0s autopkgtest [08:52:06]: starting date and time: 2025-05-04 08:52:06+0000 0s autopkgtest [08:52:06]: git checkout: 9986aa8c Merge branch 'skia/fix_network_interface' into 'ubuntu/production' 0s autopkgtest [08:52:06]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.8qa4a_1s/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:mpich,src:python3.13 --apt-upgrade lammps --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=mpich/4.3.0-5 python3.13/3.13.3-2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-ppc64el --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-ppc64el-20.secgroup --name adt-questing-ppc64el-lammps-20250504-085206-juju-7f2275-prod-proposed-migration-environment-2-7ca75e9f-3e7a-4e03-a430-f89538fb08ed --image adt/ubuntu-questing-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-ppc64el -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 73s autopkgtest [08:53:19]: testbed dpkg architecture: ppc64el 73s autopkgtest [08:53:19]: testbed apt version: 3.0.0 74s autopkgtest [08:53:20]: @@@@@@@@@@@@@@@@@@@@ test bed setup 74s autopkgtest [08:53:20]: testbed release detected to be: None 75s autopkgtest [08:53:21]: updating testbed package index (apt update) 75s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB] 75s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 75s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 75s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 76s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [1284 kB] 76s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [32.6 kB] 76s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [133 kB] 76s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main ppc64el Packages [176 kB] 76s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe ppc64el Packages [1245 kB] 76s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse ppc64el Packages [31.7 kB] 76s Fetched 3012 kB in 1s (2525 kB/s) 77s Reading package lists... 78s autopkgtest [08:53:24]: upgrading testbed (apt dist-upgrade and autopurge) 78s Reading package lists... 78s Building dependency tree... 78s Reading state information... 78s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 78s Starting 2 pkgProblemResolver with broken count: 0 78s Done 79s Entering ResolveByKeep 79s 79s Calculating upgrade... 79s The following packages will be upgraded: 79s libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libpython3.13 79s libpython3.13-minimal libpython3.13-stdlib python3.13 python3.13-gdbm 79s python3.13-minimal 79s 9 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 79s Need to get 14.3 MB of archives. 79s After this operation, 227 kB disk space will be freed. 79s Get:1 http://ftpmaster.internal/ubuntu questing-proposed/main ppc64el python3.13 ppc64el 3.13.3-2 [739 kB] 80s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main ppc64el libpython3.13 ppc64el 3.13.3-2 [2544 kB] 80s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main ppc64el libpython3.13-stdlib ppc64el 3.13.3-2 [2110 kB] 80s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main ppc64el python3.13-minimal ppc64el 3.13.3-2 [2502 kB] 80s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main ppc64el libpython3.13-minimal ppc64el 3.13.3-2 [886 kB] 80s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/universe ppc64el libpython3.12t64 ppc64el 3.12.10-1 [2558 kB] 81s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/universe ppc64el libpython3.12-stdlib ppc64el 3.12.10-1 [2105 kB] 81s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/universe ppc64el libpython3.12-minimal ppc64el 3.12.10-1 [841 kB] 81s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/main ppc64el python3.13-gdbm ppc64el 3.13.3-2 [32.3 kB] 81s Fetched 14.3 MB in 1s (9560 kB/s) 81s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 107204 files and directories currently installed.) 