0s autopkgtest [03:40:23]: starting date and time: 2025-07-12 03:40:23+0000 0s autopkgtest [03:40:23]: git checkout: 508d4a25 a-v-ssh wait_for_ssh: demote "ssh connection failed" to a debug message 0s autopkgtest [03:40:23]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.33fl4_0h/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python-reportlab --apt-upgrade python-biopython --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python-reportlab/4.4.2-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@sto01-s390x-13.secgroup --name adt-questing-s390x-python-biopython-20250712-034022-juju-7f2275-prod-proposed-migration-environment-15-60340907-7323-422b-8cba-37c7767fbf63 --image adt/ubuntu-questing-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-autopkgtest-workers-s390x -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 2s Creating nova instance adt-questing-s390x-python-biopython-20250712-034022-juju-7f2275-prod-proposed-migration-environment-15-60340907-7323-422b-8cba-37c7767fbf63 from image adt/ubuntu-questing-s390x-server-20250712.img (UUID 7b6092a6-dbc8-44b8-9db1-c057a8910204)... 54s autopkgtest [03:41:17]: testbed dpkg architecture: s390x 54s autopkgtest [03:41:17]: testbed apt version: 3.1.3 55s autopkgtest [03:41:18]: @@@@@@@@@@@@@@@@@@@@ test bed setup 55s autopkgtest [03:41:18]: testbed release detected to be: None 55s autopkgtest [03:41:18]: updating testbed package index (apt update) 56s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [249 kB] 56s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 56s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 56s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 56s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [39.9 kB] 56s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [15.4 kB] 56s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [207 kB] 56s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main s390x Packages [56.3 kB] 56s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x Packages [176 kB] 56s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse s390x Packages [4452 B] 56s Fetched 749 kB in 0s (1729 kB/s) 57s Reading package lists... 57s autopkgtest [03:41:20]: upgrading testbed (apt dist-upgrade and autopurge) 57s Reading package lists... 57s Building dependency tree... 57s Reading state information... 58s Calculating upgrade... 58s The following packages will be upgraded: 58s htop 58s 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 58s Need to get 189 kB of archives. 58s After this operation, 0 B of additional disk space will be used. 58s Get:1 http://ftpmaster.internal/ubuntu questing/main s390x htop s390x 3.4.1-5 [189 kB] 58s Fetched 189 kB in 0s (10.2 MB/s) 58s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 86057 files and directories currently installed.) 58s Preparing to unpack .../htop_3.4.1-5_s390x.deb ... 58s Unpacking htop (3.4.1-5) over (3.4.1-4) ... 58s Setting up htop (3.4.1-5) ... 58s Processing triggers for man-db (2.13.1-1) ... 59s Reading package lists... 59s Building dependency tree... 59s Reading state information... 59s Solving dependencies... 59s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 61s autopkgtest [03:41:24]: testbed running kernel: Linux 6.15.0-4-generic #4-Ubuntu SMP Fri Jul 4 13:27:29 UTC 2025 61s autopkgtest [03:41:24]: @@@@@@@@@@@@@@@@@@@@ apt-source python-biopython 64s Get:1 http://ftpmaster.internal/ubuntu questing/universe python-biopython 1.85+dfsg-4 (dsc) [3070 B] 64s Get:2 http://ftpmaster.internal/ubuntu questing/universe python-biopython 1.85+dfsg-4 (tar) [14.6 MB] 64s Get:3 http://ftpmaster.internal/ubuntu questing/universe python-biopython 1.85+dfsg-4 (diff) [42.8 kB] 64s gpgv: Signature made Fri Apr 11 19:33:28 2025 UTC 64s gpgv: using RSA key D54C3BFAFFB042DE382DA5D741CE7F0B9F1B8B32 64s gpgv: Can't check signature: No public key 64s dpkg-source: warning: cannot verify inline signature for ./python-biopython_1.85+dfsg-4.dsc: no acceptable signature found 65s autopkgtest [03:41:28]: testing package python-biopython version 1.85+dfsg-4 66s autopkgtest [03:41:29]: build not needed 72s autopkgtest [03:41:35]: test dependencies: preparing testbed 72s Reading package lists... 72s Building dependency tree... 72s Reading state information... 72s Solving dependencies... 72s The following NEW packages will be installed: 72s fontconfig-config fonts-urw-base35 libblas3 libcairo2 libdeflate0 72s libfontconfig1 libfontenc1 libfreetype6 libgfortran5 libgomp1 libgraphite2-3 72s libharfbuzz0b libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery 72s libjs-sphinxdoc libjs-underscore liblapack3 liblcms2-2 libopenjp2-7 72s libpixman-1-0 libraqm0 libsharpyuv0 libtiff6 libwebp7 libwebpdemux2 72s libwebpmux3 libxcb-render0 libxcb-shm0 libxrender1 python-biopython-doc 72s python3-all python3-biopython python3-biopython-sql python3-cairo 72s python3-charset-normalizer python3-freetype python3-numpy python3-numpy-dev 72s python3-pil python3-reportlab python3-rlpycairo sgml-base w3c-sgml-lib 72s x11-common xfonts-encodings xfonts-utils xml-core 72s 0 upgraded, 50 newly installed, 0 to remove and 0 not upgraded. 72s Need to get 46.2 MB of archives. 72s After this operation, 125 MB of additional disk space will be used. 72s Get:1 http://ftpmaster.internal/ubuntu questing/main s390x python3-numpy-dev s390x 1:2.2.4+ds-1ubuntu1 [147 kB] 72s Get:2 http://ftpmaster.internal/ubuntu questing/main s390x libblas3 s390x 3.12.1-2build1 [252 kB] 72s Get:3 http://ftpmaster.internal/ubuntu questing/main s390x libgfortran5 s390x 15.1.0-8ubuntu1 [620 kB] 72s Get:4 http://ftpmaster.internal/ubuntu questing/main s390x liblapack3 s390x 3.12.1-2build1 [2970 kB] 72s Get:5 http://ftpmaster.internal/ubuntu questing/main s390x python3-numpy s390x 1:2.2.4+ds-1ubuntu1 [4399 kB] 72s Get:6 http://ftpmaster.internal/ubuntu questing/main s390x libfontenc1 s390x 1:1.1.8-1build1 [14.8 kB] 72s Get:7 http://ftpmaster.internal/ubuntu questing/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB] 72s Get:8 http://ftpmaster.internal/ubuntu questing/main s390x x11-common all 1:7.7+24ubuntu1 [22.4 kB] 72s Get:9 http://ftpmaster.internal/ubuntu questing/main s390x xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] 72s Get:10 http://ftpmaster.internal/ubuntu questing/main s390x xfonts-utils s390x 1:7.7+7 [101 kB] 73s Get:11 http://ftpmaster.internal/ubuntu questing/main s390x fonts-urw-base35 all 20200910-8 [11.0 MB] 73s Get:12 http://ftpmaster.internal/ubuntu questing/main s390x fontconfig-config s390x 2.15.0-2.3ubuntu1 [38.1 kB] 73s Get:13 http://ftpmaster.internal/ubuntu questing/main s390x libfontconfig1 s390x 2.15.0-2.3ubuntu1 [149 kB] 73s Get:14 http://ftpmaster.internal/ubuntu questing/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB] 73s Get:15 http://ftpmaster.internal/ubuntu questing/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB] 73s Get:16 http://ftpmaster.internal/ubuntu questing/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B] 73s Get:17 http://ftpmaster.internal/ubuntu questing/main s390x libxrender1 s390x 1:0.9.12-1 [20.9 kB] 73s Get:18 http://ftpmaster.internal/ubuntu questing/main s390x libcairo2 s390x 1.18.4-1 [580 kB] 73s Get:19 http://ftpmaster.internal/ubuntu questing/main s390x libdeflate0 s390x 1.23-2 [46.0 kB] 73s Get:20 http://ftpmaster.internal/ubuntu questing/main s390x libgomp1 s390x 15.1.0-8ubuntu1 [154 kB] 73s Get:21 http://ftpmaster.internal/ubuntu questing/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB] 73s Get:22 http://ftpmaster.internal/ubuntu questing/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB] 73s Get:23 http://ftpmaster.internal/ubuntu questing/main s390x libimagequant0 s390x 2.18.0-1build1 [43.3 kB] 73s Get:24 http://ftpmaster.internal/ubuntu questing/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB] 73s Get:25 http://ftpmaster.internal/ubuntu questing/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 73s Get:26 http://ftpmaster.internal/ubuntu questing/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 73s Get:27 http://ftpmaster.internal/ubuntu questing/main s390x libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 73s Get:28 http://ftpmaster.internal/ubuntu questing/main s390x libjs-sphinxdoc all 8.2.3-1ubuntu2 [28.0 kB] 73s Get:29 http://ftpmaster.internal/ubuntu questing/main s390x liblcms2-2 s390x 2.16-2 [175 kB] 73s Get:30 http://ftpmaster.internal/ubuntu questing/main s390x libraqm0 s390x 0.10.2-1 [15.8 kB] 73s Get:31 http://ftpmaster.internal/ubuntu questing/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB] 73s Get:32 http://ftpmaster.internal/ubuntu questing/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB] 73s Get:33 http://ftpmaster.internal/ubuntu questing/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB] 73s Get:34 http://ftpmaster.internal/ubuntu questing/main s390x libtiff6 s390x 4.7.0-3ubuntu1 [219 kB] 73s Get:35 http://ftpmaster.internal/ubuntu questing/main s390x libwebpdemux2 s390x 1.5.0-0.1 [12.6 kB] 73s Get:36 http://ftpmaster.internal/ubuntu questing/main s390x libwebpmux3 s390x 1.5.0-0.1 [25.8 kB] 73s Get:37 http://ftpmaster.internal/ubuntu questing/universe s390x python-biopython-doc all 1.85+dfsg-4 [18.2 MB] 73s Get:38 http://ftpmaster.internal/ubuntu questing/main s390x python3-all s390x 3.13.5-1 [884 B] 73s Get:39 http://ftpmaster.internal/ubuntu questing/universe s390x python3-charset-normalizer s390x 3.4.2-1 [129 kB] 73s Get:40 http://ftpmaster.internal/ubuntu questing/main s390x libopenjp2-7 s390x 2.5.3-2 [207 kB] 73s Get:41 http://ftpmaster.internal/ubuntu questing/main s390x python3-pil s390x 11.1.0-5build1 [498 kB] 73s Get:42 http://ftpmaster.internal/ubuntu questing/main s390x python3-cairo s390x 1.27.0-2 [120 kB] 73s Get:43 http://ftpmaster.internal/ubuntu questing/universe s390x python3-freetype all 2.5.1-1 [92.3 kB] 73s Get:44 http://ftpmaster.internal/ubuntu questing/universe s390x python3-rlpycairo all 0.3.0-3 [9130 B] 73s Get:45 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x python3-reportlab all 4.4.2-1 [1145 kB] 73s Get:46 http://ftpmaster.internal/ubuntu questing/main s390x sgml-base all 1.31+nmu1 [11.0 kB] 73s Get:47 http://ftpmaster.internal/ubuntu questing/main s390x xml-core all 0.19 [20.3 kB] 73s Get:48 http://ftpmaster.internal/ubuntu questing/universe s390x w3c-sgml-lib all 1.3-3 [280 kB] 73s Get:49 http://ftpmaster.internal/ubuntu questing/universe s390x python3-biopython s390x 1.85+dfsg-4 [1745 kB] 73s Get:50 http://ftpmaster.internal/ubuntu questing/universe s390x python3-biopython-sql all 1.85+dfsg-4 [26.4 kB] 74s Fetched 46.2 MB in 1s (40.5 MB/s) 74s Selecting previously unselected package python3-numpy-dev:s390x. 74s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 86057 files and directories currently installed.) 74s Preparing to unpack .../00-python3-numpy-dev_1%3a2.2.4+ds-1ubuntu1_s390x.deb ... 74s Unpacking python3-numpy-dev:s390x (1:2.2.4+ds-1ubuntu1) ... 74s Selecting previously unselected package libblas3:s390x. 74s Preparing to unpack .../01-libblas3_3.12.1-2build1_s390x.deb ... 74s Unpacking libblas3:s390x (3.12.1-2build1) ... 74s Selecting previously unselected package libgfortran5:s390x. 74s Preparing to unpack .../02-libgfortran5_15.1.0-8ubuntu1_s390x.deb ... 74s Unpacking libgfortran5:s390x (15.1.0-8ubuntu1) ... 74s Selecting previously unselected package liblapack3:s390x. 74s Preparing to unpack .../03-liblapack3_3.12.1-2build1_s390x.deb ... 74s Unpacking liblapack3:s390x (3.12.1-2build1) ... 74s Selecting previously unselected package python3-numpy. 74s Preparing to unpack .../04-python3-numpy_1%3a2.2.4+ds-1ubuntu1_s390x.deb ... 74s Unpacking python3-numpy (1:2.2.4+ds-1ubuntu1) ... 74s Selecting previously unselected package libfontenc1:s390x. 74s Preparing to unpack .../05-libfontenc1_1%3a1.1.8-1build1_s390x.deb ... 74s Unpacking libfontenc1:s390x (1:1.1.8-1build1) ... 74s Selecting previously unselected package libfreetype6:s390x. 74s Preparing to unpack .../06-libfreetype6_2.13.3+dfsg-1_s390x.deb ... 74s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ... 74s Selecting previously unselected package x11-common. 74s Preparing to unpack .../07-x11-common_1%3a7.7+24ubuntu1_all.deb ... 74s Unpacking x11-common (1:7.7+24ubuntu1) ... 74s Selecting previously unselected package xfonts-encodings. 74s Preparing to unpack .../08-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ... 74s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ... 74s Selecting previously unselected package xfonts-utils. 74s Preparing to unpack .../09-xfonts-utils_1%3a7.7+7_s390x.deb ... 74s Unpacking xfonts-utils (1:7.7+7) ... 74s Selecting previously unselected package fonts-urw-base35. 74s Preparing to unpack .../10-fonts-urw-base35_20200910-8_all.deb ... 74s Unpacking fonts-urw-base35 (20200910-8) ... 74s Selecting previously unselected package fontconfig-config. 74s Preparing to unpack .../11-fontconfig-config_2.15.0-2.3ubuntu1_s390x.deb ... 74s Unpacking fontconfig-config (2.15.0-2.3ubuntu1) ... 74s Selecting previously unselected package libfontconfig1:s390x. 74s Preparing to unpack .../12-libfontconfig1_2.15.0-2.3ubuntu1_s390x.deb ... 74s Unpacking libfontconfig1:s390x (2.15.0-2.3ubuntu1) ... 74s Selecting previously unselected package libpixman-1-0:s390x. 74s Preparing to unpack .../13-libpixman-1-0_0.44.0-3_s390x.deb ... 74s Unpacking libpixman-1-0:s390x (0.44.0-3) ... 74s Selecting previously unselected package libxcb-render0:s390x. 74s Preparing to unpack .../14-libxcb-render0_1.17.0-2_s390x.deb ... 74s Unpacking libxcb-render0:s390x (1.17.0-2) ... 74s Selecting previously unselected package libxcb-shm0:s390x. 74s Preparing to unpack .../15-libxcb-shm0_1.17.0-2_s390x.deb ... 74s Unpacking libxcb-shm0:s390x (1.17.0-2) ... 74s Selecting previously unselected package libxrender1:s390x. 74s Preparing to unpack .../16-libxrender1_1%3a0.9.12-1_s390x.deb ... 74s Unpacking libxrender1:s390x (1:0.9.12-1) ... 74s Selecting previously unselected package libcairo2:s390x. 74s Preparing to unpack .../17-libcairo2_1.18.4-1_s390x.deb ... 74s Unpacking libcairo2:s390x (1.18.4-1) ... 74s Selecting previously unselected package libdeflate0:s390x. 74s Preparing to unpack .../18-libdeflate0_1.23-2_s390x.deb ... 74s Unpacking libdeflate0:s390x (1.23-2) ... 74s Selecting previously unselected package libgomp1:s390x. 74s Preparing to unpack .../19-libgomp1_15.1.0-8ubuntu1_s390x.deb ... 74s Unpacking libgomp1:s390x (15.1.0-8ubuntu1) ... 74s Selecting previously unselected package libgraphite2-3:s390x. 74s Preparing to unpack .../20-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ... 74s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 74s Selecting previously unselected package libharfbuzz0b:s390x. 74s Preparing to unpack .../21-libharfbuzz0b_10.2.0-1_s390x.deb ... 74s Unpacking libharfbuzz0b:s390x (10.2.0-1) ... 74s Selecting previously unselected package libimagequant0:s390x. 74s Preparing to unpack .../22-libimagequant0_2.18.0-1build1_s390x.deb ... 74s Unpacking libimagequant0:s390x (2.18.0-1build1) ... 74s Selecting previously unselected package libjpeg-turbo8:s390x. 74s Preparing to unpack .../23-libjpeg-turbo8_2.1.5-3ubuntu2_s390x.deb ... 74s Unpacking libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ... 75s Selecting previously unselected package libjpeg8:s390x. 75s Preparing to unpack .../24-libjpeg8_8c-2ubuntu11_s390x.deb ... 75s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 75s Selecting previously unselected package libjs-jquery. 75s Preparing to unpack .../25-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 75s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 75s Selecting previously unselected package libjs-underscore. 75s Preparing to unpack .../26-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 75s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 75s Selecting previously unselected package libjs-sphinxdoc. 75s Preparing to unpack .../27-libjs-sphinxdoc_8.2.3-1ubuntu2_all.deb ... 75s Unpacking libjs-sphinxdoc (8.2.3-1ubuntu2) ... 75s Selecting previously unselected package liblcms2-2:s390x. 75s Preparing to unpack .../28-liblcms2-2_2.16-2_s390x.deb ... 75s Unpacking liblcms2-2:s390x (2.16-2) ... 75s Selecting previously unselected package libraqm0:s390x. 75s Preparing to unpack .../29-libraqm0_0.10.2-1_s390x.deb ... 75s Unpacking libraqm0:s390x (0.10.2-1) ... 75s Selecting previously unselected package libsharpyuv0:s390x. 75s Preparing to unpack .../30-libsharpyuv0_1.5.0-0.1_s390x.deb ... 75s Unpacking libsharpyuv0:s390x (1.5.0-0.1) ... 75s Selecting previously unselected package libjbig0:s390x. 75s Preparing to unpack .../31-libjbig0_2.1-6.1ubuntu2_s390x.deb ... 