpacking r-cran-cli (3.6.4-1) ... 194s Selecting previously unselected package r-cran-glue. 194s Preparing to unpack .../154-r-cran-glue_1.8.0-1_s390x.deb ... 194s Unpacking r-cran-glue (1.8.0-1) ... 194s Selecting previously unselected package r-cran-lifecycle. 194s Preparing to unpack .../155-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 194s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 194s Selecting previously unselected package r-cran-vctrs. 194s Preparing to unpack .../156-r-cran-vctrs_0.6.5-1_s390x.deb ... 194s Unpacking r-cran-vctrs (0.6.5-1) ... 194s Selecting previously unselected package r-cran-blob. 194s Preparing to unpack .../157-r-cran-blob_1.2.4-1_all.deb ... 194s Unpacking r-cran-blob (1.2.4-1) ... 194s Selecting previously unselected package r-cran-fastmap. 194s Preparing to unpack .../158-r-cran-fastmap_1.2.0-1_s390x.deb ... 194s Unpacking r-cran-fastmap (1.2.0-1) ... 194s Selecting previously unselected package r-cran-cachem. 194s Preparing to unpack .../159-r-cran-cachem_1.1.0-1_s390x.deb ... 194s Unpacking r-cran-cachem (1.1.0-1) ... 194s Selecting previously unselected package r-cran-memoise. 194s Preparing to unpack .../160-r-cran-memoise_2.0.1-1_all.deb ... 194s Unpacking r-cran-memoise (2.0.1-1) ... 194s Selecting previously unselected package r-cran-pkgconfig. 194s Preparing to unpack .../161-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 194s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 194s Selecting previously unselected package r-cran-plogr. 194s Preparing to unpack .../162-r-cran-plogr_0.2.0-3build1_all.deb ... 194s Unpacking r-cran-plogr (0.2.0-3build1) ... 194s Selecting previously unselected package r-cran-cpp11. 194s Preparing to unpack .../163-r-cran-cpp11_0.5.2-1_all.deb ... 194s Unpacking r-cran-cpp11 (0.5.2-1) ... 194s Selecting previously unselected package r-cran-rsqlite. 194s Preparing to unpack .../164-r-cran-rsqlite_2.3.9-1_s390x.deb ... 194s Unpacking r-cran-rsqlite (2.3.9-1) ... 194s Selecting previously unselected package r-cran-curl. 194s Preparing to unpack .../165-r-cran-curl_6.2.1+dfsg-1ubuntu1_s390x.deb ... 194s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 194s Selecting previously unselected package r-cran-jsonlite. 194s Preparing to unpack .../166-r-cran-jsonlite_1.9.1+dfsg-1_s390x.deb ... 194s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 194s Selecting previously unselected package r-cran-mime. 194s Preparing to unpack .../167-r-cran-mime_0.12-2_s390x.deb ... 194s Unpacking r-cran-mime (0.12-2) ... 194s Selecting previously unselected package r-cran-sys. 194s Preparing to unpack .../168-r-cran-sys_3.4.3-1_s390x.deb ... 194s Unpacking r-cran-sys (3.4.3-1) ... 194s Selecting previously unselected package r-cran-askpass. 194s Preparing to unpack .../169-r-cran-askpass_1.2.1-1_s390x.deb ... 194s Unpacking r-cran-askpass (1.2.1-1) ... 194s Selecting previously unselected package r-cran-openssl. 194s Preparing to unpack .../170-r-cran-openssl_2.3.2+dfsg-1_s390x.deb ... 194s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 194s Selecting previously unselected package r-cran-r6. 194s Preparing to unpack .../171-r-cran-r6_2.6.1-1_all.deb ... 194s Unpacking r-cran-r6 (2.6.1-1) ... 194s Selecting previously unselected package r-cran-httr. 194s Preparing to unpack .../172-r-cran-httr_1.4.7+dfsg-1_all.deb ... 194s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 194s Selecting previously unselected package r-cran-png. 194s Preparing to unpack .../173-r-cran-png_0.1-8-1build2_s390x.deb ... 194s Unpacking r-cran-png (0.1-8-1build2) ... 194s Selecting previously unselected package r-bioc-xvector. 194s Preparing to unpack .../174-r-bioc-xvector_0.46.0-2_s390x.deb ... 194s Unpacking r-bioc-xvector (0.46.0-2) ... 194s Selecting previously unselected package r-bioc-ucsc.utils. 194s Preparing to unpack .../175-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 194s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 194s Selecting previously unselected package r-bioc-genomeinfodbdata. 194s Preparing to unpack .../176-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 194s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 194s Selecting previously unselected package r-bioc-genomeinfodb. 194s Preparing to unpack .../177-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 194s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 194s Selecting previously unselected package r-cran-crayon. 194s Preparing to unpack .../178-r-cran-crayon_1.5.3-1_all.deb ... 194s Unpacking r-cran-crayon (1.5.3-1) ... 194s Selecting previously unselected package r-bioc-biostrings. 194s Preparing to unpack .../179-r-bioc-biostrings_2.74.1+dfsg-2_s390x.deb ... 194s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 194s Selecting previously unselected package r-bioc-keggrest. 194s Preparing to unpack .../180-r-bioc-keggrest_1.46.0+dfsg-3_all.deb ... 194s Unpacking r-bioc-keggrest (1.46.0+dfsg-3) ... 194s Selecting previously unselected package r-bioc-annotationdbi. 