0s autopkgtest [20:59:53]: starting date and time: 2025-05-02 20:59:53+0000
  0s autopkgtest [20:59:53]: git checkout: 9986aa8c Merge branch 'skia/fix_network_interface' into 'ubuntu/production'
  0s autopkgtest [20:59:53]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.v88w8dxx/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base --apt-upgrade r-bioc-keggrest --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-base/4.5.0-3 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-s390x-12.secgroup --name adt-questing-s390x-r-bioc-keggrest-20250502-205953-juju-7f2275-prod-proposed-migration-environment-20-7e900ace-6ec6-4329-b006-b420ce22a626 --image adt/ubuntu-questing-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-s390x -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/
 65s autopkgtest [21:00:58]: testbed dpkg architecture: s390x
 65s autopkgtest [21:00:58]: testbed apt version: 3.0.0
 66s autopkgtest [21:00:59]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 66s autopkgtest [21:00:59]: testbed release detected to be: None
 66s autopkgtest [21:00:59]: updating testbed package index (apt update)
 67s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB]
 67s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease
 67s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease
 67s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease
 67s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [43.1 kB]
 67s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [167 kB]
 67s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [1968 kB]
 68s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main s390x Packages [207 kB]
 68s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x Packages [1307 kB]
 68s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse s390x Packages [8572 B]
 68s Fetched 3811 kB in 1s (3091 kB/s)
 70s Reading package lists...
 70s autopkgtest [21:01:02]: upgrading testbed (apt dist-upgrade and autopurge)
 70s Reading package lists...
 70s Building dependency tree...
 70s Reading state information...
 70s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
 70s Starting 2 pkgProblemResolver with broken count: 0
 70s Done
 70s Entering ResolveByKeep
 70s 
 70s Calculating upgrade...
 70s The following packages will be upgraded:
 70s   fwupd htop libftdi1-2 libfwupd3 libnpth0t64 libsensors-config libsensors5
 70s   liburcu8t64 nano usb.ids
 71s 10 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 71s Need to get 2536 kB of archives.
 71s After this operation, 3749 kB disk space will be freed.
 71s Get:1 http://ftpmaster.internal/ubuntu questing/main s390x libnpth0t64 s390x 1.8-3 [8778 B]
 71s Get:2 http://ftpmaster.internal/ubuntu questing/main s390x libsensors-config all 1:3.6.2-2 [6756 B]
 71s Get:3 http://ftpmaster.internal/ubuntu questing/main s390x libsensors5 s390x 1:3.6.2-2 [29.2 kB]
 71s Get:4 http://ftpmaster.internal/ubuntu questing/main s390x liburcu8t64 s390x 0.15.2-2 [66.3 kB]
 71s Get:5 http://ftpmaster.internal/ubuntu questing/main s390x nano s390x 8.4-1 [299 kB]
 71s Get:6 http://ftpmaster.internal/ubuntu questing/main s390x usb.ids all 2025.04.01-1 [223 kB]
 71s Get:7 http://ftpmaster.internal/ubuntu questing/main s390x fwupd s390x 2.0.8-3 [1548 kB]
 71s Get:8 http://ftpmaster.internal/ubuntu questing/main s390x libfwupd3 s390x 2.0.8-3 [135 kB]
 71s Get:9 http://ftpmaster.internal/ubuntu questing/main s390x htop s390x 3.4.1-4 [189 kB]
 71s Get:10 http://ftpmaster.internal/ubuntu questing/main s390x libftdi1-2 s390x 1.5-10 [31.4 kB]
 71s Fetched 2536 kB in 1s (3552 kB/s)
 72s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81472 files and directories currently installed.)
 72s Preparing to unpack .../libnpth0t64_1.8-3_s390x.deb ...
 72s Unpacking libnpth0t64:s390x (1.8-3) over (1.8-2) ...
 72s Setting up libnpth0t64:s390x (1.8-3) ...
 72s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81472 files and directories currently installed.)
 72s Preparing to unpack .../0-libsensors-config_1%3a3.6.2-2_all.deb ...
 72s Unpacking libsensors-config (1:3.6.2-2) over (1:3.6.0-10) ...
 72s Preparing to unpack .../1-libsensors5_1%3a3.6.2-2_s390x.deb ...
 72s Unpacking libsensors5:s390x (1:3.6.2-2) over (1:3.6.0-10) ...
 72s Preparing to unpack .../2-liburcu8t64_0.15.2-2_s390x.deb ...
 72s Unpacking liburcu8t64:s390x (0.15.2-2) over (0.15.1-1) ...
 72s Preparing to unpack .../3-nano_8.4-1_s390x.deb ...
 72s Unpacking nano (8.4-1) over (8.3-1) ...
 72s Preparing to unpack .../4-usb.ids_2025.04.01-1_all.deb ...
 72s Unpacking usb.ids (2025.04.01-1) over (2025.01.14-1) ...
 72s Preparing to unpack .../5-fwupd_2.0.8-3_s390x.deb ...
 72s Unpacking fwupd (2.0.8-3) over (2.0.7-1) ...
 72s dpkg: warning: unable to delete old directory '/etc/grub.d': Directory not empty
 72s Preparing to unpack .../6-libfwupd3_2.0.8-3_s390x.deb ...
 72s Unpacking libfwupd3:s390x (2.0.8-3) over (2.0.7-1) ...
 72s Preparing to unpack .../7-htop_3.4.1-4_s390x.deb ...
 72s Unpacking htop (3.4.1-4) over (3.4.0-2) ...
 72s Preparing to unpack .../8-libftdi1-2_1.5-10_s390x.deb ...
 72s Unpacking libftdi1-2:s390x (1.5-10) over (1.5-8build1) ...
 72s Setting up liburcu8t64:s390x (0.15.2-2) ...
 72s Setting up htop (3.4.1-4) ...
 72s Setting up libsensors-config (1:3.6.2-2) ...
 72s Installing new version of config file /etc/sensors3.conf ...
 72s Setting up libfwupd3:s390x (2.0.8-3) ...
 72s Setting up libftdi1-2:s390x (1.5-10) ...
 72s Setting up usb.ids (2025.04.01-1) ...
 72s Setting up libsensors5:s390x (1:3.6.2-2) ...
 72s Setting up nano (8.4-1) ...
 72s Installing new version of config file /etc/nanorc ...
 72s Setting up fwupd (2.0.8-3) ...
 73s fwupd-refresh.service is a disabled or a static unit not running, not starting it.
 73s fwupd.service is a disabled or a static unit not running, not starting it.
 73s Processing triggers for man-db (2.13.0-1) ...
 75s Processing triggers for dbus (1.16.2-2ubuntu1) ...
 75s Processing triggers for install-info (7.1.1-1) ...
 75s Processing triggers for libc-bin (2.41-6ubuntu1) ...
 75s Reading package lists...
 75s Building dependency tree...
 75s Reading state information...
 75s Starting pkgProblemResolver with broken count: 0
 75s Starting 2 pkgProblemResolver with broken count: 0
 75s Done
 75s Solving dependencies...
 76s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 76s autopkgtest [21:01:09]: rebooting testbed after setup commands that affected boot
 80s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds...
108s autopkgtest [21:01:41]: testbed running kernel: Linux 6.14.0-15-generic #15-Ubuntu SMP Sun Apr  6 13:39:00 UTC 2025
110s autopkgtest [21:01:43]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-keggrest
112s Get:1 http://ftpmaster.internal/ubuntu questing/universe r-bioc-keggrest 1.46.0+dfsg-2 (dsc) [2147 B]
112s Get:2 http://ftpmaster.internal/ubuntu questing/universe r-bioc-keggrest 1.46.0+dfsg-2 (tar) [16.4 kB]
112s Get:3 http://ftpmaster.internal/ubuntu questing/universe r-bioc-keggrest 1.46.0+dfsg-2 (diff) [5980 B]
112s gpgv: Signature made Sun Jan 12 19:16:45 2025 UTC
112s gpgv:                using RSA key 724D609337113C710550D7473C26763F6C67E6E2
112s gpgv:                issuer "crusoe@debian.org"
112s gpgv: Can't check signature: No public key
112s dpkg-source: warning: cannot verify inline signature for ./r-bioc-keggrest_1.46.0+dfsg-2.dsc: no acceptable signature found
112s autopkgtest [21:01:45]: testing package r-bioc-keggrest version 1.46.0+dfsg-2
113s autopkgtest [21:01:46]: build not needed
114s autopkgtest [21:01:47]: test pkg-r-autopkgtest: preparing testbed
114s Reading package lists...
114s Building dependency tree...
114s Reading state information...