75s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ... 75s Selecting previously unselected package libwebp7:s390x. 75s Preparing to unpack .../32-libwebp7_1.5.0-0.1_s390x.deb ... 75s Unpacking libwebp7:s390x (1.5.0-0.1) ... 75s Selecting previously unselected package libtiff6:s390x. 75s Preparing to unpack .../33-libtiff6_4.7.0-3ubuntu1_s390x.deb ... 75s Unpacking libtiff6:s390x (4.7.0-3ubuntu1) ... 75s Selecting previously unselected package libwebpdemux2:s390x. 75s Preparing to unpack .../34-libwebpdemux2_1.5.0-0.1_s390x.deb ... 75s Unpacking libwebpdemux2:s390x (1.5.0-0.1) ... 75s Selecting previously unselected package libwebpmux3:s390x. 75s Preparing to unpack .../35-libwebpmux3_1.5.0-0.1_s390x.deb ... 75s Unpacking libwebpmux3:s390x (1.5.0-0.1) ... 75s Selecting previously unselected package python-biopython-doc. 75s Preparing to unpack .../36-python-biopython-doc_1.85+dfsg-4_all.deb ... 75s Unpacking python-biopython-doc (1.85+dfsg-4) ... 75s Selecting previously unselected package python3-all. 75s Preparing to unpack .../37-python3-all_3.13.5-1_s390x.deb ... 75s Unpacking python3-all (3.13.5-1) ... 75s Selecting previously unselected package python3-charset-normalizer. 75s Preparing to unpack .../38-python3-charset-normalizer_3.4.2-1_s390x.deb ... 75s Unpacking python3-charset-normalizer (3.4.2-1) ... 75s Selecting previously unselected package libopenjp2-7:s390x. 75s Preparing to unpack .../39-libopenjp2-7_2.5.3-2_s390x.deb ... 75s Unpacking libopenjp2-7:s390x (2.5.3-2) ... 75s Selecting previously unselected package python3-pil:s390x. 75s Preparing to unpack .../40-python3-pil_11.1.0-5build1_s390x.deb ... 75s Unpacking python3-pil:s390x (11.1.0-5build1) ... 75s Selecting previously unselected package python3-cairo. 75s Preparing to unpack .../41-python3-cairo_1.27.0-2_s390x.deb ... 75s Unpacking python3-cairo (1.27.0-2) ... 75s Selecting previously unselected package python3-freetype. 75s Preparing to unpack .../42-python3-freetype_2.5.1-1_all.deb ... 75s Unpacking python3-freetype (2.5.1-1) ... 75s Selecting previously unselected package python3-rlpycairo. 75s Preparing to unpack .../43-python3-rlpycairo_0.3.0-3_all.deb ... 75s Unpacking python3-rlpycairo (0.3.0-3) ... 75s Selecting previously unselected package python3-reportlab. 75s Preparing to unpack .../44-python3-reportlab_4.4.2-1_all.deb ... 75s Unpacking python3-reportlab (4.4.2-1) ... 75s Selecting previously unselected package sgml-base. 75s Preparing to unpack .../45-sgml-base_1.31+nmu1_all.deb ... 75s Unpacking sgml-base (1.31+nmu1) ... 75s Selecting previously unselected package xml-core. 75s Preparing to unpack .../46-xml-core_0.19_all.deb ... 75s Unpacking xml-core (0.19) ... 75s Selecting previously unselected package w3c-sgml-lib. 75s Preparing to unpack .../47-w3c-sgml-lib_1.3-3_all.deb ... 75s Unpacking w3c-sgml-lib (1.3-3) ... 75s Selecting previously unselected package python3-biopython. 75s Preparing to unpack .../48-python3-biopython_1.85+dfsg-4_s390x.deb ... 75s Unpacking python3-biopython (1.85+dfsg-4) ... 75s Selecting previously unselected package python3-biopython-sql. 75s Preparing to unpack .../49-python3-biopython-sql_1.85+dfsg-4_all.deb ... 75s Unpacking python3-biopython-sql (1.85+dfsg-4) ... 75s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 75s Setting up liblcms2-2:s390x (2.16-2) ... 75s Setting up libpixman-1-0:s390x (0.44.0-3) ... 75s Setting up libsharpyuv0:s390x (1.5.0-0.1) ... 75s Setting up libxrender1:s390x (1:0.9.12-1) ... 75s Setting up libxcb-render0:s390x (1.17.0-2) ... 75s Setting up python3-charset-normalizer (3.4.2-1) ... 75s Setting up x11-common (1:7.7+24ubuntu1) ... 76s Setting up libdeflate0:s390x (1.23-2) ... 76s Setting up python3-all (3.13.5-1) ... 76s Setting up libxcb-shm0:s390x (1.17.0-2) ... 76s Setting up libgomp1:s390x (15.1.0-8ubuntu1) ... 76s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ... 76s Setting up libfontenc1:s390x (1:1.1.8-1build1) ... 76s Setting up libblas3:s390x (3.12.1-2build1) ... 76s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 76s Setting up libfreetype6:s390x (2.13.3+dfsg-1) ... 76s Setting up xfonts-encodings (1:1.0.5-0ubuntu2) ... 76s Setting up libimagequant0:s390x (2.18.0-1build1) ... 76s Setting up python3-numpy-dev:s390x (1:2.2.4+ds-1ubuntu1) ... 76s Setting up libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ... 76s Setting up libgfortran5:s390x (15.1.0-8ubuntu1) ... 76s Setting up libwebp7:s390x (1.5.0-0.1) ... 76s Setting up libopenjp2-7:s390x (2.5.3-2) ... 76s Setting up libharfbuzz0b:s390x (10.2.0-1) ... 76s Setting up sgml-base (1.31+nmu1) ... 76s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 76s Setting up libwebpmux3:s390x (1.5.0-0.1) ... 76s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 76s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 76s Setting up liblapack3:s390x (3.12.1-2build1) ... 76s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 76s Setting up libwebpdemux2:s390x (1.5.0-0.1) ... 76s Setting up python3-freetype (2.5.1-1) ... 76s Setting up xfonts-utils (1:7.7+7) ... 76s Setting up libraqm0:s390x (0.10.2-1) ... 76s Setting up python3-numpy (1:2.2.4+ds-1ubuntu1) ... 77s Setting up libjs-sphinxdoc (8.2.3-1ubuntu2) ... 77s Setting up python-biopython-doc (1.85+dfsg-4) ... 77s Setting up libtiff6:s390x (4.7.0-3ubuntu1) ... 77s Setting up xml-core (0.19) ... 77s Setting up fonts-urw-base35 (20200910-8) ... 78s Setting up python3-pil:s390x (11.1.0-5build1) ... 78s Setting up fontconfig-config (2.15.0-2.3ubuntu1) ... 78s Setting up libfontconfig1:s390x (2.15.0-2.3ubuntu1) ... 78s Setting up libcairo2:s390x (1.18.4-1) ... 78s Setting up python3-cairo (1.27.0-2) ... 78s Setting up python3-rlpycairo (0.3.0-3) ... 78s Setting up python3-reportlab (4.4.2-1) ... 79s Processing triggers for libc-bin (2.41-6ubuntu2) ... 79s Processing triggers for man-db (2.13.1-1) ... 79s Processing triggers for sgml-base (1.31+nmu1) ... 79s Setting up w3c-sgml-lib (1.3-3) ... 102s Setting up python3-biopython (1.85+dfsg-4) ... 103s Setting up python3-biopython-sql (1.85+dfsg-4) ... 104s autopkgtest [03:42:07]: test dependencies: sh debian/tests/run-unit-test 104s autopkgtest [03:42:07]: test dependencies: [----------------------- 105s cp: cannot stat '/usr/share/libcifpp/mmcif_pdbx.dic': No such file or directory 105s cp: cannot stat '/usr/share/libcifpp/mmcif_ma.dic': No such file or directory 105s mkdir: created directory 'Bio' 105s mkdir: created directory 'Bio/Align' 105s mkdir: created directory 'Bio/Align/substitution_matrices' 105s mkdir: created directory 'Bio/Align/substitution_matrices/data/' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/BENNER22' -> 'Bio/Align/substitution_matrices/data/BENNER22' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/BENNER6' -> 'Bio/Align/substitution_matrices/data/BENNER6' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/BENNER74' -> 'Bio/Align/substitution_matrices/data/BENNER74' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/BLASTN' -> 'Bio/Align/substitution_matrices/data/BLASTN' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/BLASTP' -> 'Bio/Align/substitution_matrices/data/BLASTP' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/BLOSUM45' -> 'Bio/Align/substitution_matrices/data/BLOSUM45' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/BLOSUM50' -> 'Bio/Align/substitution_matrices/data/BLOSUM50' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/BLOSUM62' -> 'Bio/Align/substitution_matrices/data/BLOSUM62' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/BLOSUM80' -> 'Bio/Align/substitution_matrices/data/BLOSUM80' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/BLOSUM90' -> 'Bio/Align/substitution_matrices/data/BLOSUM90' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/DAYHOFF' -> 'Bio/Align/substitution_matrices/data/DAYHOFF' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/FENG' -> 'Bio/Align/substitution_matrices/data/FENG' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/GENETIC' -> 'Bio/Align/substitution_matrices/data/GENETIC' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/GONNET1992' -> 'Bio/Align/substitution_matrices/data/GONNET1992' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/HOXD70' -> 'Bio/Align/substitution_matrices/data/HOXD70' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/JOHNSON' -> 'Bio/Align/substitution_matrices/data/JOHNSON' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/JONES' -> 'Bio/Align/substitution_matrices/data/JONES' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/LEVIN' -> 'Bio/Align/substitution_matrices/data/LEVIN' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/MCLACHLAN' -> 'Bio/Align/substitution_matrices/data/MCLACHLAN' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/MDM78' -> 'Bio/Align/substitution_matrices/data/MDM78' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/MEGABLAST' -> 'Bio/Align/substitution_matrices/data/MEGABLAST' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/NUC.4.4' -> 'Bio/Align/substitution_matrices/data/NUC.4.4' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/PAM250' -> 'Bio/Align/substitution_matrices/data/PAM250' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/PAM30' -> 'Bio/Align/substitution_matrices/data/PAM30' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/PAM70' -> 'Bio/Align/substitution_matrices/data/PAM70' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/RAO' -> 'Bio/Align/substitution_matrices/data/RAO' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/RISLER' -> 'Bio/Align/substitution_matrices/data/RISLER' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/SCHNEIDER' -> 'Bio/Align/substitution_matrices/data/SCHNEIDER' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/STR' -> 'Bio/Align/substitution_matrices/data/STR' 105s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/TRANS' -> 'Bio/Align/substitution_matrices/data/TRANS' 106s test_Ace ... ok 106s test_Affy ... ok 108s test_AlignIO ... ok 108s test_AlignIO_ClustalIO ... ok 108s test_AlignIO_EmbossIO ... ok 108s test_AlignIO_FastaIO ... ok 108s test_AlignIO_MauveIO ... ok 108s test_AlignIO_PhylipIO ... ok 108s test_AlignIO_convert ... ok 108s test_AlignInfo ... ok 108s test_Align_Alignment ... ok 108s test_Align_a2m ... ok 108s test_Align_bed ... ok 108s test_Align_bigbed ... ok 108s test_Align_bigmaf ... ok 109s test_Align_bigpsl ... ok 109s test_Align_chain ... ok 109s test_Align_clustal ... ok 113s test_Align_codonalign ... ok 113s test_Align_emboss ... ok 113s test_Align_exonerate ... ok 113s test_Align_fasta ... ok 113s test_Align_hhr ... ok 114s test_Align_maf ... ok 114s test_Align_mauve ... ok 114s test_Align_msf ... ok 114s test_Align_nexus ... ok 114s test_Align_phylip ... ok 114s test_Align_psl ... ok 114s test_Align_sam ... ok 115s test_Align_stockholm ... ok 116s test_Align_tabular ... ok 116s test_Application ... ok 116s test_BioSQL_MySQLdb_online ... skipping. internet not available 116s test_BioSQL_mysql_connector ... skipping. BioSQL test configuration file biosql.ini missing (see biosql.ini.sample) 116s test_BioSQL_mysql_connector_online ... skipping. internet not available 116s test_BioSQL_psycopg2_online ... skipping. internet not available 119s test_BioSQL_sqlite3 ... ok 119s test_BioSQL_sqlite3_online ... skipping. internet not available 119s test_Blast_Record ... ok 119s test_Blast_parser ... ok 119s test_CAPS ... ok 119s test_Chi2 ... ok 119s test_ClustalOmega_tool ... skipping. Install clustalo if you want to use Clustal Omega from Biopython. 119s test_Clustalw_tool ... skipping. Install clustalw or clustalw2 if you want to use it from Biopython. 119s test_Cluster ... ok 119s test_CodonTable ... ok 119s test_ColorSpiral ... ok 119s test_Compass ... ok 120s test_Consensus ... ok 120s test_Dialign_tool ... skipping. Install DIALIGN2-2 if you want to use the Bio.Align.Applications wrapper. 120s test_EMBL_unittest ... ok 120s test_Emboss ... skipping. $EMBOSS_ROOT='/usr/lib/emboss' which does not exist! 120s test_EmbossPrimer ... ok 124s test_Entrez ... ok 124s test_Entrez_online ... skipping. internet not available 125s test_Entrez_parser ... ok 125s test_Enzyme ... ok 125s test_ExPASy ... skipping. internet not available 125s test_Fasttree_tool ... skipping. Install FastTree and correctly set the file path to the program if you want to use it from Biopython. 125s test_File ... ok 125s test_GenBank ... /usr/lib/python3/dist-packages/Bio/SeqIO/InsdcIO.py:600: BiopythonWarning: Annotation 'Sequence Read Archive: SRX001885, SRX001121, SRX001531, SRX001530, SRX001529' too long 125s warnings.warn(f"Annotation {text!r} too long", BiopythonWarning) 125s ok 127s test_GenomeDiagram ... Warn: Can't find .pfb for face 'Helvetica' 128s ok 129s test_GraphicsChromosome ... ok 129s test_GraphicsDistribution ... ok 130s test_GraphicsGeneral ... ok 130s test_HMMCasino ... ok 130s test_HMMGeneral ... ok 130s test_KEGG ... ok 130s test_KEGG_online ... skipping. internet not available 134s test_KGML_graphics ... ok 134s test_KGML_graphics_online ... skipping. internet not available 135s test_KGML_nographics ... ok 135s test_KeyWList ... ok 135s test_LogisticRegression ... ok 135s test_MafIO_index ... ok 135s test_Mafft_tool ... skipping. Install MAFFT if you want to use the Bio.Align.Applications wrapper. 135s test_MarkovModel ... ok 135s test_Medline ... ok 135s test_Muscle_tool ... skipping. Install MUSCLE if you want to use the Bio.Align.Applications wrapper. 136s test_NCBIXML ... Exception ignored in: 136s Traceback (most recent call last): 136s File "/usr/lib/python3/dist-packages/Bio/Blast/NCBIXML.py", line 1319, in parse 136s expat_parser.Parse(NULL, True) 136s xml.parsers.expat.ExpatError: unclosed token: line 320, column 0 136s ok 136s test_NCBI_BLAST_tools ... skipping. Install the NCBI BLAST+ command line tools if you want to use the Bio.Blast.Applications wrapper. 136s test_NCBI_qblast ... ok 136s test_NMR ... ok 136s test_NaiveBayes ... ok 136s test_Nexus ... ok 136s test_PAML_baseml ... ok 137s test_PAML_codeml ... ok 137s test_PAML_yn00 ... ok 141s test_PDB_CEAligner ... ok 141s test_PDB_DSSP ... ok 141s test_PDB_Dice ... ok 141s test_PDB_Disordered ... ok 141s test_PDB_Exposure ... ok 142s test_PDB_FragmentMapper ... ok 143s test_PDB_KDTree ... ok 143s test_PDB_MMCIF2Dict ... ok 143s test_PDB_MMCIFIO ... ok 144s test_PDB_MMCIFParser ... ok 144s test_PDB_NACCESS ... ok 144s test_PDB_PDBIO ... ok 144s test_PDB_PDBList ... skipping. internet not available 150s test_PDB_PDBMLParser ... ok 150s test_PDB_PDBParser ... ok 150s test_PDB_PSEA ... skipping. Download and install psea from ftp://ftp.lmcp.jussieu.fr/pub/sincris/software/protein/p-sea/. Make sure that psea is on path 150s test_PDB_Polypeptide ... ok 150s test_PDB_QCPSuperimposer ... ok 153s test_PDB_SASA ... ok 154s test_PDB_SMCRA ... ok 154s test_PDB_Selection ... ok 154s test_PDB_StructureAlignment ... ok 154s test_PDB_Superimposer ... ok 154s test_PDB_alphafold_db ... skipping. internet not available 154s test_PDB_internal_coords ... skipping. Error: Install mmtf to use Bio.PDB.mmtf (e.g. pip install mmtf-python) 154s 154s test_PDB_parse_pdb_header ... ok 154s test_PDB_vectors ... ok 154s test_PQR ... ok 154s test_Pathway ... ok 154s test_Phd ... ok 154s test_Phylo ... ok 154s test_PhyloXML ... ok 154s test_Phylo_CDAO ... skipping. Install RDFlib if you want to use the CDAO tree format. 155s test_Phylo_NeXML ... ok 155s test_Phylo_igraph ... skipping. Install igraph if you wish to use it with Bio.Phylo 155s test_Phylo_matplotlib ... skipping. Install matplotlib if you want to use Bio.Phylo._utils. 155s test_Phylo_networkx ... skipping. Install networkx if you wish to use it with Bio.Phylo 155s test_PopGen_GenePop_nodepend ... ok 155s test_Prank_tool ... skipping. Install PRANK if you want to use the Bio.Align.Applications wrapper. 155s test_Probcons_tool ... skipping. Install PROBCONS if you want to use the Bio.Align.Applications wrapper. 