0s autopkgtest [09:25:53]: starting date and time: 2025-05-02 09:25:53+0000 0s autopkgtest [09:25:53]: git checkout: 9986aa8c Merge branch 'skia/fix_network_interface' into 'ubuntu/production' 0s autopkgtest [09:25:53]: host juju-7f2275-prod-proposed-migration-environment-21; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.k0ze5a2i/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3.13 --apt-upgrade nwchem --timeout-short=300 --timeout-copy=20000 --timeout-test=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python3.13/3.13.3-2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-big-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-21@bos03-s390x-6.secgroup --name adt-questing-s390x-nwchem-20250502-092553-juju-7f2275-prod-proposed-migration-environment-21-23485bef-9267-45cc-84a8-8f84682f7d9e --image adt/ubuntu-questing-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-21 --net-id=net_prod-proposed-migration-s390x -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 151s autopkgtest [09:28:24]: testbed dpkg architecture: s390x 151s autopkgtest [09:28:24]: testbed apt version: 3.0.0 152s autopkgtest [09:28:25]: @@@@@@@@@@@@@@@@@@@@ test bed setup 152s autopkgtest [09:28:25]: testbed release detected to be: None 153s autopkgtest [09:28:26]: updating testbed package index (apt update) 153s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB] 153s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 153s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 154s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 154s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [2076 kB] 154s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [175 kB] 154s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [44.4 kB] 154s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main s390x Packages [208 kB] 154s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x Packages [1079 kB] 154s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse s390x Packages [9148 B] 154s Fetched 3701 kB in 1s (2535 kB/s) 155s Reading package lists... 156s autopkgtest [09:28:29]: upgrading testbed (apt dist-upgrade and autopurge) 156s Reading package lists... 156s Building dependency tree... 156s Reading state information... 156s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 156s Starting 2 pkgProblemResolver with broken count: 0 156s Done 157s Entering ResolveByKeep 157s 157s Calculating upgrade... 157s The following packages will be upgraded: 157s htop libpython3.13 libpython3.13-minimal libpython3.13-stdlib nano 157s python3.13 python3.13-gdbm python3.13-minimal 157s 8 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 157s Need to get 9090 kB of archives. 157s After this operation, 7168 B of additional disk space will be used. 157s Get:1 http://ftpmaster.internal/ubuntu questing-proposed/main s390x python3.13 s390x 3.13.3-2 [739 kB] 158s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libpython3.13 s390x 3.13.3-2 [2517 kB] 158s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libpython3.13-stdlib s390x 3.13.3-2 [2054 kB] 158s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main s390x python3.13-minimal s390x 3.13.3-2 [2377 kB] 158s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libpython3.13-minimal s390x 3.13.3-2 [883 kB] 159s Get:6 http://ftpmaster.internal/ubuntu questing/main s390x nano s390x 8.4-1 [299 kB] 159s Get:7 http://ftpmaster.internal/ubuntu questing/main s390x htop s390x 3.4.1-4 [189 kB] 159s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main s390x python3.13-gdbm s390x 3.13.3-2 [31.8 kB] 159s Fetched 9090 kB in 1s (6140 kB/s) 160s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81472 files and directories currently installed.) 160s Preparing to unpack .../0-python3.13_3.13.3-2_s390x.deb ... 160s Unpacking python3.13 (3.13.3-2) over (3.13.3-1) ... 160s Preparing to unpack .../1-libpython3.13_3.13.3-2_s390x.deb ... 160s Unpacking libpython3.13:s390x (3.13.3-2) over (3.13.3-1) ... 160s Preparing to unpack .../2-libpython3.13-stdlib_3.13.3-2_s390x.deb ... 160s Unpacking libpython3.13-stdlib:s390x (3.13.3-2) over (3.13.3-1) ... 160s Preparing to unpack .../3-python3.13-minimal_3.13.3-2_s390x.deb ... 160s Unpacking python3.13-minimal (3.13.3-2) over (3.13.3-1) ... 160s Preparing to unpack .../4-libpython3.13-minimal_3.13.3-2_s390x.deb ... 160s Unpacking libpython3.13-minimal:s390x (3.13.3-2) over (3.13.3-1) ... 160s Preparing to unpack .../5-nano_8.4-1_s390x.deb ... 160s Unpacking nano (8.4-1) over (8.3-1) ... 161s Preparing to unpack .../6-htop_3.4.1-4_s390x.deb ... 161s Unpacking htop (3.4.1-4) over (3.4.0-2) ... 161s Preparing to unpack .../7-python3.13-gdbm_3.13.3-2_s390x.deb ... 161s Unpacking python3.13-gdbm (3.13.3-2) over (3.13.3-1) ... 161s Setting up htop (3.4.1-4) ... 161s Setting up libpython3.13-minimal:s390x (3.13.3-2) ... 161s Setting up nano (8.4-1) ... 161s Installing new version of config file /etc/nanorc ... 161s Setting up python3.13-minimal (3.13.3-2) ... 161s Setting up libpython3.13-stdlib:s390x (3.13.3-2) ... 161s Setting up python3.13-gdbm (3.13.3-2) ... 161s Setting up libpython3.13:s390x (3.13.3-2) ... 161s Setting up python3.13 (3.13.3-2) ... 162s Processing triggers for systemd (257.4-1ubuntu3) ... 162s Processing triggers for man-db (2.13.0-1) ... 163s Processing triggers for install-info (7.1.1-1) ... 163s Processing triggers for libc-bin (2.41-6ubuntu1) ... 164s Reading package lists... 164s Building dependency tree... 164s Reading state information... 164s Starting pkgProblemResolver with broken count: 0 164s Starting 2 pkgProblemResolver with broken count: 0 164s Done 164s Solving dependencies... 