114s Starting pkgProblemResolver with broken count: 13
114s Starting 2 pkgProblemResolver with broken count: 13
115s Investigating (0) r-cran-shiny:s390x < none -> 1.10.0+dfsg-2 @un puN Ib >
115s Broken r-cran-shiny:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 0.4.10)
115s   Considering r-cran-rlang:s390x 8 as a solution to r-cran-shiny:s390x 56
115s   Considering r-cran-rlang:s390x 8 as a solution to r-cran-shiny:s390x 56
115s Investigating (0) r-cran-sass:s390x < none -> 0.4.9+dfsg-1 @un puN Ib >
115s Broken r-cran-sass:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 0.4.10)
115s   Considering r-cran-rlang:s390x 8 as a solution to r-cran-sass:s390x 54
115s   Considering r-cran-rlang:s390x 8 as a solution to r-cran-sass:s390x 54
115s Investigating (0) r-cran-bslib:s390x < none -> 0.9.0+dfsg-1syncable1 @un puN Ib >
115s Broken r-cran-bslib:s390x Depends on r-cran-rlang:s390x < none @un pH >
115s   Considering r-cran-rlang:s390x 8 as a solution to r-cran-bslib:s390x 51
115s   Considering r-cran-rlang:s390x 8 as a solution to r-cran-bslib:s390x 51
115s Investigating (0) r-cran-htmltools:s390x < none -> 0.5.8.1-1 @un puN Ib >
115s Broken r-cran-htmltools:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 1.0.0)
115s   Considering r-cran-rlang:s390x 8 as a solution to r-cran-htmltools:s390x 41
115s   Considering r-cran-rlang:s390x 8 as a solution to r-cran-htmltools:s390x 41
115s Investigating (0) r-cran-fontawesome:s390x < none -> 0.5.3-1 @un puN Ib >
115s Broken r-cran-fontawesome:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 1.0.6)
115s   Considering r-cran-rlang:s390x 8 as a solution to r-cran-fontawesome:s390x 29
115s   Considering r-cran-rlang:s390x 8 as a solution to r-cran-fontawesome:s390x 29
115s Investigating (0) r-cran-later:s390x < none -> 1.4.1+dfsg-1 @un puN Ib >
115s Broken r-cran-later:s390x Depends on r-cran-rlang:s390x < none @un pH >
115s   Considering r-cran-rlang:s390x 8 as a solution to r-cran-later:s390x 18
115s   Considering r-cran-rlang:s390x 8 as a solution to r-cran-later:s390x 18
115s Investigating (0) r-cran-cachem:s390x < none -> 1.1.0-1 @un puN Ib >
115s Broken r-cran-cachem:s390x Depends on r-cran-rlang:s390x < none @un pH >
115s   Considering r-cran-rlang:s390x 8 as a solution to r-cran-cachem:s390x 10
115s   Considering r-cran-rlang:s390x 8 as a solution to r-cran-cachem:s390x 10
115s Investigating (0) r-cran-lifecycle:s390x < none -> 1.0.4+dfsg-1 @un puN Ib >
115s Broken r-cran-lifecycle:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 1.1.0)
115s   Considering r-cran-rlang:s390x 8 as a solution to r-cran-lifecycle:s390x 9
115s   Considering r-cran-rlang:s390x 8 as a solution to r-cran-lifecycle:s390x 9
115s Investigating (0) r-cran-promises:s390x < none -> 1.3.2+dfsg-1 @un puN Ib >
115s Broken r-cran-promises:s390x Depends on r-cran-rlang:s390x < none @un pH >
115s   Considering r-cran-rlang:s390x 8 as a solution to r-cran-promises:s390x 8
115s   Considering r-cran-rlang:s390x 8 as a solution to r-cran-promises:s390x 8
115s Investigating (0) r-cran-memoise:s390x < none -> 2.0.1-1 @un puN Ib >
115s Broken r-cran-memoise:s390x Depends on r-cran-rlang:s390x < none @un pH > (>= 0.4.10)
115s   Considering r-cran-rlang:s390x 8 as a solution to r-cran-memoise:s390x 3
115s   Considering r-cran-rlang:s390x 8 as a solution to r-cran-memoise:s390x 3
115s Investigating (0) r-bioc-xvector:s390x < none -> 0.46.0-2 @un puN Ib >
115s Broken r-bioc-xvector:s390x Depends on r-bioc-iranges:s390x < none @un pH > (>= 2.23.9)
115s   Considering r-bioc-iranges:s390x 0 as a solution to r-bioc-xvector:s390x 0
115s   Considering r-bioc-iranges:s390x 0 as a solution to r-bioc-xvector:s390x 0
115s Investigating (0) r-bioc-genomeinfodb:s390x < none -> 1.42.3+dfsg-1 @un puN Ib >
115s Broken r-bioc-genomeinfodb:s390x Depends on r-bioc-iranges:s390x < none @un pH > (>= 2.13.12)
115s   Considering r-bioc-iranges:s390x 0 as a solution to r-bioc-genomeinfodb:s390x 0
115s   Considering r-bioc-iranges:s390x 0 as a solution to r-bioc-genomeinfodb:s390x 0
115s Investigating (0) r-bioc-biostrings:s390x < none -> 2.74.1+dfsg-2 @un puN Ib >
115s Broken r-bioc-biostrings:s390x Depends on r-bioc-iranges:s390x < none @un pH > (>= 2.31.2)
115s   Considering r-bioc-iranges:s390x 0 as a solution to r-bioc-biostrings:s390x 0
115s   Considering r-bioc-iranges:s390x 0 as a solution to r-bioc-biostrings:s390x 0
115s Done
115s Some packages could not be installed. This may mean that you have
115s requested an impossible situation or if you are using the unstable
115s distribution that some required packages have not yet been created
115s or been moved out of Incoming.
115s The following information may help to resolve the situation:
115s 
115s The following packages have unmet dependencies:
115s  r-bioc-biostrings : Depends: r-bioc-iranges (>= 2.31.2) but it is not installable
115s  r-bioc-genomeinfodb : Depends: r-bioc-iranges (>= 2.13.12) but it is not installable
115s  r-bioc-xvector : Depends: r-bioc-iranges (>= 2.23.9) but it is not installable
115s  r-cran-bslib : Depends: r-cran-rlang but it is not installable
115s  r-cran-cachem : Depends: r-cran-rlang but it is not installable
115s  r-cran-fontawesome : Depends: r-cran-rlang (>= 1.0.6) but it is not installable
115s  r-cran-htmltools : Depends: r-cran-rlang (>= 1.0.0) but it is not installable
115s  r-cran-later : Depends: r-cran-rlang but it is not installable
115s  r-cran-lifecycle : Depends: r-cran-rlang (>= 1.1.0) but it is not installable
115s  r-cran-memoise : Depends: r-cran-rlang (>= 0.4.10) but it is not installable
115s  r-cran-promises : Depends: r-cran-rlang but it is not installable
115s  r-cran-sass : Depends: r-cran-rlang (>= 0.4.10) but it is not installable
115s  r-cran-shiny : Depends: r-cran-rlang (>= 0.4.10) but it is not installable
115s E: Unable to correct problems, you have held broken packages.
115s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from questing-proposed
115s Reading package lists...
115s Building dependency tree...
115s Reading state information...
116s Starting pkgProblemResolver with broken count: 0
116s Starting 2 pkgProblemResolver with broken count: 0
116s Done
116s The following NEW packages will be installed:
116s   build-essential cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu
116s   dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
116s   fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax
116s   g++ g++-14 g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14
116s   gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-14
116s   gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools
116s   javascript-common libasan8 libbibtex-parser-perl libblas-dev libblas3
116s   libbz2-dev libcairo2 libcc1-0 libdatrie1 libdeflate-dev libdeflate0
116s   libfontconfig1 libfreetype6 libgcc-14-dev libgfortran-14-dev libgfortran5
116s   libgomp1 libgraphite2-3 libharfbuzz0b libice6 libicu-dev libio-string-perl
116s   libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev
116s   libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3
116s   libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables
116s   libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr
116s   libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js
116s   libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker
116s   libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblua5.4-0
116s   liblzma-dev libmpc3 libmpfi0 libncurses-dev libpango-1.0-0
116s   libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libpcre2-16-0
116s   libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3
116s   libpng-dev libpotrace0 libptexenc1 libreadline-dev libsharpyuv0 libsm6
116s   libstdc++-14-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data
116s   libthai0 libtiff6 libtirpc-dev libtk8.6 libubsan1 libwebp7 libxaw7
116s   libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 libxrender1
116s   libxss1 libxt6t64 libzstd-dev libzzip-0-13t64 littler node-bootstrap-sass
116s   node-html5shiv node-normalize.css pandoc pandoc-data pkg-r-autopkgtest
116s   pkgconf pkgconf-bin r-base-core r-base-dev r-bioc-biocgenerics
116s   r-bioc-biocstyle r-bioc-biocversion r-bioc-biostrings r-bioc-genomeinfodb
116s   r-bioc-genomeinfodbdata r-bioc-iranges r-bioc-keggrest r-bioc-s4vectors
116s   r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-askpass
116s   r-cran-base64enc r-cran-biocmanager r-cran-bookdown r-cran-bslib
116s   r-cran-cachem r-cran-cli r-cran-commonmark r-cran-crayon r-cran-curl
116s   r-cran-digest r-cran-evaluate r-cran-fastmap r-cran-fontawesome r-cran-fs
116s   r-cran-glue r-cran-highr r-cran-htmltools r-cran-httpuv r-cran-httr
116s   r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-later r-cran-lifecycle
116s   r-cran-littler r-cran-magrittr r-cran-markdown r-cran-memoise r-cran-mime
116s   r-cran-openssl r-cran-pkgkitten r-cran-png r-cran-promises r-cran-r6
116s   r-cran-rappdirs r-cran-rcpp r-cran-rlang r-cran-rmarkdown r-cran-runit
116s   r-cran-sass r-cran-shiny r-cran-sourcetools r-cran-sys r-cran-tinytex
116s   r-cran-withr r-cran-xfun r-cran-xtable r-cran-yaml t1utils tex-common
116s   texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base unzip
116s   x11-common xdg-utils zip zlib1g-dev
116s The following packages will be upgraded:
116s   gcc-14-base gcc-15-base libatomic1 libgcc-s1 libstdc++6 libtirpc-common
116s   libtirpc3t64 libzstd1 zstd
116s 9 upgraded, 208 newly installed, 0 to remove and 95 not upgraded.
116s Need to get 371 MB of archives.
116s After this operation, 1167 MB of additional disk space will be used.