194s Preparing to unpack .../181-r-bioc-annotationdbi_1.68.0-2_all.deb ... 194s Unpacking r-bioc-annotationdbi (1.68.0-2) ... 194s Selecting previously unselected package r-cran-xml. 194s Preparing to unpack .../182-r-cran-xml_3.99-0.18-1_s390x.deb ... 194s Unpacking r-cran-xml (3.99-0.18-1) ... 194s Selecting previously unselected package r-cran-xtable. 194s Preparing to unpack .../183-r-cran-xtable_1%3a1.8-4-2_all.deb ... 194s Unpacking r-cran-xtable (1:1.8-4-2) ... 194s Selecting previously unselected package r-bioc-annotate. 194s Preparing to unpack .../184-r-bioc-annotate_1.84.0+dfsg-2_all.deb ... 194s Unpacking r-bioc-annotate (1.84.0+dfsg-2) ... 194s Selecting previously unselected package r-cran-generics. 194s Preparing to unpack .../185-r-cran-generics_0.1.3-1_all.deb ... 194s Unpacking r-cran-generics (0.1.3-1) ... 194s Selecting previously unselected package r-cran-magrittr. 194s Preparing to unpack .../186-r-cran-magrittr_2.0.3-1_s390x.deb ... 194s Unpacking r-cran-magrittr (2.0.3-1) ... 194s Selecting previously unselected package r-cran-utf8. 194s Preparing to unpack .../187-r-cran-utf8_1.2.4-1_s390x.deb ... 194s Unpacking r-cran-utf8 (1.2.4-1) ... 194s Selecting previously unselected package r-cran-pillar. 194s Preparing to unpack .../188-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 194s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 194s Selecting previously unselected package r-cran-fansi. 194s Preparing to unpack .../189-r-cran-fansi_1.0.6-1ubuntu1_s390x.deb ... 194s Unpacking r-cran-fansi (1.0.6-1ubuntu1) ... 194s Selecting previously unselected package r-cran-tibble. 194s Preparing to unpack .../190-r-cran-tibble_3.2.1+dfsg-3_s390x.deb ... 194s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 194s Selecting previously unselected package r-cran-withr. 194s Preparing to unpack .../191-r-cran-withr_3.0.2+dfsg-1_all.deb ... 194s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 194s Selecting previously unselected package r-cran-tidyselect. 194s Preparing to unpack .../192-r-cran-tidyselect_1.2.1+dfsg-1_s390x.deb ... 194s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 194s Selecting previously unselected package r-cran-dplyr. 194s Preparing to unpack .../193-r-cran-dplyr_1.1.4-4_s390x.deb ... 194s Unpacking r-cran-dplyr (1.1.4-4) ... 194s Selecting previously unselected package r-cran-purrr. 194s Preparing to unpack .../194-r-cran-purrr_1.0.4-1_s390x.deb ... 194s Unpacking r-cran-purrr (1.0.4-1) ... 194s Selecting previously unselected package r-cran-stringi. 194s Preparing to unpack .../195-r-cran-stringi_1.8.4-1build1_s390x.deb ... 194s Unpacking r-cran-stringi (1.8.4-1build1) ... 194s Selecting previously unselected package r-cran-stringr. 194s Preparing to unpack .../196-r-cran-stringr_1.5.1-1_all.deb ... 194s Unpacking r-cran-stringr (1.5.1-1) ... 194s Selecting previously unselected package r-cran-tidyr. 194s Preparing to unpack .../197-r-cran-tidyr_1.3.1-1_s390x.deb ... 194s Unpacking r-cran-tidyr (1.3.1-1) ... 195s Selecting previously unselected package r-cran-dbplyr. 195s Preparing to unpack .../198-r-cran-dbplyr_2.5.0+dfsg-1_all.deb ... 195s Unpacking r-cran-dbplyr (2.5.0+dfsg-1) ... 195s Selecting previously unselected package r-cran-filelock. 195s Preparing to unpack .../199-r-cran-filelock_1.0.3-1_s390x.deb ... 195s Unpacking r-cran-filelock (1.0.3-1) ... 195s Selecting previously unselected package r-bioc-biocfilecache. 195s Preparing to unpack .../200-r-bioc-biocfilecache_2.14.0+dfsg-2_all.deb ... 195s Unpacking r-bioc-biocfilecache (2.14.0+dfsg-2) ... 195s Selecting previously unselected package r-cran-base64enc. 195s Preparing to unpack .../201-r-cran-base64enc_0.1-3-3_s390x.deb ... 195s Unpacking r-cran-base64enc (0.1-3-3) ... 195s Selecting previously unselected package r-cran-digest. 195s Preparing to unpack .../202-r-cran-digest_0.6.37-1_s390x.deb ... 195s Unpacking r-cran-digest (0.6.37-1) ... 195s Selecting previously unselected package r-cran-htmltools. 195s Preparing to unpack .../203-r-cran-htmltools_0.5.8.1-1_s390x.deb ... 195s Unpacking r-cran-htmltools (0.5.8.1-1) ... 195s Selecting previously unselected package r-cran-evaluate. 195s Preparing to unpack .../204-r-cran-evaluate_1.0.3-1_all.deb ... 195s Unpacking r-cran-evaluate (1.0.3-1) ... 195s Selecting previously unselected package r-cran-xfun. 195s Preparing to unpack .../205-r-cran-xfun_0.51+dfsg-1_s390x.deb ... 195s Unpacking r-cran-xfun (0.51+dfsg-1) ... 195s Selecting previously unselected package r-cran-highr. 195s Preparing to unpack .../206-r-cran-highr_0.11+dfsg-1_all.deb ... 195s Unpacking r-cran-highr (0.11+dfsg-1) ... 195s Selecting previously unselected package r-cran-yaml. 195s Preparing to unpack .../207-r-cran-yaml_2.3.10-1_s390x.deb ... 195s Unpacking r-cran-yaml (2.3.10-1) ... 195s Selecting previously unselected package libjs-mathjax. 195s Preparing to unpack .../208-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 195s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 195s Selecting previously unselected package r-cran-knitr. 