81s Preparing to unpack .../0-python3.13_3.13.3-2_ppc64el.deb ... 81s Unpacking python3.13 (3.13.3-2) over (3.13.3-1) ... 81s Preparing to unpack .../1-libpython3.13_3.13.3-2_ppc64el.deb ... 81s Unpacking libpython3.13:ppc64el (3.13.3-2) over (3.13.3-1) ... 81s Preparing to unpack .../2-libpython3.13-stdlib_3.13.3-2_ppc64el.deb ... 81s Unpacking libpython3.13-stdlib:ppc64el (3.13.3-2) over (3.13.3-1) ... 82s Preparing to unpack .../3-python3.13-minimal_3.13.3-2_ppc64el.deb ... 82s Unpacking python3.13-minimal (3.13.3-2) over (3.13.3-1) ... 82s Preparing to unpack .../4-libpython3.13-minimal_3.13.3-2_ppc64el.deb ... 82s Unpacking libpython3.13-minimal:ppc64el (3.13.3-2) over (3.13.3-1) ... 82s Preparing to unpack .../5-libpython3.12t64_3.12.10-1_ppc64el.deb ... 82s Unpacking libpython3.12t64:ppc64el (3.12.10-1) over (3.12.8-3) ... 82s Preparing to unpack .../6-libpython3.12-stdlib_3.12.10-1_ppc64el.deb ... 82s Unpacking libpython3.12-stdlib:ppc64el (3.12.10-1) over (3.12.8-3) ... 82s Preparing to unpack .../7-libpython3.12-minimal_3.12.10-1_ppc64el.deb ... 82s Unpacking libpython3.12-minimal:ppc64el (3.12.10-1) over (3.12.8-3) ... 82s Preparing to unpack .../8-python3.13-gdbm_3.13.3-2_ppc64el.deb ... 82s Unpacking python3.13-gdbm (3.13.3-2) over (3.13.3-1) ... 82s Setting up libpython3.12-minimal:ppc64el (3.12.10-1) ... 82s Setting up libpython3.13-minimal:ppc64el (3.13.3-2) ... 82s Setting up python3.13-minimal (3.13.3-2) ... 83s Setting up libpython3.13-stdlib:ppc64el (3.13.3-2) ... 83s Setting up python3.13-gdbm (3.13.3-2) ... 83s Setting up libpython3.13:ppc64el (3.13.3-2) ... 83s Setting up libpython3.12-stdlib:ppc64el (3.12.10-1) ... 83s Setting up python3.13 (3.13.3-2) ... 84s Setting up libpython3.12t64:ppc64el (3.12.10-1) ... 84s Processing triggers for systemd (257.4-1ubuntu3) ... 84s Processing triggers for man-db (2.13.0-1) ... 85s Processing triggers for libc-bin (2.41-6ubuntu1) ... 85s Reading package lists... 85s Building dependency tree... 85s Reading state information... 86s Starting pkgProblemResolver with broken count: 0 86s Starting 2 pkgProblemResolver with broken count: 0 86s Done 86s Solving dependencies... 86s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 89s autopkgtest [08:53:35]: testbed running kernel: Linux 6.14.0-15-generic #15-Ubuntu SMP Sun Apr 6 14:52:42 UTC 2025 89s autopkgtest [08:53:35]: @@@@@@@@@@@@@@@@@@@@ apt-source lammps 103s Get:1 http://ftpmaster.internal/ubuntu questing/universe lammps 20240207+dfsg-3build3 (dsc) [3182 B] 103s Get:2 http://ftpmaster.internal/ubuntu questing/universe lammps 20240207+dfsg-3build3 (tar) [153 MB] 103s Get:3 http://ftpmaster.internal/ubuntu questing/universe lammps 20240207+dfsg-3build3 (diff) [17.4 kB] 103s gpgv: Signature made Tue Feb 25 20:55:58 2025 UTC 103s gpgv: using RSA key B8340990283D8D9BC1949AC74799A35146D12B35 103s gpgv: Can't check signature: No public key 103s dpkg-source: warning: cannot verify inline signature for ./lammps_20240207+dfsg-3build3.dsc: no acceptable signature found 111s autopkgtest [08:53:57]: testing package lammps version 20240207+dfsg-3build3 112s autopkgtest [08:53:58]: build not needed 131s autopkgtest [08:54:17]: test crack: preparing testbed 131s Reading package lists... 