116s Get:1 http://ftpmaster.internal/ubuntu questing-proposed/main s390x gcc-15-base s390x 15.1.0-2ubuntu1 [54.6 kB]
117s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libgcc-s1 s390x 15.1.0-2ubuntu1 [35.7 kB]
117s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libatomic1 s390x 15.1.0-2ubuntu1 [9564 B]
117s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libstdc++6 s390x 15.1.0-2ubuntu1 [906 kB]
117s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libzstd1 s390x 1.5.7+dfsg-1 [345 kB]
117s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main s390x gcc-14-base s390x 14.2.0-22ubuntu1 [55.1 kB]
117s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libtirpc-common all 1.3.6+ds-1 [8198 B]
117s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libtirpc3t64 s390x 1.3.6+ds-1 [84.9 kB]
117s Get:9 http://ftpmaster.internal/ubuntu questing/main s390x libisl23 s390x 0.27-1 [704 kB]
117s Get:10 http://ftpmaster.internal/ubuntu questing/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB]
117s Get:11 http://ftpmaster.internal/ubuntu questing-proposed/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-22ubuntu1 [9570 kB]
117s Get:12 http://ftpmaster.internal/ubuntu questing-proposed/main s390x cpp-14 s390x 14.2.0-22ubuntu1 [1028 B]
117s Get:13 http://ftpmaster.internal/ubuntu questing/main s390x cpp-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [5556 B]
117s Get:14 http://ftpmaster.internal/ubuntu questing/main s390x cpp s390x 4:14.2.0-1ubuntu1 [22.4 kB]
117s Get:15 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libcc1-0 s390x 15.1.0-2ubuntu1 [49.8 kB]
117s Get:16 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libgomp1 s390x 15.1.0-2ubuntu1 [153 kB]
117s Get:17 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libitm1 s390x 15.1.0-2ubuntu1 [31.1 kB]
117s Get:18 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libasan8 s390x 15.1.0-2ubuntu1 [2970 kB]
117s Get:19 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libubsan1 s390x 15.1.0-2ubuntu1 [1210 kB]
117s Get:20 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libgcc-14-dev s390x 14.2.0-22ubuntu1 [1037 kB]
117s Get:21 http://ftpmaster.internal/ubuntu questing-proposed/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-22ubuntu1 [18.7 MB]
118s Get:22 http://ftpmaster.internal/ubuntu questing-proposed/main s390x gcc-14 s390x 14.2.0-22ubuntu1 [536 kB]
118s Get:23 http://ftpmaster.internal/ubuntu questing/main s390x gcc-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1204 B]
118s Get:24 http://ftpmaster.internal/ubuntu questing/main s390x gcc s390x 4:14.2.0-1ubuntu1 [5004 B]
118s Get:25 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libstdc++-14-dev s390x 14.2.0-22ubuntu1 [2961 kB]
118s Get:26 http://ftpmaster.internal/ubuntu questing-proposed/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-22ubuntu1 [11.0 MB]
118s Get:27 http://ftpmaster.internal/ubuntu questing-proposed/main s390x g++-14 s390x 14.2.0-22ubuntu1 [24.0 kB]
118s Get:28 http://ftpmaster.internal/ubuntu questing/main s390x g++-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [956 B]
118s Get:29 http://ftpmaster.internal/ubuntu questing/main s390x g++ s390x 4:14.2.0-1ubuntu1 [1080 B]
118s Get:30 http://ftpmaster.internal/ubuntu questing/main s390x build-essential s390x 12.12ubuntu1 [5090 B]
118s Get:31 http://ftpmaster.internal/ubuntu questing/main s390x dctrl-tools s390x 2.24-3build3 [106 kB]
118s Get:32 http://ftpmaster.internal/ubuntu questing/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB]
118s Get:33 http://ftpmaster.internal/ubuntu questing/main s390x fonts-dejavu-mono all 2.37-8 [502 kB]
118s Get:34 http://ftpmaster.internal/ubuntu questing/main s390x fonts-dejavu-core all 2.37-8 [835 kB]
118s Get:35 http://ftpmaster.internal/ubuntu questing/main s390x fontconfig-config s390x 2.15.0-2.2ubuntu1 [37.9 kB]
118s Get:36 http://ftpmaster.internal/ubuntu questing/main s390x libfontconfig1 s390x 2.15.0-2.2ubuntu1 [150 kB]
118s Get:37 http://ftpmaster.internal/ubuntu questing/main s390x fontconfig s390x 2.15.0-2.2ubuntu1 [191 kB]
118s Get:38 http://ftpmaster.internal/ubuntu questing/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB]
118s Get:39 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-4 [119 kB]
118s Get:40 http://ftpmaster.internal/ubuntu questing/universe s390x fonts-lmodern all 2.005-1 [4799 kB]
118s Get:41 http://ftpmaster.internal/ubuntu questing/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB]
119s Get:42 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libgfortran5 s390x 15.1.0-2ubuntu1 [614 kB]
119s Get:43 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libgfortran-14-dev s390x 14.2.0-22ubuntu1 [653 kB]
119s Get:44 http://ftpmaster.internal/ubuntu questing-proposed/main s390x gfortran-14-s390x-linux-gnu s390x 14.2.0-22ubuntu1 [10.3 MB]
119s Get:45 http://ftpmaster.internal/ubuntu questing-proposed/main s390x gfortran-14 s390x 14.2.0-22ubuntu1 [14.4 kB]
119s Get:46 http://ftpmaster.internal/ubuntu questing/main s390x gfortran-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1012 B]
119s Get:47 http://ftpmaster.internal/ubuntu questing/main s390x gfortran s390x 4:14.2.0-1ubuntu1 [1160 B]
119s Get:48 http://ftpmaster.internal/ubuntu questing/main s390x icu-devtools s390x 76.1-1ubuntu2 [225 kB]
119s Get:49 http://ftpmaster.internal/ubuntu questing/main s390x javascript-common all 12 [5216 B]
119s Get:50 http://ftpmaster.internal/ubuntu questing/main s390x libio-string-perl all 1.08-4 [11.1 kB]
119s Get:51 http://ftpmaster.internal/ubuntu questing/universe s390x liblatex-tounicode-perl all 0.55-1 [28.8 kB]
119s Get:52 http://ftpmaster.internal/ubuntu questing/universe s390x libbibtex-parser-perl all 1.05+dfsg-1 [16.5 kB]
119s Get:53 http://ftpmaster.internal/ubuntu questing/main s390x libblas3 s390x 3.12.1-2 [252 kB]
119s Get:54 http://ftpmaster.internal/ubuntu questing/main s390x libblas-dev s390x 3.12.1-2 [254 kB]
119s Get:55 http://ftpmaster.internal/ubuntu questing/main s390x libbz2-dev s390x 1.0.8-6 [39.1 kB]
119s Get:56 http://ftpmaster.internal/ubuntu questing/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB]
119s Get:57 http://ftpmaster.internal/ubuntu questing/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB]
119s Get:58 http://ftpmaster.internal/ubuntu questing/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B]
119s Get:59 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libxrender1 s390x 1:0.9.12-1 [20.9 kB]
119s Get:60 http://ftpmaster.internal/ubuntu questing/main s390x libcairo2 s390x 1.18.4-1 [580 kB]
119s Get:61 http://ftpmaster.internal/ubuntu questing/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB]
119s Get:62 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libdeflate0 s390x 1.23-2 [46.0 kB]
119s Get:63 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libdeflate-dev s390x 1.23-2 [51.9 kB]
119s Get:64 http://ftpmaster.internal/ubuntu questing/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB]
119s Get:65 http://ftpmaster.internal/ubuntu questing/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB]
119s Get:66 http://ftpmaster.internal/ubuntu questing/main s390x x11-common all 1:7.7+23ubuntu4 [21.8 kB]
119s Get:67 http://ftpmaster.internal/ubuntu questing/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB]
119s Get:68 http://ftpmaster.internal/ubuntu questing/main s390x libicu-dev s390x 76.1-1ubuntu2 [12.2 MB]
120s Get:69 http://ftpmaster.internal/ubuntu questing/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB]
120s Get:70 http://ftpmaster.internal/ubuntu questing/main s390x libjpeg-turbo8-dev s390x 2.1.5-3ubuntu2 [281 kB]
120s Get:71 http://ftpmaster.internal/ubuntu questing/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B]
120s Get:72 http://ftpmaster.internal/ubuntu questing/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B]
120s Get:73 http://ftpmaster.internal/ubuntu questing/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B]
120s Get:74 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x libjs-bootstrap all 3.4.1+dfsg-4 [129 kB]
120s Get:75 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-popper.js all 1.16.1+ds-6 [54.1 kB]
120s Get:76 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB]
120s Get:77 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-d3 all 3.5.17-4 [132 kB]
120s Get:78 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-es5-shim all 4.6.7-2 [39.8 kB]
120s Get:79 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB]
120s Get:80 http://ftpmaster.internal/ubuntu questing/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
120s Get:81 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB]
120s Get:82 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
120s Get:83 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B]
120s Get:84 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
120s Get:85 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB]
120s Get:86 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-json all 0~20221030+~1.0.8-1 [20.6 kB]
120s Get:87 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-lunr all 2.3.9~dfsg-2 [66.8 kB]
120s Get:88 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB]
120s Get:89 http://ftpmaster.internal/ubuntu questing/universe s390x libkpathsea6 s390x 2024.20240313.70630+ds-6 [67.0 kB]
120s Get:90 http://ftpmaster.internal/ubuntu questing/main s390x liblapack3 s390x 3.12.1-2 [2971 kB]
120s Get:91 http://ftpmaster.internal/ubuntu questing/main s390x liblapack-dev s390x 3.12.1-2 [5967 kB]
121s Get:92 http://ftpmaster.internal/ubuntu questing/main s390x liblua5.4-0 s390x 5.4.7-1 [174 kB]
121s Get:93 http://ftpmaster.internal/ubuntu questing/universe s390x libmpfi0 s390x 1.5.4+ds-4 [34.1 kB]
121s Get:94 http://ftpmaster.internal/ubuntu questing/main s390x libncurses-dev s390x 6.5+20250216-2 [407 kB]
121s Get:95 http://ftpmaster.internal/ubuntu questing/main s390x libthai-data all 0.1.29-2build1 [158 kB]
121s Get:96 http://ftpmaster.internal/ubuntu questing/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB]
121s Get:97 http://ftpmaster.internal/ubuntu questing/main s390x libpango-1.0-0 s390x 1.56.3-1 [254 kB]
121s Get:98 http://ftpmaster.internal/ubuntu questing/main s390x libpangoft2-1.0-0 s390x 1.56.3-1 [50.5 kB]
121s Get:99 http://ftpmaster.internal/ubuntu questing/main s390x libpangocairo-1.0-0 s390x 1.56.3-1 [28.2 kB]
121s Get:100 http://ftpmaster.internal/ubuntu questing/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB]
121s Get:101 http://ftpmaster.internal/ubuntu questing/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB]
121s Get:102 http://ftpmaster.internal/ubuntu questing/main s390x libpcre2-16-0 s390x 10.45-1 [259 kB]
121s Get:103 http://ftpmaster.internal/ubuntu questing/main s390x libpcre2-32-0 s390x 10.45-1 [245 kB]
121s Get:104 http://ftpmaster.internal/ubuntu questing/main s390x libpcre2-posix3 s390x 10.45-1 [7080 B]
121s Get:105 http://ftpmaster.internal/ubuntu questing/main s390x libpcre2-dev s390x 10.45-1 [899 kB]
121s Get:106 http://ftpmaster.internal/ubuntu questing/main s390x libpkgconf3 s390x 1.8.1-4 [31.2 kB]
