0s autopkgtest [09:25:53]: starting date and time: 2025-05-02 09:25:53+0000
  0s autopkgtest [09:25:53]: git checkout: 9986aa8c Merge branch 'skia/fix_network_interface' into 'ubuntu/production'
  0s autopkgtest [09:25:53]: host juju-7f2275-prod-proposed-migration-environment-21; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.k0ze5a2i/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3.13 --apt-upgrade nwchem --timeout-short=300 --timeout-copy=20000 --timeout-test=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python3.13/3.13.3-2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-big-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-21@bos03-s390x-6.secgroup --name adt-questing-s390x-nwchem-20250502-092553-juju-7f2275-prod-proposed-migration-environment-21-23485bef-9267-45cc-84a8-8f84682f7d9e --image adt/ubuntu-questing-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-21 --net-id=net_prod-proposed-migration-s390x -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/
151s autopkgtest [09:28:24]: testbed dpkg architecture: s390x
151s autopkgtest [09:28:24]: testbed apt version: 3.0.0
152s autopkgtest [09:28:25]: @@@@@@@@@@@@@@@@@@@@ test bed setup
152s autopkgtest [09:28:25]: testbed release detected to be: None
153s autopkgtest [09:28:26]: updating testbed package index (apt update)
153s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB]
153s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease
153s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease
154s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease
154s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [2076 kB]
154s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [175 kB]
154s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [44.4 kB]
154s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main s390x Packages [208 kB]
154s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x Packages [1079 kB]
154s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse s390x Packages [9148 B]
154s Fetched 3701 kB in 1s (2535 kB/s)
155s Reading package lists...
156s autopkgtest [09:28:29]: upgrading testbed (apt dist-upgrade and autopurge)
156s Reading package lists...
156s Building dependency tree...
156s Reading state information...
156s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
156s Starting 2 pkgProblemResolver with broken count: 0
156s Done
157s Entering ResolveByKeep
157s 
157s Calculating upgrade...
157s The following packages will be upgraded:
157s   htop libpython3.13 libpython3.13-minimal libpython3.13-stdlib nano
157s   python3.13 python3.13-gdbm python3.13-minimal
157s 8 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
157s Need to get 9090 kB of archives.
157s After this operation, 7168 B of additional disk space will be used.
157s Get:1 http://ftpmaster.internal/ubuntu questing-proposed/main s390x python3.13 s390x 3.13.3-2 [739 kB]
158s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libpython3.13 s390x 3.13.3-2 [2517 kB]
158s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libpython3.13-stdlib s390x 3.13.3-2 [2054 kB]
158s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main s390x python3.13-minimal s390x 3.13.3-2 [2377 kB]
158s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libpython3.13-minimal s390x 3.13.3-2 [883 kB]
159s Get:6 http://ftpmaster.internal/ubuntu questing/main s390x nano s390x 8.4-1 [299 kB]
159s Get:7 http://ftpmaster.internal/ubuntu questing/main s390x htop s390x 3.4.1-4 [189 kB]
159s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main s390x python3.13-gdbm s390x 3.13.3-2 [31.8 kB]
159s Fetched 9090 kB in 1s (6140 kB/s)
160s (Reading database ... 
(Reading database ... 5%
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(Reading database ... 15%
(Reading database ... 20%
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(Reading database ... 30%
(Reading database ... 35%
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81472 files and directories currently installed.)
160s Preparing to unpack .../0-python3.13_3.13.3-2_s390x.deb ...
160s Unpacking python3.13 (3.13.3-2) over (3.13.3-1) ...
160s Preparing to unpack .../1-libpython3.13_3.13.3-2_s390x.deb ...
160s Unpacking libpython3.13:s390x (3.13.3-2) over (3.13.3-1) ...
160s Preparing to unpack .../2-libpython3.13-stdlib_3.13.3-2_s390x.deb ...
160s Unpacking libpython3.13-stdlib:s390x (3.13.3-2) over (3.13.3-1) ...
160s Preparing to unpack .../3-python3.13-minimal_3.13.3-2_s390x.deb ...
160s Unpacking python3.13-minimal (3.13.3-2) over (3.13.3-1) ...
160s Preparing to unpack .../4-libpython3.13-minimal_3.13.3-2_s390x.deb ...
160s Unpacking libpython3.13-minimal:s390x (3.13.3-2) over (3.13.3-1) ...
160s Preparing to unpack .../5-nano_8.4-1_s390x.deb ...
160s Unpacking nano (8.4-1) over (8.3-1) ...
161s Preparing to unpack .../6-htop_3.4.1-4_s390x.deb ...
161s Unpacking htop (3.4.1-4) over (3.4.0-2) ...
161s Preparing to unpack .../7-python3.13-gdbm_3.13.3-2_s390x.deb ...
161s Unpacking python3.13-gdbm (3.13.3-2) over (3.13.3-1) ...
161s Setting up htop (3.4.1-4) ...
161s Setting up libpython3.13-minimal:s390x (3.13.3-2) ...
161s Setting up nano (8.4-1) ...
161s Installing new version of config file /etc/nanorc ...
161s Setting up python3.13-minimal (3.13.3-2) ...
161s Setting up libpython3.13-stdlib:s390x (3.13.3-2) ...
161s Setting up python3.13-gdbm (3.13.3-2) ...
161s Setting up libpython3.13:s390x (3.13.3-2) ...
161s Setting up python3.13 (3.13.3-2) ...
162s Processing triggers for systemd (257.4-1ubuntu3) ...
162s Processing triggers for man-db (2.13.0-1) ...
163s Processing triggers for install-info (7.1.1-1) ...
163s Processing triggers for libc-bin (2.41-6ubuntu1) ...
164s Reading package lists...
164s Building dependency tree...
164s Reading state information...
164s Starting pkgProblemResolver with broken count: 0
164s Starting 2 pkgProblemResolver with broken count: 0
164s Done
164s Solving dependencies...
165s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
167s autopkgtest [09:28:40]: testbed running kernel: Linux 6.14.0-15-generic #15-Ubuntu SMP Sun Apr  6 13:39:00 UTC 2025
167s autopkgtest [09:28:40]: @@@@@@@@@@@@@@@@@@@@ apt-source nwchem
201s Get:1 http://ftpmaster.internal/ubuntu questing/universe nwchem 7.2.3-7build1 (dsc) [2834 B]
201s Get:2 http://ftpmaster.internal/ubuntu questing/universe nwchem 7.2.3-7build1 (tar) [168 MB]
201s Get:3 http://ftpmaster.internal/ubuntu questing/universe nwchem 7.2.3-7build1 (diff) [560 kB]
201s gpgv: Signature made Fri Jan  3 11:06:21 2025 UTC
201s gpgv:                using RSA key 568BF22A66337CBFC9A6B9B72C83DBC8E9BD0E37
201s gpgv: Can't check signature: No public key
201s dpkg-source: warning: cannot verify inline signature for ./nwchem_7.2.3-7build1.dsc: no acceptable signature found
233s autopkgtest [09:29:46]: testing package nwchem version 7.2.3-7build1
234s autopkgtest [09:29:47]: build not needed
310s autopkgtest [09:31:03]: test testsuite.sh: preparing testbed
311s Reading package lists...