131s Building dependency tree... 131s Reading state information... 132s Starting pkgProblemResolver with broken count: 0 132s Starting 2 pkgProblemResolver with broken count: 0 132s Done 132s The following NEW packages will be installed: 132s fontconfig-config fonts-dejavu-core fonts-dejavu-mono lammps lammps-data 132s libaec0 libamd-comgr2 libamdhip64-5 libblas3 libcairo2 libdeflate0 132s libdouble-conversion3 libevent-pthreads-2.1-7t64 libfabric1 libfftw3-double3 132s libfontconfig1 libgbm1 libgfortran5 libgl1 libgl1-mesa-dri libgl2ps1.4 132s libglew2.2 libglvnd0 libglx-mesa0 libglx0 libgomp1 libhdf5-310 132s libhdf5-hl-310 libhsa-runtime64-1 libhsakmt1 libhwloc-plugins libhwloc15 132s libibmad5 libibumad3 libjbig0 libjpeg-turbo8 libjpeg8 libjsoncpp26 132s libkim-api2 liblammps0t64 liblapack3 liblerc4 libllvm17t64 libmunge2 132s libnetcdf22 libogg0 libopengl0 libopenmpi40 libpciaccess0 libpixman-1-0 132s libpmix2t64 libpnetcdf6 libproj25 librdmacm1t64 libsharpyuv0 libsz2 libtbb12 132s libtbbbind-2-5 libtbbmalloc2 libtcl8.6 libtheoradec1 libtheoraenc1 libtiff6 132s libtk8.6 libucx0 libvoro++1 libvtk9.3 libvulkan1 libwayland-server0 libwebp7 132s libx11-xcb1 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 132s libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxft2 libxnvctrl0 132s libxrender1 libxshmfence1 libxss1 libxxf86vm1 mesa-libgallium 132s mpi-default-bin ocl-icd-libopencl1 openmpi-bin openmpi-common proj-data 132s x11-common 132s 0 upgraded, 92 newly installed, 0 to remove and 0 not upgraded. 132s Need to get 139 MB of archives. 132s After this operation, 660 MB of additional disk space will be used. 132s Get:1 http://ftpmaster.internal/ubuntu questing/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB] 133s Get:2 http://ftpmaster.internal/ubuntu questing/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB] 133s Get:3 http://ftpmaster.internal/ubuntu questing/main ppc64el fontconfig-config ppc64el 2.15.0-2.2ubuntu1 [37.9 kB] 133s Get:4 http://ftpmaster.internal/ubuntu questing/universe ppc64el lammps-data all 20240207+dfsg-3build3 [9732 kB] 133s Get:5 http://ftpmaster.internal/ubuntu questing/universe ppc64el libaec0 ppc64el 1.1.3-1 [30.1 kB] 133s Get:6 http://ftpmaster.internal/ubuntu questing/universe ppc64el libllvm17t64 ppc64el 1:17.0.6-21 [27.0 MB] 134s Get:7 http://ftpmaster.internal/ubuntu questing/universe ppc64el libamd-comgr2 ppc64el 6.0+git20231212.4510c28+dfsg-3build2 [15.3 MB] 135s Get:8 http://ftpmaster.internal/ubuntu questing/universe ppc64el libhsakmt1 ppc64el 5.7.0-1build1 [76.4 kB] 135s Get:9 http://ftpmaster.internal/ubuntu questing/universe ppc64el libhsa-runtime64-1 ppc64el 5.7.1-2build1 [330 kB] 135s Get:10 http://ftpmaster.internal/ubuntu questing/universe ppc64el libamdhip64-5 ppc64el 5.7.1-5.1 [9349 kB] 135s Get:11 http://ftpmaster.internal/ubuntu questing/main ppc64el libblas3 ppc64el 3.12.1-2 [239 kB] 135s Get:12 http://ftpmaster.internal/ubuntu questing/main ppc64el libfontconfig1 ppc64el 2.15.0-2.2ubuntu1 [187 kB] 135s Get:13 http://ftpmaster.internal/ubuntu questing/main ppc64el libpixman-1-0 ppc64el 0.44.0-3 [334 kB] 135s Get:14 http://ftpmaster.internal/ubuntu questing/main ppc64el libxcb-render0 ppc64el 1.17.0-2 [17.2 kB] 135s Get:15 http://ftpmaster.internal/ubuntu questing/main ppc64el libxcb-shm0 ppc64el 1.17.0-2 [5980 B] 135s Get:16 