165s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 167s autopkgtest [09:28:40]: testbed running kernel: Linux 6.14.0-15-generic #15-Ubuntu SMP Sun Apr 6 13:39:00 UTC 2025 167s autopkgtest [09:28:40]: @@@@@@@@@@@@@@@@@@@@ apt-source nwchem 201s Get:1 http://ftpmaster.internal/ubuntu questing/universe nwchem 7.2.3-7build1 (dsc) [2834 B] 201s Get:2 http://ftpmaster.internal/ubuntu questing/universe nwchem 7.2.3-7build1 (tar) [168 MB] 201s Get:3 http://ftpmaster.internal/ubuntu questing/universe nwchem 7.2.3-7build1 (diff) [560 kB] 201s gpgv: Signature made Fri Jan 3 11:06:21 2025 UTC 201s gpgv: using RSA key 568BF22A66337CBFC9A6B9B72C83DBC8E9BD0E37 201s gpgv: Can't check signature: No public key 201s dpkg-source: warning: cannot verify inline signature for ./nwchem_7.2.3-7build1.dsc: no acceptable signature found 233s autopkgtest [09:29:46]: testing package nwchem version 7.2.3-7build1 234s autopkgtest [09:29:47]: build not needed 310s autopkgtest [09:31:03]: test testsuite.sh: preparing testbed 311s Reading package lists... 311s Building dependency tree... 311s Reading state information... 311s Starting pkgProblemResolver with broken count: 0 311s Starting 2 pkgProblemResolver with broken count: 0 311s Done 311s The following NEW packages will be installed: 311s libblas3 libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libhwloc-plugins 311s libhwloc15 liblapack3 libmunge2 libopenmpi40 libpciaccess0 libpmix2t64 311s librdmacm1t64 libscalapack-openmpi2.2 libxnvctrl0 mpi-default-bin nwchem 311s nwchem-data nwchem-openmpi ocl-icd-libopencl1 openmpi-bin openmpi-common 311s 0 upgraded, 21 newly installed, 0 to remove and 0 not upgraded. 311s Need to get 29.7 MB of archives. 311s After this operation, 150 MB of additional disk space will be used. 311s Get:1 http://ftpmaster.internal/ubuntu questing/main s390x libblas3 s390x 3.12.1-2 [252 kB] 312s Get:2 http://ftpmaster.internal/ubuntu questing/main s390x libevent-pthreads-2.1-7t64 s390x 2.1.12-stable-10 [7870 B] 312s Get:3 http://ftpmaster.internal/ubuntu questing/main s390x librdmacm1t64 s390x 56.0-4ubuntu1 [74.0 kB] 312s Get:4 http://ftpmaster.internal/ubuntu questing/universe s390x libfabric1 s390x 1.17.0-3.1 [558 kB] 312s Get:5 http://ftpmaster.internal/ubuntu questing/main s390x libgfortran5 s390x 15-20250404-0ubuntu1 [621 kB] 312s Get:6 http://ftpmaster.internal/ubuntu questing/universe s390x libhwloc15 s390x 2.12.0-1 [176 kB] 312s Get:7 http://ftpmaster.internal/ubuntu questing/main s390x liblapack3 s390x 3.12.1-2 [2971 kB] 312s Get:8 http://ftpmaster.internal/ubuntu questing/universe s390x libmunge2 s390x 0.5.16-1 [15.2 kB] 312s Get:9 http://ftpmaster.internal/ubuntu questing/main s390x libpciaccess0 s390x 0.17-3build1 [19.0 kB] 312s Get:10 http://ftpmaster.internal/ubuntu questing/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu4 [12.7 kB] 312s Get:11 http://ftpmaster.internal/ubuntu questing/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1build1 [41.1 kB] 312s Get:12 http://ftpmaster.internal/ubuntu questing/universe s390x libhwloc-plugins s390x 2.12.0-1 [16.1 kB] 312s Get:13 http://ftpmaster.internal/ubuntu questing/universe s390x libpmix2t64 s390x 5.0.6-5 [715 kB] 313s Get:14 http://ftpmaster.internal/ubuntu questing/universe s390x libopenmpi40 s390x 5.0.7-1 [2196 kB] 313s Get:15 http://ftpmaster.internal/ubuntu questing/universe s390x openmpi-common all 5.0.7-1 [97.9 kB] 313s Get:16 http://ftpmaster.internal/ubuntu questing/universe s390x openmpi-bin s390x 5.0.7-1 [200 kB] 313s Get:17 http://ftpmaster.internal/ubuntu questing/universe s390x mpi-default-bin s390x 1.18 [2510 B] 313s Get:18 http://ftpmaster.internal/ubuntu questing/universe s390x libscalapack-openmpi2.2 s390x 2.2.2-1ubuntu1 [1992 kB] 313s Get:19 http://ftpmaster.internal/ubuntu questing/universe s390x nwchem-data all 7.2.3-7build1 [6076 kB] 313s Get:20 http://ftpmaster.internal/ubuntu questing/universe s390x nwchem-openmpi s390x 7.2.3-7build1 [13.6 MB] 314s Get:21 http://ftpmaster.internal/ubuntu questing/universe s390x nwchem all 7.2.3-7build1 [17.9 kB] 315s Fetched 29.7 MB in 3s (9552 kB/s) 315s Selecting previously unselected package libblas3:s390x. 315s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81472 files and directories currently installed.) 315s Preparing to unpack .../00-libblas3_3.12.1-2_s390x.deb ... 315s Unpacking libblas3:s390x (3.12.1-2) ... 315s Selecting previously unselected package libevent-pthreads-2.1-7t64:s390x. 315s Preparing to unpack .../01-libevent-pthreads-2.1-7t64_2.1.12-stable-10_s390x.deb ... 315s Unpacking libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ... 315s Selecting previously unselected package librdmacm1t64:s390x. 315s Preparing to unpack .../02-librdmacm1t64_56.0-4ubuntu1_s390x.deb ... 315s Unpacking librdmacm1t64:s390x (56.0-4ubuntu1) ... 315s Selecting previously unselected package libfabric1:s390x. 315s Preparing to unpack .../03-libfabric1_1.17.0-3.1_s390x.deb ... 315s Unpacking libfabric1:s390x (1.17.0-3.1) ... 315s Selecting previously unselected package libgfortran5:s390x. 315s Preparing to unpack .../04-libgfortran5_15-20250404-0ubuntu1_s390x.deb ... 315s Unpacking libgfortran5:s390x (15-20250404-0ubuntu1) ... 315s Selecting previously unselected package libhwloc15:s390x. 315s Preparing to unpack .../05-libhwloc15_2.12.0-1_s390x.deb ... 315s Unpacking libhwloc15:s390x (2.12.0-1) ... 315s Selecting previously unselected package liblapack3:s390x. 315s Preparing to unpack .../06-liblapack3_3.12.1-2_s390x.deb ... 315s Unpacking liblapack3:s390x (3.12.1-2) ... 315s Selecting previously unselected package libmunge2:s390x. 315s Preparing to unpack .../07-libmunge2_0.5.16-1_s390x.deb ... 315s Unpacking libmunge2:s390x (0.5.16-1) ... 315s Selecting previously unselected package libpciaccess0:s390x. 315s Preparing to unpack .../08-libpciaccess0_0.17-3build1_s390x.deb ... 