195s Preparing to unpack .../209-r-cran-knitr_1.50+dfsg-1_all.deb ... 195s Unpacking r-cran-knitr (1.50+dfsg-1) ... 195s Selecting previously unselected package r-cran-jquerylib. 195s Preparing to unpack .../210-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 195s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 195s Selecting previously unselected package r-cran-fs. 195s Preparing to unpack .../211-r-cran-fs_1.6.5+dfsg-1_s390x.deb ... 195s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 195s Selecting previously unselected package r-cran-rappdirs. 195s Preparing to unpack .../212-r-cran-rappdirs_0.3.3-1_s390x.deb ... 195s Unpacking r-cran-rappdirs (0.3.3-1) ... 195s Selecting previously unselected package r-cran-sass. 195s Preparing to unpack .../213-r-cran-sass_0.4.9+dfsg-1_s390x.deb ... 195s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 195s Selecting previously unselected package r-cran-bslib. 195s Preparing to unpack .../214-r-cran-bslib_0.9.0+dfsg-3_all.deb ... 195s Unpacking r-cran-bslib (0.9.0+dfsg-3) ... 195s Selecting previously unselected package r-cran-fontawesome. 195s Preparing to unpack .../215-r-cran-fontawesome_0.5.3-1_all.deb ... 195s Unpacking r-cran-fontawesome (0.5.3-1) ... 195s Selecting previously unselected package r-cran-tinytex. 195s Preparing to unpack .../216-r-cran-tinytex_0.56-1_all.deb ... 195s Unpacking r-cran-tinytex (0.56-1) ... 195s Selecting previously unselected package libjs-modernizr. 195s Preparing to unpack .../217-libjs-modernizr_3.13.0-0.1_all.deb ... 195s Unpacking libjs-modernizr (3.13.0-0.1) ... 195s Selecting previously unselected package r-cran-pkgkitten. 195s Preparing to unpack .../218-r-cran-pkgkitten_0.2.4-1_all.deb ... 195s Unpacking r-cran-pkgkitten (0.2.4-1) ... 195s Selecting previously unselected package r-cran-rcpp. 195s Preparing to unpack .../219-r-cran-rcpp_1.0.14-1_s390x.deb ... 195s Unpacking r-cran-rcpp (1.0.14-1) ... 195s Selecting previously unselected package r-cran-later. 195s Preparing to unpack .../220-r-cran-later_1.4.1+dfsg-1_s390x.deb ... 195s Unpacking r-cran-later (1.4.1+dfsg-1) ... 195s Selecting previously unselected package r-cran-promises. 195s Preparing to unpack .../221-r-cran-promises_1.3.2+dfsg-1_s390x.deb ... 195s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 195s Selecting previously unselected package r-cran-httpuv. 195s Preparing to unpack .../222-r-cran-httpuv_1.6.15+dfsg-1_s390x.deb ... 195s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 195s Selecting previously unselected package r-cran-sourcetools. 195s Preparing to unpack .../223-r-cran-sourcetools_0.1.7-1-1_s390x.deb ... 195s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 195s Selecting previously unselected package r-cran-commonmark. 196s Preparing to unpack .../224-r-cran-commonmark_1.9.5-1_s390x.deb ... 196s Unpacking r-cran-commonmark (1.9.5-1) ... 196s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 196s Preparing to unpack .../225-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 196s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 196s Selecting previously unselected package r-cran-shiny. 196s Preparing to unpack .../226-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 196s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 196s Selecting previously unselected package r-cran-rmarkdown. 196s Preparing to unpack .../227-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 196s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 196s Selecting previously unselected package r-cran-bookdown. 196s Preparing to unpack .../228-r-cran-bookdown_0.42+dfsg-1_all.deb ... 196s Unpacking r-cran-bookdown (0.42+dfsg-1) ... 196s Selecting previously unselected package r-cran-biocmanager. 196s Preparing to unpack .../229-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 196s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 196s Selecting previously unselected package tex-common. 196s Preparing to unpack .../230-tex-common_6.19_all.deb ... 196s Unpacking tex-common (6.19) ... 196s Selecting previously unselected package t1utils. 196s Preparing to unpack .../231-t1utils_1.41-4build3_s390x.deb ... 196s Unpacking t1utils (1.41-4build3) ... 196s Selecting previously unselected package texlive-binaries. 196s Preparing to unpack .../232-texlive-binaries_2024.20240313.70630+ds-6_s390x.deb ... 196s Unpacking texlive-binaries (2024.20240313.70630+ds-6) ... 196s Selecting previously unselected package texlive-base. 196s Preparing to unpack .../233-texlive-base_2024.20250309-1_all.deb ... 196s Unpacking texlive-base (2024.20250309-1) ... 197s Selecting previously unselected package texlive-latex-base. 197s Preparing to unpack .../234-texlive-latex-base_2024.20250309-1_all.deb ... 197s Unpacking texlive-latex-base (2024.20250309-1) ... 197s Selecting previously unselected package texlive-bibtex-extra. 197s Preparing to unpack .../235-texlive-bibtex-extra_2024.20250309-2_all.deb ... 