311s Building dependency tree...
311s Reading state information...
311s Starting pkgProblemResolver with broken count: 0
311s Starting 2 pkgProblemResolver with broken count: 0
311s Done
311s The following NEW packages will be installed:
311s   libblas3 libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libhwloc-plugins
311s   libhwloc15 liblapack3 libmunge2 libopenmpi40 libpciaccess0 libpmix2t64
311s   librdmacm1t64 libscalapack-openmpi2.2 libxnvctrl0 mpi-default-bin nwchem
311s   nwchem-data nwchem-openmpi ocl-icd-libopencl1 openmpi-bin openmpi-common
311s 0 upgraded, 21 newly installed, 0 to remove and 0 not upgraded.
311s Need to get 29.7 MB of archives.
311s After this operation, 150 MB of additional disk space will be used.
311s Get:1 http://ftpmaster.internal/ubuntu questing/main s390x libblas3 s390x 3.12.1-2 [252 kB]
312s Get:2 http://ftpmaster.internal/ubuntu questing/main s390x libevent-pthreads-2.1-7t64 s390x 2.1.12-stable-10 [7870 B]
312s Get:3 http://ftpmaster.internal/ubuntu questing/main s390x librdmacm1t64 s390x 56.0-4ubuntu1 [74.0 kB]
312s Get:4 http://ftpmaster.internal/ubuntu questing/universe s390x libfabric1 s390x 1.17.0-3.1 [558 kB]
312s Get:5 http://ftpmaster.internal/ubuntu questing/main s390x libgfortran5 s390x 15-20250404-0ubuntu1 [621 kB]
312s Get:6 http://ftpmaster.internal/ubuntu questing/universe s390x libhwloc15 s390x 2.12.0-1 [176 kB]
312s Get:7 http://ftpmaster.internal/ubuntu questing/main s390x liblapack3 s390x 3.12.1-2 [2971 kB]
312s Get:8 http://ftpmaster.internal/ubuntu questing/universe s390x libmunge2 s390x 0.5.16-1 [15.2 kB]
312s Get:9 http://ftpmaster.internal/ubuntu questing/main s390x libpciaccess0 s390x 0.17-3build1 [19.0 kB]
312s Get:10 http://ftpmaster.internal/ubuntu questing/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu4 [12.7 kB]
312s Get:11 http://ftpmaster.internal/ubuntu questing/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1build1 [41.1 kB]
312s Get:12 http://ftpmaster.internal/ubuntu questing/universe s390x libhwloc-plugins s390x 2.12.0-1 [16.1 kB]
312s Get:13 http://ftpmaster.internal/ubuntu questing/universe s390x libpmix2t64 s390x 5.0.6-5 [715 kB]
313s Get:14 http://ftpmaster.internal/ubuntu questing/universe s390x libopenmpi40 s390x 5.0.7-1 [2196 kB]
313s Get:15 http://ftpmaster.internal/ubuntu questing/universe s390x openmpi-common all 5.0.7-1 [97.9 kB]
313s Get:16 http://ftpmaster.internal/ubuntu questing/universe s390x openmpi-bin s390x 5.0.7-1 [200 kB]
313s Get:17 http://ftpmaster.internal/ubuntu questing/universe s390x mpi-default-bin s390x 1.18 [2510 B]
313s Get:18 http://ftpmaster.internal/ubuntu questing/universe s390x libscalapack-openmpi2.2 s390x 2.2.2-1ubuntu1 [1992 kB]
313s Get:19 http://ftpmaster.internal/ubuntu questing/universe s390x nwchem-data all 7.2.3-7build1 [6076 kB]
313s Get:20 http://ftpmaster.internal/ubuntu questing/universe s390x nwchem-openmpi s390x 7.2.3-7build1 [13.6 MB]
314s Get:21 http://ftpmaster.internal/ubuntu questing/universe s390x nwchem all 7.2.3-7build1 [17.9 kB]
315s Fetched 29.7 MB in 3s (9552 kB/s)
315s Selecting previously unselected package libblas3:s390x.
315s (Reading database ... 
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(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81472 files and directories currently installed.)
315s Preparing to unpack .../00-libblas3_3.12.1-2_s390x.deb ...
315s Unpacking libblas3:s390x (3.12.1-2) ...
315s Selecting previously unselected package libevent-pthreads-2.1-7t64:s390x.
315s Preparing to unpack .../01-libevent-pthreads-2.1-7t64_2.1.12-stable-10_s390x.deb ...
315s Unpacking libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ...
315s Selecting previously unselected package librdmacm1t64:s390x.
315s Preparing to unpack .../02-librdmacm1t64_56.0-4ubuntu1_s390x.deb ...
315s Unpacking librdmacm1t64:s390x (56.0-4ubuntu1) ...
315s Selecting previously unselected package libfabric1:s390x.
315s Preparing to unpack .../03-libfabric1_1.17.0-3.1_s390x.deb ...
315s Unpacking libfabric1:s390x (1.17.0-3.1) ...
315s Selecting previously unselected package libgfortran5:s390x.
315s Preparing to unpack .../04-libgfortran5_15-20250404-0ubuntu1_s390x.deb ...
315s Unpacking libgfortran5:s390x (15-20250404-0ubuntu1) ...
315s Selecting previously unselected package libhwloc15:s390x.
315s Preparing to unpack .../05-libhwloc15_2.12.0-1_s390x.deb ...
315s Unpacking libhwloc15:s390x (2.12.0-1) ...
315s Selecting previously unselected package liblapack3:s390x.
315s Preparing to unpack .../06-liblapack3_3.12.1-2_s390x.deb ...
315s Unpacking liblapack3:s390x (3.12.1-2) ...
315s Selecting previously unselected package libmunge2:s390x.
315s Preparing to unpack .../07-libmunge2_0.5.16-1_s390x.deb ...
315s Unpacking libmunge2:s390x (0.5.16-1) ...
315s Selecting previously unselected package libpciaccess0:s390x.
315s Preparing to unpack .../08-libpciaccess0_0.17-3build1_s390x.deb ...
315s Unpacking libpciaccess0:s390x (0.17-3build1) ...