315s Unpacking libpciaccess0:s390x (0.17-3build1) ... 315s Selecting previously unselected package libxnvctrl0:s390x. 315s Preparing to unpack .../09-libxnvctrl0_510.47.03-0ubuntu4_s390x.deb ... 315s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 315s Selecting previously unselected package ocl-icd-libopencl1:s390x. 315s Preparing to unpack .../10-ocl-icd-libopencl1_2.3.2-1build1_s390x.deb ... 315s Unpacking ocl-icd-libopencl1:s390x (2.3.2-1build1) ... 315s Selecting previously unselected package libhwloc-plugins:s390x. 315s Preparing to unpack .../11-libhwloc-plugins_2.12.0-1_s390x.deb ... 315s Unpacking libhwloc-plugins:s390x (2.12.0-1) ... 315s Selecting previously unselected package libpmix2t64:s390x. 315s Preparing to unpack .../12-libpmix2t64_5.0.6-5_s390x.deb ... 315s Unpacking libpmix2t64:s390x (5.0.6-5) ... 315s Selecting previously unselected package libopenmpi40:s390x. 315s Preparing to unpack .../13-libopenmpi40_5.0.7-1_s390x.deb ... 315s Unpacking libopenmpi40:s390x (5.0.7-1) ... 315s Selecting previously unselected package openmpi-common. 315s Preparing to unpack .../14-openmpi-common_5.0.7-1_all.deb ... 315s Unpacking openmpi-common (5.0.7-1) ... 315s Selecting previously unselected package openmpi-bin. 315s Preparing to unpack .../15-openmpi-bin_5.0.7-1_s390x.deb ... 315s Unpacking openmpi-bin (5.0.7-1) ... 315s Selecting previously unselected package mpi-default-bin. 315s Preparing to unpack .../16-mpi-default-bin_1.18_s390x.deb ... 315s Unpacking mpi-default-bin (1.18) ... 315s Selecting previously unselected package libscalapack-openmpi2.2:s390x. 315s Preparing to unpack .../17-libscalapack-openmpi2.2_2.2.2-1ubuntu1_s390x.deb ... 315s Unpacking libscalapack-openmpi2.2:s390x (2.2.2-1ubuntu1) ... 315s Selecting previously unselected package nwchem-data. 315s Preparing to unpack .../18-nwchem-data_7.2.3-7build1_all.deb ... 315s Unpacking nwchem-data (7.2.3-7build1) ... 315s Selecting previously unselected package nwchem-openmpi. 315s Preparing to unpack .../19-nwchem-openmpi_7.2.3-7build1_s390x.deb ... 315s Unpacking nwchem-openmpi (7.2.3-7build1) ... 315s Selecting previously unselected package nwchem. 315s Preparing to unpack .../20-nwchem_7.2.3-7build1_all.deb ... 315s Unpacking nwchem (7.2.3-7build1) ... 316s Setting up libpciaccess0:s390x (0.17-3build1) ... 316s Setting up libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ... 316s Setting up nwchem-data (7.2.3-7build1) ... 316s Setting up libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 316s Setting up libblas3:s390x (3.12.1-2) ... 316s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 316s Setting up libmunge2:s390x (0.5.16-1) ... 316s Setting up libhwloc15:s390x (2.12.0-1) ... 316s Setting up libgfortran5:s390x (15-20250404-0ubuntu1) ... 316s Setting up ocl-icd-libopencl1:s390x (2.3.2-1build1) ... 316s Setting up openmpi-common (5.0.7-1) ... 316s Setting up librdmacm1t64:s390x (56.0-4ubuntu1) ... 316s Setting up libfabric1:s390x (1.17.0-3.1) ... 316s Setting up liblapack3:s390x (3.12.1-2) ... 316s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 316s Setting up libhwloc-plugins:s390x (2.12.0-1) ... 316s Setting up libpmix2t64:s390x (5.0.6-5) ... 316s Setting up libopenmpi40:s390x (5.0.7-1) ... 316s Setting up openmpi-bin (5.0.7-1) ... 316s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 316s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 316s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 316s Setting up mpi-default-bin (1.18) ... 316s Setting up libscalapack-openmpi2.2:s390x (2.2.2-1ubuntu1) ... 316s Setting up nwchem-openmpi (7.2.3-7build1) ... 316s Setting up nwchem (7.2.3-7build1) ... 316s Processing triggers for man-db (2.13.0-1) ... 316s Processing triggers for libc-bin (2.41-6ubuntu1) ... 317s autopkgtest [09:31:10]: test testsuite.sh: [----------------------- 317s ===== TESTING NWCHEM WITH DEFAULT MPI INSTALLATION ===== 317s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 317s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 317s skipping extra tests on s390x 317s Skipping mpich tests on s390x due to flaky mpich support 317s autopkgtest [09:31:10]: test testsuite.sh: -----------------------] 318s autopkgtest [09:31:11]: test testsuite.sh: - - - - - - - - - - results - - - - - - - - - - 318s testsuite.sh PASS 318s autopkgtest [09:31:11]: test testsuite-openmpi: preparing testbed 412s autopkgtest [09:32:45]: testbed dpkg architecture: s390x 413s autopkgtest [09:32:46]: testbed apt version: 3.0.0 413s autopkgtest [09:32:46]: @@@@@@@@@@@@@@@@@@@@ test bed setup 413s autopkgtest [09:32:46]: testbed release detected to be: questing 414s autopkgtest [09:32:47]: updating testbed package index (apt update) 414s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB] 414s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 414s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 414s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 414s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [2076 kB] 415s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [44.4 kB] 415s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [175 kB] 415s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main s390x Packages [208 kB] 415s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x Packages [1079 kB] 415s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse s390x Packages [9148 B] 415s Fetched 3701 kB in 1s (3037 kB/s) 416s Reading package lists... 416s autopkgtest [09:32:49]: upgrading testbed (apt dist-upgrade and autopurge) 417s Reading package lists... 417s Building dependency tree... 417s Reading state information... 