0s autopkgtest [20:49:42]: starting date and time: 2025-05-03 20:49:42+0000
  0s autopkgtest [20:49:42]: git checkout: 9986aa8c Merge branch 'skia/fix_network_interface' into 'ubuntu/production'
  0s autopkgtest [20:49:42]: host juju-7f2275-prod-proposed-migration-environment-23; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.9akwt5fh/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:mpich --apt-upgrade nwchem --timeout-short=300 --timeout-copy=20000 --timeout-test=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=mpich/4.3.0-5 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-big-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-23@bos03-s390x-11.secgroup --name adt-questing-s390x-nwchem-20250503-202833-juju-7f2275-prod-proposed-migration-environment-23-053b5f08-4c3e-4095-8dbf-0839cdab47af --image adt/ubuntu-questing-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-23 --net-id=net_prod-proposed-migration-s390x -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/
113s autopkgtest [20:51:35]: testbed dpkg architecture: s390x
113s autopkgtest [20:51:35]: testbed apt version: 3.0.0
114s autopkgtest [20:51:36]: @@@@@@@@@@@@@@@@@@@@ test bed setup
114s autopkgtest [20:51:36]: testbed release detected to be: None
115s autopkgtest [20:51:37]: updating testbed package index (apt update)
115s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB]
115s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease
115s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease
115s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease
115s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [1430 kB]
116s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [33.7 kB]
116s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [149 kB]
116s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main s390x Packages [178 kB]
116s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x Packages [1275 kB]
116s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse s390x Packages [26.2 kB]
116s Fetched 3202 kB in 1s (2868 kB/s)
117s Reading package lists...
117s autopkgtest [20:51:39]: upgrading testbed (apt dist-upgrade and autopurge)
117s Reading package lists...
117s Building dependency tree...
117s Reading state information...
117s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
117s Starting 2 pkgProblemResolver with broken count: 0
117s Done
118s Entering ResolveByKeep
118s 
118s Calculating upgrade...
118s The following packages will be upgraded:
118s   cloud-init cloud-init-base libmbim-glib4 libmbim-proxy libpython3.12-minimal
118s   libpython3.12-stdlib libpython3.12t64 libqmi-glib5 libqmi-proxy libsepol2
118s 10 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
118s Need to get 7523 kB of archives.
118s After this operation, 158 kB disk space will be freed.
118s Get:1 http://ftpmaster.internal/ubuntu questing/main s390x libsepol2 s390x 3.8.1-1 [332 kB]
118s Get:2 http://ftpmaster.internal/ubuntu questing/main s390x cloud-init-base all 25.2~1g7a0265d3-0ubuntu1 [619 kB]
119s Get:3 http://ftpmaster.internal/ubuntu questing/main s390x libmbim-proxy s390x 1.32.0-1 [6226 B]
119s Get:4 http://ftpmaster.internal/ubuntu questing/main s390x libmbim-glib4 s390x 1.32.0-1 [239 kB]
119s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x libpython3.12t64 s390x 3.12.10-1 [2509 kB]
119s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x libpython3.12-stdlib s390x 3.12.10-1 [2049 kB]
119s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x libpython3.12-minimal s390x 3.12.10-1 [836 kB]
119s Get:8 http://ftpmaster.internal/ubuntu questing/main s390x libqmi-proxy s390x 1.36.0-1 [6190 B]
119s Get:9 http://ftpmaster.internal/ubuntu questing/main s390x libqmi-glib5 s390x 1.36.0-1 [925 kB]
119s Get:10 http://ftpmaster.internal/ubuntu questing/main s390x cloud-init all 25.2~1g7a0265d3-0ubuntu1 [2106 B]
119s Preconfiguring packages ...
119s Fetched 7523 kB in 1s (8756 kB/s)
119s (Reading database ... 
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(Reading database ... 15%
(Reading database ... 20%
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(Reading database ... 35%
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81470 files and directories currently installed.)
119s Preparing to unpack .../libsepol2_3.8.1-1_s390x.deb ...
119s Unpacking libsepol2:s390x (3.8.1-1) over (3.7-1) ...
119s Setting up libsepol2:s390x (3.8.1-1) ...
119s (Reading database ... 
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(Reading database ... 25%
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(Reading database ... 35%
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81470 files and directories currently installed.)
119s Preparing to unpack .../0-cloud-init-base_25.2~1g7a0265d3-0ubuntu1_all.deb ...
119s Unpacking cloud-init-base (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ...
119s Preparing to unpack .../1-libmbim-proxy_1.32.0-1_s390x.deb ...
119s Unpacking libmbim-proxy (1.32.0-1) over (1.31.2-0ubuntu4) ...
119s Preparing to unpack .../2-libmbim-glib4_1.32.0-1_s390x.deb ...
119s Unpacking libmbim-glib4:s390x (1.32.0-1) over (1.31.2-0ubuntu4) ...
119s Preparing to unpack .../3-libpython3.12t64_3.12.10-1_s390x.deb ...
119s Unpacking libpython3.12t64:s390x (3.12.10-1) over (3.12.8-3) ...
119s Preparing to unpack .../4-libpython3.12-stdlib_3.12.10-1_s390x.deb ...
120s Unpacking libpython3.12-stdlib:s390x (3.12.10-1) over (3.12.8-3) ...
120s Preparing to unpack .../5-libpython3.12-minimal_3.12.10-1_s390x.deb ...
120s Unpacking libpython3.12-minimal:s390x (3.12.10-1) over (3.12.8-3) ...
120s Preparing to unpack .../6-libqmi-proxy_1.36.0-1_s390x.deb ...
120s Unpacking libqmi-proxy (1.36.0-1) over (1.35.6-1) ...
120s Preparing to unpack .../7-libqmi-glib5_1.36.0-1_s390x.deb ...
120s Unpacking libqmi-glib5:s390x (1.36.0-1) over (1.35.6-1) ...
120s Preparing to unpack .../8-cloud-init_25.2~1g7a0265d3-0ubuntu1_all.deb ...
120s Unpacking cloud-init (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ...
120s Setting up libpython3.12-minimal:s390x (3.12.10-1) ...
120s Setting up cloud-init-base (25.2~1g7a0265d3-0ubuntu1) ...
121s Setting up libmbim-glib4:s390x (1.32.0-1) ...
121s Setting up cloud-init (25.2~1g7a0265d3-0ubuntu1) ...
121s Setting up libpython3.12-stdlib:s390x (3.12.10-1) ...
121s Setting up libmbim-proxy (1.32.0-1) ...
121s Setting up libpython3.12t64:s390x (3.12.10-1) ...
121s Setting up libqmi-glib5:s390x (1.36.0-1) ...
121s Setting up libqmi-proxy (1.36.0-1) ...
121s Processing triggers for libc-bin (2.41-6ubuntu1) ...
121s Processing triggers for rsyslog (8.2412.0-2ubuntu2) ...
121s Processing triggers for man-db (2.13.0-1) ...
122s Reading package lists...
122s Building dependency tree...
122s Reading state information...
122s Starting pkgProblemResolver with broken count: 0
122s Starting 2 pkgProblemResolver with broken count: 0
122s Done
122s Solving dependencies...