315s Selecting previously unselected package libxnvctrl0:s390x.
315s Preparing to unpack .../09-libxnvctrl0_510.47.03-0ubuntu4_s390x.deb ...
315s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu4) ...
315s Selecting previously unselected package ocl-icd-libopencl1:s390x.
315s Preparing to unpack .../10-ocl-icd-libopencl1_2.3.2-1build1_s390x.deb ...
315s Unpacking ocl-icd-libopencl1:s390x (2.3.2-1build1) ...
315s Selecting previously unselected package libhwloc-plugins:s390x.
315s Preparing to unpack .../11-libhwloc-plugins_2.12.0-1_s390x.deb ...
315s Unpacking libhwloc-plugins:s390x (2.12.0-1) ...
315s Selecting previously unselected package libpmix2t64:s390x.
315s Preparing to unpack .../12-libpmix2t64_5.0.6-5_s390x.deb ...
315s Unpacking libpmix2t64:s390x (5.0.6-5) ...
315s Selecting previously unselected package libopenmpi40:s390x.
315s Preparing to unpack .../13-libopenmpi40_5.0.7-1_s390x.deb ...
315s Unpacking libopenmpi40:s390x (5.0.7-1) ...
315s Selecting previously unselected package openmpi-common.
315s Preparing to unpack .../14-openmpi-common_5.0.7-1_all.deb ...
315s Unpacking openmpi-common (5.0.7-1) ...
315s Selecting previously unselected package openmpi-bin.
315s Preparing to unpack .../15-openmpi-bin_5.0.7-1_s390x.deb ...
315s Unpacking openmpi-bin (5.0.7-1) ...
315s Selecting previously unselected package mpi-default-bin.
315s Preparing to unpack .../16-mpi-default-bin_1.18_s390x.deb ...
315s Unpacking mpi-default-bin (1.18) ...
315s Selecting previously unselected package libscalapack-openmpi2.2:s390x.
315s Preparing to unpack .../17-libscalapack-openmpi2.2_2.2.2-1ubuntu1_s390x.deb ...
315s Unpacking libscalapack-openmpi2.2:s390x (2.2.2-1ubuntu1) ...
315s Selecting previously unselected package nwchem-data.
315s Preparing to unpack .../18-nwchem-data_7.2.3-7build1_all.deb ...
315s Unpacking nwchem-data (7.2.3-7build1) ...
315s Selecting previously unselected package nwchem-openmpi.
315s Preparing to unpack .../19-nwchem-openmpi_7.2.3-7build1_s390x.deb ...
315s Unpacking nwchem-openmpi (7.2.3-7build1) ...
315s Selecting previously unselected package nwchem.
315s Preparing to unpack .../20-nwchem_7.2.3-7build1_all.deb ...
315s Unpacking nwchem (7.2.3-7build1) ...
316s Setting up libpciaccess0:s390x (0.17-3build1) ...
316s Setting up libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ...
316s Setting up nwchem-data (7.2.3-7build1) ...
316s Setting up libxnvctrl0:s390x (510.47.03-0ubuntu4) ...
316s Setting up libblas3:s390x (3.12.1-2) ...
316s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
316s Setting up libmunge2:s390x (0.5.16-1) ...
316s Setting up libhwloc15:s390x (2.12.0-1) ...
316s Setting up libgfortran5:s390x (15-20250404-0ubuntu1) ...
316s Setting up ocl-icd-libopencl1:s390x (2.3.2-1build1) ...
316s Setting up openmpi-common (5.0.7-1) ...
316s Setting up librdmacm1t64:s390x (56.0-4ubuntu1) ...
316s Setting up libfabric1:s390x (1.17.0-3.1) ...
316s Setting up liblapack3:s390x (3.12.1-2) ...
316s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
316s Setting up libhwloc-plugins:s390x (2.12.0-1) ...
316s Setting up libpmix2t64:s390x (5.0.6-5) ...
316s Setting up libopenmpi40:s390x (5.0.7-1) ...
316s Setting up openmpi-bin (5.0.7-1) ...
316s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
316s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist
316s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
316s Setting up mpi-default-bin (1.18) ...
316s Setting up libscalapack-openmpi2.2:s390x (2.2.2-1ubuntu1) ...
316s Setting up nwchem-openmpi (7.2.3-7build1) ...
316s Setting up nwchem (7.2.3-7build1) ...
316s Processing triggers for man-db (2.13.0-1) ...
316s Processing triggers for libc-bin (2.41-6ubuntu1) ...
317s autopkgtest [09:31:10]: test testsuite.sh: [-----------------------
317s ===== TESTING NWCHEM WITH DEFAULT MPI INSTALLATION =====
317s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation)
317s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation)
317s skipping extra tests on s390x
317s Skipping mpich tests on s390x due to flaky mpich support
317s autopkgtest [09:31:10]: test testsuite.sh: -----------------------]
318s autopkgtest [09:31:11]: test testsuite.sh:  - - - - - - - - - - results - - - - - - - - - -
318s testsuite.sh         PASS
318s autopkgtest [09:31:11]: test testsuite-openmpi: preparing testbed
412s autopkgtest [09:32:45]: testbed dpkg architecture: s390x
413s autopkgtest [09:32:46]: testbed apt version: 3.0.0
413s autopkgtest [09:32:46]: @@@@@@@@@@@@@@@@@@@@ test bed setup
413s autopkgtest [09:32:46]: testbed release detected to be: questing
414s autopkgtest [09:32:47]: updating testbed package index (apt update)
414s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB]
414s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease
414s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease
414s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease
414s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [2076 kB]
415s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [44.4 kB]
415s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [175 kB]
415s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main s390x Packages [208 kB]
415s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x Packages [1079 kB]
415s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse s390x Packages [9148 B]
415s Fetched 3701 kB in 1s (3037 kB/s)
416s Reading package lists...
416s autopkgtest [09:32:49]: upgrading testbed (apt dist-upgrade and autopurge)
417s Reading package lists...
417s Building dependency tree...
417s Reading state information...
417s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
417s Starting 2 pkgProblemResolver with broken count: 0
417s Done
417s Entering ResolveByKeep
417s 
417s Calculating upgrade...
417s The following packages will be upgraded:
417s   htop libpython3.13 libpython3.13-minimal libpython3.13-stdlib nano
417s   python3.13 python3.13-gdbm python3.13-minimal
417s 8 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
417s Need to get 9090 kB of archives.
417s After this operation, 7168 B of additional disk space will be used.