155s test_ProtParam ... ok 155s test_RCSBFormats ... ok 155s test_Restriction ... ok 155s test_SCOP_Astral ... ok 155s test_SCOP_Cla ... ok 155s test_SCOP_Des ... ok 155s test_SCOP_Dom ... ok 155s test_SCOP_Hie ... ok 155s test_SCOP_Raf ... ok 155s test_SCOP_Residues ... ok 155s test_SCOP_Scop ... ok 155s test_SVDSuperimposer ... ok 155s test_SearchIO_blast_tab ... ok 155s test_SearchIO_blast_tab_index ... ok 155s test_SearchIO_blast_xml ... ok 157s test_SearchIO_blast_xml_index ... ok 157s test_SearchIO_blat_psl ... ok 157s test_SearchIO_blat_psl_index ... ok 157s test_SearchIO_exonerate ... ok 157s test_SearchIO_exonerate_text_index ... ok 157s test_SearchIO_exonerate_vulgar_index ... ok 157s test_SearchIO_fasta_m10 ... ok 157s test_SearchIO_fasta_m10_index ... ok 157s test_SearchIO_hhsuite2_text ... ok 157s test_SearchIO_hmmer2_text ... ok 157s test_SearchIO_hmmer2_text_index ... ok 157s test_SearchIO_hmmer3_domtab ... ok 157s test_SearchIO_hmmer3_domtab_index ... ok 157s test_SearchIO_hmmer3_tab ... ok 157s test_SearchIO_hmmer3_tab_index ... ok 157s test_SearchIO_hmmer3_text ... ok 157s test_SearchIO_hmmer3_text_index ... ok 157s test_SearchIO_interproscan_xml ... ok 157s test_SearchIO_model ... ok 158s test_SearchIO_write ... ok 158s test_SeqFeature ... ok 170s test_SeqIO ... ok 171s test_SeqIO_AbiIO ... ok 171s test_SeqIO_FastaIO ... ok 171s test_SeqIO_Gck ... ok 171s test_SeqIO_Gfa ... ok 171s test_SeqIO_Insdc ... ok 171s test_SeqIO_NibIO ... ok 172s test_SeqIO_PdbIO ... ok 172s test_SeqIO_QualityIO ... ok 172s test_SeqIO_SeqXML ... ok 172s test_SeqIO_SffIO ... ok 173s test_SeqIO_SnapGene ... ok 173s test_SeqIO_TwoBitIO ... ok 173s test_SeqIO_UniprotIO ... ok 173s test_SeqIO_Xdna ... ok 174s test_SeqIO_features ... ok 184s test_SeqIO_index ... ok 184s test_SeqIO_online ... skipping. internet not available 184s test_SeqIO_write ... ok 184s test_SeqRecord ... ok 184s test_SeqUtils ... ok 185s test_Seq_objs ... ok 186s test_SwissProt ... ok 186s test_TCoffee_tool ... skipping. Install TCOFFEE if you want to use the Bio.Align.Applications wrapper. 186s test_TogoWS ... skipping. internet not available 186s test_TreeConstruction ... ok 186s test_UniGene ... ok 186s test_UniProt ... skipping. internet not available 186s test_UniProt_GOA ... ok 186s test_align ... ok 186s test_align_substitution_matrices ... ok 188s test_bgzf ... ok 188s test_cellosaurus ... ok 192s test_codonalign ... ok 193s test_geo ... ok 193s test_kNN ... ok 193s test_motifs ... ok 193s test_motifs_online ... skipping. internet not available 193s test_pairwise2 ... /usr/lib/python3/dist-packages/Bio/pairwise2.py:278: BiopythonDeprecationWarning: Bio.pairwise2 has been deprecated, and we intend to remove it in a future release of Biopython. As an alternative, please consider using Bio.Align.PairwiseAligner as a replacement, and contact the Biopython developers if you still need the Bio.pairwise2 module. 193s warnings.warn( 193s ok 193s test_pairwise2_no_C ... ok 193s test_pairwise_aligner ... ok 193s test_pairwise_alignment_map ... ok 200s test_phenotype ... ok 200s test_phenotype_fit ... skipping. Install SciPy if you want to use Bio.phenotype fit functionality. 200s test_phyml_tool ... skipping. Couldn't find the PhyML software. Install PhyML 3.0 or later if you want to use the Bio.Phylo.Applications wrapper. 200s test_prodoc ... ok 200s test_prosite ... ok 200s test_raxml_tool ... skipping. Install RAxML (binary raxmlHPC) if you want to test the Bio.Phylo.Applications wrapper. 200s test_samtools_tool ... skipping. Install samtools and correctly set the file path to the program if you want to use it from Biopython 200s test_seq ... ok 200s test_translate ... ok 200s ---------------------------------------------------------------------- 200s Ran 216 tests in 94.656 seconds 200s 200s Skipping any tests requiring internet access 200s Python version: 3.13.5 (main, Jun 25 2025, 18:55:22) [GCC 14.3.0] 200s Operating system: posix linux 200s :0: ResourceWarning: unclosed file <_io.TextIOWrapper name='Fasta/protein_lib.fa' mode='rt' encoding='UTF-8'> 200s :0: ResourceWarning: unclosed file <_io.TextIOWrapper name='Fasta/nucleotide_lib.fa' mode='rt' encoding='UTF-8'> 201s autopkgtest [03:43:44]: test dependencies: -----------------------] 201s autopkgtest [03:43:44]: test dependencies: - - - - - - - - - - results - - - - - - - - - - 201s dependencies PASS 201s autopkgtest [03:43:44]: test full_suite: preparing testbed 219s Creating nova instance adt-questing-s390x-python-biopython-20250712-034022-juju-7f2275-prod-proposed-migration-environment-15-60340907-7323-422b-8cba-37c7767fbf63 from image adt/ubuntu-questing-s390x-server-20250712.img (UUID 7b6092a6-dbc8-44b8-9db1-c057a8910204)... 249s autopkgtest [03:44:32]: testbed dpkg architecture: s390x 249s autopkgtest [03:44:32]: testbed apt version: 3.1.3 249s autopkgtest [03:44:32]: @@@@@@@@@@@@@@@@@@@@ test bed setup 249s autopkgtest [03:44:32]: testbed release detected to be: questing 250s autopkgtest [03:44:33]: updating testbed package index (apt update) 250s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [249 kB] 250s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 250s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 250s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 250s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [39.9 kB] 250s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [207 kB] 250s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [15.4 kB] 250s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main s390x Packages [56.3 kB] 250s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x Packages [176 kB] 250s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse s390x Packages [4452 B] 250s Fetched 749 kB in 0s (1607 kB/s) 251s Reading package lists... 251s autopkgtest [03:44:34]: upgrading testbed (apt dist-upgrade and autopurge) 253s Reading package lists... 253s Building dependency tree... 253s Reading state information... 253s Calculating upgrade... 253s The following packages will be upgraded: 253s htop 253s 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 253s Need to get 189 kB of archives. 253s After this operation, 0 B of additional disk space will be used. 253s Get:1 http://ftpmaster.internal/ubuntu questing/main s390x htop s390x 3.4.1-5 [189 kB] 253s Fetched 189 kB in 0s (12.1 MB/s) 253s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 86057 files and directories currently installed.) 253s Preparing to unpack .../htop_3.4.1-5_s390x.deb ... 253s Unpacking htop (3.4.1-5) over (3.4.1-4) ... 253s Setting up htop (3.4.1-5) ... 253s Processing triggers for man-db (2.13.1-1) ... 253s Reading package lists... 254s Building dependency tree... 254s Reading state information... 254s Solving dependencies... 254s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 256s Reading package lists... 256s Building dependency tree... 256s Reading state information... 257s Solving dependencies... 257s The following NEW packages will be installed: 257s autoconf automake autopoint autotools-dev blt build-essential bwa clustalo 257s cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu debhelper debugedit 257s dh-autoreconf dh-python dh-strip-nondeterminism dialign docutils-common dssp 257s dwz fasttree flex fontconfig-config fonts-dejavu-core fonts-dejavu-mono 257s fonts-font-awesome fonts-lato fonts-lmodern fonts-lyx fonts-urw-base35 g++ 257s g++-14 g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14 257s gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu gettext ghostscript hevea 257s hicolor-icon-theme imagemagick imagemagick-7-common imagemagick-7.q16 257s intltool-debian libamd3 libaom3 libapache-pom-java libarchive-zip-perl 257s libargtable2-0 libarpack2t64 libasan8 libavahi-client3 libavahi-common-data 257s libavahi-common3 libblas3 libcairo2 libcc1-0 libcifpp-data libcifpp7 257s libcolamd3 libcommons-logging-java libcommons-parent-java libcups2t64 257s libde265-0 libdebhelper-perl libdeflate0 libexpat1-dev libfftw3-double3 257s libfile-stripnondeterminism-perl libfontbox-java libfontconfig1 libfontenc1 257s libfreetype6 libgcc-14-dev libgfortran5 libglpk40 libgomp1 libgraphite2-3 257s libgs-common libgs10 libgs10-common libharfbuzz0b libheif-plugin-aomdec 257s libheif-plugin-libde265 libheif1 libice6 libidn12 libigraph3t64 libijs-0.35 257s libimagequant0 libisl23 libitm1 libjbig0 libjbig2dec0 libjpeg-turbo8 257s libjpeg8 libjs-jquery libjs-jquery-ui libjs-sphinxdoc libjs-underscore 257s libjson-perl libkpathsea6 liblapack3 liblcms2-2 liblqr-1-0 libltdl7 257s libmagickcore-7.q16-10 libmagickwand-7.q16-10 libmbedcrypto16 libmbedtls21 257s libmbedx509-7 libmpc3 libmpfi0 libmysqlclient24 libnetpbm11t64 libopenjp2-7 257s libpaper-utils libpaper2 libpdfbox-java libpixman-1-0 libplfit0 libpotrace0 257s libptexenc1 libpython3-all-dev libpython3-dev libpython3.13-dev 257s libqhull-r8.0 libraqm0 libraw23t64 libsharpyuv0 libsm6 libstdc++-14-dev 257s libsuitesparseconfig7 libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 257s libtiff6 libtk8.6 libtool libubsan1 libwebp7 libwebpdemux2 libwebpmux3 257s libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4 257s libxrender1 libxslt1.1 libxss1 libxt6t64 libzzip-0-13t64 m4 mafft 257s mysql-common ncbi-blast+ ncbi-data netpbm phylip po-debconf poppler-data 257s prank preview-latex-style probcons python-biopython-doc 257s python-matplotlib-data python3-alabaster python3-all python3-all-dev 257s python3-biopython python3-biopython-sql python3-brotli python3-cairo 257s python3-charset-normalizer python3-contourpy python3-cycler 257s python3-decorator python3-defusedxml python3-dev python3-docutils 257s python3-fonttools python3-freetype python3-fs python3-igraph 257s python3-imagesize python3-kiwisolver python3-lxml python3-lz4 257s python3-matplotlib python3-mmtf python3-mpmath python3-msgpack 257s python3-mysqldb python3-networkx python3-numpy python3-numpy-dev 257s python3-numpydoc python3-pil python3-pil.imagetk python3-platformdirs 257s python3-rdflib python3-reportlab python3-rlpycairo python3-roman 257s python3-scipy python3-snowballstemmer python3-sphinx 257s python3-sphinx-rtd-theme python3-sphinxcontrib.jquery python3-sympy 257s python3-tabulate python3-texttable python3-tk python3-ufolib2 python3.13-dev 257s python3.13-tk sgml-base sphinx-common sphinx-rtd-theme-common t-coffee 257s t1utils tex-common texlive-base texlive-binaries texlive-fonts-recommended 257s texlive-latex-base texlive-latex-extra texlive-latex-recommended 257s texlive-pictures tk8.6-blt2.5 unicode-data w3c-sgml-lib wise wise-data 257s x11-common xdg-utils xfonts-encodings xfonts-utils xml-core zlib1g-dev 257s 0 upgraded, 247 newly installed, 0 to remove and 0 not upgraded. 257s Need to get 336 MB of archives. 257s After this operation, 1241 MB of additional disk space will be used. 257s Get:1 http://ftpmaster.internal/ubuntu questing/main s390x m4 s390x 1.4.19-8 [259 kB] 257s Get:2 http://ftpmaster.internal/ubuntu questing/main s390x flex s390x 2.6.4-8.2build1 [311 kB] 257s Get:3 http://ftpmaster.internal/ubuntu questing/main s390x fonts-lato all 2.015-1 [2781 kB] 257s Get:4 http://ftpmaster.internal/ubuntu questing/main s390x libgomp1 s390x 15.1.0-8ubuntu1 [154 kB] 257s Get:5 http://ftpmaster.internal/ubuntu questing/main s390x libfftw3-double3 s390x 3.3.10-2fakesync1build1 [511 kB] 257s Get:6 http://ftpmaster.internal/ubuntu questing/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB] 257s Get:7 http://ftpmaster.internal/ubuntu questing/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 257s Get:8 http://ftpmaster.internal/ubuntu questing/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 257s Get:9 http://ftpmaster.internal/ubuntu questing/main s390x libfontenc1 s390x 1:1.1.8-1build1 [14.8 kB] 257s Get:10 http://ftpmaster.internal/ubuntu questing/main s390x x11-common all 1:7.7+24ubuntu1 [22.4 kB] 257s Get:11 http://ftpmaster.internal/ubuntu questing/main s390x xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] 257s Get:12 http://ftpmaster.internal/ubuntu questing/main s390x xfonts-utils s390x 1:7.7+7 [101 kB] 257s Get:13 http://ftpmaster.internal/ubuntu questing/main s390x fonts-urw-base35 all 20200910-8 [11.0 MB] 257s Get:14 http://ftpmaster.internal/ubuntu questing/main s390x fontconfig-config s390x 2.15.0-2.3ubuntu1 [38.1 kB] 257s Get:15 http://ftpmaster.internal/ubuntu questing/main s390x libfontconfig1 s390x 2.15.0-2.3ubuntu1 [149 kB] 257s Get:16 http://ftpmaster.internal/ubuntu questing/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB] 257s Get:17 http://ftpmaster.internal/ubuntu questing/main s390x libaom3 s390x 3.12.1-1 [1491 kB] 257s Get:18 http://ftpmaster.internal/ubuntu questing/main s390x libheif-plugin-aomdec s390x 1.19.8-1 [11.6 kB] 257s Get:19 http://ftpmaster.internal/ubuntu questing/main s390x libde265-0 s390x 1.0.16-1 [175 kB] 257s Get:20 http://ftpmaster.internal/ubuntu questing/main s390x libheif-plugin-libde265 s390x 1.19.8-1 [9054 B] 257s Get:21 http://ftpmaster.internal/ubuntu questing/main s390x libheif1 s390x 1.19.8-1 [416 kB] 257s Get:22 http://ftpmaster.internal/ubuntu questing/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB] 257s Get:23 http://ftpmaster.internal/ubuntu questing/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB] 257s Get:24 http://ftpmaster.internal/ubuntu questing/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 257s Get:25 http://ftpmaster.internal/ubuntu questing/main s390x liblcms2-2 s390x 2.16-2 [175 kB] 257s Get:26 http://ftpmaster.internal/ubuntu questing/universe s390x liblqr-1-0 s390x 0.4.2-2.1build2 [32.6 kB] 257s Get:27 http://ftpmaster.internal/ubuntu questing/main s390x libltdl7 s390x 2.5.4-4 [43.8 kB] 257s Get:28 http://ftpmaster.internal/ubuntu questing/main s390x libopenjp2-7 s390x 2.5.3-2 [207 kB] 257s Get:29 http://ftpmaster.internal/ubuntu questing/main s390x libraw23t64 s390x 0.21.4-2 [415 kB] 257s Get:30 http://ftpmaster.internal/ubuntu questing/main s390x libdeflate0 s390x 1.23-2 [46.0 kB] 257s Get:31 http://ftpmaster.internal/ubuntu questing/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB] 257s Get:32 http://ftpmaster.internal/ubuntu questing/main s390x libtiff6 s390x 4.7.0-3ubuntu1 [219 kB] 257s Get:33 http://ftpmaster.internal/ubuntu questing/main s390x libwebpdemux2 s390x 1.5.0-0.1 [12.6 kB] 257s Get:34 http://ftpmaster.internal/ubuntu questing/main s390x libwebpmux3 s390x 1.5.0-0.1 [25.8 kB] 257s Get:35 http://ftpmaster.internal/ubuntu questing/universe s390x imagemagick-7-common all 8:7.1.1.43+dfsg1-1ubuntu1 [69.5 kB] 257s Get:36 http://ftpmaster.internal/ubuntu questing/universe s390x libmagickcore-7.q16-10 s390x 8:7.1.1.43+dfsg1-1ubuntu1 [2038 kB] 258s Get:37 http://ftpmaster.internal/ubuntu questing/universe s390x libmagickwand-7.q16-10 s390x 8:7.1.1.43+dfsg1-1ubuntu1 [375 kB] 258s Get:38 http://ftpmaster.internal/ubuntu questing/main s390x poppler-data all 0.4.12-1 [2060 kB] 258s Get:39 http://ftpmaster.internal/ubuntu questing/main s390x python3-numpy-dev s390x 1:2.2.4+ds-1ubuntu1 [147 kB] 258s Get:40 http://ftpmaster.internal/ubuntu questing/main s390x libblas3 s390x 3.12.1-2build1 [252 kB] 258s Get:41 http://ftpmaster.internal/ubuntu questing/main s390x libgfortran5 s390x 15.1.0-8ubuntu1 [620 kB] 258s Get:42 http://ftpmaster.internal/ubuntu questing/main s390x liblapack3 s390x 3.12.1-2build1 [2970 kB] 258s Get:43 http://ftpmaster.internal/ubuntu questing/main s390x python3-numpy s390x 1:2.2.4+ds-1ubuntu1 [4399 kB] 258s Get:44 http://ftpmaster.internal/ubuntu questing/main s390x autoconf all 2.72-3.1ubuntu1 [384 kB] 258s Get:45 http://ftpmaster.internal/ubuntu questing/main s390x autotools-dev all 20240727.1 [43.4 kB] 258s Get:46 http://ftpmaster.internal/ubuntu questing/main s390x automake all 1:1.17-4ubuntu1 [572 kB] 258s Get:47 http://ftpmaster.internal/ubuntu questing/main s390x autopoint all 0.23.1-2build1 [619 kB] 258s Get:48 http://ftpmaster.internal/ubuntu questing/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB] 258s Get:49 http://ftpmaster.internal/ubuntu questing/main s390x libxrender1 s390x 1:0.9.12-1 [20.9 kB] 258s Get:50 http://ftpmaster.internal/ubuntu questing/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB] 258s Get:51 http://ftpmaster.internal/ubuntu questing/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B] 258s Get:52 http://ftpmaster.internal/ubuntu questing/main s390x libtk8.6 s390x 8.6.16-1 [830 kB] 258s Get:53 http://ftpmaster.internal/ubuntu questing/main s390x tk8.6-blt2.5 s390x 2.5.3+dfsg-8 [657 kB] 258s Get:54 http://ftpmaster.internal/ubuntu questing/main s390x blt s390x 2.5.3+dfsg-8 [4826 B] 258s Get:55 http://ftpmaster.internal/ubuntu questing/main s390x libisl23 s390x 0.27-1 [704 kB] 258s Get:56 http://ftpmaster.internal/ubuntu questing/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB] 258s Get:57 http://ftpmaster.internal/ubuntu questing/main s390x cpp-14-s390x-linux-gnu s390x 14.3.0-1ubuntu1 [9568 kB] 258s Get:58 http://ftpmaster.internal/ubuntu questing/main s390x cpp-14 s390x 14.3.0-1ubuntu1 [1028 B] 258s Get:59 http://ftpmaster.internal/ubuntu questing/main s390x cpp-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [5556 B] 258s Get:60 http://ftpmaster.internal/ubuntu questing/main s390x cpp s390x 4:14.2.0-1ubuntu1 [22.4 kB] 258s Get:61 