417s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 417s Starting 2 pkgProblemResolver with broken count: 0 417s Done 417s Entering ResolveByKeep 417s 417s Calculating upgrade... 417s The following packages will be upgraded: 417s htop libpython3.13 libpython3.13-minimal libpython3.13-stdlib nano 417s python3.13 python3.13-gdbm python3.13-minimal 417s 8 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 417s Need to get 9090 kB of archives. 417s After this operation, 7168 B of additional disk space will be used. 417s Get:1 http://ftpmaster.internal/ubuntu questing-proposed/main s390x python3.13 s390x 3.13.3-2 [739 kB] 418s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libpython3.13 s390x 3.13.3-2 [2517 kB] 419s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libpython3.13-stdlib s390x 3.13.3-2 [2054 kB] 419s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main s390x python3.13-minimal s390x 3.13.3-2 [2377 kB] 420s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libpython3.13-minimal s390x 3.13.3-2 [883 kB] 420s Get:6 http://ftpmaster.internal/ubuntu questing/main s390x nano s390x 8.4-1 [299 kB] 420s Get:7 http://ftpmaster.internal/ubuntu questing/main s390x htop s390x 3.4.1-4 [189 kB] 420s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main s390x python3.13-gdbm s390x 3.13.3-2 [31.8 kB] 420s Fetched 9090 kB in 3s (3386 kB/s) 420s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81472 files and directories currently installed.) 420s Preparing to unpack .../0-python3.13_3.13.3-2_s390x.deb ... 420s Unpacking python3.13 (3.13.3-2) over (3.13.3-1) ... 420s Preparing to unpack .../1-libpython3.13_3.13.3-2_s390x.deb ... 420s Unpacking libpython3.13:s390x (3.13.3-2) over (3.13.3-1) ... 421s Preparing to unpack .../2-libpython3.13-stdlib_3.13.3-2_s390x.deb ... 421s Unpacking libpython3.13-stdlib:s390x (3.13.3-2) over (3.13.3-1) ... 421s Preparing to unpack .../3-python3.13-minimal_3.13.3-2_s390x.deb ... 421s Unpacking python3.13-minimal (3.13.3-2) over (3.13.3-1) ... 421s Preparing to unpack .../4-libpython3.13-minimal_3.13.3-2_s390x.deb ... 421s Unpacking libpython3.13-minimal:s390x (3.13.3-2) over (3.13.3-1) ... 421s Preparing to unpack .../5-nano_8.4-1_s390x.deb ... 421s Unpacking nano (8.4-1) over (8.3-1) ... 421s Preparing to unpack .../6-htop_3.4.1-4_s390x.deb ... 421s Unpacking htop (3.4.1-4) over (3.4.0-2) ... 421s Preparing to unpack .../7-python3.13-gdbm_3.13.3-2_s390x.deb ... 421s Unpacking python3.13-gdbm (3.13.3-2) over (3.13.3-1) ... 421s Setting up htop (3.4.1-4) ... 421s Setting up libpython3.13-minimal:s390x (3.13.3-2) ... 421s Setting up nano (8.4-1) ... 421s Installing new version of config file /etc/nanorc ... 421s Setting up python3.13-minimal (3.13.3-2) ... 422s Setting up libpython3.13-stdlib:s390x (3.13.3-2) ... 422s Setting up python3.13-gdbm (3.13.3-2) ... 422s Setting up libpython3.13:s390x (3.13.3-2) ... 422s Setting up python3.13 (3.13.3-2) ... 422s Processing triggers for systemd (257.4-1ubuntu3) ... 422s Processing triggers for man-db (2.13.0-1) ... 423s Processing triggers for install-info (7.1.1-1) ... 423s Processing triggers for libc-bin (2.41-6ubuntu1) ... 423s Reading package lists... 424s Building dependency tree... 424s Reading state information... 424s Starting pkgProblemResolver with broken count: 0 424s Starting 2 pkgProblemResolver with broken count: 0 424s Done 424s Solving dependencies... 424s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 427s Reading package lists... 427s Building dependency tree... 427s Reading state information... 427s Starting pkgProblemResolver with broken count: 0 427s Starting 2 pkgProblemResolver with broken count: 0 427s Done 427s The following NEW packages will be installed: 427s libblas3 libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 libhwloc-plugins 427s libhwloc15 liblapack3 libmunge2 libopenmpi40 libpciaccess0 libpmix2t64 427s librdmacm1t64 libscalapack-openmpi2.2 libxnvctrl0 mpi-default-bin 427s nwchem-data nwchem-openmpi ocl-icd-libopencl1 openmpi-bin openmpi-common 427s 0 upgraded, 20 newly installed, 0 to remove and 0 not upgraded. 427s Need to get 29.7 MB of archives. 427s After this operation, 150 MB of additional disk space will be used. 427s Get:1 http://ftpmaster.internal/ubuntu questing/main s390x libblas3 s390x 3.12.1-2 [252 kB] 428s Get:2 http://ftpmaster.internal/ubuntu questing/main s390x libevent-pthreads-2.1-7t64 s390x 2.1.12-stable-10 [7870 B] 428s Get:3 http://ftpmaster.internal/ubuntu questing/main s390x librdmacm1t64 s390x 56.0-4ubuntu1 [74.0 kB] 428s Get:4 http://ftpmaster.internal/ubuntu questing/universe s390x libfabric1 s390x 1.17.0-3.1 [558 kB] 428s Get:5 http://ftpmaster.internal/ubuntu questing/main s390x libgfortran5 s390x 15-20250404-0ubuntu1 [621 kB] 428s Get:6 http://ftpmaster.internal/ubuntu questing/universe s390x libhwloc15 s390x 2.12.0-1 [176 kB] 428s Get:7 http://ftpmaster.internal/ubuntu questing/main s390x liblapack3 s390x 3.12.1-2 [2971 kB] 428s Get:8 http://ftpmaster.internal/ubuntu questing/universe s390x libmunge2 s390x 0.5.16-1 [15.2 kB] 428s Get:9 http://ftpmaster.internal/ubuntu questing/main s390x libpciaccess0 s390x 0.17-3build1 [19.0 kB] 428s Get:10 http://ftpmaster.internal/ubuntu questing/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu4 [12.7 kB] 428s Get:11 http://ftpmaster.internal/ubuntu questing/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1build1 [41.1 kB] 428s Get:12 http://ftpmaster.internal/ubuntu questing/universe s390x libhwloc-plugins s390x 2.12.0-1 [16.1 kB] 428s Get:13 http://ftpmaster.internal/ubuntu questing/universe s390x libpmix2t64 s390x 5.0.6-5 [715 kB] 428s Get:14 http://ftpmaster.internal/ubuntu questing/universe s390x libopenmpi40 s390x 5.0.7-1 [2196 kB] 429s Get:15 http://ftpmaster.internal/ubuntu questing/universe s390x openmpi-common all 5.0.7-1 [97.9 kB] 429s Get:16 http://ftpmaster.internal/ubuntu questing/universe s390x openmpi-bin s390x 5.0.7-1 [200 kB] 429s Get:17 http://ftpmaster.internal/ubuntu questing/universe s390x mpi-default-bin s390x 1.18 [2510 B] 429s Get:18 http://ftpmaster.internal/ubuntu questing/universe s390x libscalapack-openmpi2.2 s390x 2.2.2-1ubuntu1 [1992 kB] 429s Get:19 http://ftpmaster.internal/ubuntu questing/universe s390x nwchem-data all 7.2.3-7build1 [6076 kB] 429s Get:20 http://ftpmaster.internal/ubuntu questing/universe s390x nwchem-openmpi s390x 7.2.3-7build1 [13.6 MB] 430s Fetched 29.7 MB in 3s (9625 kB/s) 430s Selecting previously unselected package libblas3:s390x. 430s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81472 files and directories currently installed.) 