417s Get:1 http://ftpmaster.internal/ubuntu questing-proposed/main s390x python3.13 s390x 3.13.3-2 [739 kB]
418s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libpython3.13 s390x 3.13.3-2 [2517 kB]
419s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libpython3.13-stdlib s390x 3.13.3-2 [2054 kB]
419s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main s390x python3.13-minimal s390x 3.13.3-2 [2377 kB]
420s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libpython3.13-minimal s390x 3.13.3-2 [883 kB]
420s Get:6 http://ftpmaster.internal/ubuntu questing/main s390x nano s390x 8.4-1 [299 kB]
420s Get:7 http://ftpmaster.internal/ubuntu questing/main s390x htop s390x 3.4.1-4 [189 kB]
420s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main s390x python3.13-gdbm s390x 3.13.3-2 [31.8 kB]
420s Fetched 9090 kB in 3s (3386 kB/s)
420s (Reading database ... 
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(Reading database ... 81472 files and directories currently installed.)
420s Preparing to unpack .../0-python3.13_3.13.3-2_s390x.deb ...
420s Unpacking python3.13 (3.13.3-2) over (3.13.3-1) ...
420s Preparing to unpack .../1-libpython3.13_3.13.3-2_s390x.deb ...
420s Unpacking libpython3.13:s390x (3.13.3-2) over (3.13.3-1) ...
421s Preparing to unpack .../2-libpython3.13-stdlib_3.13.3-2_s390x.deb ...
421s Unpacking libpython3.13-stdlib:s390x (3.13.3-2) over (3.13.3-1) ...
421s Preparing to unpack .../3-python3.13-minimal_3.13.3-2_s390x.deb ...
421s Unpacking python3.13-minimal (3.13.3-2) over (3.13.3-1) ...
421s Preparing to unpack .../4-libpython3.13-minimal_3.13.3-2_s390x.deb ...
421s Unpacking libpython3.13-minimal:s390x (3.13.3-2) over (3.13.3-1) ...
421s Preparing to unpack .../5-nano_8.4-1_s390x.deb ...
421s Unpacking nano (8.4-1) over (8.3-1) ...
421s Preparing to unpack .../6-htop_3.4.1-4_s390x.deb ...
421s Unpacking htop (3.4.1-4) over (3.4.0-2) ...
421s Preparing to unpack .../7-python3.13-gdbm_3.13.3-2_s390x.deb ...
421s Unpacking python3.13-gdbm (3.13.3-2) over (3.13.3-1) ...
421s Setting up htop (3.4.1-4) ...
421s Setting up libpython3.13-minimal:s390x (3.13.3-2) ...
421s Setting up nano (8.4-1) ...
421s Installing new version of config file /etc/nanorc ...
421s Setting up python3.13-minimal (3.13.3-2) ...
422s Setting up libpython3.13-stdlib:s390x (3.13.3-2) ...
422s Setting up python3.13-gdbm (3.13.3-2) ...
422s Setting up libpython3.13:s390x (3.13.3-2) ...
422s Setting up python3.13 (3.13.3-2) ...
422s Processing triggers for systemd (257.4-1ubuntu3) ...
422s Processing triggers for man-db (2.13.0-1) ...
423s Processing triggers for install-info (7.1.1-1) ...
423s Processing triggers for libc-bin (2.41-6ubuntu1) ...
423s Reading package lists...
424s Building dependency tree...
424s Reading state information...
424s Starting pkgProblemResolver with broken count: 0
424s Starting 2 pkgProblemResolver with broken count: 0
424s Done
424s Solving dependencies...
424s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
427s Reading package lists...
427s Building dependency tree...
427s Reading state information...
427s Starting pkgProblemResolver with broken count: 0
427s Starting 2 pkgProblemResolver with broken count: 0
427s Done
427s The following NEW packages will be installed:
427s   libblas3 libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libhwloc-plugins
427s   libhwloc15 liblapack3 libmunge2 libopenmpi40 libpciaccess0 libpmix2t64
427s   librdmacm1t64 libscalapack-openmpi2.2 libxnvctrl0 mpi-default-bin
427s   nwchem-data nwchem-openmpi ocl-icd-libopencl1 openmpi-bin openmpi-common
427s 0 upgraded, 20 newly installed, 0 to remove and 0 not upgraded.
427s Need to get 29.7 MB of archives.
427s After this operation, 150 MB of additional disk space will be used.
427s Get:1 http://ftpmaster.internal/ubuntu questing/main s390x libblas3 s390x 3.12.1-2 [252 kB]
428s Get:2 http://ftpmaster.internal/ubuntu questing/main s390x libevent-pthreads-2.1-7t64 s390x 2.1.12-stable-10 [7870 B]
428s Get:3 http://ftpmaster.internal/ubuntu questing/main s390x librdmacm1t64 s390x 56.0-4ubuntu1 [74.0 kB]
428s Get:4 http://ftpmaster.internal/ubuntu questing/universe s390x libfabric1 s390x 1.17.0-3.1 [558 kB]
428s Get:5 http://ftpmaster.internal/ubuntu questing/main s390x libgfortran5 s390x 15-20250404-0ubuntu1 [621 kB]
428s Get:6 http://ftpmaster.internal/ubuntu questing/universe s390x libhwloc15 s390x 2.12.0-1 [176 kB]
428s Get:7 http://ftpmaster.internal/ubuntu questing/main s390x liblapack3 s390x 3.12.1-2 [2971 kB]
428s Get:8 http://ftpmaster.internal/ubuntu questing/universe s390x libmunge2 s390x 0.5.16-1 [15.2 kB]
428s Get:9 http://ftpmaster.internal/ubuntu questing/main s390x libpciaccess0 s390x 0.17-3build1 [19.0 kB]
428s Get:10 http://ftpmaster.internal/ubuntu questing/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu4 [12.7 kB]
428s Get:11 http://ftpmaster.internal/ubuntu questing/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1build1 [41.1 kB]
428s Get:12 http://ftpmaster.internal/ubuntu questing/universe s390x libhwloc-plugins s390x 2.12.0-1 [16.1 kB]
428s Get:13 http://ftpmaster.internal/ubuntu questing/universe s390x libpmix2t64 s390x 5.0.6-5 [715 kB]
428s Get:14 http://ftpmaster.internal/ubuntu questing/universe s390x libopenmpi40 s390x 5.0.7-1 [2196 kB]
429s Get:15 http://ftpmaster.internal/ubuntu questing/universe s390x openmpi-common all 5.0.7-1 [97.9 kB]
429s Get:16 http://ftpmaster.internal/ubuntu questing/universe s390x openmpi-bin s390x 5.0.7-1 [200 kB]
429s Get:17 http://ftpmaster.internal/ubuntu questing/universe s390x mpi-default-bin s390x 1.18 [2510 B]
429s Get:18 http://ftpmaster.internal/ubuntu questing/universe s390x libscalapack-openmpi2.2 s390x 2.2.2-1ubuntu1 [1992 kB]
429s Get:19 http://ftpmaster.internal/ubuntu questing/universe s390x nwchem-data all 7.2.3-7build1 [6076 kB]
429s Get:20 http://ftpmaster.internal/ubuntu questing/universe s390x nwchem-openmpi s390x 7.2.3-7build1 [13.6 MB]
430s Fetched 29.7 MB in 3s (9625 kB/s)
430s Selecting previously unselected package libblas3:s390x.