http://ftpmaster.internal/ubuntu questing/main s390x libcc1-0 s390x 15.1.0-8ubuntu1 [49.9 kB] 258s Get:62 http://ftpmaster.internal/ubuntu questing/main s390x libitm1 s390x 15.1.0-8ubuntu1 [31.1 kB] 258s Get:63 http://ftpmaster.internal/ubuntu questing/main s390x libasan8 s390x 15.1.0-8ubuntu1 [2971 kB] 258s Get:64 http://ftpmaster.internal/ubuntu questing/main s390x libubsan1 s390x 15.1.0-8ubuntu1 [1211 kB] 259s Get:65 http://ftpmaster.internal/ubuntu questing/main s390x libgcc-14-dev s390x 14.3.0-1ubuntu1 [1036 kB] 259s Get:66 http://ftpmaster.internal/ubuntu questing/main s390x gcc-14-s390x-linux-gnu s390x 14.3.0-1ubuntu1 [18.7 MB] 259s Get:67 http://ftpmaster.internal/ubuntu questing/main s390x gcc-14 s390x 14.3.0-1ubuntu1 [538 kB] 259s Get:68 http://ftpmaster.internal/ubuntu questing/main s390x gcc-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1204 B] 259s Get:69 http://ftpmaster.internal/ubuntu questing/main s390x gcc s390x 4:14.2.0-1ubuntu1 [5004 B] 259s Get:70 http://ftpmaster.internal/ubuntu questing/main s390x libstdc++-14-dev s390x 14.3.0-1ubuntu1 [2935 kB] 259s Get:71 http://ftpmaster.internal/ubuntu questing/main s390x g++-14-s390x-linux-gnu s390x 14.3.0-1ubuntu1 [11.0 MB] 259s Get:72 http://ftpmaster.internal/ubuntu questing/main s390x g++-14 s390x 14.3.0-1ubuntu1 [27.4 kB] 259s Get:73 http://ftpmaster.internal/ubuntu questing/main s390x g++-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [956 B] 259s Get:74 http://ftpmaster.internal/ubuntu questing/main s390x g++ s390x 4:14.2.0-1ubuntu1 [1080 B] 259s Get:75 http://ftpmaster.internal/ubuntu questing/main s390x build-essential s390x 12.12ubuntu1 [5090 B] 259s Get:76 http://ftpmaster.internal/ubuntu questing/universe s390x bwa s390x 0.7.18-1 [249 kB] 259s Get:77 http://ftpmaster.internal/ubuntu questing/universe s390x libargtable2-0 s390x 13-4 [16.7 kB] 259s Get:78 http://ftpmaster.internal/ubuntu questing/universe s390x clustalo s390x 1.2.4-8build1 [218 kB] 259s Get:79 http://ftpmaster.internal/ubuntu questing/main s390x libdebhelper-perl all 13.24.2ubuntu1 [95.7 kB] 259s Get:80 http://ftpmaster.internal/ubuntu questing/main s390x libtool all 2.5.4-4 [168 kB] 259s Get:81 http://ftpmaster.internal/ubuntu questing/main s390x dh-autoreconf all 20 [16.1 kB] 259s Get:82 http://ftpmaster.internal/ubuntu questing/main s390x libarchive-zip-perl all 1.68-1 [90.2 kB] 259s Get:83 http://ftpmaster.internal/ubuntu questing/main s390x libfile-stripnondeterminism-perl all 1.14.1-2 [20.3 kB] 259s Get:84 http://ftpmaster.internal/ubuntu questing/main s390x dh-strip-nondeterminism all 1.14.1-2 [5064 B] 259s Get:85 http://ftpmaster.internal/ubuntu questing/main s390x debugedit s390x 1:5.1-2 [50.1 kB] 259s Get:86 http://ftpmaster.internal/ubuntu questing/main s390x dwz s390x 0.15-1build6 [122 kB] 259s Get:87 http://ftpmaster.internal/ubuntu questing/main s390x gettext s390x 0.23.1-2build1 [1518 kB] 259s Get:88 http://ftpmaster.internal/ubuntu questing/main s390x intltool-debian all 0.35.0+20060710.6 [23.2 kB] 259s Get:89 http://ftpmaster.internal/ubuntu questing/main s390x po-debconf all 1.0.21+nmu1 [233 kB] 259s Get:90 http://ftpmaster.internal/ubuntu questing/main s390x debhelper all 13.24.2ubuntu1 [896 kB] 259s Get:91 http://ftpmaster.internal/ubuntu questing/universe s390x dh-python all 6.20250414 [119 kB] 259s Get:92 http://ftpmaster.internal/ubuntu questing/universe s390x dialign s390x 2.2.1-13 [155 kB] 259s Get:93 http://ftpmaster.internal/ubuntu questing/main s390x sgml-base all 1.31+nmu1 [11.0 kB] 259s Get:94 http://ftpmaster.internal/ubuntu questing/main s390x xml-core all 0.19 [20.3 kB] 259s Get:95 http://ftpmaster.internal/ubuntu questing/main s390x docutils-common all 0.21.2+dfsg-2 [131 kB] 260s Get:96 http://ftpmaster.internal/ubuntu questing/universe s390x libcifpp-data all 7.0.9-1 [481 kB] 260s Get:97 http://ftpmaster.internal/ubuntu questing/universe s390x libcifpp7 s390x 7.0.9-1 [1103 kB] 260s Get:98 http://ftpmaster.internal/ubuntu questing/universe s390x dssp s390x 4.4.10-1 [784 kB] 260s Get:99 http://ftpmaster.internal/ubuntu questing/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 260s Get:100 http://ftpmaster.internal/ubuntu questing/universe s390x fonts-lmodern all 2.005-1 [4799 kB] 260s Get:101 http://ftpmaster.internal/ubuntu questing/universe s390x fonts-lyx all 2.4.3-1 [171 kB] 260s Get:102 http://ftpmaster.internal/ubuntu questing/main s390x libgs-common all 10.05.0dfsg1-0ubuntu1 [176 kB] 260s Get:103 http://ftpmaster.internal/ubuntu questing/main s390x libgs10-common all 10.05.0dfsg1-0ubuntu1 [490 kB] 260s Get:104 http://ftpmaster.internal/ubuntu questing/main s390x libavahi-common-data s390x 0.8-16ubuntu2 [31.0 kB] 260s Get:105 http://ftpmaster.internal/ubuntu questing/main s390x libavahi-common3 s390x 0.8-16ubuntu2 [23.5 kB] 260s Get:106 http://ftpmaster.internal/ubuntu questing/main s390x libavahi-client3 s390x 0.8-16ubuntu2 [26.3 kB] 260s Get:107 http://ftpmaster.internal/ubuntu questing/main s390x libcups2t64 s390x 2.4.12-0ubuntu1 [282 kB] 260s Get:108 http://ftpmaster.internal/ubuntu questing/main s390x libidn12 s390x 1.43-1 [58.9 kB] 260s Get:109 http://ftpmaster.internal/ubuntu questing/main s390x libijs-0.35 s390x 0.35-15.3 [15.4 kB] 260s Get:110 http://ftpmaster.internal/ubuntu questing/main s390x libjbig2dec0 s390x 0.20-1build3 [69.3 kB] 260s Get:111 http://ftpmaster.internal/ubuntu questing/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB] 260s Get:112 http://ftpmaster.internal/ubuntu questing/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB] 260s Get:113 http://ftpmaster.internal/ubuntu questing/main s390x libsm6 s390x 2:1.2.6-1 [18.3 kB] 260s Get:114 http://ftpmaster.internal/ubuntu questing/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB] 260s Get:115 http://ftpmaster.internal/ubuntu questing/main s390x libgs10 s390x 10.05.0dfsg1-0ubuntu1 [3974 kB] 260s Get:116 http://ftpmaster.internal/ubuntu questing/main s390x ghostscript s390x 10.05.0dfsg1-0ubuntu1 [42.8 kB] 260s Get:117 http://ftpmaster.internal/ubuntu questing/universe s390x libnetpbm11t64 s390x 2:11.10.02-1build1 [123 kB] 260s Get:118 http://ftpmaster.internal/ubuntu questing/universe s390x netpbm s390x 2:11.10.02-1build1 [2215 kB] 260s Get:119 http://ftpmaster.internal/ubuntu questing/universe s390x tex-common all 6.19 [29.8 kB] 260s Get:120 http://ftpmaster.internal/ubuntu questing/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB] 260s Get:121 http://ftpmaster.internal/ubuntu questing/universe s390x libkpathsea6 s390x 2024.20240313.70630+ds-6 [67.0 kB] 260s Get:122 http://ftpmaster.internal/ubuntu questing/universe s390x libptexenc1 s390x 2024.20240313.70630+ds-6 [43.4 kB] 260s Get:123 http://ftpmaster.internal/ubuntu questing/universe s390x libsynctex2 s390x 2024.20240313.70630+ds-6 [64.8 kB] 260s Get:124 http://ftpmaster.internal/ubuntu questing/universe s390x libtexlua53-5 s390x 2024.20240313.70630+ds-6 [131 kB] 260s Get:125 http://ftpmaster.internal/ubuntu questing/main s390x t1utils s390x 1.41-4build3 [65.6 kB] 260s Get:126 http://ftpmaster.internal/ubuntu questing/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB] 260s Get:127 http://ftpmaster.internal/ubuntu questing/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB] 260s Get:128 http://ftpmaster.internal/ubuntu questing/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B] 260s Get:129 http://ftpmaster.internal/ubuntu questing/main s390x libcairo2 s390x 1.18.4-1 [580 kB] 260s Get:130 http://ftpmaster.internal/ubuntu questing/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB] 260s Get:131 http://ftpmaster.internal/ubuntu questing/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB] 260s Get:132 http://ftpmaster.internal/ubuntu questing/universe s390x libmpfi0 s390x 1.5.4+ds-4 [34.1 kB] 260s Get:133 http://ftpmaster.internal/ubuntu questing/universe s390x libpotrace0 s390x 1.16-2build1 [18.7 kB] 260s Get:134 http://ftpmaster.internal/ubuntu questing/universe s390x libteckit0 s390x 2.5.12+ds1-1 [433 kB] 260s Get:135 http://ftpmaster.internal/ubuntu questing/main s390x libxmu6 s390x 2:1.1.3-3build2 [53.0 kB] 260s Get:136 http://ftpmaster.internal/ubuntu questing/main s390x libxpm4 s390x 1:3.5.17-1build2 [41.2 kB] 260s Get:137 http://ftpmaster.internal/ubuntu questing/main s390x libxaw7 s390x 2:1.0.16-1 [201 kB] 260s Get:138 http://ftpmaster.internal/ubuntu questing/main s390x libxi6 s390x 2:1.8.2-1 [35.4 kB] 260s Get:139 http://ftpmaster.internal/ubuntu questing/universe s390x libzzip-0-13t64 s390x 0.13.78+dfsg.1-0.1 [29.8 kB] 260s Get:140 http://ftpmaster.internal/ubuntu questing/universe s390x texlive-binaries s390x 2024.20240313.70630+ds-6 [9170 kB] 260s Get:141 http://ftpmaster.internal/ubuntu questing/main s390x xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 260s Get:142 http://ftpmaster.internal/ubuntu questing/universe s390x texlive-base all 2024.20250309-1 [22.7 MB] 261s Get:143 http://ftpmaster.internal/ubuntu questing/main s390x hicolor-icon-theme all 0.18-2 [13.3 kB] 261s Get:144 http://ftpmaster.internal/ubuntu questing/universe s390x imagemagick-7.q16 s390x 8:7.1.1.43+dfsg1-1ubuntu1 [704 kB] 261s Get:145 http://ftpmaster.internal/ubuntu questing/universe s390x imagemagick s390x 8:7.1.1.43+dfsg1-1ubuntu1 [14.1 kB] 261s Get:146 http://ftpmaster.internal/ubuntu questing/universe s390x hevea s390x 2.36-2 [2045 kB] 261s Get:147 http://ftpmaster.internal/ubuntu questing/main s390x libsuitesparseconfig7 s390x 1:7.10.1+dfsg-1 [21.3 kB] 261s Get:148 http://ftpmaster.internal/ubuntu questing/universe s390x libamd3 s390x 1:7.10.1+dfsg-1 [43.3 kB] 261s Get:149 http://ftpmaster.internal/ubuntu questing/universe s390x libapache-pom-java all 33-2 [5874 B] 261s Get:150 http://ftpmaster.internal/ubuntu questing/universe s390x libarpack2t64 s390x 3.9.1-6 [110 kB] 261s Get:151 http://ftpmaster.internal/ubuntu questing/main s390x libcolamd3 s390x 1:7.10.1+dfsg-1 [31.2 kB] 261s Get:152 http://ftpmaster.internal/ubuntu questing/universe s390x libcommons-parent-java all 56-1 [10.7 kB] 261s Get:153 http://ftpmaster.internal/ubuntu questing/universe s390x libcommons-logging-java all 1.3.0-1ubuntu1 [63.8 kB] 261s Get:154 http://ftpmaster.internal/ubuntu questing/main s390x libexpat1-dev s390x 2.7.1-1 [148 kB] 261s Get:155 http://ftpmaster.internal/ubuntu questing/universe s390x libglpk40 s390x 5.0-1build2 [406 kB] 261s Get:156 http://ftpmaster.internal/ubuntu questing/universe s390x libplfit0 s390x 0.9.6+ds-2ubuntu1 [29.7 kB] 261s Get:157 http://ftpmaster.internal/ubuntu questing/universe s390x libigraph3t64 s390x 0.10.15+ds-3build1 [1051 kB] 261s Get:158 http://ftpmaster.internal/ubuntu questing/main s390x libimagequant0 s390x 2.18.0-1build1 [43.3 kB] 261s Get:159 http://ftpmaster.internal/ubuntu questing/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 261s Get:160 http://ftpmaster.internal/ubuntu questing/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 261s Get:161 http://ftpmaster.internal/ubuntu questing/main s390x libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 261s Get:162 http://ftpmaster.internal/ubuntu questing/main s390x libjs-sphinxdoc all 8.2.3-1ubuntu2 [28.0 kB] 261s Get:163 http://ftpmaster.internal/ubuntu questing/main s390x libjson-perl all 4.10000-1 [81.9 kB] 261s Get:164 http://ftpmaster.internal/ubuntu questing/universe s390x libmbedcrypto16 s390x 3.6.2-3ubuntu1 [261 kB] 261s Get:165 http://ftpmaster.internal/ubuntu questing/universe s390x libmbedx509-7 s390x 3.6.2-3ubuntu1 [34.9 kB] 261s Get:166 http://ftpmaster.internal/ubuntu questing/universe s390x libmbedtls21 s390x 3.6.2-3ubuntu1 [122 kB] 261s Get:167 http://ftpmaster.internal/ubuntu questing/main s390x mysql-common all 5.8+1.1.1ubuntu1 [6922 B] 261s Get:168 http://ftpmaster.internal/ubuntu questing/main s390x libmysqlclient24 s390x 8.4.5-0ubuntu3 [1295 kB] 261s Get:169 http://ftpmaster.internal/ubuntu questing/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB] 261s Get:170 http://ftpmaster.internal/ubuntu questing/main s390x libpython3.13-dev s390x 3.13.5-2 [5591 kB] 261s Get:171 http://ftpmaster.internal/ubuntu questing/main s390x libpython3-dev s390x 3.13.5-1 [10.8 kB] 261s Get:172 http://ftpmaster.internal/ubuntu questing/main s390x libpython3-all-dev s390x 3.13.5-1 [910 B] 261s Get:173 http://ftpmaster.internal/ubuntu questing/universe s390x libqhull-r8.0 s390x 2020.2-6build1 [199 kB] 261s Get:174 http://ftpmaster.internal/ubuntu questing/main s390x libraqm0 s390x 0.10.2-1 [15.8 kB] 261s Get:175 http://ftpmaster.internal/ubuntu questing/main s390x libxslt1.1 s390x 1.1.43-0exp1 [163 kB] 261s Get:176 http://ftpmaster.internal/ubuntu questing/universe s390x mafft s390x 7.505-1 [766 kB] 261s Get:177 http://ftpmaster.internal/ubuntu questing/universe s390x ncbi-data all 6.1.20170106+dfsg2-6 [3969 kB] 261s Get:178 http://ftpmaster.internal/ubuntu questing/universe s390x ncbi-blast+ s390x 2.16.0+ds-7 [15.2 MB] 262s Get:179 http://ftpmaster.internal/ubuntu questing/universe s390x phylip s390x 1:3.697+dfsg-4build1 [1051 kB] 262s Get:180 http://ftpmaster.internal/ubuntu questing/universe s390x prank s390x 0.0.170427+dfsg-3 [357 kB] 262s Get:181 http://ftpmaster.internal/ubuntu questing/universe s390x preview-latex-style all 13.2-1.1 [347 kB] 262s Get:182 http://ftpmaster.internal/ubuntu questing/universe s390x probcons s390x 1.12-14 [109 kB] 262s Get:183 http://ftpmaster.internal/ubuntu questing/universe s390x python-biopython-doc all 1.85+dfsg-4 [18.2 MB] 262s Get:184 http://ftpmaster.internal/ubuntu questing/universe s390x python-matplotlib-data all 3.10.1+dfsg1-4 [2930 kB] 262s Get:185 http://ftpmaster.internal/ubuntu questing/main s390x python3-all s390x 3.13.5-1 [884 B] 262s Get:186 http://ftpmaster.internal/ubuntu questing/main s390x python3.13-dev s390x 3.13.5-2 [508 kB] 262s Get:187 http://ftpmaster.internal/ubuntu questing/main s390x python3-dev s390x 3.13.5-1 [26.6 kB] 262s Get:188 http://ftpmaster.internal/ubuntu questing/main s390x python3-all-dev s390x 3.13.5-1 [906 B] 262s Get:189 http://ftpmaster.internal/ubuntu questing/universe s390x python3-charset-normalizer s390x 3.4.2-1 [129 kB] 262s Get:190 http://ftpmaster.internal/ubuntu questing/main s390x python3.13-tk s390x 3.13.5-2 [108 kB] 262s Get:191 http://ftpmaster.internal/ubuntu questing/main s390x python3-tk s390x 3.13.4-1 [9884 B] 262s Get:192 http://ftpmaster.internal/ubuntu questing/universe s390x python3-pil.imagetk s390x 11.1.0-5build1 [9668 B] 262s Get:193 http://ftpmaster.internal/ubuntu questing/main s390x python3-pil s390x 11.1.0-5build1 [498 kB] 262s Get:194 http://ftpmaster.internal/ubuntu questing/main s390x python3-cairo s390x 1.27.0-2 [120 kB] 262s Get:195 http://ftpmaster.internal/ubuntu questing/universe s390x python3-freetype all 2.5.1-1 [92.3 kB] 262s Get:196 http://ftpmaster.internal/ubuntu questing/universe s390x python3-rlpycairo all 0.3.0-3 [9130 B] 262s Get:197 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x python3-reportlab all 4.4.2-1 [1145 kB] 262s Get:198 http://ftpmaster.internal/ubuntu questing/universe s390x w3c-sgml-lib all 1.3-3 [280 kB] 262s Get:199 http://ftpmaster.internal/ubuntu questing/universe s390x python3-biopython s390x 1.85+dfsg-4 [1745 kB] 262s Get:200 http://ftpmaster.internal/ubuntu questing/universe s390x python3-biopython-sql all 1.85+dfsg-4 [26.4 kB] 262s Get:201 http://ftpmaster.internal/ubuntu questing/universe s390x python3-brotli s390x 1.1.0-2build4 [380 kB] 262s Get:202 http://ftpmaster.internal/ubuntu questing/universe s390x python3-contourpy s390x 1.3.1-1build1 [197 kB] 262s Get:203 http://ftpmaster.internal/ubuntu questing/universe s390x python3-cycler all 0.12.1-1 [9716 B] 262s Get:204 http://ftpmaster.internal/ubuntu questing/main s390x python3-decorator all 5.2.1-2 [28.1 kB] 262s Get:205 http://ftpmaster.internal/ubuntu questing/main s390x python3-defusedxml all 0.7.1-3 [42.2 kB] 262s Get:206 http://ftpmaster.internal/ubuntu questing/main s390x python3-roman all 5.0-1 [10.3 kB] 262s Get:207 http://ftpmaster.internal/ubuntu questing/main s390x python3-docutils all 0.21.2+dfsg-2 [409 kB] 262s Get:208 http://ftpmaster.internal/ubuntu questing/main s390x python3-platformdirs all 4.3.7-1 [16.9 kB] 262s Get:209 http://ftpmaster.internal/ubuntu questing/universe s390x python3-fs all 2.4.16-7 [90.8 kB] 262s Get:210 http://ftpmaster.internal/ubuntu questing/main s390x python3-lxml s390x 5.4.0-1build1 [1409 kB] 262s Get:211 http://ftpmaster.internal/ubuntu questing/universe s390x python3-lz4 s390x 4.4.0+dfsg-2 [26.6 kB] 262s Get:212 http://ftpmaster.internal/ubuntu questing/universe s390x python3-scipy s390x 1.15.3-1 [17.2 MB] 263s Get:213 http://ftpmaster.internal/ubuntu questing/universe s390x