121s Get:107 http://ftpmaster.internal/ubuntu questing/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB]
121s Get:108 http://ftpmaster.internal/ubuntu questing/main s390x libpng-dev s390x 1.6.47-1.1 [278 kB]
121s Get:109 http://ftpmaster.internal/ubuntu questing/universe s390x libpotrace0 s390x 1.16-2build1 [18.7 kB]
121s Get:110 http://ftpmaster.internal/ubuntu questing/universe s390x libptexenc1 s390x 2024.20240313.70630+ds-6 [43.4 kB]
121s Get:111 http://ftpmaster.internal/ubuntu questing/main s390x libreadline-dev s390x 8.2-6 [187 kB]
121s Get:112 http://ftpmaster.internal/ubuntu questing/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB]
121s Get:113 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libsm6 s390x 2:1.2.6-1 [18.3 kB]
121s Get:114 http://ftpmaster.internal/ubuntu questing/universe s390x libsynctex2 s390x 2024.20240313.70630+ds-6 [64.8 kB]
121s Get:115 http://ftpmaster.internal/ubuntu questing/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB]
121s Get:116 http://ftpmaster.internal/ubuntu questing/universe s390x libteckit0 s390x 2.5.12+ds1-1 [433 kB]
122s Get:117 http://ftpmaster.internal/ubuntu questing/universe s390x libtexlua53-5 s390x 2024.20240313.70630+ds-6 [131 kB]
122s Get:118 http://ftpmaster.internal/ubuntu questing/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB]
122s Get:119 http://ftpmaster.internal/ubuntu questing/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB]
122s Get:120 http://ftpmaster.internal/ubuntu questing/main s390x libtiff6 s390x 4.7.0-3ubuntu1 [219 kB]
122s Get:121 http://ftpmaster.internal/ubuntu questing/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB]
122s Get:122 http://ftpmaster.internal/ubuntu questing/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B]
122s Get:123 http://ftpmaster.internal/ubuntu questing/main s390x libtk8.6 s390x 8.6.16-1 [830 kB]
122s Get:124 http://ftpmaster.internal/ubuntu questing/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB]
122s Get:125 http://ftpmaster.internal/ubuntu questing/main s390x libxmu6 s390x 2:1.1.3-3build2 [53.0 kB]
122s Get:126 http://ftpmaster.internal/ubuntu questing/main s390x libxpm4 s390x 1:3.5.17-1build2 [41.2 kB]
122s Get:127 http://ftpmaster.internal/ubuntu questing/main s390x libxaw7 s390x 2:1.0.16-1 [201 kB]
122s Get:128 http://ftpmaster.internal/ubuntu questing/main s390x libxi6 s390x 2:1.8.2-1 [35.4 kB]
122s Get:129 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libzstd-dev s390x 1.5.7+dfsg-1 [415 kB]
122s Get:130 http://ftpmaster.internal/ubuntu questing/universe s390x libzzip-0-13t64 s390x 0.13.78+dfsg.1-0.1 [29.8 kB]
122s Get:131 http://ftpmaster.internal/ubuntu questing/main s390x zip s390x 3.0-14ubuntu2 [187 kB]
122s Get:132 http://ftpmaster.internal/ubuntu questing/main s390x unzip s390x 6.0-28ubuntu6 [186 kB]
122s Get:133 http://ftpmaster.internal/ubuntu questing/main s390x xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
122s Get:134 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x r-base-core s390x 4.5.0-3 [29.0 MB]
123s Get:135 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x r-cran-littler s390x 0.3.21-1 [97.4 kB]
123s Get:136 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x littler all 0.3.21-1 [2584 B]
123s Get:137 http://ftpmaster.internal/ubuntu questing/universe s390x node-bootstrap-sass all 3.4.3-2 [187 kB]
123s Get:138 http://ftpmaster.internal/ubuntu questing/universe s390x node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
123s Get:139 http://ftpmaster.internal/ubuntu questing/universe s390x node-normalize.css all 8.0.1-5 [10.8 kB]
123s Get:140 http://ftpmaster.internal/ubuntu questing/universe s390x pandoc-data all 3.1.11.1-3build1 [78.8 kB]
123s Get:141 http://ftpmaster.internal/ubuntu questing/universe s390x pandoc s390x 3.1.11.1+ds-2 [52.5 MB]
124s Get:142 http://ftpmaster.internal/ubuntu questing/main s390x liblzma-dev s390x 5.6.4-1ubuntu1 [184 kB]
124s Get:143 http://ftpmaster.internal/ubuntu questing/main s390x pkgconf-bin s390x 1.8.1-4 [21.5 kB]
124s Get:144 http://ftpmaster.internal/ubuntu questing/main s390x pkgconf s390x 1.8.1-4 [16.7 kB]
124s Get:145 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libtirpc-dev s390x 1.3.6+ds-1 [196 kB]
124s Get:146 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x r-base-dev all 4.5.0-3 [4188 B]
124s Get:147 http://ftpmaster.internal/ubuntu questing/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
124s Get:148 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-biocgenerics all 0.52.0-2 [624 kB]
124s Get:149 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-base64enc s390x 0.1-3-3 [28.0 kB]
124s Get:150 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-digest s390x 0.6.37-1 [205 kB]
124s Get:151 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-fastmap s390x 1.2.0-1 [72.4 kB]
124s Get:152 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x r-cran-rlang s390x 1.1.5-3 [1711 kB]
124s Get:153 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-htmltools s390x 0.5.8.1-1 [372 kB]
124s Get:154 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-evaluate all 1.0.3-1 [114 kB]
124s Get:155 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-xfun s390x 0.51+dfsg-1 [574 kB]
125s Get:156 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-highr all 0.11+dfsg-1 [38.5 kB]
125s Get:157 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-yaml s390x 2.3.10-1 [113 kB]
125s Get:158 http://ftpmaster.internal/ubuntu questing/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB]
125s Get:159 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-knitr all 1.50+dfsg-1 [840 kB]
125s Get:160 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-cachem s390x 1.1.0-1 [74.0 kB]
125s Get:161 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB]
125s Get:162 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-jsonlite s390x 1.9.1+dfsg-1 [447 kB]
125s Get:163 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-cli s390x 3.6.4-1 [1379 kB]
125s Get:164 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-glue s390x 1.8.0-1 [164 kB]
125s Get:165 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
125s Get:166 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-memoise all 2.0.1-1 [53.9 kB]
125s Get:167 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-mime s390x 0.12-2 [35.8 kB]
125s Get:168 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-fs s390x 1.6.5+dfsg-1 [245 kB]
125s Get:169 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-r6 all 2.6.1-1 [101 kB]
125s Get:170 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-rappdirs s390x 0.3.3-1 [47.5 kB]
125s Get:171 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-sass s390x 0.4.9+dfsg-1 [1019 kB]
125s Get:172 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x r-cran-bslib all 0.9.0+dfsg-3 [4562 kB]
125s Get:173 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-fontawesome all 0.5.3-1 [1331 kB]
125s Get:174 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-tinytex all 0.56-1 [148 kB]
125s Get:175 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-modernizr all 3.13.0-0.1 [101 kB]
125s Get:176 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
125s Get:177 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-rcpp s390x 1.0.14-1 [2003 kB]
125s Get:178 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-later s390x 1.4.1+dfsg-1 [148 kB]
125s Get:179 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB]
125s Get:180 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-promises s390x 1.3.2+dfsg-1 [296 kB]
125s Get:181 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-httpuv s390x 1.6.15+dfsg-1 [507 kB]
125s Get:182 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-xtable all 1:1.8-4-2 [689 kB]
125s Get:183 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-sourcetools s390x 0.1.7-1-1 [47.1 kB]
125s Get:184 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-crayon all 1.5.3-1 [165 kB]
125s Get:185 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-withr all 3.0.2+dfsg-1 [214 kB]
125s Get:186 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-commonmark s390x 1.9.5-1 [142 kB]
125s Get:187 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
125s Get:188 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-shiny all 1.10.0+dfsg-2 [3124 kB]
125s Get:189 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB]
125s Get:190 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-bookdown all 0.42+dfsg-1 [1409 kB]
125s Get:191 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB]
125s Get:192 http://ftpmaster.internal/ubuntu questing/universe s390x tex-common all 6.19 [29.8 kB]
125s Get:193 http://ftpmaster.internal/ubuntu questing/main s390x t1utils s390x 1.41-4build3 [65.6 kB]
125s Get:194 http://ftpmaster.internal/ubuntu questing/universe s390x texlive-binaries s390x 2024.20240313.70630+ds-6 [9170 kB]
126s Get:195 http://ftpmaster.internal/ubuntu questing/universe s390x texlive-base all 2024.20250309-1 [22.7 MB]
126s Get:196 http://ftpmaster.internal/ubuntu questing/universe s390x texlive-latex-base all 2024.20250309-1 [1276 kB]
126s Get:197 http://ftpmaster.internal/ubuntu questing/universe s390x texlive-bibtex-extra all 2024.20250309-2 [79.3 MB]
130s Get:198 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-biocversion all 3.20.0-2 [11.1 kB]
130s Get:199 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-biocstyle all 2.34.0+dfsg-1 [451 kB]
130s Get:200 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-s4vectors s390x 0.44.0+dfsg-2 [2063 kB]
130s Get:201 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x r-bioc-iranges s390x 2.40.1-3 [2300 kB]
130s Get:202 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB]
130s Get:203 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-xvector s390x 0.46.0-2 [624 kB]
130s Get:204 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-curl s390x 6.2.1+dfsg-1ubuntu1 [196 kB]
130s Get:205 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-sys s390x 3.4.3-1 [45.2 kB]
130s Get:206 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-askpass s390x 1.2.1-1 [24.8 kB]
130s Get:207 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-openssl s390x 2.3.2+dfsg-1 [406 kB]
130s Get:208 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-httr all 1.4.7+dfsg-1 [459 kB]
130s Get:209 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB]
130s Get:210 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB]
131s Get:211 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB]
132s Get:212 http://ftpmaster.internal/ubuntu questing/universe s390x r-bioc-biostrings s390x 2.74.1+dfsg-2 [13.3 MB]
132s Get:213 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-png s390x 0.1-8-1build2 [41.5 kB]
132s Get:214 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x r-bioc-keggrest all 1.46.0+dfsg-3 [183 kB]
132s Get:215 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-markdown all 1.13-1 [162 kB]
132s Get:216 http://ftpmaster.internal/ubuntu questing/universe s390x r-cran-runit all 0.4.33-1 [377 kB]
132s Get:217 http://ftpmaster.internal/ubuntu questing-proposed/main s390x zstd s390x 1.5.7+dfsg-1 [722 kB]
133s Preconfiguring packages ...