430s (Reading database ... 
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(Reading database ... 81472 files and directories currently installed.)
430s Preparing to unpack .../00-libblas3_3.12.1-2_s390x.deb ...
430s Unpacking libblas3:s390x (3.12.1-2) ...
430s Selecting previously unselected package libevent-pthreads-2.1-7t64:s390x.
430s Preparing to unpack .../01-libevent-pthreads-2.1-7t64_2.1.12-stable-10_s390x.deb ...
430s Unpacking libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ...
430s Selecting previously unselected package librdmacm1t64:s390x.
430s Preparing to unpack .../02-librdmacm1t64_56.0-4ubuntu1_s390x.deb ...
430s Unpacking librdmacm1t64:s390x (56.0-4ubuntu1) ...
430s Selecting previously unselected package libfabric1:s390x.
430s Preparing to unpack .../03-libfabric1_1.17.0-3.1_s390x.deb ...
430s Unpacking libfabric1:s390x (1.17.0-3.1) ...
430s Selecting previously unselected package libgfortran5:s390x.
430s Preparing to unpack .../04-libgfortran5_15-20250404-0ubuntu1_s390x.deb ...
430s Unpacking libgfortran5:s390x (15-20250404-0ubuntu1) ...
431s Selecting previously unselected package libhwloc15:s390x.
431s Preparing to unpack .../05-libhwloc15_2.12.0-1_s390x.deb ...
431s Unpacking libhwloc15:s390x (2.12.0-1) ...
431s Selecting previously unselected package liblapack3:s390x.
431s Preparing to unpack .../06-liblapack3_3.12.1-2_s390x.deb ...
431s Unpacking liblapack3:s390x (3.12.1-2) ...
431s Selecting previously unselected package libmunge2:s390x.
431s Preparing to unpack .../07-libmunge2_0.5.16-1_s390x.deb ...
431s Unpacking libmunge2:s390x (0.5.16-1) ...
431s Selecting previously unselected package libpciaccess0:s390x.
431s Preparing to unpack .../08-libpciaccess0_0.17-3build1_s390x.deb ...
431s Unpacking libpciaccess0:s390x (0.17-3build1) ...
431s Selecting previously unselected package libxnvctrl0:s390x.
431s Preparing to unpack .../09-libxnvctrl0_510.47.03-0ubuntu4_s390x.deb ...
431s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu4) ...
431s Selecting previously unselected package ocl-icd-libopencl1:s390x.
431s Preparing to unpack .../10-ocl-icd-libopencl1_2.3.2-1build1_s390x.deb ...
431s Unpacking ocl-icd-libopencl1:s390x (2.3.2-1build1) ...
431s Selecting previously unselected package libhwloc-plugins:s390x.
431s Preparing to unpack .../11-libhwloc-plugins_2.12.0-1_s390x.deb ...
431s Unpacking libhwloc-plugins:s390x (2.12.0-1) ...
431s Selecting previously unselected package libpmix2t64:s390x.
431s Preparing to unpack .../12-libpmix2t64_5.0.6-5_s390x.deb ...
431s Unpacking libpmix2t64:s390x (5.0.6-5) ...
431s Selecting previously unselected package libopenmpi40:s390x.
431s Preparing to unpack .../13-libopenmpi40_5.0.7-1_s390x.deb ...
431s Unpacking libopenmpi40:s390x (5.0.7-1) ...
431s Selecting previously unselected package openmpi-common.
431s Preparing to unpack .../14-openmpi-common_5.0.7-1_all.deb ...
431s Unpacking openmpi-common (5.0.7-1) ...
431s Selecting previously unselected package openmpi-bin.
431s Preparing to unpack .../15-openmpi-bin_5.0.7-1_s390x.deb ...
431s Unpacking openmpi-bin (5.0.7-1) ...
431s Selecting previously unselected package mpi-default-bin.
431s Preparing to unpack .../16-mpi-default-bin_1.18_s390x.deb ...
431s Unpacking mpi-default-bin (1.18) ...
431s Selecting previously unselected package libscalapack-openmpi2.2:s390x.
431s Preparing to unpack .../17-libscalapack-openmpi2.2_2.2.2-1ubuntu1_s390x.deb ...
431s Unpacking libscalapack-openmpi2.2:s390x (2.2.2-1ubuntu1) ...
431s Selecting previously unselected package nwchem-data.
431s Preparing to unpack .../18-nwchem-data_7.2.3-7build1_all.deb ...
431s Unpacking nwchem-data (7.2.3-7build1) ...
431s Selecting previously unselected package nwchem-openmpi.
431s Preparing to unpack .../19-nwchem-openmpi_7.2.3-7build1_s390x.deb ...
431s Unpacking nwchem-openmpi (7.2.3-7build1) ...
431s Setting up libpciaccess0:s390x (0.17-3build1) ...
431s Setting up libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ...
431s Setting up nwchem-data (7.2.3-7build1) ...
431s Setting up libxnvctrl0:s390x (510.47.03-0ubuntu4) ...
431s Setting up libblas3:s390x (3.12.1-2) ...
431s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
431s Setting up libmunge2:s390x (0.5.16-1) ...
431s Setting up libhwloc15:s390x (2.12.0-1) ...
431s Setting up libgfortran5:s390x (15-20250404-0ubuntu1) ...
431s Setting up ocl-icd-libopencl1:s390x (2.3.2-1build1) ...
431s Setting up openmpi-common (5.0.7-1) ...
431s Setting up librdmacm1t64:s390x (56.0-4ubuntu1) ...
431s Setting up libfabric1:s390x (1.17.0-3.1) ...
431s Setting up liblapack3:s390x (3.12.1-2) ...
431s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
431s Setting up libhwloc-plugins:s390x (2.12.0-1) ...
431s Setting up libpmix2t64:s390x (5.0.6-5) ...
431s Setting up libopenmpi40:s390x (5.0.7-1) ...
431s Setting up openmpi-bin (5.0.7-1) ...
431s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
431s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist
431s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
431s Setting up mpi-default-bin (1.18) ...
431s Setting up libscalapack-openmpi2.2:s390x (2.2.2-1ubuntu1) ...