http://ftpmaster.internal/ubuntu questing/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1build1 [23.1 kB] 135s Get:17 http://ftpmaster.internal/ubuntu questing/main ppc64el libcairo2 ppc64el 1.18.4-1 [746 kB] 135s Get:18 http://ftpmaster.internal/ubuntu questing/main ppc64el libdeflate0 ppc64el 1.23-2 [63.3 kB] 135s Get:19 http://ftpmaster.internal/ubuntu questing/universe ppc64el libdouble-conversion3 ppc64el 3.3.1-1 [46.3 kB] 135s Get:20 http://ftpmaster.internal/ubuntu questing/main ppc64el libevent-pthreads-2.1-7t64 ppc64el 2.1.12-stable-10 [8026 B] 135s Get:21 http://ftpmaster.internal/ubuntu questing/main ppc64el librdmacm1t64 ppc64el 56.0-4ubuntu1 [80.2 kB] 135s Get:22 http://ftpmaster.internal/ubuntu questing/universe ppc64el libfabric1 ppc64el 1.17.0-3.1 [693 kB] 135s Get:23 http://ftpmaster.internal/ubuntu questing/main ppc64el libgomp1 ppc64el 15-20250404-0ubuntu1 [168 kB] 135s Get:24 http://ftpmaster.internal/ubuntu questing/main ppc64el libfftw3-double3 ppc64el 3.3.10-2fakesync1build1 [443 kB] 135s Get:25 http://ftpmaster.internal/ubuntu questing/main ppc64el libwayland-server0 ppc64el 1.23.1-3 [42.4 kB] 135s Get:26 http://ftpmaster.internal/ubuntu questing/main ppc64el libx11-xcb1 ppc64el 2:1.8.10-2 [8008 B] 135s Get:27 http://ftpmaster.internal/ubuntu questing/main ppc64el libxcb-dri3-0 ppc64el 1.17.0-2 [7842 B] 135s Get:28 http://ftpmaster.internal/ubuntu questing/main ppc64el libxcb-present0 ppc64el 1.17.0-2 [6276 B] 135s Get:29 http://ftpmaster.internal/ubuntu questing/main ppc64el libxcb-randr0 ppc64el 1.17.0-2 [19.1 kB] 135s Get:30 http://ftpmaster.internal/ubuntu questing/main ppc64el libxcb-sync1 ppc64el 1.17.0-2 [9804 B] 135s Get:31 http://ftpmaster.internal/ubuntu questing/main ppc64el libxcb-xfixes0 ppc64el 1.17.0-2 [10.7 kB] 135s Get:32 http://ftpmaster.internal/ubuntu questing/main ppc64el libxshmfence1 ppc64el 1.3.3-1 [5364 B] 135s Get:33 http://ftpmaster.internal/ubuntu questing/main ppc64el mesa-libgallium ppc64el 25.0.3-1ubuntu2 [9535 kB] 135s Get:34 http://ftpmaster.internal/ubuntu questing/main ppc64el libgbm1 ppc64el 25.0.3-1ubuntu2 [39.1 kB] 135s Get:35 http://ftpmaster.internal/ubuntu questing/main ppc64el libgfortran5 ppc64el 15-20250404-0ubuntu1 [615 kB] 135s Get:36 http://ftpmaster.internal/ubuntu questing/main ppc64el libvulkan1 ppc64el 1.4.309.0-1 [162 kB] 135s Get:37 http://ftpmaster.internal/ubuntu questing/main ppc64el libgl1-mesa-dri ppc64el 25.0.3-1ubuntu2 [35.1 kB] 135s Get:38 http://ftpmaster.internal/ubuntu questing/main ppc64el libglvnd0 ppc64el 1.7.0-1build1 [72.4 kB] 135s Get:39 http://ftpmaster.internal/ubuntu questing/main ppc64el libxcb-glx0 ppc64el 1.17.0-2 [26.3 kB] 135s Get:40 http://ftpmaster.internal/ubuntu questing/main ppc64el libxxf86vm1 ppc64el 1:1.1.4-1build4 [11.1 kB] 135s Get:41 http://ftpmaster.internal/ubuntu questing/main ppc64el libglx-mesa0 ppc64el 25.0.3-1ubuntu2 [175 kB] 135s Get:42 http://ftpmaster.internal/ubuntu questing/main ppc64el libglx0 ppc64el 1.7.0-1build1 [42.7 kB] 135s Get:43 http://ftpmaster.internal/ubuntu questing/main ppc64el libgl1 ppc64el 1.7.0-1build1 [107 kB] 135s Get:44 http://ftpmaster.internal/ubuntu questing/universe ppc64el libgl2ps1.4 ppc64el 1.4.2+dfsg1-2build1 [52.6 kB] 135s Get:45 http://ftpmaster.internal/ubuntu questing/universe ppc64el libglew2.2 ppc64el 2.2.0-4build1 [186 kB] 135s Get:46 http://ftpmaster.internal/ubuntu questing/universe ppc64el libsz2 ppc64el 1.1.3-1 [5566 B] 135s Get:47 http://ftpmaster.internal/ubuntu