122s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
122s autopkgtest [20:51:44]: rebooting testbed after setup commands that affected boot
139s autopkgtest [20:52:01]: testbed running kernel: Linux 6.14.0-15-generic #15-Ubuntu SMP Sun Apr  6 13:39:00 UTC 2025
141s autopkgtest [20:52:03]: @@@@@@@@@@@@@@@@@@@@ apt-source nwchem
148s Get:1 http://ftpmaster.internal/ubuntu questing/universe nwchem 7.2.3-7build1 (dsc) [2834 B]
148s Get:2 http://ftpmaster.internal/ubuntu questing/universe nwchem 7.2.3-7build1 (tar) [168 MB]
148s Get:3 http://ftpmaster.internal/ubuntu questing/universe nwchem 7.2.3-7build1 (diff) [560 kB]
148s gpgv: Signature made Fri Jan  3 11:06:21 2025 UTC
148s gpgv:                using RSA key 568BF22A66337CBFC9A6B9B72C83DBC8E9BD0E37
148s gpgv: Can't check signature: No public key
148s dpkg-source: warning: cannot verify inline signature for ./nwchem_7.2.3-7build1.dsc: no acceptable signature found
172s autopkgtest [20:52:34]: testing package nwchem version 7.2.3-7build1
173s autopkgtest [20:52:35]: build not needed
219s autopkgtest [20:53:21]: test testsuite.sh: preparing testbed
219s Reading package lists...
220s Building dependency tree...
220s Reading state information...
220s Starting pkgProblemResolver with broken count: 0
220s Starting 2 pkgProblemResolver with broken count: 0
220s Done
220s The following NEW packages will be installed:
220s   libblas3 libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libhwloc-plugins
220s   libhwloc15 liblapack3 libmunge2 libopenmpi40 libpciaccess0 libpmix2t64
220s   librdmacm1t64 libscalapack-openmpi2.2 libxnvctrl0 mpi-default-bin nwchem
220s   nwchem-data nwchem-openmpi ocl-icd-libopencl1 openmpi-bin openmpi-common
220s 0 upgraded, 21 newly installed, 0 to remove and 0 not upgraded.
220s Need to get 29.7 MB of archives.
220s After this operation, 150 MB of additional disk space will be used.
220s Get:1 http://ftpmaster.internal/ubuntu questing/main s390x libblas3 s390x 3.12.1-2 [252 kB]
220s Get:2 http://ftpmaster.internal/ubuntu questing/main s390x libevent-pthreads-2.1-7t64 s390x 2.1.12-stable-10 [7870 B]
220s Get:3 http://ftpmaster.internal/ubuntu questing/main s390x librdmacm1t64 s390x 56.0-4ubuntu1 [74.0 kB]
220s Get:4 http://ftpmaster.internal/ubuntu questing/universe s390x libfabric1 s390x 1.17.0-3.1 [558 kB]
220s Get:5 http://ftpmaster.internal/ubuntu questing/main s390x libgfortran5 s390x 15-20250404-0ubuntu1 [621 kB]
221s Get:6 http://ftpmaster.internal/ubuntu questing/universe s390x libhwloc15 s390x 2.12.0-1 [176 kB]
221s Get:7 http://ftpmaster.internal/ubuntu questing/main s390x liblapack3 s390x 3.12.1-2 [2971 kB]
221s Get:8 http://ftpmaster.internal/ubuntu questing/universe s390x libmunge2 s390x 0.5.16-1 [15.2 kB]
221s Get:9 http://ftpmaster.internal/ubuntu questing/main s390x libpciaccess0 s390x 0.17-3build1 [19.0 kB]
221s Get:10 http://ftpmaster.internal/ubuntu questing/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu4 [12.7 kB]
221s Get:11 http://ftpmaster.internal/ubuntu questing/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1build1 [41.1 kB]
221s Get:12 http://ftpmaster.internal/ubuntu questing/universe s390x libhwloc-plugins s390x 2.12.0-1 [16.1 kB]
221s Get:13 http://ftpmaster.internal/ubuntu questing/universe s390x libpmix2t64 s390x 5.0.6-5 [715 kB]
221s Get:14 http://ftpmaster.internal/ubuntu questing/universe s390x libopenmpi40 s390x 5.0.7-1 [2196 kB]
221s Get:15 http://ftpmaster.internal/ubuntu questing/universe s390x openmpi-common all 5.0.7-1 [97.9 kB]
221s Get:16 http://ftpmaster.internal/ubuntu questing/universe s390x openmpi-bin s390x 5.0.7-1 [200 kB]
221s Get:17 http://ftpmaster.internal/ubuntu questing/universe s390x mpi-default-bin s390x 1.18 [2510 B]
221s Get:18 http://ftpmaster.internal/ubuntu questing/universe s390x libscalapack-openmpi2.2 s390x 2.2.2-1ubuntu1 [1992 kB]
221s Get:19 http://ftpmaster.internal/ubuntu questing/universe s390x nwchem-data all 7.2.3-7build1 [6076 kB]
221s Get:20 http://ftpmaster.internal/ubuntu questing/universe s390x nwchem-openmpi s390x 7.2.3-7build1 [13.6 MB]
221s Get:21 http://ftpmaster.internal/ubuntu questing/universe s390x nwchem all 7.2.3-7build1 [17.9 kB]
222s Fetched 29.7 MB in 2s (18.9 MB/s)
222s Selecting previously unselected package libblas3:s390x.
222s (Reading database ... 
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81470 files and directories currently installed.)
222s Preparing to unpack .../00-libblas3_3.12.1-2_s390x.deb ...
222s Unpacking libblas3:s390x (3.12.1-2) ...
222s Selecting previously unselected package libevent-pthreads-2.1-7t64:s390x.
222s Preparing to unpack .../01-libevent-pthreads-2.1-7t64_2.1.12-stable-10_s390x.deb ...
222s Unpacking libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ...
222s Selecting previously unselected package librdmacm1t64:s390x.
222s Preparing to unpack .../02-librdmacm1t64_56.0-4ubuntu1_s390x.deb ...
222s Unpacking librdmacm1t64:s390x (56.0-4ubuntu1) ...
222s Selecting previously unselected package libfabric1:s390x.
222s Preparing to unpack .../03-libfabric1_1.17.0-3.1_s390x.deb ...
222s Unpacking libfabric1:s390x (1.17.0-3.1) ...
222s Selecting previously unselected package libgfortran5:s390x.
222s Preparing to unpack .../04-libgfortran5_15-20250404-0ubuntu1_s390x.deb ...
222s Unpacking libgfortran5:s390x (15-20250404-0ubuntu1) ...
222s Selecting previously unselected package libhwloc15:s390x.
222s Preparing to unpack .../05-libhwloc15_2.12.0-1_s390x.deb ...
222s Unpacking libhwloc15:s390x (2.12.0-1) ...
222s Selecting previously unselected package liblapack3:s390x.
222s Preparing to unpack .../06-liblapack3_3.12.1-2_s390x.deb ...
222s Unpacking liblapack3:s390x (3.12.1-2) ...
222s Selecting previously unselected package libmunge2:s390x.