133s Fetched 371 MB in 16s (23.3 MB/s)
133s (Reading database ... 
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133s Preparing to unpack .../gcc-15-base_15.1.0-2ubuntu1_s390x.deb ...
133s Unpacking gcc-15-base:s390x (15.1.0-2ubuntu1) over (15-20250404-0ubuntu1) ...
133s Setting up gcc-15-base:s390x (15.1.0-2ubuntu1) ...
133s (Reading database ... 
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133s Preparing to unpack .../libgcc-s1_15.1.0-2ubuntu1_s390x.deb ...
133s Unpacking libgcc-s1:s390x (15.1.0-2ubuntu1) over (15-20250404-0ubuntu1) ...
133s Setting up libgcc-s1:s390x (15.1.0-2ubuntu1) ...
133s (Reading database ... 
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133s Preparing to unpack .../libatomic1_15.1.0-2ubuntu1_s390x.deb ...
133s Unpacking libatomic1:s390x (15.1.0-2ubuntu1) over (15-20250404-0ubuntu1) ...
133s Preparing to unpack .../libstdc++6_15.1.0-2ubuntu1_s390x.deb ...
133s Unpacking libstdc++6:s390x (15.1.0-2ubuntu1) over (15-20250404-0ubuntu1) ...
134s Setting up libstdc++6:s390x (15.1.0-2ubuntu1) ...
134s (Reading database ... 
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134s Preparing to unpack .../libzstd1_1.5.7+dfsg-1_s390x.deb ...
134s Unpacking libzstd1:s390x (1.5.7+dfsg-1) over (1.5.6+dfsg-2) ...
134s Setting up libzstd1:s390x (1.5.7+dfsg-1) ...
134s (Reading database ... 
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134s Preparing to unpack .../000-gcc-14-base_14.2.0-22ubuntu1_s390x.deb ...
134s Unpacking gcc-14-base:s390x (14.2.0-22ubuntu1) over (14.2.0-19ubuntu2) ...
134s Preparing to unpack .../001-libtirpc-common_1.3.6+ds-1_all.deb ...
134s Unpacking libtirpc-common (1.3.6+ds-1) over (1.3.4+ds-1.3) ...
134s Preparing to unpack .../002-libtirpc3t64_1.3.6+ds-1_s390x.deb ...
134s Unpacking libtirpc3t64:s390x (1.3.6+ds-1) over (1.3.4+ds-1.3) ...
134s Selecting previously unselected package libisl23:s390x.
134s Preparing to unpack .../003-libisl23_0.27-1_s390x.deb ...
134s Unpacking libisl23:s390x (0.27-1) ...
134s Selecting previously unselected package libmpc3:s390x.
134s Preparing to unpack .../004-libmpc3_1.3.1-1build2_s390x.deb ...
134s Unpacking libmpc3:s390x (1.3.1-1build2) ...
134s Selecting previously unselected package cpp-14-s390x-linux-gnu.
134s Preparing to unpack .../005-cpp-14-s390x-linux-gnu_14.2.0-22ubuntu1_s390x.deb ...
134s Unpacking cpp-14-s390x-linux-gnu (14.2.0-22ubuntu1) ...
134s Selecting previously unselected package cpp-14.
134s Preparing to unpack .../006-cpp-14_14.2.0-22ubuntu1_s390x.deb ...
134s Unpacking cpp-14 (14.2.0-22ubuntu1) ...
134s Selecting previously unselected package cpp-s390x-linux-gnu.
134s Preparing to unpack .../007-cpp-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
134s Unpacking cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
134s Selecting previously unselected package cpp.
134s Preparing to unpack .../008-cpp_4%3a14.2.0-1ubuntu1_s390x.deb ...
134s Unpacking cpp (4:14.2.0-1ubuntu1) ...
134s Selecting previously unselected package libcc1-0:s390x.
134s Preparing to unpack .../009-libcc1-0_15.1.0-2ubuntu1_s390x.deb ...
134s Unpacking libcc1-0:s390x (15.1.0-2ubuntu1) ...
134s Selecting previously unselected package libgomp1:s390x.
134s Preparing to unpack .../010-libgomp1_15.1.0-2ubuntu1_s390x.deb ...
134s Unpacking libgomp1:s390x (15.1.0-2ubuntu1) ...
134s Selecting previously unselected package libitm1:s390x.
134s Preparing to unpack .../011-libitm1_15.1.0-2ubuntu1_s390x.deb ...
134s Unpacking libitm1:s390x (15.1.0-2ubuntu1) ...
134s Selecting previously unselected package libasan8:s390x.
134s Preparing to unpack .../012-libasan8_15.1.0-2ubuntu1_s390x.deb ...
134s Unpacking libasan8:s390x (15.1.0-2ubuntu1) ...
134s Selecting previously unselected package libubsan1:s390x.
134s Preparing to unpack .../013-libubsan1_15.1.0-2ubuntu1_s390x.deb ...
134s Unpacking libubsan1:s390x (15.1.0-2ubuntu1) ...
134s Selecting previously unselected package libgcc-14-dev:s390x.
134s Preparing to unpack .../014-libgcc-14-dev_14.2.0-22ubuntu1_s390x.deb ...
134s Unpacking libgcc-14-dev:s390x (14.2.0-22ubuntu1) ...
134s Selecting previously unselected package gcc-14-s390x-linux-gnu.
134s Preparing to unpack .../015-gcc-14-s390x-linux-gnu_14.2.0-22ubuntu1_s390x.deb ...
134s Unpacking gcc-14-s390x-linux-gnu (14.2.0-22ubuntu1) ...
134s Selecting previously unselected package gcc-14.
134s Preparing to unpack .../016-gcc-14_14.2.0-22ubuntu1_s390x.deb ...
134s Unpacking gcc-14 (14.2.0-22ubuntu1) ...
134s Selecting previously unselected package gcc-s390x-linux-gnu.
134s Preparing to unpack .../017-gcc-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
134s Unpacking gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
134s Selecting previously unselected package gcc.
134s Preparing to unpack .../018-gcc_4%3a14.2.0-1ubuntu1_s390x.deb ...
134s Unpacking gcc (4:14.2.0-1ubuntu1) ...
134s Selecting previously unselected package libstdc++-14-dev:s390x.
134s Preparing to unpack .../019-libstdc++-14-dev_14.2.0-22ubuntu1_s390x.deb ...
134s Unpacking libstdc++-14-dev:s390x (14.2.0-22ubuntu1) ...
135s Selecting previously unselected package g++-14-s390x-linux-gnu.
135s Preparing to unpack .../020-g++-14-s390x-linux-gnu_14.2.0-22ubuntu1_s390x.deb ...
135s Unpacking g++-14-s390x-linux-gnu (14.2.0-22ubuntu1) ...
135s Selecting previously unselected package g++-14.
135s Preparing to unpack .../021-g++-14_14.2.0-22ubuntu1_s390x.deb ...
135s Unpacking g++-14 (14.2.0-22ubuntu1) ...
135s Selecting previously unselected package g++-s390x-linux-gnu.