197s Unpacking texlive-bibtex-extra (2024.20250309-2) ... 201s Selecting previously unselected package r-bioc-biocversion. 201s Preparing to unpack .../236-r-bioc-biocversion_3.20.0-2_all.deb ... 201s Unpacking r-bioc-biocversion (3.20.0-2) ... 201s Selecting previously unselected package r-bioc-biocstyle. 201s Preparing to unpack .../237-r-bioc-biocstyle_2.34.0+dfsg-1_all.deb ... 201s Unpacking r-bioc-biocstyle (2.34.0+dfsg-1) ... 201s Selecting previously unselected package r-cran-hms. 201s Preparing to unpack .../238-r-cran-hms_1.1.3-1_all.deb ... 201s Unpacking r-cran-hms (1.1.3-1) ... 201s Selecting previously unselected package r-cran-prettyunits. 201s Preparing to unpack .../239-r-cran-prettyunits_1.2.0-1_all.deb ... 201s Unpacking r-cran-prettyunits (1.2.0-1) ... 201s Selecting previously unselected package r-cran-progress. 201s Preparing to unpack .../240-r-cran-progress_1.2.3-1_all.deb ... 201s Unpacking r-cran-progress (1.2.3-1) ... 201s Selecting previously unselected package r-cran-httr2. 201s Preparing to unpack .../241-r-cran-httr2_1.1.1-1_all.deb ... 201s Unpacking r-cran-httr2 (1.1.1-1) ... 201s Selecting previously unselected package r-cran-xml2. 201s Preparing to unpack .../242-r-cran-xml2_1.3.8-1_s390x.deb ... 201s Unpacking r-cran-xml2 (1.3.8-1) ... 201s Selecting previously unselected package r-bioc-biomart. 201s Preparing to unpack .../243-r-bioc-biomart_2.62.1+dfsg-1_all.deb ... 201s Unpacking r-bioc-biomart (2.62.1+dfsg-1) ... 201s Selecting previously unselected package r-cran-lattice. 201s Preparing to unpack .../244-r-cran-lattice_0.22-7-1_s390x.deb ... 201s Unpacking r-cran-lattice (0.22-7-1) ... 201s Selecting previously unselected package r-cran-matrix. 201s Preparing to unpack .../245-r-cran-matrix_1.7-3-1_s390x.deb ... 201s Unpacking r-cran-matrix (1.7-3-1) ... 201s Selecting previously unselected package r-cran-matrixstats. 201s Preparing to unpack .../246-r-cran-matrixstats_1.5.0-1_s390x.deb ... 201s Unpacking r-cran-matrixstats (1.5.0-1) ... 201s Selecting previously unselected package r-bioc-matrixgenerics. 201s Preparing to unpack .../247-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 201s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 201s Selecting previously unselected package r-cran-abind. 201s Preparing to unpack .../248-r-cran-abind_1.4-8-1_all.deb ... 201s Unpacking r-cran-abind (1.4-8-1) ... 201s Selecting previously unselected package r-bioc-s4arrays. 201s Preparing to unpack .../249-r-bioc-s4arrays_1.6.0+dfsg-2_s390x.deb ... 201s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 201s Selecting previously unselected package r-bioc-sparsearray. 201s Preparing to unpack .../250-r-bioc-sparsearray_1.6.2+dfsg-1_s390x.deb ... 201s Unpacking r-bioc-sparsearray (1.6.2+dfsg-1) ... 201s Selecting previously unselected package r-bioc-delayedarray. 201s Preparing to unpack .../251-r-bioc-delayedarray_0.32.0+dfsg-2_s390x.deb ... 201s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 201s Selecting previously unselected package r-cran-survival. 201s Preparing to unpack .../252-r-cran-survival_3.8-3-1_s390x.deb ... 201s Unpacking r-cran-survival (3.8-3-1) ... 201s Selecting previously unselected package r-bioc-genefilter. 201s Preparing to unpack .../253-r-bioc-genefilter_1.88.0-2_s390x.deb ... 201s Unpacking r-bioc-genefilter (1.88.0-2) ... 201s Selecting previously unselected package r-bioc-genomicranges. 201s Preparing to unpack .../254-r-bioc-genomicranges_1.58.0+dfsg-2_s390x.deb ... 201s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 201s Selecting previously unselected package r-cran-statmod. 201s Preparing to unpack .../255-r-cran-statmod_1.5.0-1_s390x.deb ... 201s Unpacking r-cran-statmod (1.5.0-1) ... 201s Selecting previously unselected package r-bioc-limma. 201s Preparing to unpack .../256-r-bioc-limma_3.62.2+dfsg-1_s390x.deb ... 201s Unpacking r-bioc-limma (3.62.2+dfsg-1) ... 202s Selecting previously unselected package r-bioc-summarizedexperiment. 202s Preparing to unpack .../257-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 202s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 202s Selecting previously unselected package r-cran-codetools. 202s Preparing to unpack .../258-r-cran-codetools_0.2-20-1_all.deb ... 202s Unpacking r-cran-codetools (0.2-20-1) ... 202s Selecting previously unselected package r-cran-iterators. 202s Preparing to unpack .../259-r-cran-iterators_1.0.14-1_all.deb ... 202s Unpacking r-cran-iterators (1.0.14-1) ... 202s Selecting previously unselected package r-cran-foreach. 202s Preparing to unpack .../260-r-cran-foreach_1.5.2-1_all.deb ... 202s Unpacking r-cran-foreach (1.5.2-1) ... 202s Selecting previously unselected package r-cran-ff. 202s Preparing to unpack .../261-r-cran-ff_4.5.2+ds-1_s390x.deb ... 202s Unpacking r-cran-ff (4.5.2+ds-1) ... 202s Selecting previously unselected package r-bioc-oligoclasses. 202s Preparing to unpack .../262-r-bioc-oligoclasses_1.68.0-2_all.deb ... 202s Unpacking r-bioc-oligoclasses (1.68.0-2) ... 