430s Preparing to unpack .../00-libblas3_3.12.1-2_s390x.deb ... 430s Unpacking libblas3:s390x (3.12.1-2) ... 430s Selecting previously unselected package libevent-pthreads-2.1-7t64:s390x. 430s Preparing to unpack .../01-libevent-pthreads-2.1-7t64_2.1.12-stable-10_s390x.deb ... 430s Unpacking libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ... 430s Selecting previously unselected package librdmacm1t64:s390x. 430s Preparing to unpack .../02-librdmacm1t64_56.0-4ubuntu1_s390x.deb ... 430s Unpacking librdmacm1t64:s390x (56.0-4ubuntu1) ... 430s Selecting previously unselected package libfabric1:s390x. 430s Preparing to unpack .../03-libfabric1_1.17.0-3.1_s390x.deb ... 430s Unpacking libfabric1:s390x (1.17.0-3.1) ... 430s Selecting previously unselected package libgfortran5:s390x. 430s Preparing to unpack .../04-libgfortran5_15-20250404-0ubuntu1_s390x.deb ... 430s Unpacking libgfortran5:s390x (15-20250404-0ubuntu1) ... 431s Selecting previously unselected package libhwloc15:s390x. 431s Preparing to unpack .../05-libhwloc15_2.12.0-1_s390x.deb ... 431s Unpacking libhwloc15:s390x (2.12.0-1) ... 431s Selecting previously unselected package liblapack3:s390x. 431s Preparing to unpack .../06-liblapack3_3.12.1-2_s390x.deb ... 431s Unpacking liblapack3:s390x (3.12.1-2) ... 431s Selecting previously unselected package libmunge2:s390x. 431s Preparing to unpack .../07-libmunge2_0.5.16-1_s390x.deb ... 431s Unpacking libmunge2:s390x (0.5.16-1) ... 431s Selecting previously unselected package libpciaccess0:s390x. 431s Preparing to unpack .../08-libpciaccess0_0.17-3build1_s390x.deb ... 431s Unpacking libpciaccess0:s390x (0.17-3build1) ... 431s Selecting previously unselected package libxnvctrl0:s390x. 431s Preparing to unpack .../09-libxnvctrl0_510.47.03-0ubuntu4_s390x.deb ... 431s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 431s Selecting previously unselected package ocl-icd-libopencl1:s390x. 431s Preparing to unpack .../10-ocl-icd-libopencl1_2.3.2-1build1_s390x.deb ... 431s Unpacking ocl-icd-libopencl1:s390x (2.3.2-1build1) ... 431s Selecting previously unselected package libhwloc-plugins:s390x. 431s Preparing to unpack .../11-libhwloc-plugins_2.12.0-1_s390x.deb ... 431s Unpacking libhwloc-plugins:s390x (2.12.0-1) ... 431s Selecting previously unselected package libpmix2t64:s390x. 431s Preparing to unpack .../12-libpmix2t64_5.0.6-5_s390x.deb ... 431s Unpacking libpmix2t64:s390x (5.0.6-5) ... 431s Selecting previously unselected package libopenmpi40:s390x. 431s Preparing to unpack .../13-libopenmpi40_5.0.7-1_s390x.deb ... 431s Unpacking libopenmpi40:s390x (5.0.7-1) ... 431s Selecting previously unselected package openmpi-common. 431s Preparing to unpack .../14-openmpi-common_5.0.7-1_all.deb ... 431s Unpacking openmpi-common (5.0.7-1) ... 431s Selecting previously unselected package openmpi-bin. 431s Preparing to unpack .../15-openmpi-bin_5.0.7-1_s390x.deb ... 431s Unpacking openmpi-bin (5.0.7-1) ... 431s Selecting previously unselected package mpi-default-bin. 431s Preparing to unpack .../16-mpi-default-bin_1.18_s390x.deb ... 431s Unpacking mpi-default-bin (1.18) ... 431s Selecting previously unselected package libscalapack-openmpi2.2:s390x. 431s Preparing to unpack .../17-libscalapack-openmpi2.2_2.2.2-1ubuntu1_s390x.deb ... 431s Unpacking libscalapack-openmpi2.2:s390x (2.2.2-1ubuntu1) ... 431s Selecting previously unselected package nwchem-data. 431s Preparing to unpack .../18-nwchem-data_7.2.3-7build1_all.deb ... 431s Unpacking nwchem-data (7.2.3-7build1) ... 431s Selecting previously unselected package nwchem-openmpi. 431s Preparing to unpack .../19-nwchem-openmpi_7.2.3-7build1_s390x.deb ... 431s Unpacking nwchem-openmpi (7.2.3-7build1) ... 431s Setting up libpciaccess0:s390x (0.17-3build1) ... 431s Setting up libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ... 431s Setting up nwchem-data (7.2.3-7build1) ... 431s Setting up libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 431s Setting up libblas3:s390x (3.12.1-2) ... 431s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 431s Setting up libmunge2:s390x (0.5.16-1) ... 431s Setting up libhwloc15:s390x (2.12.0-1) ... 431s Setting up libgfortran5:s390x (15-20250404-0ubuntu1) ... 431s Setting up ocl-icd-libopencl1:s390x (2.3.2-1build1) ... 431s Setting up openmpi-common (5.0.7-1) ... 431s Setting up librdmacm1t64:s390x (56.0-4ubuntu1) ... 431s Setting up libfabric1:s390x (1.17.0-3.1) ... 431s Setting up liblapack3:s390x (3.12.1-2) ... 431s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 431s Setting up libhwloc-plugins:s390x (2.12.0-1) ... 431s Setting up libpmix2t64:s390x (5.0.6-5) ... 431s Setting up libopenmpi40:s390x (5.0.7-1) ... 431s Setting up openmpi-bin (5.0.7-1) ... 431s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 431s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 431s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 431s Setting up mpi-default-bin (1.18) ... 