135s Preparing to unpack .../022-g++-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
135s Unpacking g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
135s Selecting previously unselected package g++.
135s Preparing to unpack .../023-g++_4%3a14.2.0-1ubuntu1_s390x.deb ...
135s Unpacking g++ (4:14.2.0-1ubuntu1) ...
135s Selecting previously unselected package build-essential.
135s Preparing to unpack .../024-build-essential_12.12ubuntu1_s390x.deb ...
135s Unpacking build-essential (12.12ubuntu1) ...
135s Selecting previously unselected package dctrl-tools.
135s Preparing to unpack .../025-dctrl-tools_2.24-3build3_s390x.deb ...
135s Unpacking dctrl-tools (2.24-3build3) ...
135s Selecting previously unselected package libfreetype6:s390x.
135s Preparing to unpack .../026-libfreetype6_2.13.3+dfsg-1_s390x.deb ...
135s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ...
135s Selecting previously unselected package fonts-dejavu-mono.
135s Preparing to unpack .../027-fonts-dejavu-mono_2.37-8_all.deb ...
135s Unpacking fonts-dejavu-mono (2.37-8) ...
135s Selecting previously unselected package fonts-dejavu-core.
135s Preparing to unpack .../028-fonts-dejavu-core_2.37-8_all.deb ...
135s Unpacking fonts-dejavu-core (2.37-8) ...
135s Selecting previously unselected package fontconfig-config.
135s Preparing to unpack .../029-fontconfig-config_2.15.0-2.2ubuntu1_s390x.deb ...
135s Unpacking fontconfig-config (2.15.0-2.2ubuntu1) ...
135s Selecting previously unselected package libfontconfig1:s390x.
135s Preparing to unpack .../030-libfontconfig1_2.15.0-2.2ubuntu1_s390x.deb ...
135s Unpacking libfontconfig1:s390x (2.15.0-2.2ubuntu1) ...
135s Selecting previously unselected package fontconfig.
135s Preparing to unpack .../031-fontconfig_2.15.0-2.2ubuntu1_s390x.deb ...
135s Unpacking fontconfig (2.15.0-2.2ubuntu1) ...
135s Selecting previously unselected package fonts-font-awesome.
135s Preparing to unpack .../032-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ...
135s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ...
135s Selecting previously unselected package fonts-glyphicons-halflings.
135s Preparing to unpack .../033-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-4_all.deb ...
135s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-4) ...
135s Selecting previously unselected package fonts-lmodern.
135s Preparing to unpack .../034-fonts-lmodern_2.005-1_all.deb ...
135s Unpacking fonts-lmodern (2.005-1) ...
135s Selecting previously unselected package fonts-mathjax.
135s Preparing to unpack .../035-fonts-mathjax_2.7.9+dfsg-1_all.deb ...
135s Unpacking fonts-mathjax (2.7.9+dfsg-1) ...
135s Selecting previously unselected package libgfortran5:s390x.
135s Preparing to unpack .../036-libgfortran5_15.1.0-2ubuntu1_s390x.deb ...
135s Unpacking libgfortran5:s390x (15.1.0-2ubuntu1) ...
135s Selecting previously unselected package libgfortran-14-dev:s390x.
135s Preparing to unpack .../037-libgfortran-14-dev_14.2.0-22ubuntu1_s390x.deb ...
135s Unpacking libgfortran-14-dev:s390x (14.2.0-22ubuntu1) ...
135s Selecting previously unselected package gfortran-14-s390x-linux-gnu.
135s Preparing to unpack .../038-gfortran-14-s390x-linux-gnu_14.2.0-22ubuntu1_s390x.deb ...
135s Unpacking gfortran-14-s390x-linux-gnu (14.2.0-22ubuntu1) ...
136s Selecting previously unselected package gfortran-14.
136s Preparing to unpack .../039-gfortran-14_14.2.0-22ubuntu1_s390x.deb ...
136s Unpacking gfortran-14 (14.2.0-22ubuntu1) ...
136s Selecting previously unselected package gfortran-s390x-linux-gnu.
136s Preparing to unpack .../040-gfortran-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
136s Unpacking gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
136s Selecting previously unselected package gfortran.
136s Preparing to unpack .../041-gfortran_4%3a14.2.0-1ubuntu1_s390x.deb ...
136s Unpacking gfortran (4:14.2.0-1ubuntu1) ...
136s Selecting previously unselected package icu-devtools.
136s Preparing to unpack .../042-icu-devtools_76.1-1ubuntu2_s390x.deb ...
136s Unpacking icu-devtools (76.1-1ubuntu2) ...
136s Selecting previously unselected package javascript-common.
136s Preparing to unpack .../043-javascript-common_12_all.deb ...
136s Unpacking javascript-common (12) ...
136s Selecting previously unselected package libio-string-perl.
136s Preparing to unpack .../044-libio-string-perl_1.08-4_all.deb ...
136s Unpacking libio-string-perl (1.08-4) ...
136s Selecting previously unselected package liblatex-tounicode-perl.
136s Preparing to unpack .../045-liblatex-tounicode-perl_0.55-1_all.deb ...
136s Unpacking liblatex-tounicode-perl (0.55-1) ...
136s Selecting previously unselected package libbibtex-parser-perl.
136s Preparing to unpack .../046-libbibtex-parser-perl_1.05+dfsg-1_all.deb ...
136s Unpacking libbibtex-parser-perl (1.05+dfsg-1) ...
136s Selecting previously unselected package libblas3:s390x.
136s Preparing to unpack .../047-libblas3_3.12.1-2_s390x.deb ...
136s Unpacking libblas3:s390x (3.12.1-2) ...
136s Selecting previously unselected package libblas-dev:s390x.
136s Preparing to unpack .../048-libblas-dev_3.12.1-2_s390x.deb ...
136s Unpacking libblas-dev:s390x (3.12.1-2) ...
136s Selecting previously unselected package libbz2-dev:s390x.
136s Preparing to unpack .../049-libbz2-dev_1.0.8-6_s390x.deb ...
136s Unpacking libbz2-dev:s390x (1.0.8-6) ...
136s Selecting previously unselected package libpixman-1-0:s390x.
136s Preparing to unpack .../050-libpixman-1-0_0.44.0-3_s390x.deb ...
136s Unpacking libpixman-1-0:s390x (0.44.0-3) ...
136s Selecting previously unselected package libxcb-render0:s390x.
136s Preparing to unpack .../051-libxcb-render0_1.17.0-2_s390x.deb ...
136s Unpacking libxcb-render0:s390x (1.17.0-2) ...
136s Selecting previously unselected package libxcb-shm0:s390x.
136s Preparing to unpack .../052-libxcb-shm0_1.17.0-2_s390x.deb ...
136s Unpacking libxcb-shm0:s390x (1.17.0-2) ...
136s Selecting previously unselected package libxrender1:s390x.
136s Preparing to unpack .../053-libxrender1_1%3a0.9.12-1_s390x.deb ...
136s Unpacking libxrender1:s390x (1:0.9.12-1) ...
136s Selecting previously unselected package libcairo2:s390x.
136s Preparing to unpack .../054-libcairo2_1.18.4-1_s390x.deb ...
136s Unpacking libcairo2:s390x (1.18.4-1) ...
136s Selecting previously unselected package libdatrie1:s390x.
136s Preparing to unpack .../055-libdatrie1_0.2.13-3build1_s390x.deb ...
136s Unpacking libdatrie1:s390x (0.2.13-3build1) ...
136s Selecting previously unselected package libdeflate0:s390x.
136s Preparing to unpack .../056-libdeflate0_1.23-2_s390x.deb ...
136s Unpacking libdeflate0:s390x (1.23-2) ...
136s Selecting previously unselected package libdeflate-dev:s390x.
136s Preparing to unpack .../057-libdeflate-dev_1.23-2_s390x.deb ...
136s Unpacking libdeflate-dev:s390x (1.23-2) ...
136s Selecting previously unselected package libgraphite2-3:s390x.
136s Preparing to unpack .../058-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ...
136s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
136s Selecting previously unselected package libharfbuzz0b:s390x.
136s Preparing to unpack .../059-libharfbuzz0b_10.2.0-1_s390x.deb ...
136s Unpacking libharfbuzz0b:s390x (10.2.0-1) ...
136s Selecting previously unselected package x11-common.
136s Preparing to unpack .../060-x11-common_1%3a7.7+23ubuntu4_all.deb ...
136s Unpacking x11-common (1:7.7+23ubuntu4) ...
136s Selecting previously unselected package libice6:s390x.
136s Preparing to unpack .../061-libice6_2%3a1.1.1-1_s390x.deb ...
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141s Selecting previously unselected package r-cran-r6.
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141s Unpacking r-cran-r6 (2.6.1-1) ...
141s Selecting previously unselected package r-cran-rappdirs.
141s Preparing to unpack .../164-r-cran-rappdirs_0.3.3-1_s390x.deb ...
141s Unpacking r-cran-rappdirs (0.3.3-1) ...
141s Selecting previously unselected package r-cran-sass.
141s Preparing to unpack .../165-r-cran-sass_0.4.9+dfsg-1_s390x.deb ...
141s Unpacking r-cran-sass (0.4.9+dfsg-1) ...
141s Selecting previously unselected package r-cran-bslib.
141s Preparing to unpack .../166-r-cran-bslib_0.9.0+dfsg-3_all.deb ...
141s Unpacking r-cran-bslib (0.9.0+dfsg-3) ...
141s Selecting previously unselected package r-cran-fontawesome.
141s Preparing to unpack .../167-r-cran-fontawesome_0.5.3-1_all.deb ...
141s Unpacking r-cran-fontawesome (0.5.3-1) ...
141s Selecting previously unselected package r-cran-tinytex.