202s Selecting previously unselected package r-bioc-preprocesscore. 202s Preparing to unpack .../263-r-bioc-preprocesscore_1.68.0+ds-2_s390x.deb ... 202s Unpacking r-bioc-preprocesscore (1.68.0+ds-2) ... 202s Selecting previously unselected package r-bioc-oligo. 202s Preparing to unpack .../264-r-bioc-oligo_1.70.0+ds-2_s390x.deb ... 202s Unpacking r-bioc-oligo (1.70.0+ds-2) ... 202s Selecting previously unselected package r-cran-bitops. 202s Preparing to unpack .../265-r-cran-bitops_1.0-9-1_s390x.deb ... 202s Unpacking r-cran-bitops (1.0-9-1) ... 202s Selecting previously unselected package r-cran-rcolorbrewer. 202s Preparing to unpack .../266-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 202s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 202s Selecting previously unselected package r-cran-rcurl. 202s Preparing to unpack .../267-r-cran-rcurl_1.98-1.16+dfsg-1_s390x.deb ... 202s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 202s Selecting previously unselected package r-cran-runit. 202s Preparing to unpack .../268-r-cran-runit_0.4.33-1_all.deb ... 202s Unpacking r-cran-runit (0.4.33-1) ... 202s Preparing to unpack .../269-zstd_1.5.7+dfsg-1_s390x.deb ... 202s Unpacking zstd (1.5.7+dfsg-1) over (1.5.6+dfsg-2) ... 202s Setting up libjs-json (0~20221030+~1.0.8-1) ... 202s Setting up javascript-common (12) ... 202s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 202s Setting up libpixman-1-0:s390x (0.44.0-3) ... 202s Setting up libsharpyuv0:s390x (1.5.0-0.1) ... 202s Setting up libncurses-dev:s390x (6.5+20250216-2) ... 202s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 202s Setting up libzstd-dev:s390x (1.5.7+dfsg-1) ... 202s Setting up libxpm4:s390x (1:3.5.17-1build2) ... 202s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 202s Setting up libxi6:s390x (2:1.8.2-1) ... 202s Setting up libxrender1:s390x (1:0.9.12-1) ... 202s Setting up libdatrie1:s390x (0.2.13-3build1) ... 202s Setting up libjs-popper.js (1.16.1+ds-6) ... 202s Setting up gcc-14-base:s390x (14.2.0-22ubuntu1) ... 202s Setting up libxcb-render0:s390x (1.17.0-2) ... 202s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 202s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-4) ... 202s Setting up libtirpc-common (1.3.6+ds-1) ... 202s Setting up libjs-lunr (2.3.9~dfsg-2) ... 202s Setting up unzip (6.0-28ubuntu6) ... 202s Setting up liblatex-tounicode-perl (0.55-1) ... 202s Setting up x11-common (1:7.7+23ubuntu4) ... 202s Setting up node-html5shiv (3.7.3+dfsg-5) ... 202s Setting up libdeflate0:s390x (1.23-2) ... 202s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 202s Setting up libxcb-shm0:s390x (1.17.0-2) ... 202s Setting up libreadline-dev:s390x (8.2-6) ... 202s Setting up libgomp1:s390x (15.1.0-1ubuntu1) ... 202s Setting up libjs-modernizr (3.13.0-0.1) ... 202s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ... 202s Setting up libpcre2-16-0:s390x (10.45-1) ... 202s Setting up libjs-es5-shim (4.6.7-2) ... 202s Setting up tex-common (6.19) ... 202s update-language: texlive-base not installed and configured, doing nothing! 202s Setting up libio-string-perl (1.08-4) ... 202s Setting up zip (3.0-14ubuntu2) ... 202s Setting up libpcre2-32-0:s390x (10.45-1) ... 202s Setting up libblas3:s390x (3.12.1-2) ... 202s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 202s Setting up libpkgconf3:s390x (1.8.1-4) ... 202s Setting up libzzip-0-13t64:s390x (0.13.78+dfsg.1-0.1) ... 202s Setting up libfreetype6:s390x (2.13.3+dfsg-1) ... 202s Setting up libteckit0:s390x (2.5.12+ds1-1) ... 202s Setting up t1utils (1.41-4build3) ... 202s Setting up libtexlua53-5:s390x (2024.20240313.70630+ds-6) ... 202s Setting up libjs-d3 (3.5.17-4) ... 202s Setting up fonts-dejavu-mono (2.37-8) ... 202s Setting up libmpc3:s390x (1.3.1-1build2) ... 202s Setting up libatomic1:s390x (15.1.0-1ubuntu1) ... 202s Setting up libtcl8.6:s390x (8.6.16+dfsg-1) ... 202s Setting up libmpfi0:s390x (1.5.4+ds-4) ... 202s Setting up icu-devtools (76.1-1ubuntu2) ... 202s Setting up fonts-dejavu-core (2.37-8) ... 202s Setting up pkgconf-bin (1.8.1-4) ... 202s Setting up libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ... 202s Setting up libkpathsea6:s390x (2024.20240313.70630+ds-6) ... 202s Setting up libgfortran5:s390x (15.1.0-1ubuntu1) ... 202s Setting up libwebp7:s390x (1.5.0-0.1) ... 202s Setting up liblzma-dev:s390x (5.6.4-1ubuntu1) ... 202s Setting up libubsan1:s390x (15.1.0-1ubuntu1) ... 202s Setting up zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 202s Setting up libpcre2-posix3:s390x (10.45-1) ... 202s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 202s Setting up libasan8:s390x (15.1.0-1ubuntu1) ... 202s Setting up fonts-lmodern (2.005-1) ... 202s Setting up liblua5.4-0:s390x (5.4.7-1) ... 202s Setting up libharfbuzz0b:s390x (10.2.0-1) ... 202s Setting up libthai-data (0.1.29-2build1) ... 202s Setting up node-bootstrap-sass (3.4.3-2) ... 202s Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... 202s Setting up libxss1:s390x (1:1.2.3-1build3) ... 