questing/universe ppc64el libhdf5-310 ppc64el 1.14.5+repack-3 [1523 kB] 135s Get:48 http://ftpmaster.internal/ubuntu questing/universe ppc64el libhdf5-hl-310 ppc64el 1.14.5+repack-3 [74.9 kB] 135s Get:49 http://ftpmaster.internal/ubuntu questing/universe ppc64el libhwloc15 ppc64el 2.12.0-1 [221 kB] 135s Get:50 http://ftpmaster.internal/ubuntu questing/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-3ubuntu2 [215 kB] 135s Get:51 http://ftpmaster.internal/ubuntu questing/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 135s Get:52 http://ftpmaster.internal/ubuntu questing/main ppc64el libjsoncpp26 ppc64el 1.9.6-3 [91.3 kB] 136s Get:53 http://ftpmaster.internal/ubuntu questing/universe ppc64el libkim-api2 ppc64el 2.3.0-1ubuntu1 [605 kB] 136s Get:54 http://ftpmaster.internal/ubuntu questing/main ppc64el liblapack3 ppc64el 3.12.1-2 [2813 kB] 136s Get:55 http://ftpmaster.internal/ubuntu questing/universe ppc64el libnetcdf22 ppc64el 1:4.9.3-1 [639 kB] 136s Get:56 http://ftpmaster.internal/ubuntu questing/universe ppc64el libmunge2 ppc64el 0.5.16-1 [17.3 kB] 136s Get:57 http://ftpmaster.internal/ubuntu questing/main ppc64el libpciaccess0 ppc64el 0.17-3build1 [21.4 kB] 136s Get:58 http://ftpmaster.internal/ubuntu questing/main ppc64el libxnvctrl0 ppc64el 510.47.03-0ubuntu4 [12.6 kB] 136s Get:59 http://ftpmaster.internal/ubuntu questing/universe ppc64el ocl-icd-libopencl1 ppc64el 2.3.2-1build1 [42.9 kB] 136s Get:60 http://ftpmaster.internal/ubuntu questing/universe ppc64el libhwloc-plugins ppc64el 2.12.0-1 [17.5 kB] 136s Get:61 http://ftpmaster.internal/ubuntu questing/universe ppc64el libpmix2t64 ppc64el 5.0.6-5 [759 kB] 136s Get:62 http://ftpmaster.internal/ubuntu questing/main ppc64el libibumad3 ppc64el 56.0-4ubuntu1 [33.7 kB] 136s Get:63 http://ftpmaster.internal/ubuntu questing/main ppc64el libibmad5 ppc64el 56.0-4ubuntu1 [47.0 kB] 136s Get:64 http://ftpmaster.internal/ubuntu questing/universe ppc64el libucx0 ppc64el 1.18.1+ds-2 [1294 kB] 136s Get:65 http://ftpmaster.internal/ubuntu questing/universe ppc64el libopenmpi40 ppc64el 5.0.7-1 [2617 kB] 136s Get:66 http://ftpmaster.internal/ubuntu questing/universe ppc64el libpnetcdf6 ppc64el 1.14.0-2 [1651 kB] 136s Get:67 http://ftpmaster.internal/ubuntu questing/universe ppc64el libvoro++1 ppc64el 0.5+revert-to-0.4.6+dfsg1-1 [117 kB] 136s Get:68 http://ftpmaster.internal/ubuntu questing/main ppc64el libogg0 ppc64el 1.3.5-3build1 [27.6 kB] 136s Get:69 http://ftpmaster.internal/ubuntu questing/main ppc64el libopengl0 ppc64el 1.7.0-1build1 [35.5 kB] 136s Get:70 http://ftpmaster.internal/ubuntu questing/universe ppc64el proj-data all 9.5.1-1 [7924 kB] 136s Get:71 http://ftpmaster.internal/ubuntu questing/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu2 [35.9 kB] 136s Get:72 http://ftpmaster.internal/ubuntu questing/main ppc64el liblerc4 ppc64el 4.0.0+ds-5ubuntu1 [298 kB] 136s Get:73 http://ftpmaster.internal/ubuntu questing/main ppc64el libsharpyuv0 ppc64el 1.5.0-0.1 [22.3 kB] 136s Get:74 http://ftpmaster.internal/ubuntu questing/main ppc64el libwebp7 ppc64el 1.5.0-0.1 [315 kB] 136s Get:75 http://ftpmaster.internal/ubuntu questing/main ppc64el libtiff6 ppc64el 4.7.0-3ubuntu1 [283 kB] 136s Get:76 http://ftpmaster.internal/ubuntu questing/universe ppc64el libproj25 ppc64el 9.5.1-1 [1517 kB] 136s Get:77 http://ftpmaster.internal/ubuntu questing/universe ppc64el libtbbbind-2-5 ppc64el 2022.0.0-2 [15.8 kB] 136s Get:78 http://ftpmaster.internal/ubuntu questing/universe ppc64el libtbbmalloc2 