431s Setting up libscalapack-openmpi2.2:s390x (2.2.2-1ubuntu1) ... 431s Setting up nwchem-openmpi (7.2.3-7build1) ... 431s Processing triggers for man-db (2.13.0-1) ... 432s Processing triggers for libc-bin (2.41-6ubuntu1) ... 574s autopkgtest [09:35:27]: test testsuite-openmpi: [----------------------- 575s ===== TESTING NWCHEM BUILD FOR openmpi ===== 575s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 575s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 575s skipping extra tests on s390x 575s Skipping mpich tests on s390x due to flaky mpich support 575s autopkgtest [09:35:28]: test testsuite-openmpi: -----------------------] 575s testsuite-openmpi PASS 575s autopkgtest [09:35:28]: test testsuite-openmpi: - - - - - - - - - - results - - - - - - - - - - 576s autopkgtest [09:35:29]: test testsuite-mpich: preparing testbed 673s autopkgtest [09:37:06]: testbed dpkg architecture: s390x 673s autopkgtest [09:37:06]: testbed apt version: 3.0.0 673s autopkgtest [09:37:06]: @@@@@@@@@@@@@@@@@@@@ test bed setup 673s autopkgtest [09:37:06]: testbed release detected to be: questing 674s autopkgtest [09:37:07]: updating testbed package index (apt update) 674s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB] 675s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 675s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 675s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 675s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [175 kB] 675s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [2076 kB] 675s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [44.4 kB] 675s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main s390x Packages [208 kB] 675s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe s390x Packages [1079 kB] 675s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse s390x Packages [9148 B] 675s Fetched 3701 kB in 1s (3068 kB/s) 676s Reading package lists... 677s autopkgtest [09:37:10]: upgrading testbed (apt dist-upgrade and autopurge) 677s Reading package lists... 677s Building dependency tree... 677s Reading state information... 677s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 677s Starting 2 pkgProblemResolver with broken count: 0 677s Done 677s Entering ResolveByKeep 677s 678s Calculating upgrade... 678s The following packages will be upgraded: 678s htop libpython3.13 libpython3.13-minimal libpython3.13-stdlib nano 678s python3.13 python3.13-gdbm python3.13-minimal 678s 8 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 678s Need to get 9090 kB of archives. 678s After this operation, 7168 B of additional disk space will be used. 678s Get:1 http://ftpmaster.internal/ubuntu questing-proposed/main s390x python3.13 s390x 3.13.3-2 [739 kB] 679s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libpython3.13 s390x 3.13.3-2 [2517 kB] 679s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libpython3.13-stdlib s390x 3.13.3-2 [2054 kB] 679s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main s390x python3.13-minimal s390x 3.13.3-2 [2377 kB] 679s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main s390x libpython3.13-minimal s390x 3.13.3-2 [883 kB] 679s Get:6 http://ftpmaster.internal/ubuntu questing/main s390x nano s390x 8.4-1 [299 kB] 679s Get:7 http://ftpmaster.internal/ubuntu questing/main s390x htop s390x 3.4.1-4 [189 kB] 679s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main s390x python3.13-gdbm s390x 3.13.3-2 [31.8 kB] 679s Fetched 9090 kB in 1s (9883 kB/s) 680s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81472 files and directories currently installed.) 680s Preparing to unpack .../0-python3.13_3.13.3-2_s390x.deb ... 680s Unpacking python3.13 (3.13.3-2) over (3.13.3-1) ... 680s Preparing to unpack .../1-libpython3.13_3.13.3-2_s390x.deb ... 680s Unpacking libpython3.13:s390x (3.13.3-2) over (3.13.3-1) ... 680s Preparing to unpack .../2-libpython3.13-stdlib_3.13.3-2_s390x.deb ... 680s Unpacking libpython3.13-stdlib:s390x (3.13.3-2) over (3.13.3-1) ... 680s Preparing to unpack .../3-python3.13-minimal_3.13.3-2_s390x.deb ... 680s Unpacking python3.13-minimal (3.13.3-2) over (3.13.3-1) ... 680s Preparing to unpack .../4-libpython3.13-minimal_3.13.3-2_s390x.deb ... 680s Unpacking libpython3.13-minimal:s390x (3.13.3-2) over (3.13.3-1) ... 680s Preparing to unpack .../5-nano_8.4-1_s390x.deb ... 680s Unpacking nano (8.4-1) over (8.3-1) ... 680s Preparing to unpack .../6-htop_3.4.1-4_s390x.deb ... 680s Unpacking htop (3.4.1-4) over (3.4.0-2) ... 680s Preparing to unpack .../7-python3.13-gdbm_3.13.3-2_s390x.deb ... 680s Unpacking python3.13-gdbm (3.13.3-2) over (3.13.3-1) ... 680s Setting up htop (3.4.1-4) ... 680s Setting up libpython3.13-minimal:s390x (3.13.3-2) ... 680s Setting up nano (8.4-1) ... 680s Installing new version of config file /etc/nanorc ... 680s Setting up python3.13-minimal (3.13.3-2) ... 681s Setting up libpython3.13-stdlib:s390x (3.13.3-2) ... 681s Setting up python3.13-gdbm (3.13.3-2) ... 681s Setting up libpython3.13:s390x (3.13.3-2) ... 681s Setting up python3.13 (3.13.3-2) ... 682s Processing triggers for systemd (257.4-1ubuntu3) ... 682s Processing triggers for man-db (2.13.0-1) ... 683s Processing triggers for install-info (7.1.1-1) ... 683s Processing triggers for libc-bin (2.41-6ubuntu1) ... 683s Reading package lists... 684s Building dependency tree... 684s Reading state information... 684s Starting pkgProblemResolver with broken count: 0 684s Starting 2 pkgProblemResolver with broken count: 0 684s Done 684s Solving dependencies... 684s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 687s Reading package lists... 687s Building dependency tree... 687s Reading state information... 