431s Setting up nwchem-openmpi (7.2.3-7build1) ...
431s Processing triggers for man-db (2.13.0-1) ...
432s Processing triggers for libc-bin (2.41-6ubuntu1) ...
574s autopkgtest [09:35:27]: test testsuite-openmpi: [-----------------------
575s ===== TESTING NWCHEM BUILD FOR openmpi =====
575s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation)
575s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation)
575s skipping extra tests on s390x
575s Skipping mpich tests on s390x due to flaky mpich support
575s autopkgtest [09:35:28]: test testsuite-openmpi: -----------------------]
575s testsuite-openmpi    PASS
575s autopkgtest [09:35:28]: test testsuite-openmpi:  - - - - - - - - - - results - - - - - - - - - -
576s autopkgtest [09:35:29]: test testsuite-mpich: preparing testbed
673s autopkgtest [09:37:06]: testbed dpkg architecture: s390x
673s autopkgtest [09:37:06]: testbed apt version: 3.0.0
673s autopkgtest [09:37:06]: @@@@@@@@@@@@@@@@@@@@ test bed setup
673s autopkgtest [09:37:06]: testbed release detected to be: questing
674s autopkgtest [09:37:07]: updating testbed package index (apt update)
674s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB]
675s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease
675s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease
675s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease
675s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [175 kB]
675s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [2076 kB]
675s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [44.4 kB]
675s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main s390x Packages [208 kB]
675s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x Packages [1079 kB]
675s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse s390x Packages [9148 B]
675s Fetched 3701 kB in 1s (3068 kB/s)
676s Reading package lists...
677s autopkgtest [09:37:10]: upgrading testbed (apt dist-upgrade and autopurge)
677s Reading package lists...
677s Building dependency tree...
677s Reading state information...
677s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
677s Starting 2 pkgProblemResolver with broken count: 0
677s Done
677s Entering ResolveByKeep
677s 
678s Calculating upgrade...
678s The following packages will be upgraded:
678s   htop libpython3.13 libpython3.13-minimal libpython3.13-stdlib nano
678s   python3.13 python3.13-gdbm python3.13-minimal
678s 8 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
678s Need to get 9090 kB of archives.
678s After this operation, 7168 B of additional disk space will be used.
678s Get:1 http://ftpmaster.internal/ubuntu questing-proposed/main s390x python3.13 s390x 3.13.3-2 [739 kB]
679s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libpython3.13 s390x 3.13.3-2 [2517 kB]
679s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libpython3.13-stdlib s390x 3.13.3-2 [2054 kB]
679s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main s390x python3.13-minimal s390x 3.13.3-2 [2377 kB]
679s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libpython3.13-minimal s390x 3.13.3-2 [883 kB]
679s Get:6 http://ftpmaster.internal/ubuntu questing/main s390x nano s390x 8.4-1 [299 kB]
679s Get:7 http://ftpmaster.internal/ubuntu questing/main s390x htop s390x 3.4.1-4 [189 kB]
679s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main s390x python3.13-gdbm s390x 3.13.3-2 [31.8 kB]
679s Fetched 9090 kB in 1s (9883 kB/s)
680s (Reading database ... 
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81472 files and directories currently installed.)
680s Preparing to unpack .../0-python3.13_3.13.3-2_s390x.deb ...
680s Unpacking python3.13 (3.13.3-2) over (3.13.3-1) ...
680s Preparing to unpack .../1-libpython3.13_3.13.3-2_s390x.deb ...
680s Unpacking libpython3.13:s390x (3.13.3-2) over (3.13.3-1) ...
680s Preparing to unpack .../2-libpython3.13-stdlib_3.13.3-2_s390x.deb ...
680s Unpacking libpython3.13-stdlib:s390x (3.13.3-2) over (3.13.3-1) ...
680s Preparing to unpack .../3-python3.13-minimal_3.13.3-2_s390x.deb ...
680s Unpacking python3.13-minimal (3.13.3-2) over (3.13.3-1) ...
680s Preparing to unpack .../4-libpython3.13-minimal_3.13.3-2_s390x.deb ...
680s Unpacking libpython3.13-minimal:s390x (3.13.3-2) over (3.13.3-1) ...
680s Preparing to unpack .../5-nano_8.4-1_s390x.deb ...
680s Unpacking nano (8.4-1) over (8.3-1) ...
680s Preparing to unpack .../6-htop_3.4.1-4_s390x.deb ...
680s Unpacking htop (3.4.1-4) over (3.4.0-2) ...
680s Preparing to unpack .../7-python3.13-gdbm_3.13.3-2_s390x.deb ...
680s Unpacking python3.13-gdbm (3.13.3-2) over (3.13.3-1) ...
680s Setting up htop (3.4.1-4) ...
680s Setting up libpython3.13-minimal:s390x (3.13.3-2) ...
680s Setting up nano (8.4-1) ...
680s Installing new version of config file /etc/nanorc ...
680s Setting up python3.13-minimal (3.13.3-2) ...
681s Setting up libpython3.13-stdlib:s390x (3.13.3-2) ...
681s Setting up python3.13-gdbm (3.13.3-2) ...
681s Setting up libpython3.13:s390x (3.13.3-2) ...
681s Setting up python3.13 (3.13.3-2) ...
682s Processing triggers for systemd (257.4-1ubuntu3) ...
682s Processing triggers for man-db (2.13.0-1) ...
683s Processing triggers for install-info (7.1.1-1) ...
683s Processing triggers for libc-bin (2.41-6ubuntu1) ...
683s Reading package lists...
684s Building dependency tree...
684s Reading state information...
684s Starting pkgProblemResolver with broken count: 0
684s Starting 2 pkgProblemResolver with broken count: 0
684s Done
684s Solving dependencies...
684s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
687s Reading package lists...
687s Building dependency tree...
687s Reading state information...
687s Starting pkgProblemResolver with broken count: 0
687s Starting 2 pkgProblemResolver with broken count: 0
687s Done
687s The following NEW packages will be installed:
687s   hwloc-nox libblas3 libevent-pthreads-2.1-7t64 libfabric1 libgfortran5
687s   libhwloc-plugins libhwloc15 liblapack3 libmpich12 libmunge2 libopenmpi40
687s   libpciaccess0 libpmix2t64 librdmacm1t64 libscalapack-mpich2.2 libslurm42t64
687s   libxnvctrl0 mpi-default-bin mpich nwchem-data nwchem-mpich
687s   ocl-icd-libopencl1 openmpi-bin openmpi-common
687s 0 upgraded, 24 newly installed, 0 to remove and 0 not upgraded.
687s Need to get 32.5 MB of archives.
687s After this operation, 159 MB of additional disk space will be used.