222s Preparing to unpack .../07-libmunge2_0.5.16-1_s390x.deb ...
222s Unpacking libmunge2:s390x (0.5.16-1) ...
222s Selecting previously unselected package libpciaccess0:s390x.
222s Preparing to unpack .../08-libpciaccess0_0.17-3build1_s390x.deb ...
222s Unpacking libpciaccess0:s390x (0.17-3build1) ...
222s Selecting previously unselected package libxnvctrl0:s390x.
222s Preparing to unpack .../09-libxnvctrl0_510.47.03-0ubuntu4_s390x.deb ...
222s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu4) ...
222s Selecting previously unselected package ocl-icd-libopencl1:s390x.
222s Preparing to unpack .../10-ocl-icd-libopencl1_2.3.2-1build1_s390x.deb ...
222s Unpacking ocl-icd-libopencl1:s390x (2.3.2-1build1) ...
222s Selecting previously unselected package libhwloc-plugins:s390x.
222s Preparing to unpack .../11-libhwloc-plugins_2.12.0-1_s390x.deb ...
222s Unpacking libhwloc-plugins:s390x (2.12.0-1) ...
222s Selecting previously unselected package libpmix2t64:s390x.
222s Preparing to unpack .../12-libpmix2t64_5.0.6-5_s390x.deb ...
222s Unpacking libpmix2t64:s390x (5.0.6-5) ...
222s Selecting previously unselected package libopenmpi40:s390x.
222s Preparing to unpack .../13-libopenmpi40_5.0.7-1_s390x.deb ...
222s Unpacking libopenmpi40:s390x (5.0.7-1) ...
222s Selecting previously unselected package openmpi-common.
222s Preparing to unpack .../14-openmpi-common_5.0.7-1_all.deb ...
222s Unpacking openmpi-common (5.0.7-1) ...
222s Selecting previously unselected package openmpi-bin.
222s Preparing to unpack .../15-openmpi-bin_5.0.7-1_s390x.deb ...
222s Unpacking openmpi-bin (5.0.7-1) ...
222s Selecting previously unselected package mpi-default-bin.
222s Preparing to unpack .../16-mpi-default-bin_1.18_s390x.deb ...
222s Unpacking mpi-default-bin (1.18) ...
222s Selecting previously unselected package libscalapack-openmpi2.2:s390x.
222s Preparing to unpack .../17-libscalapack-openmpi2.2_2.2.2-1ubuntu1_s390x.deb ...
222s Unpacking libscalapack-openmpi2.2:s390x (2.2.2-1ubuntu1) ...
222s Selecting previously unselected package nwchem-data.
222s Preparing to unpack .../18-nwchem-data_7.2.3-7build1_all.deb ...
222s Unpacking nwchem-data (7.2.3-7build1) ...
222s Selecting previously unselected package nwchem-openmpi.
222s Preparing to unpack .../19-nwchem-openmpi_7.2.3-7build1_s390x.deb ...
222s Unpacking nwchem-openmpi (7.2.3-7build1) ...
223s Selecting previously unselected package nwchem.
223s Preparing to unpack .../20-nwchem_7.2.3-7build1_all.deb ...
223s Unpacking nwchem (7.2.3-7build1) ...
223s Setting up libpciaccess0:s390x (0.17-3build1) ...
223s Setting up libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ...
223s Setting up nwchem-data (7.2.3-7build1) ...
223s Setting up libxnvctrl0:s390x (510.47.03-0ubuntu4) ...
223s Setting up libblas3:s390x (3.12.1-2) ...
223s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
223s Setting up libmunge2:s390x (0.5.16-1) ...
223s Setting up libhwloc15:s390x (2.12.0-1) ...
223s Setting up libgfortran5:s390x (15-20250404-0ubuntu1) ...
223s Setting up ocl-icd-libopencl1:s390x (2.3.2-1build1) ...
223s Setting up openmpi-common (5.0.7-1) ...
223s Setting up librdmacm1t64:s390x (56.0-4ubuntu1) ...
223s Setting up libfabric1:s390x (1.17.0-3.1) ...
223s Setting up liblapack3:s390x (3.12.1-2) ...
223s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
223s Setting up libhwloc-plugins:s390x (2.12.0-1) ...
223s Setting up libpmix2t64:s390x (5.0.6-5) ...
223s Setting up libopenmpi40:s390x (5.0.7-1) ...
223s Setting up openmpi-bin (5.0.7-1) ...
223s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
223s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist
223s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
223s Setting up mpi-default-bin (1.18) ...
223s Setting up libscalapack-openmpi2.2:s390x (2.2.2-1ubuntu1) ...
223s Setting up nwchem-openmpi (7.2.3-7build1) ...
223s Setting up nwchem (7.2.3-7build1) ...
223s Processing triggers for man-db (2.13.0-1) ...
223s Processing triggers for libc-bin (2.41-6ubuntu1) ...
224s autopkgtest [20:53:26]: test testsuite.sh: [-----------------------
224s ===== TESTING NWCHEM WITH DEFAULT MPI INSTALLATION =====
224s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation)
224s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation)
224s skipping extra tests on s390x
224s Skipping mpich tests on s390x due to flaky mpich support
224s autopkgtest [20:53:26]: test testsuite.sh: -----------------------]
225s testsuite.sh         PASS
225s autopkgtest [20:53:27]: test testsuite.sh:  - - - - - - - - - - results - - - - - - - - - -
225s autopkgtest [20:53:27]: test testsuite-openmpi: preparing testbed
298s autopkgtest [20:54:40]: testbed dpkg architecture: s390x
298s autopkgtest [20:54:40]: testbed apt version: 3.0.0
298s autopkgtest [20:54:40]: @@@@@@@@@@@@@@@@@@@@ test bed setup
298s autopkgtest [20:54:40]: testbed release detected to be: questing
299s autopkgtest [20:54:41]: updating testbed package index (apt update)
299s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB]
300s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease
300s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease
300s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease
300s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [1430 kB]
300s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [33.7 kB]
300s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [149 kB]
300s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main s390x Packages [178 kB]
300s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x Packages [1275 kB]
301s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse s390x Packages [26.2 kB]
301s Fetched 3202 kB in 2s (1897 kB/s)
302s Reading package lists...
302s autopkgtest [20:54:44]: upgrading testbed (apt dist-upgrade and autopurge)
302s Reading package lists...
302s Building dependency tree...
302s Reading state information...
302s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
302s Starting 2 pkgProblemResolver with broken count: 0
302s Done
303s Entering ResolveByKeep
303s 
303s Calculating upgrade...
303s The following packages will be upgraded:
303s   cloud-init cloud-init-base libmbim-glib4 libmbim-proxy libpython3.12-minimal
303s   libpython3.12-stdlib libpython3.12t64 libqmi-glib5 libqmi-proxy libsepol2
303s 10 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
303s Need to get 7523 kB of archives.
303s After this operation, 158 kB disk space will be freed.