687s Starting pkgProblemResolver with broken count: 0 687s Starting 2 pkgProblemResolver with broken count: 0 687s Done 687s The following NEW packages will be installed: 687s hwloc-nox libblas3 libevent-pthreads-2.1-7t64 libfabric1 libgfortran5 687s libhwloc-plugins libhwloc15 liblapack3 libmpich12 libmunge2 libopenmpi40 687s libpciaccess0 libpmix2t64 librdmacm1t64 libscalapack-mpich2.2 libslurm42t64 687s libxnvctrl0 mpi-default-bin mpich nwchem-data nwchem-mpich 687s ocl-icd-libopencl1 openmpi-bin openmpi-common 687s 0 upgraded, 24 newly installed, 0 to remove and 0 not upgraded. 687s Need to get 32.5 MB of archives. 687s After this operation, 159 MB of additional disk space will be used. 687s Get:1 http://ftpmaster.internal/ubuntu questing/main s390x libblas3 s390x 3.12.1-2 [252 kB] 688s Get:2 http://ftpmaster.internal/ubuntu questing/main s390x libevent-pthreads-2.1-7t64 s390x 2.1.12-stable-10 [7870 B] 688s Get:3 http://ftpmaster.internal/ubuntu questing/main s390x librdmacm1t64 s390x 56.0-4ubuntu1 [74.0 kB] 688s Get:4 http://ftpmaster.internal/ubuntu questing/universe s390x libfabric1 s390x 1.17.0-3.1 [558 kB] 688s Get:5 http://ftpmaster.internal/ubuntu questing/main s390x libgfortran5 s390x 15-20250404-0ubuntu1 [621 kB] 688s Get:6 http://ftpmaster.internal/ubuntu questing/universe s390x libhwloc15 s390x 2.12.0-1 [176 kB] 688s Get:7 http://ftpmaster.internal/ubuntu questing/main s390x liblapack3 s390x 3.12.1-2 [2971 kB] 688s Get:8 http://ftpmaster.internal/ubuntu questing/universe s390x libmunge2 s390x 0.5.16-1 [15.2 kB] 688s Get:9 http://ftpmaster.internal/ubuntu questing/main s390x libpciaccess0 s390x 0.17-3build1 [19.0 kB] 688s Get:10 http://ftpmaster.internal/ubuntu questing/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu4 [12.7 kB] 688s Get:11 http://ftpmaster.internal/ubuntu questing/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1build1 [41.1 kB] 688s Get:12 http://ftpmaster.internal/ubuntu questing/universe s390x libhwloc-plugins s390x 2.12.0-1 [16.1 kB] 688s Get:13 http://ftpmaster.internal/ubuntu questing/universe s390x libpmix2t64 s390x 5.0.6-5 [715 kB] 688s Get:14 http://ftpmaster.internal/ubuntu questing/universe s390x libopenmpi40 s390x 5.0.7-1 [2196 kB] 688s Get:15 http://ftpmaster.internal/ubuntu questing/universe s390x openmpi-common all 5.0.7-1 [97.9 kB] 688s Get:16 http://ftpmaster.internal/ubuntu questing/universe s390x openmpi-bin s390x 5.0.7-1 [200 kB] 688s Get:17 http://ftpmaster.internal/ubuntu questing/universe s390x mpi-default-bin s390x 1.18 [2510 B] 688s Get:18 http://ftpmaster.internal/ubuntu questing/universe s390x libmpich12 s390x 4.2.1-5 [1763 kB] 688s Get:19 http://ftpmaster.internal/ubuntu questing/universe s390x libscalapack-mpich2.2 s390x 2.2.2-1ubuntu1 [1985 kB] 688s Get:20 http://ftpmaster.internal/ubuntu questing/universe s390x libslurm42t64 s390x 24.11.3-2 [628 kB] 688s Get:21 http://ftpmaster.internal/ubuntu questing/universe s390x nwchem-data all 7.2.3-7build1 [6076 kB] 688s Get:22 http://ftpmaster.internal/ubuntu questing/universe s390x hwloc-nox s390x 2.12.0-1 [224 kB] 688s Get:23 http://ftpmaster.internal/ubuntu questing/universe s390x mpich s390x 4.2.1-5 [212 kB] 688s Get:24 http://ftpmaster.internal/ubuntu questing/universe s390x nwchem-mpich s390x 7.2.3-7build1 [13.6 MB] 689s Fetched 32.5 MB in 2s (17.1 MB/s) 689s Selecting previously unselected package libblas3:s390x. 689s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81472 files and directories currently installed.) 689s Preparing to unpack .../00-libblas3_3.12.1-2_s390x.deb ... 689s Unpacking libblas3:s390x (3.12.1-2) ... 689s Selecting previously unselected package libevent-pthreads-2.1-7t64:s390x. 689s Preparing to unpack .../01-libevent-pthreads-2.1-7t64_2.1.12-stable-10_s390x.deb ... 689s Unpacking libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ... 689s Selecting previously unselected package librdmacm1t64:s390x. 689s Preparing to unpack .../02-librdmacm1t64_56.0-4ubuntu1_s390x.deb ... 689s Unpacking librdmacm1t64:s390x (56.0-4ubuntu1) ... 689s Selecting previously unselected package libfabric1:s390x. 689s Preparing to unpack .../03-libfabric1_1.17.0-3.1_s390x.deb ... 689s Unpacking libfabric1:s390x (1.17.0-3.1) ... 689s Selecting previously unselected package libgfortran5:s390x. 689s Preparing to unpack .../04-libgfortran5_15-20250404-0ubuntu1_s390x.deb ... 689s Unpacking libgfortran5:s390x (15-20250404-0ubuntu1) ... 689s Selecting previously unselected package libhwloc15:s390x. 689s Preparing to unpack .../05-libhwloc15_2.12.0-1_s390x.deb ... 689s Unpacking libhwloc15:s390x (2.12.0-1) ... 689s Selecting previously unselected package liblapack3:s390x. 689s Preparing to unpack .../06-liblapack3_3.12.1-2_s390x.deb ... 689s Unpacking liblapack3:s390x (3.12.1-2) ... 689s Selecting previously unselected package libmunge2:s390x. 689s Preparing to unpack .../07-libmunge2_0.5.16-1_s390x.deb ... 689s Unpacking libmunge2:s390x (0.5.16-1) ... 690s Selecting previously unselected package libpciaccess0:s390x. 690s Preparing to unpack .../08-libpciaccess0_0.17-3build1_s390x.deb ... 690s Unpacking libpciaccess0:s390x (0.17-3build1) ... 690s Selecting previously unselected package libxnvctrl0:s390x. 690s Preparing to unpack .../09-libxnvctrl0_510.47.03-0ubuntu4_s390x.deb ... 690s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 690s Selecting previously unselected package ocl-icd-libopencl1:s390x. 690s Preparing to unpack .../10-ocl-icd-libopencl1_2.3.2-1build1_s390x.deb ... 690s Unpacking ocl-icd-libopencl1:s390x (2.3.2-1build1) ... 690s Selecting previously unselected package libhwloc-plugins:s390x. 690s Preparing to unpack .../11-libhwloc-plugins_2.12.0-1_s390x.deb ... 690s Unpacking libhwloc-plugins:s390x (2.12.0-1) ... 