687s Get:1 http://ftpmaster.internal/ubuntu questing/main s390x libblas3 s390x 3.12.1-2 [252 kB]
688s Get:2 http://ftpmaster.internal/ubuntu questing/main s390x libevent-pthreads-2.1-7t64 s390x 2.1.12-stable-10 [7870 B]
688s Get:3 http://ftpmaster.internal/ubuntu questing/main s390x librdmacm1t64 s390x 56.0-4ubuntu1 [74.0 kB]
688s Get:4 http://ftpmaster.internal/ubuntu questing/universe s390x libfabric1 s390x 1.17.0-3.1 [558 kB]
688s Get:5 http://ftpmaster.internal/ubuntu questing/main s390x libgfortran5 s390x 15-20250404-0ubuntu1 [621 kB]
688s Get:6 http://ftpmaster.internal/ubuntu questing/universe s390x libhwloc15 s390x 2.12.0-1 [176 kB]
688s Get:7 http://ftpmaster.internal/ubuntu questing/main s390x liblapack3 s390x 3.12.1-2 [2971 kB]
688s Get:8 http://ftpmaster.internal/ubuntu questing/universe s390x libmunge2 s390x 0.5.16-1 [15.2 kB]
688s Get:9 http://ftpmaster.internal/ubuntu questing/main s390x libpciaccess0 s390x 0.17-3build1 [19.0 kB]
688s Get:10 http://ftpmaster.internal/ubuntu questing/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu4 [12.7 kB]
688s Get:11 http://ftpmaster.internal/ubuntu questing/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1build1 [41.1 kB]
688s Get:12 http://ftpmaster.internal/ubuntu questing/universe s390x libhwloc-plugins s390x 2.12.0-1 [16.1 kB]
688s Get:13 http://ftpmaster.internal/ubuntu questing/universe s390x libpmix2t64 s390x 5.0.6-5 [715 kB]
688s Get:14 http://ftpmaster.internal/ubuntu questing/universe s390x libopenmpi40 s390x 5.0.7-1 [2196 kB]
688s Get:15 http://ftpmaster.internal/ubuntu questing/universe s390x openmpi-common all 5.0.7-1 [97.9 kB]
688s Get:16 http://ftpmaster.internal/ubuntu questing/universe s390x openmpi-bin s390x 5.0.7-1 [200 kB]
688s Get:17 http://ftpmaster.internal/ubuntu questing/universe s390x mpi-default-bin s390x 1.18 [2510 B]
688s Get:18 http://ftpmaster.internal/ubuntu questing/universe s390x libmpich12 s390x 4.2.1-5 [1763 kB]
688s Get:19 http://ftpmaster.internal/ubuntu questing/universe s390x libscalapack-mpich2.2 s390x 2.2.2-1ubuntu1 [1985 kB]
688s Get:20 http://ftpmaster.internal/ubuntu questing/universe s390x libslurm42t64 s390x 24.11.3-2 [628 kB]
688s Get:21 http://ftpmaster.internal/ubuntu questing/universe s390x nwchem-data all 7.2.3-7build1 [6076 kB]
688s Get:22 http://ftpmaster.internal/ubuntu questing/universe s390x hwloc-nox s390x 2.12.0-1 [224 kB]
688s Get:23 http://ftpmaster.internal/ubuntu questing/universe s390x mpich s390x 4.2.1-5 [212 kB]
688s Get:24 http://ftpmaster.internal/ubuntu questing/universe s390x nwchem-mpich s390x 7.2.3-7build1 [13.6 MB]
689s Fetched 32.5 MB in 2s (17.1 MB/s)
689s Selecting previously unselected package libblas3:s390x.
689s (Reading database ... 
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(Reading database ... 81472 files and directories currently installed.)
689s Preparing to unpack .../00-libblas3_3.12.1-2_s390x.deb ...
689s Unpacking libblas3:s390x (3.12.1-2) ...
689s Selecting previously unselected package libevent-pthreads-2.1-7t64:s390x.
689s Preparing to unpack .../01-libevent-pthreads-2.1-7t64_2.1.12-stable-10_s390x.deb ...
689s Unpacking libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ...
689s Selecting previously unselected package librdmacm1t64:s390x.
689s Preparing to unpack .../02-librdmacm1t64_56.0-4ubuntu1_s390x.deb ...
689s Unpacking librdmacm1t64:s390x (56.0-4ubuntu1) ...
689s Selecting previously unselected package libfabric1:s390x.
689s Preparing to unpack .../03-libfabric1_1.17.0-3.1_s390x.deb ...
689s Unpacking libfabric1:s390x (1.17.0-3.1) ...
689s Selecting previously unselected package libgfortran5:s390x.
689s Preparing to unpack .../04-libgfortran5_15-20250404-0ubuntu1_s390x.deb ...
689s Unpacking libgfortran5:s390x (15-20250404-0ubuntu1) ...
689s Selecting previously unselected package libhwloc15:s390x.
689s Preparing to unpack .../05-libhwloc15_2.12.0-1_s390x.deb ...
689s Unpacking libhwloc15:s390x (2.12.0-1) ...
689s Selecting previously unselected package liblapack3:s390x.
689s Preparing to unpack .../06-liblapack3_3.12.1-2_s390x.deb ...
689s Unpacking liblapack3:s390x (3.12.1-2) ...
689s Selecting previously unselected package libmunge2:s390x.
689s Preparing to unpack .../07-libmunge2_0.5.16-1_s390x.deb ...
689s Unpacking libmunge2:s390x (0.5.16-1) ...
690s Selecting previously unselected package libpciaccess0:s390x.
690s Preparing to unpack .../08-libpciaccess0_0.17-3build1_s390x.deb ...
690s Unpacking libpciaccess0:s390x (0.17-3build1) ...
690s Selecting previously unselected package libxnvctrl0:s390x.
690s Preparing to unpack .../09-libxnvctrl0_510.47.03-0ubuntu4_s390x.deb ...
690s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu4) ...
690s Selecting previously unselected package ocl-icd-libopencl1:s390x.
690s Preparing to unpack .../10-ocl-icd-libopencl1_2.3.2-1build1_s390x.deb ...
690s Unpacking ocl-icd-libopencl1:s390x (2.3.2-1build1) ...
690s Selecting previously unselected package libhwloc-plugins:s390x.
690s Preparing to unpack .../11-libhwloc-plugins_2.12.0-1_s390x.deb ...
690s Unpacking libhwloc-plugins:s390x (2.12.0-1) ...
690s Selecting previously unselected package libpmix2t64:s390x.
690s Preparing to unpack .../12-libpmix2t64_5.0.6-5_s390x.deb ...
690s Unpacking libpmix2t64:s390x (5.0.6-5) ...