python3-mpmath all 1.3.0-1 [425 kB] 263s Get:214 http://ftpmaster.internal/ubuntu questing/universe s390x python3-sympy all 1.13.3-5 [4229 kB] 263s Get:215 http://ftpmaster.internal/ubuntu questing/universe s390x python3-ufolib2 all 0.17.1+dfsg1-1 [33.5 kB] 263s Get:216 http://ftpmaster.internal/ubuntu questing/universe s390x unicode-data all 15.1.0-1 [8878 kB] 263s Get:217 http://ftpmaster.internal/ubuntu questing/universe s390x python3-fonttools s390x 4.55.3-2build1 [1496 kB] 263s Get:218 http://ftpmaster.internal/ubuntu questing/main s390x python3-imagesize all 1.4.1-1 [6844 B] 263s Get:219 http://ftpmaster.internal/ubuntu questing/universe s390x python3-kiwisolver s390x 1.4.7-3build1 [55.0 kB] 263s Get:220 http://ftpmaster.internal/ubuntu questing/universe s390x python3-matplotlib s390x 3.10.1+dfsg1-4 [18.0 MB] 263s Get:221 http://ftpmaster.internal/ubuntu questing/main s390x python3-msgpack s390x 1.0.3-3build4 [87.7 kB] 263s Get:222 http://ftpmaster.internal/ubuntu questing/universe s390x python3-mmtf all 1.1.3-1 [16.2 kB] 264s Get:223 http://ftpmaster.internal/ubuntu questing/main s390x python3-mysqldb s390x 1.4.6-2build6 [48.4 kB] 264s Get:224 http://ftpmaster.internal/ubuntu questing/main s390x python3-networkx all 3.2.1-4ubuntu1 [11.5 MB] 264s Get:225 http://ftpmaster.internal/ubuntu questing/main s390x sphinx-common all 8.2.3-1ubuntu2 [656 kB] 264s Get:226 http://ftpmaster.internal/ubuntu questing/main s390x python3-alabaster all 0.7.16-0.1 [18.5 kB] 264s Get:227 http://ftpmaster.internal/ubuntu questing/main s390x python3-snowballstemmer all 2.2.0-4build1 [59.8 kB] 264s Get:228 http://ftpmaster.internal/ubuntu questing/main s390x python3-sphinx all 8.2.3-1ubuntu2 [482 kB] 264s Get:229 http://ftpmaster.internal/ubuntu questing/main s390x python3-tabulate all 0.9.0-1 [45.3 kB] 264s Get:230 http://ftpmaster.internal/ubuntu questing/universe s390x python3-numpydoc all 1.8.0-2 [52.4 kB] 264s Get:231 http://ftpmaster.internal/ubuntu questing/universe s390x python3-rdflib all 7.1.1-3 [427 kB] 264s Get:232 http://ftpmaster.internal/ubuntu questing/main s390x sphinx-rtd-theme-common all 3.0.2+dfsg-3 [1013 kB] 264s Get:233 http://ftpmaster.internal/ubuntu questing/universe s390x python3-sphinxcontrib.jquery all 4.1-5 [6678 B] 264s Get:234 http://ftpmaster.internal/ubuntu questing/universe s390x python3-sphinx-rtd-theme all 3.0.2+dfsg-3 [23.5 kB] 264s Get:235 http://ftpmaster.internal/ubuntu questing/universe s390x python3-texttable all 1.7.0-1 [11.2 kB] 264s Get:236 http://ftpmaster.internal/ubuntu questing/universe s390x t-coffee s390x 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 [945 kB] 264s Get:237 http://ftpmaster.internal/ubuntu questing/universe s390x texlive-fonts-recommended all 2024.20250309-1 [4974 kB] 264s Get:238 http://ftpmaster.internal/ubuntu questing/universe s390x texlive-latex-base all 2024.20250309-1 [1276 kB] 264s Get:239 http://ftpmaster.internal/ubuntu questing/universe s390x libfontbox-java all 1:1.8.16-5 [208 kB] 264s Get:240 http://ftpmaster.internal/ubuntu questing/universe s390x libpdfbox-java all 1:1.8.16-5 [5521 kB] 264s Get:241 http://ftpmaster.internal/ubuntu questing/universe s390x texlive-latex-recommended all 2024.20250309-1 [8727 kB] 264s Get:242 http://ftpmaster.internal/ubuntu questing/universe s390x texlive-pictures all 2024.20250309-1 [17.0 MB] 265s Get:243 http://ftpmaster.internal/ubuntu questing/universe s390x texlive-latex-extra all 2024.20250309-2 [24.8 MB] 265s Get:244 http://ftpmaster.internal/ubuntu questing/universe s390x wise-data all 2.4.1-27 [83.2 kB] 265s Get:245 http://ftpmaster.internal/ubuntu questing/universe s390x wise s390x 2.4.1-27 [924 kB] 265s Get:246 http://ftpmaster.internal/ubuntu questing/universe s390x fasttree s390x 2.1.11-2 [190 kB] 265s Get:247 http://ftpmaster.internal/ubuntu questing/universe s390x python3-igraph s390x 0.11.8+ds-1build1 [340 kB] 266s Preconfiguring packages ... 266s Fetched 336 MB in 9s (38.3 MB/s) 266s Selecting previously unselected package m4. 266s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 86057 files and directories currently installed.) 266s Preparing to unpack .../000-m4_1.4.19-8_s390x.deb ... 266s Unpacking m4 (1.4.19-8) ... 266s Selecting previously unselected package flex. 266s Preparing to unpack .../001-flex_2.6.4-8.2build1_s390x.deb ... 266s Unpacking flex (2.6.4-8.2build1) ... 266s Selecting previously unselected package fonts-lato. 266s Preparing to unpack .../002-fonts-lato_2.015-1_all.deb ... 266s Unpacking fonts-lato (2.015-1) ... 267s Selecting previously unselected package libgomp1:s390x. 267s Preparing to unpack .../003-libgomp1_15.1.0-8ubuntu1_s390x.deb ... 267s Unpacking libgomp1:s390x (15.1.0-8ubuntu1) ... 267s Selecting previously unselected package libfftw3-double3:s390x. 267s Preparing to unpack .../004-libfftw3-double3_3.3.10-2fakesync1build1_s390x.deb ... 267s Unpacking libfftw3-double3:s390x (3.3.10-2fakesync1build1) ... 267s Selecting previously unselected package libfreetype6:s390x. 267s Preparing to unpack .../005-libfreetype6_2.13.3+dfsg-1_s390x.deb ... 267s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ... 267s Selecting previously unselected package fonts-dejavu-mono. 267s Preparing to unpack .../006-fonts-dejavu-mono_2.37-8_all.deb ... 267s Unpacking fonts-dejavu-mono (2.37-8) ... 267s Selecting previously unselected package fonts-dejavu-core. 267s Preparing to unpack .../007-fonts-dejavu-core_2.37-8_all.deb ... 267s Unpacking fonts-dejavu-core (2.37-8) ... 267s Selecting previously unselected package libfontenc1:s390x. 267s Preparing to unpack .../008-libfontenc1_1%3a1.1.8-1build1_s390x.deb ... 267s Unpacking libfontenc1:s390x (1:1.1.8-1build1) ... 267s Selecting previously unselected package x11-common. 267s Preparing to unpack .../009-x11-common_1%3a7.7+24ubuntu1_all.deb ... 267s Unpacking x11-common (1:7.7+24ubuntu1) ... 267s Selecting previously unselected package xfonts-encodings. 267s Preparing to unpack .../010-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ... 267s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ... 267s Selecting previously unselected package xfonts-utils. 267s Preparing to unpack .../011-xfonts-utils_1%3a7.7+7_s390x.deb ... 267s Unpacking xfonts-utils (1:7.7+7) ... 267s Selecting previously unselected package fonts-urw-base35. 267s Preparing to unpack .../012-fonts-urw-base35_20200910-8_all.deb ... 267s Unpacking fonts-urw-base35 (20200910-8) ... 267s Selecting previously unselected package fontconfig-config. 267s Preparing to unpack .../013-fontconfig-config_2.15.0-2.3ubuntu1_s390x.deb ... 267s Unpacking fontconfig-config (2.15.0-2.3ubuntu1) ... 267s Selecting previously unselected package libfontconfig1:s390x. 267s Preparing to unpack .../014-libfontconfig1_2.15.0-2.3ubuntu1_s390x.deb ... 267s Unpacking libfontconfig1:s390x (2.15.0-2.3ubuntu1) ... 267s Selecting previously unselected package libsharpyuv0:s390x. 267s Preparing to unpack .../015-libsharpyuv0_1.5.0-0.1_s390x.deb ... 267s Unpacking libsharpyuv0:s390x (1.5.0-0.1) ... 267s Selecting previously unselected package libaom3:s390x. 267s Preparing to unpack .../016-libaom3_3.12.1-1_s390x.deb ... 267s Unpacking libaom3:s390x (3.12.1-1) ... 267s Selecting previously unselected package libheif-plugin-aomdec:s390x. 267s Preparing to unpack .../017-libheif-plugin-aomdec_1.19.8-1_s390x.deb ... 267s Unpacking libheif-plugin-aomdec:s390x (1.19.8-1) ... 267s Selecting previously unselected package libde265-0:s390x. 267s Preparing to unpack .../018-libde265-0_1.0.16-1_s390x.deb ... 267s Unpacking libde265-0:s390x (1.0.16-1) ... 267s Selecting previously unselected package libheif-plugin-libde265:s390x. 267s Preparing to unpack .../019-libheif-plugin-libde265_1.19.8-1_s390x.deb ... 267s Unpacking libheif-plugin-libde265:s390x (1.19.8-1) ... 267s Selecting previously unselected package libheif1:s390x. 267s Preparing to unpack .../020-libheif1_1.19.8-1_s390x.deb ... 267s Unpacking libheif1:s390x (1.19.8-1) ... 267s Selecting previously unselected package libjbig0:s390x. 267s Preparing to unpack .../021-libjbig0_2.1-6.1ubuntu2_s390x.deb ... 267s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ... 267s Selecting previously unselected package libjpeg-turbo8:s390x. 267s Preparing to unpack .../022-libjpeg-turbo8_2.1.5-3ubuntu2_s390x.deb ... 267s Unpacking libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ... 267s Selecting previously unselected package libjpeg8:s390x. 267s Preparing to unpack .../023-libjpeg8_8c-2ubuntu11_s390x.deb ... 267s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 267s Selecting previously unselected package liblcms2-2:s390x. 267s Preparing to unpack .../024-liblcms2-2_2.16-2_s390x.deb ... 267s Unpacking liblcms2-2:s390x (2.16-2) ... 267s Selecting previously unselected package liblqr-1-0:s390x. 267s Preparing to unpack .../025-liblqr-1-0_0.4.2-2.1build2_s390x.deb ... 267s Unpacking liblqr-1-0:s390x (0.4.2-2.1build2) ... 267s Selecting previously unselected package libltdl7:s390x. 267s Preparing to unpack .../026-libltdl7_2.5.4-4_s390x.deb ... 267s Unpacking libltdl7:s390x (2.5.4-4) ... 267s Selecting previously unselected package libopenjp2-7:s390x. 267s Preparing to unpack .../027-libopenjp2-7_2.5.3-2_s390x.deb ... 267s Unpacking libopenjp2-7:s390x (2.5.3-2) ... 267s Selecting previously unselected package libraw23t64:s390x. 267s Preparing to unpack .../028-libraw23t64_0.21.4-2_s390x.deb ... 267s Unpacking libraw23t64:s390x (0.21.4-2) ... 267s Selecting previously unselected package libdeflate0:s390x. 267s Preparing to unpack .../029-libdeflate0_1.23-2_s390x.deb ... 267s Unpacking libdeflate0:s390x (1.23-2) ... 267s Selecting previously unselected package libwebp7:s390x. 267s Preparing to unpack .../030-libwebp7_1.5.0-0.1_s390x.deb ... 267s Unpacking libwebp7:s390x (1.5.0-0.1) ... 267s Selecting previously unselected package libtiff6:s390x. 267s Preparing to unpack .../031-libtiff6_4.7.0-3ubuntu1_s390x.deb ... 267s Unpacking libtiff6:s390x (4.7.0-3ubuntu1) ... 267s Selecting previously unselected package libwebpdemux2:s390x. 267s Preparing to unpack .../032-libwebpdemux2_1.5.0-0.1_s390x.deb ... 267s Unpacking libwebpdemux2:s390x (1.5.0-0.1) ... 267s Selecting previously unselected package libwebpmux3:s390x. 267s Preparing to unpack .../033-libwebpmux3_1.5.0-0.1_s390x.deb ... 267s Unpacking libwebpmux3:s390x (1.5.0-0.1) ... 267s Selecting previously unselected package imagemagick-7-common. 267s Preparing to unpack .../034-imagemagick-7-common_8%3a7.1.1.43+dfsg1-1ubuntu1_all.deb ... 267s Unpacking imagemagick-7-common (8:7.1.1.43+dfsg1-1ubuntu1) ... 267s Selecting previously unselected package libmagickcore-7.q16-10:s390x. 267s Preparing to unpack .../035-libmagickcore-7.q16-10_8%3a7.1.1.43+dfsg1-1ubuntu1_s390x.deb ... 267s Unpacking libmagickcore-7.q16-10:s390x (8:7.1.1.43+dfsg1-1ubuntu1) ... 267s Selecting previously unselected package libmagickwand-7.q16-10:s390x. 267s Preparing to unpack .../036-libmagickwand-7.q16-10_8%3a7.1.1.43+dfsg1-1ubuntu1_s390x.deb ... 267s Unpacking libmagickwand-7.q16-10:s390x (8:7.1.1.43+dfsg1-1ubuntu1) ... 267s Selecting previously unselected package poppler-data. 267s Preparing to unpack .../037-poppler-data_0.4.12-1_all.deb ... 267s Unpacking poppler-data (0.4.12-1) ... 267s Selecting previously unselected package python3-numpy-dev:s390x. 267s Preparing to unpack .../038-python3-numpy-dev_1%3a2.2.4+ds-1ubuntu1_s390x.deb ... 267s Unpacking python3-numpy-dev:s390x (1:2.2.4+ds-1ubuntu1) ... 267s Selecting previously unselected package libblas3:s390x. 267s Preparing to unpack .../039-libblas3_3.12.1-2build1_s390x.deb ... 267s Unpacking libblas3:s390x (3.12.1-2build1) ... 267s Selecting previously unselected package libgfortran5:s390x. 267s Preparing to unpack .../040-libgfortran5_15.1.0-8ubuntu1_s390x.deb ... 267s Unpacking libgfortran5:s390x (15.1.0-8ubuntu1) ... 267s Selecting previously unselected package liblapack3:s390x. 267s Preparing to unpack .../041-liblapack3_3.12.1-2build1_s390x.deb ... 267s Unpacking liblapack3:s390x (3.12.1-2build1) ... 268s Selecting previously unselected package python3-numpy. 268s Preparing to unpack .../042-python3-numpy_1%3a2.2.4+ds-1ubuntu1_s390x.deb ... 268s Unpacking python3-numpy (1:2.2.4+ds-1ubuntu1) ... 268s Selecting previously unselected package autoconf. 268s Preparing to unpack .../043-autoconf_2.72-3.1ubuntu1_all.deb ... 268s Unpacking autoconf (2.72-3.1ubuntu1) ... 268s Selecting previously unselected package autotools-dev. 268s Preparing to unpack .../044-autotools-dev_20240727.1_all.deb ... 268s Unpacking autotools-dev (20240727.1) ... 268s Selecting previously unselected package automake. 268s Preparing to unpack .../045-automake_1%3a1.17-4ubuntu1_all.deb ... 268s Unpacking automake (1:1.17-4ubuntu1) ... 268s Selecting previously unselected package autopoint. 268s Preparing to unpack .../046-autopoint_0.23.1-2build1_all.deb ... 268s Unpacking autopoint (0.23.1-2build1) ... 268s Selecting previously unselected package libtcl8.6:s390x. 268s Preparing to unpack .../047-libtcl8.6_8.6.16+dfsg-1_s390x.deb ... 268s Unpacking libtcl8.6:s390x (8.6.16+dfsg-1) ... 268s Selecting previously unselected package libxrender1:s390x. 268s Preparing to unpack .../048-libxrender1_1%3a0.9.12-1_s390x.deb ... 268s Unpacking libxrender1:s390x (1:0.9.12-1) ... 268s Selecting previously unselected package libxft2:s390x. 268s Preparing to unpack .../049-libxft2_2.3.6-1build1_s390x.deb ... 268s Unpacking libxft2:s390x (2.3.6-1build1) ... 268s Selecting previously unselected package libxss1:s390x. 268s Preparing to unpack .../050-libxss1_1%3a1.2.3-1build3_s390x.deb ... 268s Unpacking libxss1:s390x (1:1.2.3-1build3) ... 268s Selecting previously unselected package libtk8.6:s390x. 268s Preparing to unpack .../051-libtk8.6_8.6.16-1_s390x.deb ... 268s Unpacking libtk8.6:s390x (8.6.16-1) ... 268s Selecting previously unselected package tk8.6-blt2.5. 268s Preparing to unpack .../052-tk8.6-blt2.5_2.5.3+dfsg-8_s390x.deb ... 268s Unpacking tk8.6-blt2.5 (2.5.3+dfsg-8) ... 268s Selecting previously unselected package blt. 268s Preparing to unpack .../053-blt_2.5.3+dfsg-8_s390x.deb ... 268s Unpacking blt (2.5.3+dfsg-8) ... 268s Selecting previously unselected package libisl23:s390x. 268s Preparing to unpack .../054-libisl23_0.27-1_s390x.deb ... 268s Unpacking libisl23:s390x (0.27-1) ... 268s Selecting previously unselected package libmpc3:s390x. 268s Preparing to unpack .../055-libmpc3_1.3.1-1build2_s390x.deb ... 268s Unpacking libmpc3:s390x (1.3.1-1build2) ... 268s Selecting previously unselected package cpp-14-s390x-linux-gnu. 268s Preparing to unpack .../056-cpp-14-s390x-linux-gnu_14.3.0-1ubuntu1_s390x.deb ... 268s Unpacking cpp-14-s390x-linux-gnu (14.3.0-1ubuntu1) ... 268s Selecting previously unselected package cpp-14. 268s Preparing to unpack .../057-cpp-14_14.3.0-1ubuntu1_s390x.deb ... 268s Unpacking cpp-14 (14.3.0-1ubuntu1) ... 268s Selecting previously unselected package cpp-s390x-linux-gnu. 268s Preparing to unpack .../058-cpp-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ... 268s Unpacking cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 268s Selecting previously unselected package cpp. 268s Preparing to unpack .../059-cpp_4%3a14.2.0-1ubuntu1_s390x.deb ... 268s Unpacking cpp (4:14.2.0-1ubuntu1) ... 268s Selecting previously unselected package libcc1-0:s390x. 268s Preparing to unpack .../060-libcc1-0_15.1.0-8ubuntu1_s390x.deb ... 268s Unpacking libcc1-0:s390x (15.1.0-8ubuntu1) ... 268s Selecting previously unselected package libitm1:s390x. 268s Preparing to unpack .../061-libitm1_15.1.0-8ubuntu1_s390x.deb ... 268s Unpacking libitm1:s390x (15.1.0-8ubuntu1) ... 268s Selecting previously unselected package libasan8:s390x. 268s Preparing to unpack .../062-libasan8_15.1.0-8ubuntu1_s390x.deb ... 268s Unpacking libasan8:s390x (15.1.0-8ubuntu1) ... 268s Selecting previously unselected package libubsan1:s390x. 268s Preparing to unpack .../063-libubsan1_15.1.0-8ubuntu1_s390x.deb ... 268s Unpacking libubsan1:s390x (15.1.0-8ubuntu1) ... 268s Selecting previously unselected package libgcc-14-dev:s390x. 268s Preparing to unpack .../064-libgcc-14-dev_14.3.0-1ubuntu1_s390x.deb ... 268s Unpacking libgcc-14-dev:s390x (14.3.0-1ubuntu1) ... 268s Selecting previously unselected package gcc-14-s390x-linux-gnu. 268s Preparing to unpack .../065-gcc-14-s390x-linux-gnu_14.3.0-1ubuntu1_s390x.deb ... 268s Unpacking gcc-14-s390x-linux-gnu (14.3.0-1ubuntu1) ... 268s Selecting previously unselected package gcc-14. 268s Preparing to unpack .../066-gcc-14_14.3.0-1ubuntu1_s390x.deb ... 268s Unpacking gcc-14 (14.3.0-1ubuntu1) ... 