ppc64el 2022.0.0-2 [62.0 kB] 136s Get:79 http://ftpmaster.internal/ubuntu questing/universe ppc64el libtbb12 ppc64el 2022.0.0-2 [105 kB] 136s Get:80 http://ftpmaster.internal/ubuntu questing/main ppc64el libtcl8.6 ppc64el 8.6.16+dfsg-1 [1201 kB] 136s Get:81 http://ftpmaster.internal/ubuntu questing/main ppc64el libtheoradec1 ppc64el 1.2.0~alpha1+dfsg-6 [89.5 kB] 136s Get:82 http://ftpmaster.internal/ubuntu questing/main ppc64el libtheoraenc1 ppc64el 1.2.0~alpha1+dfsg-6 [155 kB] 136s Get:83 http://ftpmaster.internal/ubuntu questing/main ppc64el libxft2 ppc64el 2.3.6-1build1 [61.5 kB] 136s Get:84 http://ftpmaster.internal/ubuntu questing/main ppc64el x11-common all 1:7.7+23ubuntu4 [21.8 kB] 136s Get:85 http://ftpmaster.internal/ubuntu questing/main ppc64el libxss1 ppc64el 1:1.2.3-1build3 [7980 B] 136s Get:86 http://ftpmaster.internal/ubuntu questing/main ppc64el libtk8.6 ppc64el 8.6.16-1 [946 kB] 136s Get:87 http://ftpmaster.internal/ubuntu questing/universe ppc64el libvtk9.3 ppc64el 9.3.0+dfsg1-4ubuntu1 [26.7 MB] 137s Get:88 http://ftpmaster.internal/ubuntu questing/universe ppc64el liblammps0t64 ppc64el 20240207+dfsg-3build3 [8640 kB] 138s Get:89 http://ftpmaster.internal/ubuntu questing/universe ppc64el openmpi-common all 5.0.7-1 [97.9 kB] 138s Get:90 http://ftpmaster.internal/ubuntu questing/universe ppc64el openmpi-bin ppc64el 5.0.7-1 [214 kB] 138s Get:91 http://ftpmaster.internal/ubuntu questing/universe ppc64el mpi-default-bin ppc64el 1.18 [2510 B] 138s Get:92 http://ftpmaster.internal/ubuntu questing/universe ppc64el lammps ppc64el 20240207+dfsg-3build3 [15.1 kB] 138s Fetched 139 MB in 6s (24.2 MB/s) 138s Selecting previously unselected package fonts-dejavu-mono. 138s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 107204 files and directories currently installed.) 138s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ... 138s Unpacking fonts-dejavu-mono (2.37-8) ... 138s Selecting previously unselected package fonts-dejavu-core. 138s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ... 138s Unpacking fonts-dejavu-core (2.37-8) ... 138s Selecting previously unselected package fontconfig-config. 138s Preparing to unpack .../02-fontconfig-config_2.15.0-2.2ubuntu1_ppc64el.deb ... 139s Unpacking fontconfig-config (2.15.0-2.2ubuntu1) ... 139s Selecting previously unselected package lammps-data. 139s Preparing to unpack .../03-lammps-data_20240207+dfsg-3build3_all.deb ... 139s Unpacking lammps-data (20240207+dfsg-3build3) ... 139s Selecting previously unselected package libaec0:ppc64el. 139s Preparing to unpack .../04-libaec0_1.1.3-1_ppc64el.deb ... 139s Unpacking libaec0:ppc64el (1.1.3-1) ... 139s Selecting previously unselected package libllvm17t64:ppc64el. 139s Preparing to unpack .../05-libllvm17t64_1%3a17.0.6-21_ppc64el.deb ... 139s Unpacking libllvm17t64:ppc64el (1:17.0.6-21) ... 139s Selecting previously unselected package libamd-comgr2:ppc64el. 139s Preparing to unpack .../06-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3build2_ppc64el.deb ... 139s Unpacking libamd-comgr2:ppc64el (6.0+git20231212.4510c28+dfsg-3build2) ... 140s Selecting previously unselected package libhsakmt1:ppc64el. 140s Preparing to unpack .../07-libhsakmt1_5.7.0-1build1_ppc64el.deb ... 140s Unpacking libhsakmt1:ppc64el (5.7.0-1build1) ... 140s Selecting previously unselected package libhsa-runtime64-1. 140s Preparing to unpack .../08-libhsa-runtime64-1_5.7.1-2build1_ppc64el.deb ... 140s Unpacking libhsa-runtime64-1 (5.7.1-2build1) ... 