303s Get:1 http://ftpmaster.internal/ubuntu questing/main s390x libsepol2 s390x 3.8.1-1 [332 kB]
303s Get:2 http://ftpmaster.internal/ubuntu questing/main s390x cloud-init-base all 25.2~1g7a0265d3-0ubuntu1 [619 kB]
304s Get:3 http://ftpmaster.internal/ubuntu questing/main s390x libmbim-proxy s390x 1.32.0-1 [6226 B]
304s Get:4 http://ftpmaster.internal/ubuntu questing/main s390x libmbim-glib4 s390x 1.32.0-1 [239 kB]
304s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x libpython3.12t64 s390x 3.12.10-1 [2509 kB]
304s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x libpython3.12-stdlib s390x 3.12.10-1 [2049 kB]
305s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x libpython3.12-minimal s390x 3.12.10-1 [836 kB]
305s Get:8 http://ftpmaster.internal/ubuntu questing/main s390x libqmi-proxy s390x 1.36.0-1 [6190 B]
305s Get:9 http://ftpmaster.internal/ubuntu questing/main s390x libqmi-glib5 s390x 1.36.0-1 [925 kB]
305s Get:10 http://ftpmaster.internal/ubuntu questing/main s390x cloud-init all 25.2~1g7a0265d3-0ubuntu1 [2106 B]
305s Preconfiguring packages ...
305s Fetched 7523 kB in 2s (3686 kB/s)
305s (Reading database ... 
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(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81470 files and directories currently installed.)
305s Preparing to unpack .../libsepol2_3.8.1-1_s390x.deb ...
305s Unpacking libsepol2:s390x (3.8.1-1) over (3.7-1) ...
305s Setting up libsepol2:s390x (3.8.1-1) ...
305s (Reading database ... 
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(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81470 files and directories currently installed.)
305s Preparing to unpack .../0-cloud-init-base_25.2~1g7a0265d3-0ubuntu1_all.deb ...
306s Unpacking cloud-init-base (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ...
306s Preparing to unpack .../1-libmbim-proxy_1.32.0-1_s390x.deb ...
306s Unpacking libmbim-proxy (1.32.0-1) over (1.31.2-0ubuntu4) ...
306s Preparing to unpack .../2-libmbim-glib4_1.32.0-1_s390x.deb ...
306s Unpacking libmbim-glib4:s390x (1.32.0-1) over (1.31.2-0ubuntu4) ...
306s Preparing to unpack .../3-libpython3.12t64_3.12.10-1_s390x.deb ...
306s Unpacking libpython3.12t64:s390x (3.12.10-1) over (3.12.8-3) ...
306s Preparing to unpack .../4-libpython3.12-stdlib_3.12.10-1_s390x.deb ...
306s Unpacking libpython3.12-stdlib:s390x (3.12.10-1) over (3.12.8-3) ...
306s Preparing to unpack .../5-libpython3.12-minimal_3.12.10-1_s390x.deb ...
306s Unpacking libpython3.12-minimal:s390x (3.12.10-1) over (3.12.8-3) ...
306s Preparing to unpack .../6-libqmi-proxy_1.36.0-1_s390x.deb ...
306s Unpacking libqmi-proxy (1.36.0-1) over (1.35.6-1) ...
306s Preparing to unpack .../7-libqmi-glib5_1.36.0-1_s390x.deb ...
306s Unpacking libqmi-glib5:s390x (1.36.0-1) over (1.35.6-1) ...
306s Preparing to unpack .../8-cloud-init_25.2~1g7a0265d3-0ubuntu1_all.deb ...
306s Unpacking cloud-init (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ...
306s Setting up libpython3.12-minimal:s390x (3.12.10-1) ...
306s Setting up cloud-init-base (25.2~1g7a0265d3-0ubuntu1) ...
307s Setting up libmbim-glib4:s390x (1.32.0-1) ...
307s Setting up cloud-init (25.2~1g7a0265d3-0ubuntu1) ...
307s Setting up libpython3.12-stdlib:s390x (3.12.10-1) ...
307s Setting up libmbim-proxy (1.32.0-1) ...
307s Setting up libpython3.12t64:s390x (3.12.10-1) ...
307s Setting up libqmi-glib5:s390x (1.36.0-1) ...
307s Setting up libqmi-proxy (1.36.0-1) ...
307s Processing triggers for libc-bin (2.41-6ubuntu1) ...
307s Processing triggers for rsyslog (8.2412.0-2ubuntu2) ...
307s Processing triggers for man-db (2.13.0-1) ...
308s Reading package lists...
308s Building dependency tree...
308s Reading state information...
308s Starting pkgProblemResolver with broken count: 0
308s Starting 2 pkgProblemResolver with broken count: 0
308s Done
308s Solving dependencies...
308s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
309s autopkgtest [20:54:51]: rebooting testbed after setup commands that affected boot
328s Reading package lists...
328s Building dependency tree...
328s Reading state information...
328s Starting pkgProblemResolver with broken count: 0
328s Starting 2 pkgProblemResolver with broken count: 0
328s Done
328s The following NEW packages will be installed:
328s   libblas3 libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libhwloc-plugins
328s   libhwloc15 liblapack3 libmunge2 libopenmpi40 libpciaccess0 libpmix2t64
328s   librdmacm1t64 libscalapack-openmpi2.2 libxnvctrl0 mpi-default-bin
328s   nwchem-data nwchem-openmpi ocl-icd-libopencl1 openmpi-bin openmpi-common
328s 0 upgraded, 20 newly installed, 0 to remove and 0 not upgraded.
328s Need to get 29.7 MB of archives.
328s After this operation, 150 MB of additional disk space will be used.
328s Get:1 http://ftpmaster.internal/ubuntu questing/main s390x libblas3 s390x 3.12.1-2 [252 kB]
329s Get:2 http://ftpmaster.internal/ubuntu questing/main s390x libevent-pthreads-2.1-7t64 s390x 2.1.12-stable-10 [7870 B]
329s Get:3 http://ftpmaster.internal/ubuntu questing/main s390x librdmacm1t64 s390x 56.0-4ubuntu1 [74.0 kB]
329s Get:4 http://ftpmaster.internal/ubuntu questing/universe s390x libfabric1 s390x 1.17.0-3.1 [558 kB]
329s Get:5 http://ftpmaster.internal/ubuntu questing/main s390x libgfortran5 s390x 15-20250404-0ubuntu1 [621 kB]
329s Get:6 http://ftpmaster.internal/ubuntu questing/universe s390x libhwloc15 s390x 2.12.0-1 [176 kB]
329s Get:7 http://ftpmaster.internal/ubuntu questing/main s390x liblapack3 s390x 3.12.1-2 [2971 kB]
329s Get:8 http://ftpmaster.internal/ubuntu questing/universe s390x libmunge2 s390x 0.5.16-1 [15.2 kB]
329s Get:9 http://ftpmaster.internal/ubuntu questing/main s390x libpciaccess0 s390x 0.17-3build1 [19.0 kB]
329s Get:10 http://ftpmaster.internal/ubuntu questing/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu4 [12.7 kB]
329s Get:11 http://ftpmaster.internal/ubuntu questing/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1build1 [41.1 kB]
329s Get:12 http://ftpmaster.internal/ubuntu questing/universe s390x libhwloc-plugins s390x 2.12.0-1 [16.1 kB]
329s Get:13 http://ftpmaster.internal/ubuntu questing/universe s390x libpmix2t64 s390x 5.0.6-5 [715 kB]
329s Get:14 http://ftpmaster.internal/ubuntu questing/universe s390x libopenmpi40 s390x 5.0.7-1 [2196 kB]
330s Get:15 http://ftpmaster.internal/ubuntu questing/universe s390x openmpi-common all 5.0.7-1 [97.9 kB]
330s Get:16 http://ftpmaster.internal/ubuntu questing/universe s390x openmpi-bin s390x 5.0.7-1 [200 kB]
330s Get:17 http://ftpmaster.internal/ubuntu questing/universe s390x mpi-default-bin s390x 1.18 [2510 B]
330s Get:18 http://ftpmaster.internal/ubuntu questing/universe s390x libscalapack-openmpi2.2 s390x 2.2.2-1ubuntu1 [1992 kB]
330s Get:19 http://ftpmaster.internal/ubuntu questing/universe s390x nwchem-data all 7.2.3-7build1 [6076 kB]
330s Get:20 http://ftpmaster.internal/ubuntu questing/universe s390x nwchem-openmpi s390x 7.2.3-7build1 [13.6 MB]
331s Fetched 29.7 MB in 3s (9530 kB/s)
331s Selecting previously unselected package libblas3:s390x.