268s Selecting previously unselected package gcc-s390x-linux-gnu. 268s Preparing to unpack .../067-gcc-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ... 268s Unpacking gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 268s Selecting previously unselected package gcc. 269s Preparing to unpack .../068-gcc_4%3a14.2.0-1ubuntu1_s390x.deb ... 269s Unpacking gcc (4:14.2.0-1ubuntu1) ... 269s Selecting previously unselected package libstdc++-14-dev:s390x. 269s Preparing to unpack .../069-libstdc++-14-dev_14.3.0-1ubuntu1_s390x.deb ... 269s Unpacking libstdc++-14-dev:s390x (14.3.0-1ubuntu1) ... 269s Selecting previously unselected package g++-14-s390x-linux-gnu. 269s Preparing to unpack .../070-g++-14-s390x-linux-gnu_14.3.0-1ubuntu1_s390x.deb ... 269s Unpacking g++-14-s390x-linux-gnu (14.3.0-1ubuntu1) ... 269s Selecting previously unselected package g++-14. 269s Preparing to unpack .../071-g++-14_14.3.0-1ubuntu1_s390x.deb ... 269s Unpacking g++-14 (14.3.0-1ubuntu1) ... 269s Selecting previously unselected package g++-s390x-linux-gnu. 269s Preparing to unpack .../072-g++-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ... 269s Unpacking g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 269s Selecting previously unselected package g++. 269s Preparing to unpack .../073-g++_4%3a14.2.0-1ubuntu1_s390x.deb ... 269s Unpacking g++ (4:14.2.0-1ubuntu1) ... 269s Selecting previously unselected package build-essential. 269s Preparing to unpack .../074-build-essential_12.12ubuntu1_s390x.deb ... 269s Unpacking build-essential (12.12ubuntu1) ... 269s Selecting previously unselected package bwa. 269s Preparing to unpack .../075-bwa_0.7.18-1_s390x.deb ... 269s Unpacking bwa (0.7.18-1) ... 269s Selecting previously unselected package libargtable2-0:s390x. 269s Preparing to unpack .../076-libargtable2-0_13-4_s390x.deb ... 269s Unpacking libargtable2-0:s390x (13-4) ... 269s Selecting previously unselected package clustalo. 269s Preparing to unpack .../077-clustalo_1.2.4-8build1_s390x.deb ... 269s Unpacking clustalo (1.2.4-8build1) ... 269s Selecting previously unselected package libdebhelper-perl. 269s Preparing to unpack .../078-libdebhelper-perl_13.24.2ubuntu1_all.deb ... 269s Unpacking libdebhelper-perl (13.24.2ubuntu1) ... 269s Selecting previously unselected package libtool. 269s Preparing to unpack .../079-libtool_2.5.4-4_all.deb ... 269s Unpacking libtool (2.5.4-4) ... 269s Selecting previously unselected package dh-autoreconf. 269s Preparing to unpack .../080-dh-autoreconf_20_all.deb ... 269s Unpacking dh-autoreconf (20) ... 269s Selecting previously unselected package libarchive-zip-perl. 269s Preparing to unpack .../081-libarchive-zip-perl_1.68-1_all.deb ... 269s Unpacking libarchive-zip-perl (1.68-1) ... 269s Selecting previously unselected package libfile-stripnondeterminism-perl. 269s Preparing to unpack .../082-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... 269s Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... 269s Selecting previously unselected package dh-strip-nondeterminism. 269s Preparing to unpack .../083-dh-strip-nondeterminism_1.14.1-2_all.deb ... 269s Unpacking dh-strip-nondeterminism (1.14.1-2) ... 269s Selecting previously unselected package debugedit. 269s Preparing to unpack .../084-debugedit_1%3a5.1-2_s390x.deb ... 269s Unpacking debugedit (1:5.1-2) ... 269s Selecting previously unselected package dwz. 269s Preparing to unpack .../085-dwz_0.15-1build6_s390x.deb ... 269s Unpacking dwz (0.15-1build6) ... 269s Selecting previously unselected package gettext. 269s Preparing to unpack .../086-gettext_0.23.1-2build1_s390x.deb ... 269s Unpacking gettext (0.23.1-2build1) ... 269s Selecting previously unselected package intltool-debian. 269s Preparing to unpack .../087-intltool-debian_0.35.0+20060710.6_all.deb ... 269s Unpacking intltool-debian (0.35.0+20060710.6) ... 269s Selecting previously unselected package po-debconf. 269s Preparing to unpack .../088-po-debconf_1.0.21+nmu1_all.deb ... 269s Unpacking po-debconf (1.0.21+nmu1) ... 269s Selecting previously unselected package debhelper. 269s Preparing to unpack .../089-debhelper_13.24.2ubuntu1_all.deb ... 269s Unpacking debhelper (13.24.2ubuntu1) ... 269s Selecting previously unselected package dh-python. 269s Preparing to unpack .../090-dh-python_6.20250414_all.deb ... 269s Unpacking dh-python (6.20250414) ... 269s Selecting previously unselected package dialign. 269s Preparing to unpack .../091-dialign_2.2.1-13_s390x.deb ... 269s Unpacking dialign (2.2.1-13) ... 269s Selecting previously unselected package sgml-base. 269s Preparing to unpack .../092-sgml-base_1.31+nmu1_all.deb ... 269s Unpacking sgml-base (1.31+nmu1) ... 269s Selecting previously unselected package xml-core. 269s Preparing to unpack .../093-xml-core_0.19_all.deb ... 269s Unpacking xml-core (0.19) ... 269s Selecting previously unselected package docutils-common. 269s Preparing to unpack .../094-docutils-common_0.21.2+dfsg-2_all.deb ... 269s Unpacking docutils-common (0.21.2+dfsg-2) ... 269s Selecting previously unselected package libcifpp-data. 269s Preparing to unpack .../095-libcifpp-data_7.0.9-1_all.deb ... 269s Unpacking libcifpp-data (7.0.9-1) ... 269s Selecting previously unselected package libcifpp7:s390x. 269s Preparing to unpack .../096-libcifpp7_7.0.9-1_s390x.deb ... 269s Unpacking libcifpp7:s390x (7.0.9-1) ... 269s Selecting previously unselected package dssp. 269s Preparing to unpack .../097-dssp_4.4.10-1_s390x.deb ... 269s Unpacking dssp (4.4.10-1) ... 269s Selecting previously unselected package fonts-font-awesome. 269s Preparing to unpack .../098-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 269s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 269s Selecting previously unselected package fonts-lmodern. 269s Preparing to unpack .../099-fonts-lmodern_2.005-1_all.deb ... 269s Unpacking fonts-lmodern (2.005-1) ... 269s Selecting previously unselected package fonts-lyx. 269s Preparing to unpack .../100-fonts-lyx_2.4.3-1_all.deb ... 269s Unpacking fonts-lyx (2.4.3-1) ... 269s Selecting previously unselected package libgs-common. 269s Preparing to unpack .../101-libgs-common_10.05.0dfsg1-0ubuntu1_all.deb ... 269s Unpacking libgs-common (10.05.0dfsg1-0ubuntu1) ... 270s Selecting previously unselected package libgs10-common. 270s Preparing to unpack .../102-libgs10-common_10.05.0dfsg1-0ubuntu1_all.deb ... 270s Unpacking libgs10-common (10.05.0dfsg1-0ubuntu1) ... 270s Selecting previously unselected package libavahi-common-data:s390x. 270s Preparing to unpack .../103-libavahi-common-data_0.8-16ubuntu2_s390x.deb ... 270s Unpacking libavahi-common-data:s390x (0.8-16ubuntu2) ... 270s Selecting previously unselected package libavahi-common3:s390x. 270s Preparing to unpack .../104-libavahi-common3_0.8-16ubuntu2_s390x.deb ... 270s Unpacking libavahi-common3:s390x (0.8-16ubuntu2) ... 270s Selecting previously unselected package libavahi-client3:s390x. 270s Preparing to unpack .../105-libavahi-client3_0.8-16ubuntu2_s390x.deb ... 270s Unpacking libavahi-client3:s390x (0.8-16ubuntu2) ... 270s Selecting previously unselected package libcups2t64:s390x. 270s Preparing to unpack .../106-libcups2t64_2.4.12-0ubuntu1_s390x.deb ... 270s Unpacking libcups2t64:s390x (2.4.12-0ubuntu1) ... 270s Selecting previously unselected package libidn12:s390x. 270s Preparing to unpack .../107-libidn12_1.43-1_s390x.deb ... 270s Unpacking libidn12:s390x (1.43-1) ... 270s Selecting previously unselected package libijs-0.35:s390x. 270s Preparing to unpack .../108-libijs-0.35_0.35-15.3_s390x.deb ... 270s Unpacking libijs-0.35:s390x (0.35-15.3) ... 270s Selecting previously unselected package libjbig2dec0:s390x. 270s Preparing to unpack .../109-libjbig2dec0_0.20-1build3_s390x.deb ... 270s Unpacking libjbig2dec0:s390x (0.20-1build3) ... 270s Selecting previously unselected package libpaper2:s390x. 270s Preparing to unpack .../110-libpaper2_2.2.5-0.3_s390x.deb ... 270s Unpacking libpaper2:s390x (2.2.5-0.3) ... 270s Selecting previously unselected package libice6:s390x. 270s Preparing to unpack .../111-libice6_2%3a1.1.1-1_s390x.deb ... 270s Unpacking libice6:s390x (2:1.1.1-1) ... 270s Selecting previously unselected package libsm6:s390x. 270s Preparing to unpack .../112-libsm6_2%3a1.2.6-1_s390x.deb ... 270s Unpacking libsm6:s390x (2:1.2.6-1) ... 270s Selecting previously unselected package libxt6t64:s390x. 270s Preparing to unpack .../113-libxt6t64_1%3a1.2.1-1.2build1_s390x.deb ... 270s Unpacking libxt6t64:s390x (1:1.2.1-1.2build1) ... 270s Selecting previously unselected package libgs10:s390x. 270s Preparing to unpack .../114-libgs10_10.05.0dfsg1-0ubuntu1_s390x.deb ... 270s Unpacking libgs10:s390x (10.05.0dfsg1-0ubuntu1) ... 270s Selecting previously unselected package ghostscript. 270s Preparing to unpack .../115-ghostscript_10.05.0dfsg1-0ubuntu1_s390x.deb ... 270s Unpacking ghostscript (10.05.0dfsg1-0ubuntu1) ... 270s Selecting previously unselected package libnetpbm11t64:s390x. 270s Preparing to unpack .../116-libnetpbm11t64_2%3a11.10.02-1build1_s390x.deb ... 270s Unpacking libnetpbm11t64:s390x (2:11.10.02-1build1) ... 270s Selecting previously unselected package netpbm. 270s Preparing to unpack .../117-netpbm_2%3a11.10.02-1build1_s390x.deb ... 270s Unpacking netpbm (2:11.10.02-1build1) ... 270s Selecting previously unselected package tex-common. 270s Preparing to unpack .../118-tex-common_6.19_all.deb ... 270s Unpacking tex-common (6.19) ... 270s Selecting previously unselected package libpaper-utils. 270s Preparing to unpack .../119-libpaper-utils_2.2.5-0.3_s390x.deb ... 270s Unpacking libpaper-utils (2.2.5-0.3) ... 270s Selecting previously unselected package libkpathsea6:s390x. 270s Preparing to unpack .../120-libkpathsea6_2024.20240313.70630+ds-6_s390x.deb ... 270s Unpacking libkpathsea6:s390x (2024.20240313.70630+ds-6) ... 270s Selecting previously unselected package libptexenc1:s390x. 270s Preparing to unpack .../121-libptexenc1_2024.20240313.70630+ds-6_s390x.deb ... 270s Unpacking libptexenc1:s390x (2024.20240313.70630+ds-6) ... 270s Selecting previously unselected package libsynctex2:s390x. 270s Preparing to unpack .../122-libsynctex2_2024.20240313.70630+ds-6_s390x.deb ... 270s Unpacking libsynctex2:s390x (2024.20240313.70630+ds-6) ... 270s Selecting previously unselected package libtexlua53-5:s390x. 270s Preparing to unpack .../123-libtexlua53-5_2024.20240313.70630+ds-6_s390x.deb ... 270s Unpacking libtexlua53-5:s390x (2024.20240313.70630+ds-6) ... 270s Selecting previously unselected package t1utils. 270s Preparing to unpack .../124-t1utils_1.41-4build3_s390x.deb ... 270s Unpacking t1utils (1.41-4build3) ... 270s Selecting previously unselected package libpixman-1-0:s390x. 270s Preparing to unpack .../125-libpixman-1-0_0.44.0-3_s390x.deb ... 270s Unpacking libpixman-1-0:s390x (0.44.0-3) ... 270s Selecting previously unselected package libxcb-render0:s390x. 270s Preparing to unpack .../126-libxcb-render0_1.17.0-2_s390x.deb ... 270s Unpacking libxcb-render0:s390x (1.17.0-2) ... 270s Selecting previously unselected package libxcb-shm0:s390x. 270s Preparing to unpack .../127-libxcb-shm0_1.17.0-2_s390x.deb ... 270s Unpacking libxcb-shm0:s390x (1.17.0-2) ... 270s Selecting previously unselected package libcairo2:s390x. 270s Preparing to unpack .../128-libcairo2_1.18.4-1_s390x.deb ... 270s Unpacking libcairo2:s390x (1.18.4-1) ... 270s Selecting previously unselected package libgraphite2-3:s390x. 270s Preparing to unpack .../129-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ... 270s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 270s Selecting previously unselected package libharfbuzz0b:s390x. 270s Preparing to unpack .../130-libharfbuzz0b_10.2.0-1_s390x.deb ... 270s Unpacking libharfbuzz0b:s390x (10.2.0-1) ... 270s Selecting previously unselected package libmpfi0:s390x. 270s Preparing to unpack .../131-libmpfi0_1.5.4+ds-4_s390x.deb ... 270s Unpacking libmpfi0:s390x (1.5.4+ds-4) ... 270s Selecting previously unselected package libpotrace0:s390x. 270s Preparing to unpack .../132-libpotrace0_1.16-2build1_s390x.deb ... 270s Unpacking libpotrace0:s390x (1.16-2build1) ... 270s Selecting previously unselected package libteckit0:s390x. 270s Preparing to unpack .../133-libteckit0_2.5.12+ds1-1_s390x.deb ... 270s Unpacking libteckit0:s390x (2.5.12+ds1-1) ... 270s Selecting previously unselected package libxmu6:s390x. 270s Preparing to unpack .../134-libxmu6_2%3a1.1.3-3build2_s390x.deb ... 270s Unpacking libxmu6:s390x (2:1.1.3-3build2) ... 270s Selecting previously unselected package libxpm4:s390x. 270s Preparing to unpack .../135-libxpm4_1%3a3.5.17-1build2_s390x.deb ... 270s Unpacking libxpm4:s390x (1:3.5.17-1build2) ... 270s Selecting previously unselected package libxaw7:s390x. 270s Preparing to unpack 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Unpacking texlive-base (2024.20250309-1) ... 272s Selecting previously unselected package hicolor-icon-theme. 272s Preparing to unpack .../142-hicolor-icon-theme_0.18-2_all.deb ... 272s Unpacking hicolor-icon-theme (0.18-2) ... 272s Selecting previously unselected package imagemagick-7.q16. 272s Preparing to unpack .../143-imagemagick-7.q16_8%3a7.1.1.43+dfsg1-1ubuntu1_s390x.deb ... 272s Unpacking imagemagick-7.q16 (8:7.1.1.43+dfsg1-1ubuntu1) ... 272s Selecting previously unselected package imagemagick. 272s Preparing to unpack .../144-imagemagick_8%3a7.1.1.43+dfsg1-1ubuntu1_s390x.deb ... 272s Unpacking imagemagick (8:7.1.1.43+dfsg1-1ubuntu1) ... 272s Selecting previously unselected package hevea. 272s Preparing to unpack .../145-hevea_2.36-2_s390x.deb ... 272s Unpacking hevea (2.36-2) ... 272s Selecting previously unselected package libsuitesparseconfig7:s390x. 272s Preparing to unpack .../146-libsuitesparseconfig7_1%3a7.10.1+dfsg-1_s390x.deb ... 272s Unpacking libsuitesparseconfig7:s390x (1:7.10.1+dfsg-1) ... 272s Selecting previously unselected package libamd3:s390x. 272s Preparing to unpack .../147-libamd3_1%3a7.10.1+dfsg-1_s390x.deb ... 272s Unpacking libamd3:s390x (1:7.10.1+dfsg-1) ... 272s Selecting previously unselected package libapache-pom-java. 272s Preparing to unpack .../148-libapache-pom-java_33-2_all.deb ... 272s Unpacking libapache-pom-java (33-2) ... 272s Selecting previously unselected package libarpack2t64:s390x. 272s Preparing to unpack .../149-libarpack2t64_3.9.1-6_s390x.deb ... 272s Unpacking libarpack2t64:s390x (3.9.1-6) ... 272s Selecting previously unselected package libcolamd3:s390x. 272s Preparing to unpack .../150-libcolamd3_1%3a7.10.1+dfsg-1_s390x.deb ... 272s Unpacking libcolamd3:s390x (1:7.10.1+dfsg-1) ... 272s Selecting previously unselected package libcommons-parent-java. 272s Preparing to unpack .../151-libcommons-parent-java_56-1_all.deb ... 272s Unpacking libcommons-parent-java (56-1) ... 272s Selecting previously unselected package libcommons-logging-java. 272s Preparing to unpack .../152-libcommons-logging-java_1.3.0-1ubuntu1_all.deb ... 272s Unpacking libcommons-logging-java (1.3.0-1ubuntu1) ... 272s Selecting previously unselected package libexpat1-dev:s390x. 272s Preparing to unpack .../153-libexpat1-dev_2.7.1-1_s390x.deb ... 272s Unpacking libexpat1-dev:s390x (2.7.1-1) ... 272s Selecting previously unselected package libglpk40:s390x. 272s Preparing to unpack .../154-libglpk40_5.0-1build2_s390x.deb ... 272s Unpacking libglpk40:s390x (5.0-1build2) ... 272s Selecting previously unselected package libplfit0:s390x. 272s Preparing to unpack .../155-libplfit0_0.9.6+ds-2ubuntu1_s390x.deb ... 272s Unpacking libplfit0:s390x (0.9.6+ds-2ubuntu1) ... 272s Selecting previously unselected package libigraph3t64:s390x. 272s Preparing to unpack .../156-libigraph3t64_0.10.15+ds-3build1_s390x.deb ... 272s Unpacking libigraph3t64:s390x (0.10.15+ds-3build1) ... 272s Selecting previously unselected package libimagequant0:s390x. 272s Preparing to unpack .../157-libimagequant0_2.18.0-1build1_s390x.deb ... 272s Unpacking libimagequant0:s390x (2.18.0-1build1) ... 272s Selecting previously unselected package libjs-jquery. 272s Preparing to unpack .../158-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 272s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 272s Selecting previously unselected package libjs-jquery-ui. 272s Preparing to unpack .../159-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 272s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 272s Selecting previously unselected package libjs-underscore. 272s Preparing to unpack .../160-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 272s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 272s Selecting previously unselected package libjs-sphinxdoc. 272s Preparing to unpack .../161-libjs-sphinxdoc_8.2.3-1ubuntu2_all.deb ... 272s Unpacking libjs-sphinxdoc (8.2.3-1ubuntu2) ... 