202s Setting up libjs-bootstrap4 (4.6.2+dfsg-1) ... 202s Setting up libpaper2:s390x (2.2.5-0.3) ... 202s Setting up pandoc-data (3.1.11.1-3build1) ... 202s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 202s Setting up libisl23:s390x (0.27-1) ... 202s Setting up libdeflate-dev:s390x (1.23-2) ... 202s Setting up node-normalize.css (8.0.1-5) ... 202s Setting up libicu-dev:s390x (76.1-1ubuntu2) ... 202s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 202s Setting up xdg-utils (1.2.1-2ubuntu1) ... 202s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 202s Setting up zstd (1.5.7+dfsg-1) ... 202s Setting up libcc1-0:s390x (15.1.0-1ubuntu1) ... 202s Setting up libblas-dev:s390x (3.12.1-2) ... 202s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so to provide /usr/lib/s390x-linux-gnu/libblas.so (libblas.so-s390x-linux-gnu) in auto mode 202s Setting up dctrl-tools (2.24-3build3) ... 202s Setting up libjs-bootstrap (3.4.1+dfsg-4) ... 202s Setting up libitm1:s390x (15.1.0-1ubuntu1) ... 202s Setting up libsynctex2:s390x (2024.20240313.70630+ds-6) ... 202s Setting up libbz2-dev:s390x (1.0.8-6) ... 202s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 202s Setting up libpotrace0:s390x (1.16-2build1) ... 202s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 202s Setting up libice6:s390x (2:1.1.1-1) ... 202s Setting up libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ... 202s Setting up liblapack3:s390x (3.12.1-2) ... 202s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 202s Setting up libpcre2-dev:s390x (10.45-1) ... 202s Setting up libtirpc3t64:s390x (1.3.6+ds-1) ... 202s Setting up fontconfig-config (2.15.0-2.2ubuntu1) ... 202s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 202s Setting up libpng-dev:s390x (1.6.47-1.1) ... 202s Setting up libpaper-utils (2.2.5-0.3) ... 202s Setting up libbibtex-parser-perl (1.05+dfsg-1) ... 202s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 202s Setting up pkgconf:s390x (1.8.1-4) ... 202s Setting up libthai0:s390x (0.1.29-2build1) ... 202s Setting up libtirpc-dev:s390x (1.3.6+ds-1) ... 202s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 202s Setting up libptexenc1:s390x (2024.20240313.70630+ds-6) ... 202s Setting up pandoc (3.1.11.1+ds-2) ... 202s Setting up liblapack-dev:s390x (3.12.1-2) ... 202s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode 202s Setting up cpp-14-s390x-linux-gnu (14.2.0-22ubuntu1) ... 202s Setting up cpp-14 (14.2.0-22ubuntu1) ... 202s Setting up libtiff6:s390x (4.7.0-3ubuntu1) ... 202s Setting up libfontconfig1:s390x (2.15.0-2.2ubuntu1) ... 202s Setting up libgcc-14-dev:s390x (14.2.0-22ubuntu1) ... 202s Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ... 202s Setting up libstdc++-14-dev:s390x (14.2.0-22ubuntu1) ... 202s Setting up libsm6:s390x (2:1.2.6-1) ... 202s Setting up libgfortran-14-dev:s390x (14.2.0-22ubuntu1) ... 202s Setting up fontconfig (2.15.0-2.2ubuntu1) ... 206s Regenerating fonts cache... done. 206s Setting up libxft2:s390x (2.3.6-1build1) ... 206s Setting up cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 206s Setting up libtk8.6:s390x (8.6.16-1) ... 206s Setting up libpango-1.0-0:s390x (1.56.3-1) ... 206s Setting up libjpeg-dev:s390x (8c-2ubuntu11) ... 206s Setting up libcairo2:s390x (1.18.4-1) ... 206s Setting up gcc-14-s390x-linux-gnu (14.2.0-22ubuntu1) ... 206s Setting up gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 206s Setting up libxt6t64:s390x (1:1.2.1-1.2build1) ... 206s Setting up g++-14-s390x-linux-gnu (14.2.0-22ubuntu1) ... 206s Setting up cpp (4:14.2.0-1ubuntu1) ... 206s Setting up libpangoft2-1.0-0:s390x (1.56.3-1) ... 206s Setting up libpangocairo-1.0-0:s390x (1.56.3-1) ... 206s Setting up libxmu6:s390x (2:1.1.3-3build2) ... 206s Setting up gfortran-14-s390x-linux-gnu (14.2.0-22ubuntu1) ... 206s Setting up g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 206s Setting up libxaw7:s390x (2:1.0.16-1) ... 206s Setting up gcc-14 (14.2.0-22ubuntu1) ... 206s Setting up r-base-core (4.5.0-3) ... 206s Creating config file /etc/R/Renviron with new version 206s Setting up r-cran-crayon (1.5.3-1) ... 206s Setting up r-cran-sourcetools (0.1.7-1-1) ... 206s Setting up r-cran-lattice (0.22-7-1) ... 206s Setting up r-cran-xml (3.99-0.18-1) ... 206s Setting up texlive-binaries (2024.20240313.70630+ds-6) ... 206s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 206s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 206s Setting up r-cran-statmod (1.5.0-1) ... 206s Setting up r-cran-commonmark (1.9.5-1) ... 206s Setting up g++-14 (14.2.0-22ubuntu1) ... 206s Setting up r-cran-r6 (2.6.1-1) ... 206s Setting up r-cran-pkgkitten (0.2.4-1) ... 206s Setting up gfortran-14 (14.2.0-22ubuntu1) ... 206s Setting up texlive-base (2024.20250309-1) ... 206s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 206s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 206s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 206s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 206s Setting up r-cran-magrittr (2.0.3-1) ... 