141s Preparing to unpack .../168-r-cran-tinytex_0.56-1_all.deb ...
141s Unpacking r-cran-tinytex (0.56-1) ...
141s Selecting previously unselected package libjs-modernizr.
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141s Unpacking libjs-modernizr (3.13.0-0.1) ...
141s Selecting previously unselected package r-cran-pkgkitten.
141s Preparing to unpack .../170-r-cran-pkgkitten_0.2.4-1_all.deb ...
141s Unpacking r-cran-pkgkitten (0.2.4-1) ...
141s Selecting previously unselected package r-cran-rcpp.
141s Preparing to unpack .../171-r-cran-rcpp_1.0.14-1_s390x.deb ...
141s Unpacking r-cran-rcpp (1.0.14-1) ...
141s Selecting previously unselected package r-cran-later.
141s Preparing to unpack .../172-r-cran-later_1.4.1+dfsg-1_s390x.deb ...
141s Unpacking r-cran-later (1.4.1+dfsg-1) ...
141s Selecting previously unselected package r-cran-magrittr.
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141s Unpacking r-cran-magrittr (2.0.3-1) ...
141s Selecting previously unselected package r-cran-promises.
141s Preparing to unpack .../174-r-cran-promises_1.3.2+dfsg-1_s390x.deb ...
141s Unpacking r-cran-promises (1.3.2+dfsg-1) ...
141s Selecting previously unselected package r-cran-httpuv.
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141s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ...
141s Selecting previously unselected package r-cran-xtable.
141s Preparing to unpack .../176-r-cran-xtable_1%3a1.8-4-2_all.deb ...
141s Unpacking r-cran-xtable (1:1.8-4-2) ...
141s Selecting previously unselected package r-cran-sourcetools.
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141s Selecting previously unselected package r-cran-crayon.
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141s Selecting previously unselected package r-cran-withr.
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141s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
141s Selecting previously unselected package r-cran-commonmark.
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141s Unpacking r-cran-commonmark (1.9.5-1) ...
141s Selecting previously unselected package libjs-twitter-bootstrap-datepicker.
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141s Selecting previously unselected package r-cran-shiny.
141s Preparing to unpack .../182-r-cran-shiny_1.10.0+dfsg-2_all.deb ...
141s Unpacking r-cran-shiny (1.10.0+dfsg-2) ...
141s Selecting previously unselected package r-cran-rmarkdown.
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141s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ...
141s Selecting previously unselected package r-cran-bookdown.
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141s Unpacking r-cran-bookdown (0.42+dfsg-1) ...
141s Selecting previously unselected package r-cran-biocmanager.
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141s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ...
141s Selecting previously unselected package tex-common.
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141s Selecting previously unselected package t1utils.
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141s Selecting previously unselected package texlive-binaries.
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141s Unpacking texlive-binaries (2024.20240313.70630+ds-6) ...
142s Selecting previously unselected package texlive-base.
142s Preparing to unpack .../189-texlive-base_2024.20250309-1_all.deb ...
142s Unpacking texlive-base (2024.20250309-1) ...
143s Selecting previously unselected package texlive-latex-base.
143s Preparing to unpack .../190-texlive-latex-base_2024.20250309-1_all.deb ...
143s Unpacking texlive-latex-base (2024.20250309-1) ...
143s Selecting previously unselected package texlive-bibtex-extra.
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143s Unpacking texlive-bibtex-extra (2024.20250309-2) ...
146s Selecting previously unselected package r-bioc-biocversion.
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146s Unpacking r-bioc-biocversion (3.20.0-2) ...
146s Selecting previously unselected package r-bioc-biocstyle.
146s Preparing to unpack .../193-r-bioc-biocstyle_2.34.0+dfsg-1_all.deb ...
146s Unpacking r-bioc-biocstyle (2.34.0+dfsg-1) ...
146s Selecting previously unselected package r-bioc-s4vectors.
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146s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ...
146s Selecting previously unselected package r-bioc-iranges.
146s Preparing to unpack .../195-r-bioc-iranges_2.40.1-3_s390x.deb ...
146s Unpacking r-bioc-iranges (2.40.1-3) ...
146s Selecting previously unselected package r-bioc-zlibbioc.
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146s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ...
146s Selecting previously unselected package r-bioc-xvector.
146s Preparing to unpack .../197-r-bioc-xvector_0.46.0-2_s390x.deb ...
146s Unpacking r-bioc-xvector (0.46.0-2) ...
146s Selecting previously unselected package r-cran-curl.
146s Preparing to unpack .../198-r-cran-curl_6.2.1+dfsg-1ubuntu1_s390x.deb ...
146s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ...
146s Selecting previously unselected package r-cran-sys.
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146s Unpacking r-cran-sys (3.4.3-1) ...
146s Selecting previously unselected package r-cran-askpass.
146s Preparing to unpack .../200-r-cran-askpass_1.2.1-1_s390x.deb ...
146s Unpacking r-cran-askpass (1.2.1-1) ...
146s Selecting previously unselected package r-cran-openssl.
146s Preparing to unpack .../201-r-cran-openssl_2.3.2+dfsg-1_s390x.deb ...
146s Unpacking r-cran-openssl (2.3.2+dfsg-1) ...
147s Selecting previously unselected package r-cran-httr.
147s Preparing to unpack .../202-r-cran-httr_1.4.7+dfsg-1_all.deb ...
147s Unpacking r-cran-httr (1.4.7+dfsg-1) ...
147s Selecting previously unselected package r-bioc-ucsc.utils.
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147s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ...
147s Selecting previously unselected package r-bioc-genomeinfodbdata.
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147s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ...
147s Selecting previously unselected package r-bioc-genomeinfodb.
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147s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ...
147s Selecting previously unselected package r-bioc-biostrings.
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147s Selecting previously unselected package r-cran-png.
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147s Selecting previously unselected package r-bioc-keggrest.
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147s Selecting previously unselected package r-cran-markdown.
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147s Selecting previously unselected package r-cran-runit.
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147s Unpacking zstd (1.5.7+dfsg-1) over (1.5.6+dfsg-2) ...
147s Setting up libjs-json (0~20221030+~1.0.8-1) ...
147s Setting up javascript-common (12) ...
147s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
147s Setting up libpixman-1-0:s390x (0.44.0-3) ...
147s Setting up libsharpyuv0:s390x (1.5.0-0.1) ...
147s Setting up libncurses-dev:s390x (6.5+20250216-2) ...
147s Setting up fonts-mathjax (2.7.9+dfsg-1) ...
147s Setting up libzstd-dev:s390x (1.5.7+dfsg-1) ...
147s Setting up libxpm4:s390x (1:3.5.17-1build2) ...
147s Setting up libjs-mathjax (2.7.9+dfsg-1) ...
147s Setting up libxi6:s390x (2:1.8.2-1) ...
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147s Setting up libdatrie1:s390x (0.2.13-3build1) ...
147s Setting up libjs-popper.js (1.16.1+ds-6) ...
147s Setting up gcc-14-base:s390x (14.2.0-22ubuntu1) ...
147s Setting up libxcb-render0:s390x (1.17.0-2) ...
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147s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-4) ...
147s Setting up libtirpc-common (1.3.6+ds-1) ...
147s Setting up libjs-lunr (2.3.9~dfsg-2) ...
147s Setting up unzip (6.0-28ubuntu6) ...
147s Setting up liblatex-tounicode-perl (0.55-1) ...
147s Setting up x11-common (1:7.7+23ubuntu4) ...
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147s Setting up libreadline-dev:s390x (8.2-6) ...
147s Setting up libgomp1:s390x (15.1.0-2ubuntu1) ...
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147s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ...
147s Setting up libpcre2-16-0:s390x (10.45-1) ...
147s Setting up libjs-es5-shim (4.6.7-2) ...
147s Setting up tex-common (6.19) ...
147s update-language: texlive-base not installed and configured, doing nothing!
147s Setting up libio-string-perl (1.08-4) ...
147s Setting up zip (3.0-14ubuntu2) ...
147s Setting up libpcre2-32-0:s390x (10.45-1) ...
147s Setting up libblas3:s390x (3.12.1-2) ...
147s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
147s Setting up libpkgconf3:s390x (1.8.1-4) ...
147s Setting up libzzip-0-13t64:s390x (0.13.78+dfsg.1-0.1) ...
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147s Setting up libatomic1:s390x (15.1.0-2ubuntu1) ...
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147s Setting up pkgconf-bin (1.8.1-4) ...
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147s Setting up libkpathsea6:s390x (2024.20240313.70630+ds-6) ...
147s Setting up libgfortran5:s390x (15.1.0-2ubuntu1) ...
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147s Setting up node-bootstrap-sass (3.4.3-2) ...
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147s Setting up xdg-utils (1.2.1-2ubuntu1) ...
147s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
147s Setting up zstd (1.5.7+dfsg-1) ...
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147s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so to provide /usr/lib/s390x-linux-gnu/libblas.so (libblas.so-s390x-linux-gnu) in auto mode
147s Setting up dctrl-tools (2.24-3build3) ...
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147s Setting up libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ...
147s Setting up liblapack3:s390x (3.12.1-2) ...
147s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
147s Setting up libpcre2-dev:s390x (10.45-1) ...
147s Setting up libtirpc3t64:s390x (1.3.6+ds-1) ...
147s Setting up fontconfig-config (2.15.0-2.2ubuntu1) ...
148s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ...
148s Setting up libpng-dev:s390x (1.6.47-1.1) ...
148s Setting up libpaper-utils (2.2.5-0.3) ...
148s Setting up libbibtex-parser-perl (1.05+dfsg-1) ...
148s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ...
148s Setting up pkgconf:s390x (1.8.1-4) ...
148s Setting up libthai0:s390x (0.1.29-2build1) ...