272s Selecting previously unselected package libjson-perl. 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Preparing to unpack .../172-libqhull-r8.0_2020.2-6build1_s390x.deb ... 272s Unpacking libqhull-r8.0:s390x (2020.2-6build1) ... 272s Selecting previously unselected package libraqm0:s390x. 272s Preparing to unpack .../173-libraqm0_0.10.2-1_s390x.deb ... 272s Unpacking libraqm0:s390x (0.10.2-1) ... 272s Selecting previously unselected package libxslt1.1:s390x. 272s Preparing to unpack .../174-libxslt1.1_1.1.43-0exp1_s390x.deb ... 272s Unpacking libxslt1.1:s390x (1.1.43-0exp1) ... 272s Selecting previously unselected package mafft. 272s Preparing to unpack .../175-mafft_7.505-1_s390x.deb ... 272s Unpacking mafft (7.505-1) ... 272s Selecting previously unselected package ncbi-data. 272s Preparing to unpack .../176-ncbi-data_6.1.20170106+dfsg2-6_all.deb ... 272s Unpacking ncbi-data (6.1.20170106+dfsg2-6) ... 273s Selecting previously unselected package ncbi-blast+. 273s Preparing to unpack .../177-ncbi-blast+_2.16.0+ds-7_s390x.deb ... 273s Unpacking ncbi-blast+ (2.16.0+ds-7) ... 273s Selecting previously unselected package phylip. 273s Preparing to unpack .../178-phylip_1%3a3.697+dfsg-4build1_s390x.deb ... 273s Unpacking phylip (1:3.697+dfsg-4build1) ... 273s Selecting previously unselected package prank. 273s Preparing to unpack .../179-prank_0.0.170427+dfsg-3_s390x.deb ... 273s Unpacking prank (0.0.170427+dfsg-3) ... 273s Selecting previously unselected package preview-latex-style. 273s Preparing to unpack .../180-preview-latex-style_13.2-1.1_all.deb ... 273s Unpacking preview-latex-style (13.2-1.1) ... 273s Selecting previously unselected package probcons. 273s Preparing to unpack .../181-probcons_1.12-14_s390x.deb ... 273s Unpacking probcons (1.12-14) ... 273s Selecting previously unselected package python-biopython-doc. 273s Preparing to unpack .../182-python-biopython-doc_1.85+dfsg-4_all.deb ... 273s Unpacking python-biopython-doc (1.85+dfsg-4) ... 273s Selecting previously unselected package python-matplotlib-data. 273s Preparing to unpack .../183-python-matplotlib-data_3.10.1+dfsg1-4_all.deb ... 273s Unpacking python-matplotlib-data (3.10.1+dfsg1-4) ... 273s Selecting previously unselected package python3-all. 273s Preparing to unpack .../184-python3-all_3.13.5-1_s390x.deb ... 273s Unpacking python3-all (3.13.5-1) ... 273s Selecting previously unselected package python3.13-dev. 273s Preparing to unpack .../185-python3.13-dev_3.13.5-2_s390x.deb ... 273s Unpacking python3.13-dev (3.13.5-2) ... 273s Selecting previously unselected package python3-dev. 273s Preparing to unpack .../186-python3-dev_3.13.5-1_s390x.deb ... 273s Unpacking python3-dev (3.13.5-1) ... 273s Selecting previously unselected package python3-all-dev. 273s Preparing to unpack .../187-python3-all-dev_3.13.5-1_s390x.deb ... 273s Unpacking python3-all-dev (3.13.5-1) ... 273s Selecting previously unselected package python3-charset-normalizer. 273s Preparing to unpack .../188-python3-charset-normalizer_3.4.2-1_s390x.deb ... 273s Unpacking python3-charset-normalizer (3.4.2-1) ... 273s Selecting previously unselected package python3.13-tk. 273s Preparing to unpack .../189-python3.13-tk_3.13.5-2_s390x.deb ... 273s Unpacking python3.13-tk (3.13.5-2) ... 273s Selecting previously unselected package python3-tk:s390x. 273s Preparing to unpack .../190-python3-tk_3.13.4-1_s390x.deb ... 273s Unpacking python3-tk:s390x (3.13.4-1) ... 273s Selecting previously unselected package python3-pil.imagetk:s390x. 273s Preparing to unpack .../191-python3-pil.imagetk_11.1.0-5build1_s390x.deb ... 273s Unpacking python3-pil.imagetk:s390x (11.1.0-5build1) ... 273s Selecting previously unselected package python3-pil:s390x. 273s Preparing to unpack .../192-python3-pil_11.1.0-5build1_s390x.deb ... 273s Unpacking python3-pil:s390x (11.1.0-5build1) ... 273s Selecting previously unselected package python3-cairo. 273s Preparing to unpack .../193-python3-cairo_1.27.0-2_s390x.deb ... 273s Unpacking python3-cairo (1.27.0-2) ... 273s Selecting previously unselected package python3-freetype. 273s Preparing to unpack .../194-python3-freetype_2.5.1-1_all.deb ... 273s Unpacking python3-freetype (2.5.1-1) ... 273s Selecting previously unselected package python3-rlpycairo. 273s Preparing to unpack .../195-python3-rlpycairo_0.3.0-3_all.deb ... 273s Unpacking python3-rlpycairo (0.3.0-3) ... 273s Selecting previously unselected package python3-reportlab. 273s Preparing to unpack .../196-python3-reportlab_4.4.2-1_all.deb ... 273s Unpacking python3-reportlab (4.4.2-1) ... 273s Selecting previously unselected package w3c-sgml-lib. 273s Preparing to unpack .../197-w3c-sgml-lib_1.3-3_all.deb ... 273s Unpacking w3c-sgml-lib (1.3-3) ... 273s Selecting previously unselected package python3-biopython. 273s Preparing to unpack .../198-python3-biopython_1.85+dfsg-4_s390x.deb ... 273s Unpacking python3-biopython (1.85+dfsg-4) ... 274s Selecting previously unselected package python3-biopython-sql. 274s Preparing to unpack .../199-python3-biopython-sql_1.85+dfsg-4_all.deb ... 274s Unpacking python3-biopython-sql (1.85+dfsg-4) ... 274s Selecting previously unselected package python3-brotli. 274s Preparing to unpack .../200-python3-brotli_1.1.0-2build4_s390x.deb ... 274s Unpacking python3-brotli (1.1.0-2build4) ... 274s Selecting previously unselected package python3-contourpy. 274s Preparing to unpack .../201-python3-contourpy_1.3.1-1build1_s390x.deb ... 274s Unpacking python3-contourpy (1.3.1-1build1) ... 274s Selecting previously unselected package python3-cycler. 274s Preparing to unpack .../202-python3-cycler_0.12.1-1_all.deb ... 274s Unpacking python3-cycler (0.12.1-1) ... 274s Selecting previously unselected package python3-decorator. 274s Preparing to unpack .../203-python3-decorator_5.2.1-2_all.deb ... 274s Unpacking python3-decorator (5.2.1-2) ... 274s Selecting previously unselected package python3-defusedxml. 274s Preparing to unpack .../204-python3-defusedxml_0.7.1-3_all.deb ... 274s Unpacking python3-defusedxml (0.7.1-3) ... 274s Selecting previously unselected package python3-roman. 274s Preparing to unpack .../205-python3-roman_5.0-1_all.deb ... 274s Unpacking python3-roman (5.0-1) ... 274s Selecting previously unselected package python3-docutils. 274s Preparing to unpack .../206-python3-docutils_0.21.2+dfsg-2_all.deb ... 274s Unpacking python3-docutils (0.21.2+dfsg-2) ... 274s Selecting previously unselected package python3-platformdirs. 274s Preparing to unpack .../207-python3-platformdirs_4.3.7-1_all.deb ... 274s Unpacking python3-platformdirs (4.3.7-1) ... 274s Selecting previously unselected package python3-fs. 274s Preparing to unpack .../208-python3-fs_2.4.16-7_all.deb ... 274s Unpacking python3-fs (2.4.16-7) ... 274s Selecting previously unselected package python3-lxml:s390x. 274s Preparing to unpack .../209-python3-lxml_5.4.0-1build1_s390x.deb ... 274s Unpacking python3-lxml:s390x (5.4.0-1build1) ... 274s Selecting previously unselected package python3-lz4. 274s 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unselected package python3-mmtf. 275s Preparing to unpack .../221-python3-mmtf_1.1.3-1_all.deb ... 275s Unpacking python3-mmtf (1.1.3-1) ... 275s Selecting previously unselected package python3-mysqldb. 275s Preparing to unpack .../222-python3-mysqldb_1.4.6-2build6_s390x.deb ... 275s Unpacking python3-mysqldb (1.4.6-2build6) ... 275s Selecting previously unselected package python3-networkx. 275s Preparing to unpack .../223-python3-networkx_3.2.1-4ubuntu1_all.deb ... 275s Unpacking python3-networkx (3.2.1-4ubuntu1) ... 275s Selecting previously unselected package sphinx-common. 275s Preparing to unpack .../224-sphinx-common_8.2.3-1ubuntu2_all.deb ... 275s Unpacking sphinx-common (8.2.3-1ubuntu2) ... 275s Selecting previously unselected package python3-alabaster. 275s Preparing to unpack .../225-python3-alabaster_0.7.16-0.1_all.deb ... 275s Unpacking python3-alabaster (0.7.16-0.1) ... 275s Selecting previously unselected package python3-snowballstemmer. 275s Preparing to unpack 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auto mode 282s Setting up libexpat1-dev:s390x (2.7.1-1) ... 282s Setting up libzzip-0-13t64:s390x (0.13.78+dfsg.1-0.1) ... 282s Setting up libfreetype6:s390x (2.13.3+dfsg-1) ... 282s Setting up libjbig2dec0:s390x (0.20-1build3) ... 282s Setting up python3-snowballstemmer (2.2.0-4build1) ... 282s Setting up libteckit0:s390x (2.5.12+ds1-1) ... 282s Setting up python3-brotli (1.1.0-2build4) ... 282s Setting up libapache-pom-java (33-2) ... 282s Setting up libavahi-common-data:s390x (0.8-16ubuntu2) ... 282s Setting up xfonts-encodings (1:1.0.5-0ubuntu2) ... 282s Setting up t1utils (1.41-4build3) ... 282s Setting up python3-cycler (0.12.1-1) ... 283s Setting up libtexlua53-5:s390x (2024.20240313.70630+ds-6) ... 283s Setting up libimagequant0:s390x (2.18.0-1build1) ... 283s Setting up fonts-dejavu-mono (2.37-8) ... 283s Setting up python3-kiwisolver (1.4.7-3build1) ... 283s Setting up libmpc3:s390x (1.3.1-1build2) ... 283s Setting up python3-numpy-dev:s390x (1:2.2.4+ds-1ubuntu1) ... 283s 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libasan8:s390x (15.1.0-8ubuntu1) ... 283s Setting up libjson-perl (4.10000-1) ... 283s Setting up libxslt1.1:s390x (1.1.43-0exp1) ... 283s Setting up debugedit (1:5.1-2) ... 283s Setting up fonts-lmodern (2.005-1) ... 283s Setting up libsuitesparseconfig7:s390x (1:7.10.1+dfsg-1) ... 283s Setting up libopenjp2-7:s390x (2.5.3-2) ... 283s Setting up libharfbuzz0b:s390x (10.2.0-1) ... 283s Setting up fasttree (2.1.11-2) ... 283s Setting up sgml-base (1.31+nmu1) ... 283s Setting up python3-msgpack (1.0.3-3build4) ... 283s Setting up libplfit0:s390x (0.9.6+ds-2ubuntu1) ... 283s Setting up libxss1:s390x (1:1.2.3-1build3) ... 283s Setting up libmbedcrypto16:s390x (3.6.2-3ubuntu1) ... 283s Setting up libpaper2:s390x (2.2.5-0.3) ... 283s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 283s Setting up python3-mpmath (1.3.0-1) ... 284s Setting up libisl23:s390x (0.27-1) ... 284s Setting up libde265-0:s390x (1.0.16-1) ... 284s Setting up python-matplotlib-data (3.10.1+dfsg1-4) ... 284s Setting up libwebpmux3:s390x (1.5.0-0.1) ... 284s Setting up dialign (2.2.1-13) ... 284s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 284s Setting up sphinx-rtd-theme-common (3.0.2+dfsg-3) ... 284s Setting up xdg-utils (1.2.1-2ubuntu1) ... 284s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 284s Setting up libcc1-0:s390x (15.1.0-8ubuntu1) ... 284s Setting up libitm1:s390x (15.1.0-8ubuntu1) ... 284s Setting up libsynctex2:s390x (2024.20240313.70630+ds-6) ... 284s Setting up prank (0.0.170427+dfsg-3) ... 284s Setting up libargtable2-0:s390x (13-4) ... 284s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 284s Setting up python3-imagesize (1.4.1-1) ... 284s Setting up libpotrace0:s390x (1.16-2build1) ... 284s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 284s Setting up automake (1:1.17-4ubuntu1) ... 284s update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode 284s Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... 284s Setting up python3-sympy (1.13.3-5) ... 288s Setting up libice6:s390x (2:1.1.1-1) ... 288s Setting up flex (2.6.4-8.2build1) ... 288s Setting up liblapack3:s390x (3.12.1-2build1) ... 288s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 288s Setting up gettext (0.23.1-2build1) ... 288s Setting up libarpack2t64:s390x (3.9.1-6) ... 288s Setting up libamd3:s390x (1:7.10.1+dfsg-1) ... 288s Setting up libpdfbox-java (1:1.8.16-5) ... 288s Setting up libcolamd3:s390x (1:7.10.1+dfsg-1) ... 288s Setting up fontconfig-config (2.15.0-2.3ubuntu1) ... 288s Setting up wise (2.4.1-27) ... 288s Setting up preview-latex-style (13.2-1.1) ... 288s Setting up libwebpdemux2:s390x (1.5.0-0.1) ... 288s Setting up libcommons-parent-java (56-1) ... 288s Setting up libavahi-common3:s390x (0.8-16ubuntu2) ... 288s Setting up 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libtk8.6:s390x (8.6.16-1) ... 294s Setting up python3-mmtf (1.1.3-1) ... 294s Setting up fonts-urw-base35 (20200910-8) ... 294s Setting up libcairo2:s390x (1.18.4-1) ... 294s Setting up python3.13-tk (3.13.5-2) ... 294s Setting up ncbi-blast+ (2.16.0+ds-7) ... 294s Setting up python3-pil:s390x (11.1.0-5build1) ... 295s Setting up gcc-14-s390x-linux-gnu (14.3.0-1ubuntu1) ... 295s Setting up gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 295s Setting up libpython3-all-dev:s390x (3.13.5-1) ... 295s Setting up sphinx-common (8.2.3-1ubuntu2) ... 295s Setting up python3-dev (3.13.5-1) ... 295s Setting up libxt6t64:s390x (1:1.2.1-1.2build1) ... 295s Setting up g++-14-s390x-linux-gnu (14.3.0-1ubuntu1) ... 295s Setting up netpbm (2:11.10.02-1build1) ... 295s Setting up python3-igraph (0.11.8+ds-1build1) ... 295s Setting up cpp (4:14.2.0-1ubuntu1) ... 295s Setting up libcups2t64:s390x (2.4.12-0ubuntu1) ... 295s Setting up python3-all-dev (3.13.5-1) ... 295s Setting up libgs10-common (10.05.0dfsg1-0ubuntu1) ... 295s Setting up tk8.6-blt2.5 (2.5.3+dfsg-8) ... 295s Setting up libxmu6:s390x (2:1.1.3-3build2) ... 295s Setting up python3-cairo (1.27.0-2) ... 295s Setting up blt (2.5.3+dfsg-8) ... 295s Setting up python3-tk:s390x (3.13.4-1) ... 295s Setting up g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 295s Setting up libxaw7:s390x (2:1.0.16-1) ... 295s Setting up gcc-14 (14.3.0-1ubuntu1) ... 295s Setting up python3-pil.imagetk:s390x (11.1.0-5build1) ... 295s Setting up python3-rlpycairo (0.3.0-3) ... 295s Setting up python3-reportlab (4.4.2-1) ... 296s Setting up texlive-binaries (2024.20240313.70630+ds-6) ... 296s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 296s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 296s Setting up g++-14 (14.3.0-1ubuntu1) ... 296s Setting up texlive-base (2024.20250309-1) ... 297s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 297s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 297s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 298s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 298s Setting up libgs10:s390x (10.05.0dfsg1-0ubuntu1) ... 298s Setting up libtool (2.5.4-4) ... 298s Setting up ghostscript (10.05.0dfsg1-0ubuntu1) ... 298s Setting up gcc (4:14.2.0-1ubuntu1) ... 298s Setting up dh-autoreconf (20) ... 298s Setting up texlive-latex-base (2024.20250309-1) ... 298s Setting up texlive-latex-recommended (2024.20250309-1) ... 298s Setting up texlive-pictures (2024.20250309-1) ... 298s Setting up g++ (4:14.2.0-1ubuntu1) ... 298s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 298s Setting up texlive-fonts-recommended (2024.20250309-1) ... 298s Setting up build-essential (12.12ubuntu1) ... 298s Setting up debhelper (13.24.2ubuntu1) ... 298s Setting up texlive-latex-extra (2024.20250309-2) ... 298s Setting up python3-ufolib2 (0.17.1+dfsg1-1) ... 298s Setting up libheif-plugin-aomdec:s390x (1.19.8-1) ... 298s Setting up libheif-plugin-libde265:s390x (1.19.8-1) ... 298s Setting up libheif1:s390x (1.19.8-1) ... 298s Setting up python3-fonttools (4.55.3-2build1) ... 299s Setting up libmagickcore-7.q16-10:s390x (8:7.1.1.43+dfsg1-1ubuntu1) ... 299s Setting up python3-matplotlib (3.10.1+dfsg1-4) ... 301s Setting up libmagickwand-7.q16-10:s390x (8:7.1.1.43+dfsg1-1ubuntu1) ... 301s Setting up imagemagick-7.q16 (8:7.1.1.43+dfsg1-1ubuntu1) ... 