206s Setting up r-cran-rappdirs (0.3.3-1) ... 206s Setting up r-cran-filelock (1.0.3-1) ... 206s Setting up r-bioc-genomeinfodbdata (1.2.13-2) ... 206s Setting up r-cran-littler (0.3.21-1) ... 206s Setting up r-cran-fs (1.6.5+dfsg-1) ... 206s Setting up r-cran-rcpp (1.0.14-1) ... 206s Setting up r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 206s Setting up r-cran-codetools (0.2-20-1) ... 206s Setting up r-bioc-biocgenerics (0.52.0-2) ... 206s Setting up r-cran-rlang (1.1.5-3) ... 206s Setting up r-cran-matrixstats (1.5.0-1) ... 206s Setting up littler (0.3.21-1) ... 206s Setting up gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 206s Setting up r-bioc-matrixgenerics (1.18.1-1) ... 206s Setting up r-cran-xfun (0.51+dfsg-1) ... 206s Setting up r-cran-sys (3.4.3-1) ... 206s Setting up r-cran-plogr (0.2.0-3build1) ... 206s Setting up r-cran-withr (3.0.2+dfsg-1) ... 206s Setting up r-cran-mime (0.12-2) ... 206s Setting up r-cran-generics (0.1.3-1) ... 206s Setting up r-cran-base64enc (0.1-3-3) ... 206s Setting up r-cran-iterators (1.0.14-1) ... 206s Setting up r-cran-abind (1.4-8-1) ... 206s Setting up r-cran-digest (0.6.37-1) ... 206s Setting up r-cran-yaml (2.3.10-1) ... 206s Setting up r-cran-evaluate (1.0.3-1) ... 206s Setting up r-cran-dbi (1.2.3-1) ... 206s Setting up r-cran-highr (0.11+dfsg-1) ... 206s Setting up r-cran-foreach (1.5.2-1) ... 206s Setting up r-cran-prettyunits (1.2.0-1) ... 206s Setting up r-cran-fansi (1.0.6-1ubuntu1) ... 206s Setting up r-cran-glue (1.8.0-1) ... 206s Setting up r-cran-bit (4.6.0+dfsg-1) ... 206s Setting up r-cran-ff (4.5.2+ds-1) ... 206s Setting up r-cran-xtable (1:1.8-4-2) ... 206s Setting up r-cran-cli (3.6.4-1) ... 206s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 206s Setting up r-cran-bitops (1.0-9-1) ... 206s Setting up r-bioc-biocversion (3.20.0-2) ... 206s Setting up r-cran-bit64 (4.6.0-1-1ubuntu2) ... 206s Setting up r-cran-biocmanager (1.30.25+dfsg-1) ... 206s Setting up gcc (4:14.2.0-1ubuntu1) ... 206s Setting up r-bioc-zlibbioc (1.52.0+dfsg-2) ... 206s Setting up r-cran-askpass (1.2.1-1) ... 206s Setting up r-cran-fastmap (1.2.0-1) ... 206s Setting up r-cran-png (0.1-8-1build2) ... 206s Setting up r-bioc-affxparser (1.78.0-3) ... 206s Setting up r-bioc-biobase (2.66.0-2) ... 206s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ... 206s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 206s Setting up r-cran-utf8 (1.2.4-1) ... 206s Setting up r-cran-stringi (1.8.4-1build1) ... 206s Setting up texlive-latex-base (2024.20250309-1) ... 206s Setting up r-cran-cpp11 (0.5.2-1) ... 206s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 206s Setting up r-bioc-s4vectors (0.44.0+dfsg-2) ... 206s Setting up r-cran-runit (0.4.33-1) ... 206s Setting up r-bioc-limma (3.62.2+dfsg-1) ... 206s Setting up r-cran-later (1.4.1+dfsg-1) ... 206s Setting up r-cran-matrix (1.7-3-1) ... 206s Setting up r-cran-htmltools (0.5.8.1-1) ... 206s Setting up r-cran-tinytex (0.56-1) ... 206s Setting up r-cran-knitr (1.50+dfsg-1) ... 206s Setting up g++ (4:14.2.0-1ubuntu1) ... 206s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 206s Setting up r-cran-cachem (1.1.0-1) ... 206s Setting up r-cran-sass (0.4.9+dfsg-1) ... 206s Setting up build-essential (12.12ubuntu1) ... 206s Setting up r-bioc-preprocesscore (1.68.0+ds-2) ... 206s Setting up r-bioc-iranges (2.40.1-3) ... 206s Setting up r-cran-rcurl (1.98-1.16+dfsg-1) ... 206s Setting up r-cran-vctrs (0.6.5-1) ... 206s Setting up r-cran-pillar (1.10.1+dfsg-1) ... 206s Setting up r-cran-openssl (2.3.2+dfsg-1) ... 206s Setting up r-bioc-affyio (1.76.0-2) ... 206s Setting up r-bioc-s4arrays (1.6.0+dfsg-2) ... 206s Setting up r-cran-stringr (1.5.1-1) ... 206s Setting up r-cran-xml2 (1.3.8-1) ... 206s Setting up r-cran-tibble (3.2.1+dfsg-3) ... 206s Setting up r-cran-fontawesome (0.5.3-1) ... 206s Setting up r-cran-survival (3.8-3-1) ... 206s Setting up gfortran (4:14.2.0-1ubuntu1) ... 206s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 206s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 206s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 206s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 206s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 206s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... 206s Setting up texlive-bibtex-extra (2024.20250309-2) ... 206s Setting up r-cran-httr2 (1.1.1-1) ... 206s Setting up r-cran-httr (1.4.7+dfsg-1) ... 206s Setting up r-cran-hms (1.1.3-1) ... 206s Setting up r-cran-memoise (2.0.1-1) ... 206s Setting up r-cran-promises (1.3.2+dfsg-1) ... 206s Setting up r-cran-purrr (1.0.4-1) ... 206s Setting up r-cran-blob (1.2.4-1) ... 206s Setting up r-bioc-xvector (0.46.0-2) ... 206s Setting up r-cran-dplyr (1.1.4-4) ... 206s Setting up r-cran-rsqlite (2.3.9-1) ... 206s Setting up r-cran-progress (1.2.3-1) ... 206s Setting up r-base-dev (4.5.0-3) ... 206s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 206s Setting up r-bioc-sparsearray (1.6.2+dfsg-1) ... 