140s Selecting previously unselected package libamdhip64-5. 140s Preparing to unpack .../09-libamdhip64-5_5.7.1-5.1_ppc64el.deb ... 140s Unpacking libamdhip64-5 (5.7.1-5.1) ... 140s Selecting previously unselected package libblas3:ppc64el. 140s Preparing to unpack .../10-libblas3_3.12.1-2_ppc64el.deb ... 140s Unpacking libblas3:ppc64el (3.12.1-2) ... 140s Selecting previously unselected package libfontconfig1:ppc64el. 140s Preparing to unpack .../11-libfontconfig1_2.15.0-2.2ubuntu1_ppc64el.deb ... 140s Unpacking libfontconfig1:ppc64el (2.15.0-2.2ubuntu1) ... 140s Selecting previously unselected package libpixman-1-0:ppc64el. 140s Preparing to unpack .../12-libpixman-1-0_0.44.0-3_ppc64el.deb ... 140s Unpacking libpixman-1-0:ppc64el (0.44.0-3) ... 140s Selecting previously unselected package libxcb-render0:ppc64el. 140s Preparing to unpack .../13-libxcb-render0_1.17.0-2_ppc64el.deb ... 140s Unpacking libxcb-render0:ppc64el (1.17.0-2) ... 140s Selecting previously unselected package libxcb-shm0:ppc64el. 140s Preparing to unpack .../14-libxcb-shm0_1.17.0-2_ppc64el.deb ... 140s Unpacking libxcb-shm0:ppc64el (1.17.0-2) ... 140s Selecting previously unselected package libxrender1:ppc64el. 140s Preparing to unpack .../15-libxrender1_1%3a0.9.10-1.1build1_ppc64el.deb ... 140s Unpacking libxrender1:ppc64el (1:0.9.10-1.1build1) ... 140s Selecting previously unselected package libcairo2:ppc64el. 140s Preparing to unpack .../16-libcairo2_1.18.4-1_ppc64el.deb ... 140s Unpacking libcairo2:ppc64el (1.18.4-1) ... 140s Selecting previously unselected package libdeflate0:ppc64el. 140s Preparing to unpack .../17-libdeflate0_1.23-2_ppc64el.deb ... 140s Unpacking libdeflate0:ppc64el (1.23-2) ... 140s Selecting previously unselected package libdouble-conversion3:ppc64el. 140s Preparing to unpack .../18-libdouble-conversion3_3.3.1-1_ppc64el.deb ... 140s Unpacking libdouble-conversion3:ppc64el (3.3.1-1) ... 140s Selecting previously unselected package libevent-pthreads-2.1-7t64:ppc64el. 140s Preparing to unpack .../19-libevent-pthreads-2.1-7t64_2.1.12-stable-10_ppc64el.deb ... 140s Unpacking libevent-pthreads-2.1-7t64:ppc64el (2.1.12-stable-10) ... 140s Selecting previously unselected package librdmacm1t64:ppc64el. 140s Preparing to unpack .../20-librdmacm1t64_56.0-4ubuntu1_ppc64el.deb ... 140s Unpacking librdmacm1t64:ppc64el (56.0-4ubuntu1) ... 140s Selecting previously unselected package libfabric1:ppc64el. 140s Preparing to unpack .../21-libfabric1_1.17.0-3.1_ppc64el.deb ... 140s Unpacking libfabric1:ppc64el (1.17.0-3.1) ... 140s Selecting previously unselected package libgomp1:ppc64el. 140s Preparing to unpack .../22-libgomp1_15-20250404-0ubuntu1_ppc64el.deb ... 140s Unpacking libgomp1:ppc64el (15-20250404-0ubuntu1) ... 140s Selecting previously unselected package libfftw3-double3:ppc64el. 140s Preparing to unpack .../23-libfftw3-double3_3.3.10-2fakesync1build1_ppc64el.deb ... 140s Unpacking libfftw3-double3:ppc64el (3.3.10-2fakesync1build1) ... 140s Selecting previously unselected package libwayland-server0:ppc64el. 140s Preparing to unpack .../24-libwayland-server0_1.23.1-3_ppc64el.deb ... 140s Unpacking libwayland-server0:ppc64el (1.23.1-3) ... 140s Selecting previously unselected package libx11-xcb1:ppc64el. 140s Preparing to unpack .../25-libx11-xcb1_2%3a1.8.10-2_ppc64el.deb ... 140s Unpacking libx11-xcb1:ppc64el (2:1.8.10-2) ... 140s Selecting previously unselected package libxcb-dri3-0:ppc64el. 140s Preparing to unpack .../26-libxcb-dri3-0_1.17.0-2_ppc64el.deb ... 