332s (Reading database ... 
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(Reading database ... 81470 files and directories currently installed.)
332s Preparing to unpack .../00-libblas3_3.12.1-2_s390x.deb ...
332s Unpacking libblas3:s390x (3.12.1-2) ...
332s Selecting previously unselected package libevent-pthreads-2.1-7t64:s390x.
332s Preparing to unpack .../01-libevent-pthreads-2.1-7t64_2.1.12-stable-10_s390x.deb ...
332s Unpacking libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ...
332s Selecting previously unselected package librdmacm1t64:s390x.
332s Preparing to unpack .../02-librdmacm1t64_56.0-4ubuntu1_s390x.deb ...
332s Unpacking librdmacm1t64:s390x (56.0-4ubuntu1) ...
332s Selecting previously unselected package libfabric1:s390x.
332s Preparing to unpack .../03-libfabric1_1.17.0-3.1_s390x.deb ...
332s Unpacking libfabric1:s390x (1.17.0-3.1) ...
332s Selecting previously unselected package libgfortran5:s390x.
332s Preparing to unpack .../04-libgfortran5_15-20250404-0ubuntu1_s390x.deb ...
332s Unpacking libgfortran5:s390x (15-20250404-0ubuntu1) ...
332s Selecting previously unselected package libhwloc15:s390x.
332s Preparing to unpack .../05-libhwloc15_2.12.0-1_s390x.deb ...
332s Unpacking libhwloc15:s390x (2.12.0-1) ...
332s Selecting previously unselected package liblapack3:s390x.
332s Preparing to unpack .../06-liblapack3_3.12.1-2_s390x.deb ...
332s Unpacking liblapack3:s390x (3.12.1-2) ...
332s Selecting previously unselected package libmunge2:s390x.
332s Preparing to unpack .../07-libmunge2_0.5.16-1_s390x.deb ...
332s Unpacking libmunge2:s390x (0.5.16-1) ...
332s Selecting previously unselected package libpciaccess0:s390x.
332s Preparing to unpack .../08-libpciaccess0_0.17-3build1_s390x.deb ...
332s Unpacking libpciaccess0:s390x (0.17-3build1) ...
332s Selecting previously unselected package libxnvctrl0:s390x.
332s Preparing to unpack .../09-libxnvctrl0_510.47.03-0ubuntu4_s390x.deb ...
332s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu4) ...
332s Selecting previously unselected package ocl-icd-libopencl1:s390x.
332s Preparing to unpack .../10-ocl-icd-libopencl1_2.3.2-1build1_s390x.deb ...
332s Unpacking ocl-icd-libopencl1:s390x (2.3.2-1build1) ...
332s Selecting previously unselected package libhwloc-plugins:s390x.
332s Preparing to unpack .../11-libhwloc-plugins_2.12.0-1_s390x.deb ...
332s Unpacking libhwloc-plugins:s390x (2.12.0-1) ...
332s Selecting previously unselected package libpmix2t64:s390x.
332s Preparing to unpack .../12-libpmix2t64_5.0.6-5_s390x.deb ...
332s Unpacking libpmix2t64:s390x (5.0.6-5) ...
332s Selecting previously unselected package libopenmpi40:s390x.
332s Preparing to unpack .../13-libopenmpi40_5.0.7-1_s390x.deb ...
332s Unpacking libopenmpi40:s390x (5.0.7-1) ...
332s Selecting previously unselected package openmpi-common.
332s Preparing to unpack .../14-openmpi-common_5.0.7-1_all.deb ...
332s Unpacking openmpi-common (5.0.7-1) ...
332s Selecting previously unselected package openmpi-bin.
332s Preparing to unpack .../15-openmpi-bin_5.0.7-1_s390x.deb ...
332s Unpacking openmpi-bin (5.0.7-1) ...
332s Selecting previously unselected package mpi-default-bin.
332s Preparing to unpack .../16-mpi-default-bin_1.18_s390x.deb ...
332s Unpacking mpi-default-bin (1.18) ...
332s Selecting previously unselected package libscalapack-openmpi2.2:s390x.
332s Preparing to unpack .../17-libscalapack-openmpi2.2_2.2.2-1ubuntu1_s390x.deb ...
332s Unpacking libscalapack-openmpi2.2:s390x (2.2.2-1ubuntu1) ...
332s Selecting previously unselected package nwchem-data.
332s Preparing to unpack .../18-nwchem-data_7.2.3-7build1_all.deb ...
332s Unpacking nwchem-data (7.2.3-7build1) ...
332s Selecting previously unselected package nwchem-openmpi.
332s Preparing to unpack .../19-nwchem-openmpi_7.2.3-7build1_s390x.deb ...
332s Unpacking nwchem-openmpi (7.2.3-7build1) ...
332s Setting up libpciaccess0:s390x (0.17-3build1) ...
332s Setting up libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ...
332s Setting up nwchem-data (7.2.3-7build1) ...
332s Setting up libxnvctrl0:s390x (510.47.03-0ubuntu4) ...
332s Setting up libblas3:s390x (3.12.1-2) ...
332s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
332s Setting up libmunge2:s390x (0.5.16-1) ...
332s Setting up libhwloc15:s390x (2.12.0-1) ...
332s Setting up libgfortran5:s390x (15-20250404-0ubuntu1) ...
332s Setting up ocl-icd-libopencl1:s390x (2.3.2-1build1) ...
332s Setting up openmpi-common (5.0.7-1) ...
332s Setting up librdmacm1t64:s390x (56.0-4ubuntu1) ...
332s Setting up libfabric1:s390x (1.17.0-3.1) ...
332s Setting up liblapack3:s390x (3.12.1-2) ...
332s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
332s Setting up libhwloc-plugins:s390x (2.12.0-1) ...
332s Setting up libpmix2t64:s390x (5.0.6-5) ...
332s Setting up libopenmpi40:s390x (5.0.7-1) ...
332s Setting up openmpi-bin (5.0.7-1) ...