206s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 206s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 206s Setting up r-cran-bslib (0.9.0+dfsg-3) ... 206s Setting up r-cran-tidyr (1.3.1-1) ... 206s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 206s Setting up r-cran-dbplyr (2.5.0+dfsg-1) ... 206s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 206s Setting up r-bioc-biocfilecache (2.14.0+dfsg-2) ... 206s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 206s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 206s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 206s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 206s Setting up r-cran-bookdown (0.42+dfsg-1) ... 206s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 206s Setting up r-bioc-keggrest (1.46.0+dfsg-3) ... 206s Setting up r-bioc-annotationdbi (1.68.0-2) ... 206s Setting up r-bioc-annotate (1.84.0+dfsg-2) ... 206s Setting up r-bioc-biomart (2.62.1+dfsg-1) ... 206s Setting up r-bioc-genefilter (1.88.0-2) ... 206s Setting up r-bioc-biocstyle (2.34.0+dfsg-1) ... 206s Setting up r-bioc-oligoclasses (1.68.0-2) ... 206s Setting up r-bioc-oligo (1.70.0+ds-2) ... 206s Processing triggers for man-db (2.13.0-1) ... 207s Processing triggers for install-info (7.1.1-1) ... 207s Processing triggers for libc-bin (2.41-6ubuntu1) ... 207s Processing triggers for tex-common (6.19) ... 208s Running updmap-sys. This may take some time... done. 208s Running mktexlsr /var/lib/texmf ... done. 208s Building format(s) --all. 256s This may take some time... done. 257s autopkgtest [15:23:19]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 257s autopkgtest [15:23:19]: test pkg-r-autopkgtest: [----------------------- 258s Test: Try to load the R library oligo 258s 258s R version 4.5.0 (2025-04-11) -- "How About a Twenty-Six" 258s Copyright (C) 2025 The R Foundation for Statistical Computing 258s Platform: s390x-ibm-linux-gnu 258s 258s R is free software and comes with ABSOLUTELY NO WARRANTY. 258s You are welcome to redistribute it under certain conditions. 258s Type 'license()' or 'licence()' for distribution details. 258s 258s R is a collaborative project with many contributors. 258s Type 'contributors()' for more information and 258s 'citation()' on how to cite R or R packages in publications. 258s 258s Type 'demo()' for some demos, 'help()' for on-line help, or 258s 'help.start()' for an HTML browser interface to help. 258s Type 'q()' to quit R. 258s 258s > library('oligo') 258s Loading required package: BiocGenerics 258s 258s Attaching package: ‘BiocGenerics’ 258s 258s The following objects are masked from ‘package:stats’: 258s 258s IQR, mad, sd, var, xtabs 258s 258s The following objects are masked from ‘package:base’: 258s 258s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 258s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 258s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 258s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 258s Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff, 258s table, tapply, union, unique, unsplit, which.max, which.min 258s 258s Loading required package: oligoClasses 266s Welcome to oligoClasses version 1.68.0 266s Loading required package: Biobase 266s Welcome to Bioconductor 266s 266s Vignettes contain introductory material; view with 266s 'browseVignettes()'. To cite Bioconductor, see 266s 'citation("Biobase")', and for packages 'citation("pkgname")'. 266s 266s Loading required package: Biostrings 266s Loading required package: S4Vectors 266s Loading required package: stats4 266s 266s Attaching package: ‘S4Vectors’ 266s 266s The following object is masked from ‘package:utils’: 266s 266s findMatches 266s 266s The following objects are masked from ‘package:base’: 266s 266s expand.grid, I, unname 266s 266s Loading required package: IRanges 266s Loading required package: XVector 266s Loading required package: GenomeInfoDb 266s 266s Attaching package: ‘Biostrings’ 266s 266s The following object is masked from ‘package:base’: 266s 266s strsplit 266s 266s ================================================================================ 266s Welcome to oligo version 1.70.0 266s ================================================================================ 266s > 266s Other tests are currently unsupported! 266s They will be progressively added. 267s autopkgtest [15:23:29]: test pkg-r-autopkgtest: -----------------------] 267s autopkgtest [15:23:29]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 267s pkg-r-autopkgtest PASS 267s autopkgtest [15:23:29]: @@@@@@@@@@@@@@@@@@@@ summary 267s pkg-r-autopkgtest PASS 285s nova [W] Using flock in prodstack6-s390x 285s Creating nova instance adt-questing-s390x-r-bioc-oligo-20250502-151902-juju-7f2275-prod-proposed-migration-environment-15-ed6aa854-aacc-4f99-820b-d8f66890d111 from image adt/ubuntu-questing-s390x-server-20250502.img (UUID 632ecfca-a19d-4f3a-af48-b7883fa0ccf2)... 285s nova [W] Timed out waiting for 27cb3d26-9bb6-48bb-8fe0-bc94d1128d0a to get deleted.