690s Selecting previously unselected package libopenmpi40:s390x.
690s Preparing to unpack .../13-libopenmpi40_5.0.7-1_s390x.deb ...
690s Unpacking libopenmpi40:s390x (5.0.7-1) ...
690s Selecting previously unselected package openmpi-common.
690s Preparing to unpack .../14-openmpi-common_5.0.7-1_all.deb ...
690s Unpacking openmpi-common (5.0.7-1) ...
690s Selecting previously unselected package openmpi-bin.
690s Preparing to unpack .../15-openmpi-bin_5.0.7-1_s390x.deb ...
690s Unpacking openmpi-bin (5.0.7-1) ...
690s Selecting previously unselected package mpi-default-bin.
690s Preparing to unpack .../16-mpi-default-bin_1.18_s390x.deb ...
690s Unpacking mpi-default-bin (1.18) ...
690s Selecting previously unselected package libmpich12:s390x.
690s Preparing to unpack .../17-libmpich12_4.2.1-5_s390x.deb ...
690s Unpacking libmpich12:s390x (4.2.1-5) ...
690s Selecting previously unselected package libscalapack-mpich2.2:s390x.
690s Preparing to unpack .../18-libscalapack-mpich2.2_2.2.2-1ubuntu1_s390x.deb ...
690s Unpacking libscalapack-mpich2.2:s390x (2.2.2-1ubuntu1) ...
690s Selecting previously unselected package libslurm42t64.
690s Preparing to unpack .../19-libslurm42t64_24.11.3-2_s390x.deb ...
690s Unpacking libslurm42t64 (24.11.3-2) ...
690s Selecting previously unselected package nwchem-data.
690s Preparing to unpack .../20-nwchem-data_7.2.3-7build1_all.deb ...
690s Unpacking nwchem-data (7.2.3-7build1) ...
690s Selecting previously unselected package hwloc-nox.
690s Preparing to unpack .../21-hwloc-nox_2.12.0-1_s390x.deb ...
690s Unpacking hwloc-nox (2.12.0-1) ...
690s Selecting previously unselected package mpich.
690s Preparing to unpack .../22-mpich_4.2.1-5_s390x.deb ...
690s Unpacking mpich (4.2.1-5) ...
690s Selecting previously unselected package nwchem-mpich.
690s Preparing to unpack .../23-nwchem-mpich_7.2.3-7build1_s390x.deb ...
690s Unpacking nwchem-mpich (7.2.3-7build1) ...
690s Setting up libpciaccess0:s390x (0.17-3build1) ...
690s Setting up libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ...
690s Setting up nwchem-data (7.2.3-7build1) ...
690s Setting up libxnvctrl0:s390x (510.47.03-0ubuntu4) ...
690s Setting up libblas3:s390x (3.12.1-2) ...
690s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
690s Setting up libmunge2:s390x (0.5.16-1) ...
690s Setting up libslurm42t64 (24.11.3-2) ...
690s Setting up libhwloc15:s390x (2.12.0-1) ...
690s Setting up libgfortran5:s390x (15-20250404-0ubuntu1) ...
690s Setting up libmpich12:s390x (4.2.1-5) ...
690s Setting up ocl-icd-libopencl1:s390x (2.3.2-1build1) ...
690s Setting up openmpi-common (5.0.7-1) ...
690s Setting up librdmacm1t64:s390x (56.0-4ubuntu1) ...
690s Setting up libfabric1:s390x (1.17.0-3.1) ...
690s Setting up liblapack3:s390x (3.12.1-2) ...
690s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
690s Setting up hwloc-nox (2.12.0-1) ...
690s Setting up libhwloc-plugins:s390x (2.12.0-1) ...
690s Setting up libpmix2t64:s390x (5.0.6-5) ...
690s Setting up libopenmpi40:s390x (5.0.7-1) ...
690s Setting up mpich (4.2.1-5) ...
690s update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode
690s update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode
690s Setting up openmpi-bin (5.0.7-1) ...
690s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
690s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist
690s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
690s Setting up mpi-default-bin (1.18) ...
690s Setting up libscalapack-mpich2.2:s390x (2.2.2-1ubuntu1) ...
690s Setting up nwchem-mpich (7.2.3-7build1) ...
690s Processing triggers for libc-bin (2.41-6ubuntu1) ...
690s Processing triggers for man-db (2.13.0-1) ...
804s autopkgtest [09:39:17]: test testsuite-mpich: [-----------------------
804s ===== TESTING NWCHEM BUILD FOR mpich =====
804s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation)
804s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation)
804s skipping extra tests on s390x
804s Skipping mpich tests on s390x due to flaky mpich support
804s autopkgtest [09:39:17]: test testsuite-mpich: -----------------------]
805s testsuite-mpich      PASS
805s autopkgtest [09:39:18]: test testsuite-mpich:  - - - - - - - - - - results - - - - - - - - - -
805s autopkgtest [09:39:18]: @@@@@@@@@@@@@@@@@@@@ summary
805s testsuite.sh         PASS
805s testsuite-openmpi    PASS
805s testsuite-mpich      PASS
823s nova [W] Using flock in prodstack6-s390x
823s Creating nova instance adt-questing-s390x-nwchem-20250502-092553-juju-7f2275-prod-proposed-migration-environment-21-23485bef-9267-45cc-84a8-8f84682f7d9e from image adt/ubuntu-questing-s390x-server-20250502.img (UUID 632ecfca-a19d-4f3a-af48-b7883fa0ccf2)...
823s nova [W] Timed out waiting for 3146a725-8513-4423-9b3a-dc5d697f22fd to get deleted.
823s nova [W] Using flock in prodstack6-s390x
823s Creating nova instance adt-questing-s390x-nwchem-20250502-092553-juju-7f2275-prod-proposed-migration-environment-21-23485bef-9267-45cc-84a8-8f84682f7d9e from image adt/ubuntu-questing-s390x-server-20250502.img (UUID 632ecfca-a19d-4f3a-af48-b7883fa0ccf2)...
823s nova [W] Timed out waiting for 04a16921-76d5-4141-b72d-d62ed8ee401e to get deleted.
823s nova [W] Using flock in prodstack6-s390x
823s Creating nova instance adt-questing-s390x-nwchem-20250502-092553-juju-7f2275-prod-proposed-migration-environment-21-23485bef-9267-45cc-84a8-8f84682f7d9e from image adt/ubuntu-questing-s390x-server-20250502.img (UUID 632ecfca-a19d-4f3a-af48-b7883fa0ccf2)...
823s nova [W] Timed out waiting for d4121f9c-2d44-4be5-9101-0c465674c8c2 to get deleted.