332s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
332s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist
332s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
332s Setting up mpi-default-bin (1.18) ...
332s Setting up libscalapack-openmpi2.2:s390x (2.2.2-1ubuntu1) ...
332s Setting up nwchem-openmpi (7.2.3-7build1) ...
332s Processing triggers for man-db (2.13.0-1) ...
333s Processing triggers for libc-bin (2.41-6ubuntu1) ...
385s autopkgtest [20:56:07]: test testsuite-openmpi: [-----------------------
386s ===== TESTING NWCHEM BUILD FOR openmpi =====
386s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation)
386s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation)
386s skipping extra tests on s390x
386s Skipping mpich tests on s390x due to flaky mpich support
386s autopkgtest [20:56:08]: test testsuite-openmpi: -----------------------]
386s testsuite-openmpi    PASS
386s autopkgtest [20:56:08]: test testsuite-openmpi:  - - - - - - - - - - results - - - - - - - - - -
387s autopkgtest [20:56:09]: test testsuite-mpich: preparing testbed
465s autopkgtest [20:57:27]: testbed dpkg architecture: s390x
465s autopkgtest [20:57:27]: testbed apt version: 3.0.0
465s autopkgtest [20:57:27]: @@@@@@@@@@@@@@@@@@@@ test bed setup
465s autopkgtest [20:57:27]: testbed release detected to be: questing
466s autopkgtest [20:57:28]: updating testbed package index (apt update)
466s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB]
467s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease
467s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease
467s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease
467s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [33.7 kB]
467s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [149 kB]
467s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [1430 kB]
467s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main s390x Packages [178 kB]
467s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x Packages [1275 kB]
467s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse s390x Packages [26.2 kB]
467s Fetched 3202 kB in 1s (2941 kB/s)
468s Reading package lists...
468s autopkgtest [20:57:30]: upgrading testbed (apt dist-upgrade and autopurge)
469s Reading package lists...
469s Building dependency tree...
469s Reading state information...
469s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
469s Starting 2 pkgProblemResolver with broken count: 0
469s Done
469s Entering ResolveByKeep
469s 
469s Calculating upgrade...
469s The following packages will be upgraded:
469s   cloud-init cloud-init-base libmbim-glib4 libmbim-proxy libpython3.12-minimal
469s   libpython3.12-stdlib libpython3.12t64 libqmi-glib5 libqmi-proxy libsepol2
470s 10 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
470s Need to get 7523 kB of archives.
470s After this operation, 158 kB disk space will be freed.
470s Get:1 http://ftpmaster.internal/ubuntu questing/main s390x libsepol2 s390x 3.8.1-1 [332 kB]
470s Get:2 http://ftpmaster.internal/ubuntu questing/main s390x cloud-init-base all 25.2~1g7a0265d3-0ubuntu1 [619 kB]
470s Get:3 http://ftpmaster.internal/ubuntu questing/main s390x libmbim-proxy s390x 1.32.0-1 [6226 B]
470s Get:4 http://ftpmaster.internal/ubuntu questing/main s390x libmbim-glib4 s390x 1.32.0-1 [239 kB]
470s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x libpython3.12t64 s390x 3.12.10-1 [2509 kB]
470s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x libpython3.12-stdlib s390x 3.12.10-1 [2049 kB]
470s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x libpython3.12-minimal s390x 3.12.10-1 [836 kB]
470s Get:8 http://ftpmaster.internal/ubuntu questing/main s390x libqmi-proxy s390x 1.36.0-1 [6190 B]
470s Get:9 http://ftpmaster.internal/ubuntu questing/main s390x libqmi-glib5 s390x 1.36.0-1 [925 kB]
470s Get:10 http://ftpmaster.internal/ubuntu questing/main s390x cloud-init all 25.2~1g7a0265d3-0ubuntu1 [2106 B]
470s Preconfiguring packages ...
470s Fetched 7523 kB in 1s (9325 kB/s)
471s (Reading database ... 
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(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81470 files and directories currently installed.)
471s Preparing to unpack .../libsepol2_3.8.1-1_s390x.deb ...
471s Unpacking libsepol2:s390x (3.8.1-1) over (3.7-1) ...
471s Setting up libsepol2:s390x (3.8.1-1) ...
471s (Reading database ... 
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(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81470 files and directories currently installed.)
471s Preparing to unpack .../0-cloud-init-base_25.2~1g7a0265d3-0ubuntu1_all.deb ...
471s Unpacking cloud-init-base (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ...
471s Preparing to unpack .../1-libmbim-proxy_1.32.0-1_s390x.deb ...
471s Unpacking libmbim-proxy (1.32.0-1) over (1.31.2-0ubuntu4) ...
471s Preparing to unpack .../2-libmbim-glib4_1.32.0-1_s390x.deb ...
471s Unpacking libmbim-glib4:s390x (1.32.0-1) over (1.31.2-0ubuntu4) ...
471s Preparing to unpack .../3-libpython3.12t64_3.12.10-1_s390x.deb ...
471s Unpacking libpython3.12t64:s390x (3.12.10-1) over (3.12.8-3) ...
471s Preparing to unpack .../4-libpython3.12-stdlib_3.12.10-1_s390x.deb ...
471s Unpacking libpython3.12-stdlib:s390x (3.12.10-1) over (3.12.8-3) ...
471s Preparing to unpack .../5-libpython3.12-minimal_3.12.10-1_s390x.deb ...
471s Unpacking libpython3.12-minimal:s390x (3.12.10-1) over (3.12.8-3) ...
471s Preparing to unpack .../6-libqmi-proxy_1.36.0-1_s390x.deb ...
471s Unpacking libqmi-proxy (1.36.0-1) over (1.35.6-1) ...
471s Preparing to unpack .../7-libqmi-glib5_1.36.0-1_s390x.deb ...
471s Unpacking libqmi-glib5:s390x (1.36.0-1) over (1.35.6-1) ...
471s Preparing to unpack .../8-cloud-init_25.2~1g7a0265d3-0ubuntu1_all.deb ...
471s Unpacking cloud-init (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ...
471s Setting up libpython3.12-minimal:s390x (3.12.10-1) ...
471s Setting up cloud-init-base (25.2~1g7a0265d3-0ubuntu1) ...
472s Setting up libmbim-glib4:s390x (1.32.0-1) ...
472s Setting up cloud-init (25.2~1g7a0265d3-0ubuntu1) ...
472s Setting up libpython3.12-stdlib:s390x (3.12.10-1) ...
472s Setting up libmbim-proxy (1.32.0-1) ...
472s Setting up libpython3.12t64:s390x (3.12.10-1) ...
472s Setting up libqmi-glib5:s390x (1.36.0-1) ...
472s Setting up libqmi-proxy (1.36.0-1) ...
472s Processing triggers for libc-bin (2.41-6ubuntu1) ...
472s Processing triggers for rsyslog (8.2412.0-2ubuntu2) ...
472s Processing triggers for man-db (2.13.0-1) ...
473s Reading package lists...
473s Building dependency tree...
473s Reading state information...
473s Starting pkgProblemResolver with broken count: 0
473s Starting 2 pkgProblemResolver with broken count: 0
473s Done
473s Solving dependencies...