301s update-alternatives: using /usr/bin/compare-im7.q16 to provide /usr/bin/compare (compare) in auto mode 301s update-alternatives: using /usr/bin/compare-im7.q16 to provide /usr/bin/compare-im7 (compare-im7) in auto mode 301s update-alternatives: using /usr/bin/animate-im7.q16 to provide /usr/bin/animate (animate) in auto mode 301s update-alternatives: using /usr/bin/animate-im7.q16 to provide /usr/bin/animate-im7 (animate-im7) in auto mode 301s update-alternatives: using /usr/bin/convert-im7.q16 to provide /usr/bin/convert (convert) in auto mode 301s update-alternatives: using /usr/bin/convert-im7.q16 to provide /usr/bin/convert-im7 (convert-im7) in auto mode 301s update-alternatives: using /usr/bin/composite-im7.q16 to provide /usr/bin/composite (composite) in auto mode 301s update-alternatives: using /usr/bin/composite-im7.q16 to provide /usr/bin/composite-im7 (composite-im7) in auto mode 301s update-alternatives: using /usr/bin/conjure-im7.q16 to provide /usr/bin/conjure (conjure) in auto mode 301s update-alternatives: using /usr/bin/conjure-im7.q16 to provide /usr/bin/conjure-im7 (conjure-im7) in auto mode 301s update-alternatives: using /usr/bin/import-im7.q16 to provide /usr/bin/import (import) in auto mode 301s update-alternatives: using /usr/bin/import-im7.q16 to provide /usr/bin/import-im7 (import-im7) in auto mode 301s update-alternatives: using /usr/bin/identify-im7.q16 to provide /usr/bin/identify (identify) in auto mode 301s update-alternatives: using /usr/bin/identify-im7.q16 to provide /usr/bin/identify-im7 (identify-im7) in auto mode 301s update-alternatives: using /usr/bin/stream-im7.q16 to provide /usr/bin/stream (stream) in auto mode 301s update-alternatives: using /usr/bin/stream-im7.q16 to provide /usr/bin/stream-im7 (stream-im7) in auto mode 301s update-alternatives: using /usr/bin/display-im7.q16 to provide /usr/bin/display (display) in auto mode 301s update-alternatives: using /usr/bin/display-im7.q16 to provide /usr/bin/display-im7 (display-im7) in auto mode 301s update-alternatives: using /usr/bin/montage-im7.q16 to provide /usr/bin/montage (montage) in auto mode 301s update-alternatives: using /usr/bin/montage-im7.q16 to provide /usr/bin/montage-im7 (montage-im7) in auto mode 301s update-alternatives: using /usr/bin/mogrify-im7.q16 to provide /usr/bin/mogrify (mogrify) in auto mode 301s update-alternatives: using /usr/bin/mogrify-im7.q16 to provide /usr/bin/mogrify-im7 (mogrify-im7) in auto mode 301s update-alternatives: using /usr/bin/magick-im7.q16 to provide /usr/bin/magick (magick) in auto mode 301s update-alternatives: warning: skip creation of /usr/share/man/man1/magick.1.gz because associated file /usr/share/man/man1/magick-im7.q16.1.gz (of link group magick) doesn't exist 301s update-alternatives: using /usr/bin/magick-im7.q16 to provide /usr/bin/magick-im7 (magick-im7) in auto mode 301s update-alternatives: warning: skip creation of /usr/share/man/man1/magick-im7.1.gz because associated file /usr/share/man/man1/magick-im7.q16.1.gz (of link group magick-im7) doesn't exist 301s update-alternatives: using /usr/bin/magick-script-im7.q16 to provide /usr/bin/magick-script (magick-script) in auto mode 301s update-alternatives: warning: skip creation of /usr/share/man/man1/magick-script.1.gz because associated file /usr/share/man/man1/magick-script-im7.q16.1.gz (of link group magick-script) doesn't exist 301s update-alternatives: using /usr/bin/magick-script-im7.q16 to provide /usr/bin/magick-script-im7 (magick-script-im7) in auto mode 301s update-alternatives: warning: skip creation of /usr/share/man/man1/magick-script-im7.1.gz because associated file /usr/share/man/man1/magick-script-im7.q16.1.gz (of link group magick-script-im7) doesn't exist 301s Setting up hevea (2.36-2) ... 301s Setting up imagemagick (8:7.1.1.43+dfsg1-1ubuntu1) ... 301s Processing triggers for install-info (7.1.1-1) ... 301s Processing triggers for libc-bin (2.41-6ubuntu2) ... 301s Processing triggers for man-db (2.13.1-1) ... 302s Processing triggers for sgml-base (1.31+nmu1) ... 302s Setting up docutils-common (0.21.2+dfsg-2) ... 302s Setting up w3c-sgml-lib (1.3-3) ... 325s Setting up python3-biopython (1.85+dfsg-4) ... 326s Setting up python3-biopython-sql (1.85+dfsg-4) ... 326s Processing triggers for sgml-base (1.31+nmu1) ... 326s Setting up python3-docutils (0.21.2+dfsg-2) ... 326s Setting up python3-sphinx (8.2.3-1ubuntu2) ... 327s Setting up python3-sphinxcontrib.jquery (4.1-5) ... 327s Setting up python3-numpydoc (1.8.0-2) ... 327s Setting up python3-sphinx-rtd-theme (3.0.2+dfsg-3) ... 327s Processing triggers for tex-common (6.19) ... 327s Running updmap-sys. This may take some time... done. 327s Running mktexlsr /var/lib/texmf ... done. 327s Building format(s) --all. 407s This may take some time... done. 411s autopkgtest [03:47:14]: test full_suite: sh debian/tests/run-unit-test 411s autopkgtest [03:47:14]: test full_suite: [----------------------- 412s mkdir: created directory 'Bio' 412s mkdir: created directory 'Bio/Align' 412s mkdir: created directory 'Bio/Align/substitution_matrices' 412s mkdir: created directory 'Bio/Align/substitution_matrices/data/' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/BENNER22' -> 'Bio/Align/substitution_matrices/data/BENNER22' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/BENNER6' -> 'Bio/Align/substitution_matrices/data/BENNER6' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/BENNER74' -> 'Bio/Align/substitution_matrices/data/BENNER74' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/BLASTN' -> 'Bio/Align/substitution_matrices/data/BLASTN' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/BLASTP' -> 'Bio/Align/substitution_matrices/data/BLASTP' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/BLOSUM45' -> 'Bio/Align/substitution_matrices/data/BLOSUM45' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/BLOSUM50' -> 'Bio/Align/substitution_matrices/data/BLOSUM50' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/BLOSUM62' -> 'Bio/Align/substitution_matrices/data/BLOSUM62' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/BLOSUM80' -> 'Bio/Align/substitution_matrices/data/BLOSUM80' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/BLOSUM90' -> 'Bio/Align/substitution_matrices/data/BLOSUM90' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/DAYHOFF' -> 'Bio/Align/substitution_matrices/data/DAYHOFF' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/FENG' -> 'Bio/Align/substitution_matrices/data/FENG' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/GENETIC' -> 'Bio/Align/substitution_matrices/data/GENETIC' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/GONNET1992' -> 'Bio/Align/substitution_matrices/data/GONNET1992' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/HOXD70' -> 'Bio/Align/substitution_matrices/data/HOXD70' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/JOHNSON' -> 'Bio/Align/substitution_matrices/data/JOHNSON' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/JONES' -> 'Bio/Align/substitution_matrices/data/JONES' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/LEVIN' -> 'Bio/Align/substitution_matrices/data/LEVIN' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/MCLACHLAN' -> 'Bio/Align/substitution_matrices/data/MCLACHLAN' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/MDM78' -> 'Bio/Align/substitution_matrices/data/MDM78' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/MEGABLAST' -> 'Bio/Align/substitution_matrices/data/MEGABLAST' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/NUC.4.4' -> 'Bio/Align/substitution_matrices/data/NUC.4.4' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/PAM250' -> 'Bio/Align/substitution_matrices/data/PAM250' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/PAM30' -> 'Bio/Align/substitution_matrices/data/PAM30' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/PAM70' -> 'Bio/Align/substitution_matrices/data/PAM70' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/RAO' -> 'Bio/Align/substitution_matrices/data/RAO' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/RISLER' -> 'Bio/Align/substitution_matrices/data/RISLER' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/SCHNEIDER' -> 'Bio/Align/substitution_matrices/data/SCHNEIDER' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/STR' -> 'Bio/Align/substitution_matrices/data/STR' 412s '/usr/lib/python3/dist-packages/Bio/Align/substitution_matrices/data/TRANS' -> 'Bio/Align/substitution_matrices/data/TRANS' 412s test_Ace ... ok 413s test_Affy ... ok 414s test_AlignIO ... ok 414s test_AlignIO_ClustalIO ... ok 414s test_AlignIO_EmbossIO ... ok 414s test_AlignIO_FastaIO ... ok 414s test_AlignIO_MauveIO ... ok 414s test_AlignIO_PhylipIO ... ok 415s test_AlignIO_convert ... ok 415s test_AlignInfo ... ok 415s test_Align_Alignment ... ok 415s test_Align_a2m ... ok 415s test_Align_bed ... ok 415s test_Align_bigbed ... ok 415s test_Align_bigmaf ... ok 416s test_Align_bigpsl ... ok 416s test_Align_chain ... ok 416s test_Align_clustal ... ok 421s test_Align_codonalign ... ok 421s test_Align_emboss ... ok 421s test_Align_exonerate ... ok 421s test_Align_fasta ... ok 421s test_Align_hhr ... ok 422s test_Align_maf ... ok 422s test_Align_mauve ... ok 422s test_Align_msf ... ok 422s test_Align_nexus ... ok 422s test_Align_phylip ... ok 422s test_Align_psl ... ok 422s test_Align_sam ... ok 424s test_Align_stockholm ... ok 424s test_Align_tabular ... ok 424s test_Application ... ok 424s test_BioSQL_MySQLdb_online ... skipping. internet not available 424s test_BioSQL_mysql_connector ... skipping. BioSQL test configuration file biosql.ini missing (see biosql.ini.sample) 424s test_BioSQL_mysql_connector_online ... skipping. internet not available 424s test_BioSQL_psycopg2_online ... skipping. internet not available 427s test_BioSQL_sqlite3 ... ok 427s test_BioSQL_sqlite3_online ... skipping. internet not available 427s test_Blast_Record ... ok 428s test_Blast_parser ... ok 428s test_CAPS ... ok 428s test_Chi2 ... ok 430s test_ClustalOmega_tool ... ok 430s test_Clustalw_tool ... skipping. Install clustalw or clustalw2 if you want to use it from Biopython. 430s test_Cluster ... ok 430s test_CodonTable ... ok 430s test_ColorSpiral ... ok 430s test_Compass ... ok 431s test_Consensus ... ok 432s test_Dialign_tool ... ok 432s test_EMBL_unittest ... ok 432s test_Emboss ... skipping. $EMBOSS_ROOT='/usr/lib/emboss' which does not exist! 432s test_EmbossPrimer ... ok 436s test_Entrez ... ok 436s test_Entrez_online ... skipping. internet not available 437s test_Entrez_parser ... ok 437s test_Enzyme ... ok 437s test_ExPASy ... skipping. internet not available 437s test_Fasttree_tool ... ok 437s test_File ... ok 437s test_GenBank ... /usr/lib/python3/dist-packages/Bio/SeqIO/InsdcIO.py:600: BiopythonWarning: Annotation 'Sequence Read Archive: SRX001885, SRX001121, SRX001531, SRX001530, SRX001529' too long 437s warnings.warn(f"Annotation {text!r} too long", BiopythonWarning) 437s ok 438s test_GenomeDiagram ... Warn: Can't find .pfb for face 'Helvetica' 440s ok 441s test_GraphicsChromosome ... ok 441s test_GraphicsDistribution ... ok 441s test_GraphicsGeneral ... ok 442s test_HMMCasino ... ok 442s test_HMMGeneral ... ok 442s test_KEGG ... ok 442s test_KEGG_online ... skipping. internet not available 446s test_KGML_graphics ... ok 446s test_KGML_graphics_online ... skipping. internet not available 446s test_KGML_nographics ... ok 446s test_KeyWList ... ok 447s test_LogisticRegression ... ok 447s test_MafIO_index ... ok 448s test_Mafft_tool ... ok 448s test_MarkovModel ... ok 448s test_Medline ... ok 448s test_Muscle_tool ... skipping. Install MUSCLE if you want to use the Bio.Align.Applications wrapper. 449s test_NCBIXML ... Exception ignored in: 449s Traceback (most recent call last): 449s File "/usr/lib/python3/dist-packages/Bio/Blast/NCBIXML.py", line 1319, in parse 449s expat_parser.Parse(NULL, True) 449s xml.parsers.expat.ExpatError: unclosed token: line 320, column 0 449s ok 450s test_NCBI_BLAST_tools ... ok 450s test_NCBI_qblast ... ok 450s test_NMR ... ok 450s test_NaiveBayes ... ok 450s test_Nexus ... ok 450s test_PAML_baseml ... ok 451s test_PAML_codeml ... ok 451s test_PAML_yn00 ... ok 455s test_PDB_CEAligner ... ok 457s test_PDB_DSSP ... ok 457s test_PDB_Dice ... ok 457s test_PDB_Disordered ... ok 457s test_PDB_Exposure ... ok 457s test_PDB_FragmentMapper ... ok 458s test_PDB_KDTree ... ok 458s test_PDB_MMCIF2Dict ... ok 459s test_PDB_MMCIFIO ... ok 459s test_PDB_MMCIFParser ... ok 459s test_PDB_NACCESS ... ok 460s test_PDB_PDBIO ... ok 460s test_PDB_PDBList ... skipping. internet not available 465s test_PDB_PDBMLParser ... ok 465s test_PDB_PDBParser ... ok 465s test_PDB_PSEA ... skipping. Download and install psea from ftp://ftp.lmcp.jussieu.fr/pub/sincris/software/protein/p-sea/. Make sure that psea is on path 466s test_PDB_Polypeptide ... ok 466s test_PDB_QCPSuperimposer ... ok 469s test_PDB_SASA ... ok 469s test_PDB_SMCRA ... ok 469s test_PDB_Selection ... ok 469s test_PDB_StructureAlignment ... ok 469s test_PDB_Superimposer ... ok 469s test_PDB_alphafold_db ... skipping. internet not available 475s test_PDB_internal_coords ... ok 475s test_PDB_parse_pdb_header ... ok 475s test_PDB_vectors ... ok 475s test_PQR ... ok 476s test_Pathway ... ok 476s test_Phd ... ok 476s test_Phylo ... ok 476s test_PhyloXML ... ok 477s test_Phylo_CDAO ... ok 477s test_Phylo_NeXML ... ok 478s test_Phylo_igraph ... ok 479s test_Phylo_matplotlib ... ok 480s test_Phylo_networkx ... ok 480s test_PopGen_GenePop_nodepend ... ok 481s test_Prank_tool ... ok 481s test_Probcons_tool ... ok 481s test_ProtParam ... ok 482s test_RCSBFormats ... ok 482s test_Restriction ... ok 482s test_SCOP_Astral ... ok 483s test_SCOP_Cla ... ok 483s test_SCOP_Des ... ok 483s test_SCOP_Dom ... ok 483s test_SCOP_Hie ... ok 484s test_SCOP_Raf ... ok 484s test_SCOP_Residues ... ok 484s test_SCOP_Scop ... ok 484s test_SVDSuperimposer ... ok 485s test_SearchIO_blast_tab ... ok 485s test_SearchIO_blast_tab_index ... ok 486s test_SearchIO_blast_xml ... ok 487s test_SearchIO_blast_xml_index ... ok 487s test_SearchIO_blat_psl ... ok 488s test_SearchIO_blat_psl_index ... ok 488s test_SearchIO_exonerate ... ok 488s test_SearchIO_exonerate_text_index ... ok 488s test_SearchIO_exonerate_vulgar_index ... ok 489s test_SearchIO_fasta_m10 ... ok 489s test_SearchIO_fasta_m10_index ... ok 489s test_SearchIO_hhsuite2_text ... ok 490s test_SearchIO_hmmer2_text ... ok 490s test_SearchIO_hmmer2_text_index ... ok 490s test_SearchIO_hmmer3_domtab ... ok 491s test_SearchIO_hmmer3_domtab_index ... ok 491s test_SearchIO_hmmer3_tab ... ok 491s test_SearchIO_hmmer3_tab_index ... ok 491s test_SearchIO_hmmer3_text ... ok 492s test_SearchIO_hmmer3_text_index ... ok 492s test_SearchIO_interproscan_xml ... ok 492s test_SearchIO_model ... ok 493s test_SearchIO_write ... ok 493s test_SeqFeature ... ok 506s test_SeqIO ... ok 506s test_SeqIO_AbiIO ... ok 507s test_SeqIO_FastaIO ... ok 507s test_SeqIO_Gck ... ok 507s test_SeqIO_Gfa ... ok 508s test_SeqIO_Insdc ... ok 508s test_SeqIO_NibIO ... ok 510s test_SeqIO_PdbIO ... ok 510s test_SeqIO_QualityIO ... ok 510s test_SeqIO_SeqXML ... ok 511s test_SeqIO_SffIO ... ok 511s test_SeqIO_SnapGene ... ok 512s test_SeqIO_TwoBitIO ... ok 512s test_SeqIO_UniprotIO ... ok 512s test_SeqIO_Xdna ... ok 513s test_SeqIO_features ... ok 524s test_SeqIO_index ... ok 524s test_SeqIO_online ... skipping. internet not available 524s test_SeqIO_write ... ok 525s test_SeqRecord ... ok 525s test_SeqUtils ... ok 526s test_Seq_objs ... ok 527s test_SwissProt ... ok 529s test_TCoffee_tool ... ok 529s test_TogoWS ... skipping. internet not available 530s test_TreeConstruction ... ok 530s test_UniGene ... ok 530s test_UniProt ... skipping. internet not available 531s test_UniProt_GOA ... ok 531s test_align ... ok 532s test_align_substitution_matrices ... ok 534s test_bgzf ... ok 535s test_cellosaurus ... ok 540s test_codonalign ... ok 540s test_geo ... ok 540s test_kNN ... ok 541s test_motifs ... ok 541s test_motifs_online ... skipping. internet not available 541s test_pairwise2 ... /usr/lib/python3/dist-packages/Bio/pairwise2.py:278: BiopythonDeprecationWarning: Bio.pairwise2 has been deprecated, and we intend to remove it in a future release of Biopython. As an alternative, please consider using Bio.Align.PairwiseAligner as a replacement, and contact the Biopython developers if you still need the Bio.pairwise2 module. 541s warnings.warn( 541s ok 542s test_pairwise2_no_C ... ok 542s test_pairwise_aligner ... ok 543s test_pairwise_alignment_map ... ok 549s test_phenotype ... ok 550s test_phenotype_fit ... ok 550s test_phyml_tool ... skipping. Couldn't find the PhyML software. Install PhyML 3.0 or later if you want to use the Bio.Phylo.Applications wrapper. 550s test_prodoc ... ok 551s test_prosite ... ok 551s test_raxml_tool ... skipping. Install RAxML (binary raxmlHPC) if you want to test the Bio.Phylo.Applications wrapper. 551s test_samtools_tool ... skipping. Install samtools and correctly set the file path to the program if you want to use it from Biopython 551s test_seq ... ok 552s test_translate ... ok 552s ---------------------------------------------------------------------- 552s Ran 216 tests in 139.473 seconds 552s 552s Skipping any tests requiring internet access 552s Python version: 3.13.5 (main, Jun 25 2025, 18:55:22) [GCC 14.3.0] 552s Operating system: posix linux 552s :0: ResourceWarning: unclosed file <_io.TextIOWrapper name='Fasta/protein_lib.fa' mode='rt' encoding='UTF-8'> 552s :0: ResourceWarning: unclosed file <_io.TextIOWrapper name='Fasta/nucleotide_lib.fa' mode='rt' encoding='UTF-8'> 553s autopkgtest [03:49:36]: test full_suite: -----------------------] 553s full_suite PASS 553s autopkgtest [03:49:36]: test full_suite: - - - - - - - - - - results - - - - - - - - - - 554s autopkgtest [03:49:37]: @@@@@@@@@@@@@@@@@@@@ summary 554s dependencies PASS 554s full_suite PASS