690s Selecting previously unselected package libpmix2t64:s390x. 690s Preparing to unpack .../12-libpmix2t64_5.0.6-5_s390x.deb ... 690s Unpacking libpmix2t64:s390x (5.0.6-5) ... 690s Selecting previously unselected package libopenmpi40:s390x. 690s Preparing to unpack .../13-libopenmpi40_5.0.7-1_s390x.deb ... 690s Unpacking libopenmpi40:s390x (5.0.7-1) ... 690s Selecting previously unselected package openmpi-common. 690s Preparing to unpack .../14-openmpi-common_5.0.7-1_all.deb ... 690s Unpacking openmpi-common (5.0.7-1) ... 690s Selecting previously unselected package openmpi-bin. 690s Preparing to unpack .../15-openmpi-bin_5.0.7-1_s390x.deb ... 690s Unpacking openmpi-bin (5.0.7-1) ... 690s Selecting previously unselected package mpi-default-bin. 690s Preparing to unpack .../16-mpi-default-bin_1.18_s390x.deb ... 690s Unpacking mpi-default-bin (1.18) ... 690s Selecting previously unselected package libmpich12:s390x. 690s Preparing to unpack .../17-libmpich12_4.2.1-5_s390x.deb ... 690s Unpacking libmpich12:s390x (4.2.1-5) ... 690s Selecting previously unselected package libscalapack-mpich2.2:s390x. 690s Preparing to unpack .../18-libscalapack-mpich2.2_2.2.2-1ubuntu1_s390x.deb ... 690s Unpacking libscalapack-mpich2.2:s390x (2.2.2-1ubuntu1) ... 690s Selecting previously unselected package libslurm42t64. 690s Preparing to unpack .../19-libslurm42t64_24.11.3-2_s390x.deb ... 690s Unpacking libslurm42t64 (24.11.3-2) ... 690s Selecting previously unselected package nwchem-data. 690s Preparing to unpack .../20-nwchem-data_7.2.3-7build1_all.deb ... 690s Unpacking nwchem-data (7.2.3-7build1) ... 690s Selecting previously unselected package hwloc-nox. 690s Preparing to unpack .../21-hwloc-nox_2.12.0-1_s390x.deb ... 690s Unpacking hwloc-nox (2.12.0-1) ... 690s Selecting previously unselected package mpich. 690s Preparing to unpack .../22-mpich_4.2.1-5_s390x.deb ... 690s Unpacking mpich (4.2.1-5) ... 690s Selecting previously unselected package nwchem-mpich. 690s Preparing to unpack .../23-nwchem-mpich_7.2.3-7build1_s390x.deb ... 690s Unpacking nwchem-mpich (7.2.3-7build1) ... 690s Setting up libpciaccess0:s390x (0.17-3build1) ... 690s Setting up libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ... 690s Setting up nwchem-data (7.2.3-7build1) ... 690s Setting up libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 690s Setting up libblas3:s390x (3.12.1-2) ... 690s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 690s Setting up libmunge2:s390x (0.5.16-1) ... 690s Setting up libslurm42t64 (24.11.3-2) ... 690s Setting up libhwloc15:s390x (2.12.0-1) ... 690s Setting up libgfortran5:s390x (15-20250404-0ubuntu1) ... 690s Setting up libmpich12:s390x (4.2.1-5) ... 690s Setting up ocl-icd-libopencl1:s390x (2.3.2-1build1) ... 690s Setting up openmpi-common (5.0.7-1) ... 690s Setting up librdmacm1t64:s390x (56.0-4ubuntu1) ... 690s Setting up libfabric1:s390x (1.17.0-3.1) ... 690s Setting up liblapack3:s390x (3.12.1-2) ... 690s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 690s Setting up hwloc-nox (2.12.0-1) ... 690s Setting up libhwloc-plugins:s390x (2.12.0-1) ... 690s Setting up libpmix2t64:s390x (5.0.6-5) ... 690s Setting up libopenmpi40:s390x (5.0.7-1) ... 690s Setting up mpich (4.2.1-5) ... 690s update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode 690s update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode 690s Setting up openmpi-bin (5.0.7-1) ... 690s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 690s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 690s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 690s Setting up mpi-default-bin (1.18) ... 690s Setting up libscalapack-mpich2.2:s390x (2.2.2-1ubuntu1) ... 690s Setting up nwchem-mpich (7.2.3-7build1) ... 690s Processing triggers for libc-bin (2.41-6ubuntu1) ... 690s Processing triggers for man-db (2.13.0-1) ... 804s autopkgtest [09:39:17]: test testsuite-mpich: [----------------------- 804s ===== TESTING NWCHEM BUILD FOR mpich ===== 804s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 804s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 804s skipping extra tests on s390x 804s Skipping mpich tests on s390x due to flaky mpich support 804s autopkgtest [09:39:17]: test testsuite-mpich: -----------------------] 805s testsuite-mpich PASS 805s autopkgtest [09:39:18]: test testsuite-mpich: - - - - - - - - - - results - - - - - - - - - - 805s autopkgtest [09:39:18]: @@@@@@@@@@@@@@@@@@@@ summary 805s testsuite.sh PASS 805s testsuite-openmpi PASS 805s testsuite-mpich PASS 823s nova [W] Using flock in prodstack6-s390x 823s Creating nova instance adt-questing-s390x-nwchem-20250502-092553-juju-7f2275-prod-proposed-migration-environment-21-23485bef-9267-45cc-84a8-8f84682f7d9e from image adt/ubuntu-questing-s390x-server-20250502.img (UUID 632ecfca-a19d-4f3a-af48-b7883fa0ccf2)... 823s nova [W] Timed out waiting for 3146a725-8513-4423-9b3a-dc5d697f22fd to get deleted. 823s nova [W] Using flock in prodstack6-s390x 823s Creating nova instance adt-questing-s390x-nwchem-20250502-092553-juju-7f2275-prod-proposed-migration-environment-21-23485bef-9267-45cc-84a8-8f84682f7d9e from image adt/ubuntu-questing-s390x-server-20250502.img (UUID 632ecfca-a19d-4f3a-af48-b7883fa0ccf2)... 823s nova [W] Timed out waiting for 04a16921-76d5-4141-b72d-d62ed8ee401e to get deleted. 823s nova [W] Using flock in prodstack6-s390x 823s Creating nova instance adt-questing-s390x-nwchem-20250502-092553-juju-7f2275-prod-proposed-migration-environment-21-23485bef-9267-45cc-84a8-8f84682f7d9e from image adt/ubuntu-questing-s390x-server-20250502.img (UUID 632ecfca-a19d-4f3a-af48-b7883fa0ccf2)... 823s nova [W] Timed out waiting for d4121f9c-2d44-4be5-9101-0c465674c8c2 to get deleted.