148s Setting up libtirpc-dev:s390x (1.3.6+ds-1) ...
148s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ...
148s Setting up libptexenc1:s390x (2024.20240313.70630+ds-6) ...
148s Setting up pandoc (3.1.11.1+ds-2) ...
148s Setting up liblapack-dev:s390x (3.12.1-2) ...
148s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode
148s Setting up cpp-14-s390x-linux-gnu (14.2.0-22ubuntu1) ...
148s Setting up cpp-14 (14.2.0-22ubuntu1) ...
148s Setting up libtiff6:s390x (4.7.0-3ubuntu1) ...
148s Setting up libfontconfig1:s390x (2.15.0-2.2ubuntu1) ...
148s Setting up libgcc-14-dev:s390x (14.2.0-22ubuntu1) ...
148s Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ...
148s Setting up libstdc++-14-dev:s390x (14.2.0-22ubuntu1) ...
148s Setting up libsm6:s390x (2:1.2.6-1) ...
148s Setting up libgfortran-14-dev:s390x (14.2.0-22ubuntu1) ...
148s Setting up fontconfig (2.15.0-2.2ubuntu1) ...
150s Regenerating fonts cache... done.
150s Setting up libxft2:s390x (2.3.6-1build1) ...
150s Setting up cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
150s Setting up libtk8.6:s390x (8.6.16-1) ...
150s Setting up libpango-1.0-0:s390x (1.56.3-1) ...
150s Setting up libjpeg-dev:s390x (8c-2ubuntu11) ...
150s Setting up libcairo2:s390x (1.18.4-1) ...
150s Setting up gcc-14-s390x-linux-gnu (14.2.0-22ubuntu1) ...
150s Setting up gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
150s Setting up libxt6t64:s390x (1:1.2.1-1.2build1) ...
150s Setting up g++-14-s390x-linux-gnu (14.2.0-22ubuntu1) ...
150s Setting up cpp (4:14.2.0-1ubuntu1) ...
150s Setting up libpangoft2-1.0-0:s390x (1.56.3-1) ...
150s Setting up libpangocairo-1.0-0:s390x (1.56.3-1) ...
150s Setting up libxmu6:s390x (2:1.1.3-3build2) ...
150s Setting up gfortran-14-s390x-linux-gnu (14.2.0-22ubuntu1) ...
150s Setting up g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
150s Setting up libxaw7:s390x (2:1.0.16-1) ...
150s Setting up gcc-14 (14.2.0-22ubuntu1) ...
150s Setting up r-base-core (4.5.0-3) ...
150s Creating config file /etc/R/Renviron with new version
150s Setting up r-cran-crayon (1.5.3-1) ...
150s Setting up r-cran-sourcetools (0.1.7-1-1) ...
150s Setting up texlive-binaries (2024.20240313.70630+ds-6) ...
150s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
150s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
150s Setting up r-cran-commonmark (1.9.5-1) ...
150s Setting up g++-14 (14.2.0-22ubuntu1) ...
150s Setting up r-cran-r6 (2.6.1-1) ...
150s Setting up r-cran-pkgkitten (0.2.4-1) ...
150s Setting up gfortran-14 (14.2.0-22ubuntu1) ...
150s Setting up texlive-base (2024.20250309-1) ...
150s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
150s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
150s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
151s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex
151s Setting up r-cran-magrittr (2.0.3-1) ...
151s Setting up r-cran-rappdirs (0.3.3-1) ...
151s Setting up r-bioc-genomeinfodbdata (1.2.13-2) ...
151s Setting up r-cran-littler (0.3.21-1) ...
151s Setting up r-cran-fs (1.6.5+dfsg-1) ...
151s Setting up r-cran-rcpp (1.0.14-1) ...
151s Setting up r-cran-curl (6.2.1+dfsg-1ubuntu1) ...
151s Setting up r-bioc-biocgenerics (0.52.0-2) ...
151s Setting up r-cran-rlang (1.1.5-3) ...
151s Setting up littler (0.3.21-1) ...
151s Setting up gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
151s Setting up r-cran-xfun (0.51+dfsg-1) ...
151s Setting up r-cran-sys (3.4.3-1) ...
151s Setting up r-cran-withr (3.0.2+dfsg-1) ...
151s Setting up r-cran-mime (0.12-2) ...
151s Setting up r-cran-base64enc (0.1-3-3) ...
151s Setting up r-cran-digest (0.6.37-1) ...
151s Setting up r-cran-yaml (2.3.10-1) ...
151s Setting up r-cran-evaluate (1.0.3-1) ...
151s Setting up r-cran-highr (0.11+dfsg-1) ...
151s Setting up r-cran-glue (1.8.0-1) ...
151s Setting up r-cran-xtable (1:1.8-4-2) ...
151s Setting up r-cran-cli (3.6.4-1) ...
151s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
151s Setting up r-bioc-biocversion (3.20.0-2) ...
151s Setting up r-cran-biocmanager (1.30.25+dfsg-1) ...
151s Setting up gcc (4:14.2.0-1ubuntu1) ...
151s Setting up r-bioc-zlibbioc (1.52.0+dfsg-2) ...
151s Setting up r-cran-askpass (1.2.1-1) ...
151s Setting up r-cran-fastmap (1.2.0-1) ...
151s Setting up r-cran-png (0.1-8-1build2) ...
151s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ...
151s Setting up texlive-latex-base (2024.20250309-1) ...
151s Setting up r-cran-markdown (1.13-1) ...
151s Setting up r-bioc-s4vectors (0.44.0+dfsg-2) ...
151s Setting up r-cran-runit (0.4.33-1) ...
151s Setting up r-cran-later (1.4.1+dfsg-1) ...
151s Setting up r-cran-htmltools (0.5.8.1-1) ...
151s Setting up r-cran-tinytex (0.56-1) ...
151s Setting up r-cran-knitr (1.50+dfsg-1) ...
151s Setting up g++ (4:14.2.0-1ubuntu1) ...
151s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
151s Setting up r-cran-cachem (1.1.0-1) ...
151s Setting up r-cran-sass (0.4.9+dfsg-1) ...
151s Setting up build-essential (12.12ubuntu1) ...
151s Setting up r-bioc-iranges (2.40.1-3) ...
151s Setting up r-cran-openssl (2.3.2+dfsg-1) ...
151s Setting up r-cran-fontawesome (0.5.3-1) ...
151s Setting up gfortran (4:14.2.0-1ubuntu1) ...
151s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
151s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
151s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
151s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
151s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ...
151s Setting up texlive-bibtex-extra (2024.20250309-2) ...
151s Setting up r-cran-httr (1.4.7+dfsg-1) ...
151s Setting up r-cran-memoise (2.0.1-1) ...
151s Setting up r-cran-promises (1.3.2+dfsg-1) ...
151s Setting up r-bioc-xvector (0.46.0-2) ...
151s Setting up r-base-dev (4.5.0-3) ...
151s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ...
151s Setting up r-cran-httpuv (1.6.15+dfsg-1) ...
151s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ...
151s Setting up r-cran-bslib (0.9.0+dfsg-3) ...
151s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
151s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ...
151s Setting up r-cran-shiny (1.10.0+dfsg-2) ...
151s Setting up r-cran-rmarkdown (2.29+dfsg-1) ...
151s Setting up r-cran-bookdown (0.42+dfsg-1) ...
151s Setting up r-bioc-keggrest (1.46.0+dfsg-3) ...
151s Setting up r-bioc-biocstyle (2.34.0+dfsg-1) ...
151s Processing triggers for libc-bin (2.41-6ubuntu1) ...
151s Processing triggers for man-db (2.13.0-1) ...
153s Processing triggers for install-info (7.1.1-1) ...
153s Processing triggers for tex-common (6.19) ...
154s Running updmap-sys. This may take some time... done.
154s Running mktexlsr /var/lib/texmf ... done.
154s Building format(s) --all.
208s 	This may take some time... done.
209s autopkgtest [21:03:22]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
209s autopkgtest [21:03:22]: test pkg-r-autopkgtest: [-----------------------
209s Test: Try to load the R library KEGGREST
209s 
209s R version 4.5.0 (2025-04-11) -- "How About a Twenty-Six"
209s Copyright (C) 2025 The R Foundation for Statistical Computing
209s Platform: s390x-ibm-linux-gnu
209s 
209s R is free software and comes with ABSOLUTELY NO WARRANTY.
209s You are welcome to redistribute it under certain conditions.
209s Type 'license()' or 'licence()' for distribution details.
209s 
209s R is a collaborative project with many contributors.
209s Type 'contributors()' for more information and
209s 'citation()' on how to cite R or R packages in publications.
209s 
209s Type 'demo()' for some demos, 'help()' for on-line help, or
209s 'help.start()' for an HTML browser interface to help.
209s Type 'q()' to quit R.
209s 
209s > library('KEGGREST')
212s > 
212s Other tests are currently unsupported!
212s They will be progressively added.
213s autopkgtest [21:03:26]: test pkg-r-autopkgtest: -----------------------]
213s pkg-r-autopkgtest    PASS
213s autopkgtest [21:03:26]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
213s autopkgtest [21:03:26]: @@@@@@@@@@@@@@@@@@@@ summary
213s pkg-r-autopkgtest    PASS
230s nova [W] Using flock in prodstack6-s390x
230s Creating nova instance adt-questing-s390x-r-bioc-keggrest-20250502-205953-juju-7f2275-prod-proposed-migration-environment-20-7e900ace-6ec6-4329-b006-b420ce22a626 from image adt/ubuntu-questing-s390x-server-20250502.img (UUID 632ecfca-a19d-4f3a-af48-b7883fa0ccf2)...
230s nova [W] Timed out waiting for 3036dc0d-c4f7-4517-9145-344009520529 to get deleted.