474s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
474s autopkgtest [20:57:36]: rebooting testbed after setup commands that affected boot
495s Reading package lists...
495s Building dependency tree...
495s Reading state information...
496s Starting pkgProblemResolver with broken count: 0
496s Starting 2 pkgProblemResolver with broken count: 0
496s Done
496s The following NEW packages will be installed:
496s   hwloc-nox libblas3 libevent-pthreads-2.1-7t64 libfabric1 libgfortran5
496s   libhwloc-plugins libhwloc15 liblapack3 libmpich12 libmunge2 libopenmpi40
496s   libpciaccess0 libpmix2t64 librdmacm1t64 libscalapack-mpich2.2 libslurm42t64
496s   libxnvctrl0 mpi-default-bin mpich nwchem-data nwchem-mpich
496s   ocl-icd-libopencl1 openmpi-bin openmpi-common
496s 0 upgraded, 24 newly installed, 0 to remove and 0 not upgraded.
496s Need to get 32.5 MB of archives.
496s After this operation, 159 MB of additional disk space will be used.
496s Get:1 http://ftpmaster.internal/ubuntu questing/main s390x libblas3 s390x 3.12.1-2 [252 kB]
496s Get:2 http://ftpmaster.internal/ubuntu questing/main s390x libevent-pthreads-2.1-7t64 s390x 2.1.12-stable-10 [7870 B]
496s Get:3 http://ftpmaster.internal/ubuntu questing/main s390x librdmacm1t64 s390x 56.0-4ubuntu1 [74.0 kB]
496s Get:4 http://ftpmaster.internal/ubuntu questing/universe s390x libfabric1 s390x 1.17.0-3.1 [558 kB]
496s Get:5 http://ftpmaster.internal/ubuntu questing/main s390x libgfortran5 s390x 15-20250404-0ubuntu1 [621 kB]
496s Get:6 http://ftpmaster.internal/ubuntu questing/universe s390x libhwloc15 s390x 2.12.0-1 [176 kB]
496s Get:7 http://ftpmaster.internal/ubuntu questing/main s390x liblapack3 s390x 3.12.1-2 [2971 kB]
497s Get:8 http://ftpmaster.internal/ubuntu questing/universe s390x libmunge2 s390x 0.5.16-1 [15.2 kB]
497s Get:9 http://ftpmaster.internal/ubuntu questing/main s390x libpciaccess0 s390x 0.17-3build1 [19.0 kB]
497s Get:10 http://ftpmaster.internal/ubuntu questing/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu4 [12.7 kB]
497s Get:11 http://ftpmaster.internal/ubuntu questing/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1build1 [41.1 kB]
497s Get:12 http://ftpmaster.internal/ubuntu questing/universe s390x libhwloc-plugins s390x 2.12.0-1 [16.1 kB]
497s Get:13 http://ftpmaster.internal/ubuntu questing/universe s390x libpmix2t64 s390x 5.0.6-5 [715 kB]
497s Get:14 http://ftpmaster.internal/ubuntu questing/universe s390x libopenmpi40 s390x 5.0.7-1 [2196 kB]
497s Get:15 http://ftpmaster.internal/ubuntu questing/universe s390x openmpi-common all 5.0.7-1 [97.9 kB]
497s Get:16 http://ftpmaster.internal/ubuntu questing/universe s390x openmpi-bin s390x 5.0.7-1 [200 kB]
497s Get:17 http://ftpmaster.internal/ubuntu questing/universe s390x mpi-default-bin s390x 1.18 [2510 B]
497s Get:18 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x libmpich12 s390x 4.3.0-5 [1742 kB]
497s Get:19 http://ftpmaster.internal/ubuntu questing/universe s390x libscalapack-mpich2.2 s390x 2.2.2-1ubuntu1 [1985 kB]
497s Get:20 http://ftpmaster.internal/ubuntu questing/universe s390x libslurm42t64 s390x 24.11.3-2 [628 kB]
497s Get:21 http://ftpmaster.internal/ubuntu questing/universe s390x nwchem-data all 7.2.3-7build1 [6076 kB]
497s Get:22 http://ftpmaster.internal/ubuntu questing/universe s390x hwloc-nox s390x 2.12.0-1 [224 kB]
497s Get:23 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x mpich s390x 4.3.0-5 [209 kB]
497s Get:24 http://ftpmaster.internal/ubuntu questing/universe s390x nwchem-mpich s390x 7.2.3-7build1 [13.6 MB]
498s Fetched 32.5 MB in 1s (22.1 MB/s)
498s Selecting previously unselected package libblas3:s390x.
498s (Reading database ... 
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(Reading database ... 100%
(Reading database ... 81470 files and directories currently installed.)
498s Preparing to unpack .../00-libblas3_3.12.1-2_s390x.deb ...
498s Unpacking libblas3:s390x (3.12.1-2) ...
498s Selecting previously unselected package libevent-pthreads-2.1-7t64:s390x.
498s Preparing to unpack .../01-libevent-pthreads-2.1-7t64_2.1.12-stable-10_s390x.deb ...
498s Unpacking libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ...
498s Selecting previously unselected package librdmacm1t64:s390x.
498s Preparing to unpack .../02-librdmacm1t64_56.0-4ubuntu1_s390x.deb ...
498s Unpacking librdmacm1t64:s390x (56.0-4ubuntu1) ...
498s Selecting previously unselected package libfabric1:s390x.
498s Preparing to unpack .../03-libfabric1_1.17.0-3.1_s390x.deb ...
498s Unpacking libfabric1:s390x (1.17.0-3.1) ...
498s Selecting previously unselected package libgfortran5:s390x.
498s Preparing to unpack .../04-libgfortran5_15-20250404-0ubuntu1_s390x.deb ...
498s Unpacking libgfortran5:s390x (15-20250404-0ubuntu1) ...
498s Selecting previously unselected package libhwloc15:s390x.
498s Preparing to unpack .../05-libhwloc15_2.12.0-1_s390x.deb ...
498s Unpacking libhwloc15:s390x (2.12.0-1) ...
498s Selecting previously unselected package liblapack3:s390x.
498s Preparing to unpack .../06-liblapack3_3.12.1-2_s390x.deb ...
498s Unpacking liblapack3:s390x (3.12.1-2) ...
498s Selecting previously unselected package libmunge2:s390x.
498s Preparing to unpack .../07-libmunge2_0.5.16-1_s390x.deb ...
498s Unpacking libmunge2:s390x (0.5.16-1) ...
498s Selecting previously unselected package libpciaccess0:s390x.
498s Preparing to unpack .../08-libpciaccess0_0.17-3build1_s390x.deb ...
498s Unpacking libpciaccess0:s390x (0.17-3build1) ...
498s Selecting previously unselected package libxnvctrl0:s390x.
498s Preparing to unpack .../09-libxnvctrl0_510.47.03-0ubuntu4_s390x.deb ...
498s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu4) ...
498s Selecting previously unselected package ocl-icd-libopencl1:s390x.
498s Preparing to unpack .../10-ocl-icd-libopencl1_2.3.2-1build1_s390x.deb ...
498s Unpacking ocl-icd-libopencl1:s390x (2.3.2-1build1) ...
498s Selecting previously unselected package libhwloc-plugins:s390x.
498s Preparing to unpack .../11-libhwloc-plugins_2.12.0-1_s390x.deb ...
498s Unpacking libhwloc-plugins:s390x (2.12.0-1) ...
498s Selecting previously unselected package libpmix2t64:s390x.
498s Preparing to unpack .../12-libpmix2t64_5.0.6-5_s390x.deb ...
498s Unpacking libpmix2t64:s390x (5.0.6-5) ...
498s Selecting previously unselected package libopenmpi40:s390x.
498s Preparing to unpack .../13-libopenmpi40_5.0.7-1_s390x.deb ...
498s Unpacking libopenmpi40:s390x (5.0.7-1) ...
498s Selecting previously unselected package openmpi-common.
498s Preparing to unpack .../14-openmpi-common_5.0.7-1_all.deb ...
498s Unpacking openmpi-common (5.0.7-1) ...
498s Selecting previously unselected package openmpi-bin.
498s Preparing to unpack .../15-openmpi-bin_5.0.7-1_s390x.deb ...
498s Unpacking openmpi-bin (5.0.7-1) ...
498s Selecting previously unselected package mpi-default-bin.
498s Preparing to unpack .../16-mpi-default-bin_1.18_s390x.deb ...
498s Unpacking mpi-default-bin (1.18) ...
498s Selecting previously unselected package libmpich12:s390x.
498s Preparing to unpack .../17-libmpich12_4.3.0-5_s390x.deb ...
498s Unpacking libmpich12:s390x (4.3.0-5) ...
498s Selecting previously unselected package libscalapack-mpich2.2:s390x.
498s Preparing to unpack .../18-libscalapack-mpich2.2_2.2.2-1ubuntu1_s390x.deb ...
498s Unpacking libscalapack-mpich2.2:s390x (2.2.2-1ubuntu1) ...
498s Selecting previously unselected package libslurm42t64.
498s Preparing to unpack .../19-libslurm42t64_24.11.3-2_s390x.deb ...
498s Unpacking libslurm42t64 (24.11.3-2) ...
498s Selecting previously unselected package nwchem-data.
498s Preparing to unpack .../20-nwchem-data_7.2.3-7build1_all.deb ...
498s Unpacking nwchem-data (7.2.3-7build1) ...
498s Selecting previously unselected package hwloc-nox.
498s Preparing to unpack .../21-hwloc-nox_2.12.0-1_s390x.deb ...
498s Unpacking hwloc-nox (2.12.0-1) ...
498s Selecting previously unselected package mpich.
498s Preparing to unpack .../22-mpich_4.3.0-5_s390x.deb ...
498s Unpacking mpich (4.3.0-5) ...
498s Selecting previously unselected package nwchem-mpich.
498s Preparing to unpack .../23-nwchem-mpich_7.2.3-7build1_s390x.deb ...
498s Unpacking nwchem-mpich (7.2.3-7build1) ...
499s Setting up libpciaccess0:s390x (0.17-3build1) ...
499s Setting up libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ...
499s Setting up nwchem-data (7.2.3-7build1) ...
499s Setting up libxnvctrl0:s390x (510.47.03-0ubuntu4) ...
499s Setting up libblas3:s390x (3.12.1-2) ...
499s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
499s Setting up libmunge2:s390x (0.5.16-1) ...
499s Setting up libslurm42t64 (24.11.3-2) ...
499s Setting up libhwloc15:s390x (2.12.0-1) ...
499s Setting up libgfortran5:s390x (15-20250404-0ubuntu1) ...
499s Setting up ocl-icd-libopencl1:s390x (2.3.2-1build1) ...
499s Setting up openmpi-common (5.0.7-1) ...
499s Setting up librdmacm1t64:s390x (56.0-4ubuntu1) ...
499s Setting up libfabric1:s390x (1.17.0-3.1) ...
499s Setting up liblapack3:s390x (3.12.1-2) ...
499s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
499s Setting up hwloc-nox (2.12.0-1) ...
499s Setting up libhwloc-plugins:s390x (2.12.0-1) ...
499s Setting up libpmix2t64:s390x (5.0.6-5) ...
499s Setting up libmpich12:s390x (4.3.0-5) ...
499s Setting up libopenmpi40:s390x (5.0.7-1) ...
499s Setting up mpich (4.3.0-5) ...
499s update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode
499s update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode
499s Setting up openmpi-bin (5.0.7-1) ...
499s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
499s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist
499s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
499s Setting up mpi-default-bin (1.18) ...
499s Setting up libscalapack-mpich2.2:s390x (2.2.2-1ubuntu1) ...
499s Setting up nwchem-mpich (7.2.3-7build1) ...
499s Processing triggers for libc-bin (2.41-6ubuntu1) ...
499s Processing triggers for man-db (2.13.0-1) ...
572s autopkgtest [20:59:14]: test testsuite-mpich: [-----------------------
572s ===== TESTING NWCHEM BUILD FOR mpich =====
572s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation)
572s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation)
572s skipping extra tests on s390x
572s Skipping mpich tests on s390x due to flaky mpich support
572s autopkgtest [20:59:14]: test testsuite-mpich: -----------------------]
573s testsuite-mpich      PASS
573s autopkgtest [20:59:15]: test testsuite-mpich:  - - - - - - - - - - results - - - - - - - - - -
573s autopkgtest [20:59:15]: @@@@@@@@@@@@@@@@@@@@ summary
573s testsuite.sh         PASS
573s testsuite-openmpi    PASS
573s testsuite-mpich      PASS
590s nova [W] Using flock in prodstack6-s390x
590s Creating nova instance adt-questing-s390x-nwchem-20250503-202833-juju-7f2275-prod-proposed-migration-environment-23-053b5f08-4c3e-4095-8dbf-0839cdab47af from image adt/ubuntu-questing-s390x-server-20250503.img (UUID 28f9c1a1-7734-4b43-83da-146791cb698d)...
590s nova [W] Timed out waiting for 492cf43f-d543-4bfd-bde7-5a764bc9fa59 to get deleted.
590s nova [W] Using flock in prodstack6-s390x
590s Creating nova instance adt-questing-s390x-nwchem-20250503-202833-juju-7f2275-prod-proposed-migration-environment-23-053b5f08-4c3e-4095-8dbf-0839cdab47af from image adt/ubuntu-questing-s390x-server-20250503.img (UUID 28f9c1a1-7734-4b43-83da-146791cb698d)...
590s nova [W] Timed out waiting for 0f94ddaf-647d-4da8-aca1-e5af28b5685d to get deleted.
590s nova [W] Using flock in prodstack6-s390x
590s Creating nova instance adt-questing-s390x-nwchem-20250503-202833-juju-7f2275-prod-proposed-migration-environment-23-053b5f08-4c3e-4095-8dbf-0839cdab47af from image adt/ubuntu-questing-s390x-server-20250503.img (UUID 28f9c1a1-7734-4b43-83da-146791cb698d)...
590s nova [W] Timed out waiting for 03435280-2510-4982-b7a8-5224ad0db480 to get deleted.