140s Unpacking libxcb-dri3-0:ppc64el (1.17.0-2) ... 140s Selecting previously unselected package libxcb-present0:ppc64el. 140s Preparing to unpack .../27-libxcb-present0_1.17.0-2_ppc64el.deb ... 140s Unpacking libxcb-present0:ppc64el (1.17.0-2) ... 140s Selecting previously unselected package libxcb-randr0:ppc64el. 140s Preparing to unpack .../28-libxcb-randr0_1.17.0-2_ppc64el.deb ... 140s Unpacking libxcb-randr0:ppc64el (1.17.0-2) ... 140s Selecting previously unselected package libxcb-sync1:ppc64el. 140s Preparing to unpack .../29-libxcb-sync1_1.17.0-2_ppc64el.deb ... 140s Unpacking libxcb-sync1:ppc64el (1.17.0-2) ... 140s Selecting previously unselected package libxcb-xfixes0:ppc64el. 140s Preparing to unpack .../30-libxcb-xfixes0_1.17.0-2_ppc64el.deb ... 140s Unpacking libxcb-xfixes0:ppc64el (1.17.0-2) ... 140s Selecting previously unselected package libxshmfence1:ppc64el. 140s Preparing to unpack .../31-libxshmfence1_1.3.3-1_ppc64el.deb ... 140s Unpacking libxshmfence1:ppc64el (1.3.3-1) ... 140s Selecting previously unselected package mesa-libgallium:ppc64el. 140s Preparing to unpack .../32-mesa-libgallium_25.0.3-1ubuntu2_ppc64el.deb ... 140s Unpacking mesa-libgallium:ppc64el (25.0.3-1ubuntu2) ... 141s Selecting previously unselected package libgbm1:ppc64el. 141s Preparing to unpack .../33-libgbm1_25.0.3-1ubuntu2_ppc64el.deb ... 141s Unpacking libgbm1:ppc64el (25.0.3-1ubuntu2) ... 141s Selecting previously unselected package libgfortran5:ppc64el. 141s Preparing to unpack .../34-libgfortran5_15-20250404-0ubuntu1_ppc64el.deb ... 141s Unpacking libgfortran5:ppc64el (15-20250404-0ubuntu1) ... 141s Selecting previously unselected package libvulkan1:ppc64el. 141s Preparing to unpack .../35-libvulkan1_1.4.309.0-1_ppc64el.deb ... 141s Unpacking libvulkan1:ppc64el (1.4.309.0-1) ... 141s Selecting previously unselected package libgl1-mesa-dri:ppc64el. 141s Preparing to unpack .../36-libgl1-mesa-dri_25.0.3-1ubuntu2_ppc64el.deb ... 141s Unpacking libgl1-mesa-dri:ppc64el (25.0.3-1ubuntu2) ... 141s Selecting previously unselected package libglvnd0:ppc64el. 141s Preparing to unpack .../37-libglvnd0_1.7.0-1build1_ppc64el.deb ... 141s Unpacking libglvnd0:ppc64el (1.7.0-1build1) ... 141s Selecting previously unselected package libxcb-glx0:ppc64el. 141s Preparing to unpack .../38-libxcb-glx0_1.17.0-2_ppc64el.deb ... 141s Unpacking libxcb-glx0:ppc64el (1.17.0-2) ... 141s Selecting previously unselected package libxxf86vm1:ppc64el. 141s Preparing to unpack .../39-libxxf86vm1_1%3a1.1.4-1build4_ppc64el.deb ... 141s Unpacking libxxf86vm1:ppc64el (1:1.1.4-1build4) ... 141s Selecting previously unselected package libglx-mesa0:ppc64el. 141s Preparing to unpack .../40-libglx-mesa0_25.0.3-1ubuntu2_ppc64el.deb ... 141s Unpacking libglx-mesa0:ppc64el (25.0.3-1ubuntu2) ... 141s Selecting previously unselected package libglx0:ppc64el. 141s Preparing to unpack .../41-libglx0_1.7.0-1build1_ppc64el.deb ... 141s Unpacking libglx0:ppc64el (1.7.0-1build1) ... 141s Selecting previously unselected package libgl1:ppc64el. 141s Preparing to unpack .../42-libgl1_1.7.0-1build1_ppc64el.deb ... 141s Unpacking libgl1:ppc64el (1.7.0-1build1) ... 141s Selecting previously unselected package libgl2ps1.4. 141s Preparing to unpack .../43-libgl2ps1.4_1.4.2+dfsg1-2build1_ppc64el.deb ... 141s Unpacking libgl2ps1.4 (1.4.2+dfsg1-2build1) ... 141s Selecting previously unselected package libglew2.2:ppc64el. 141s Preparing to unpack .../44-libglew2.2_2.2.0-4build1_ppc64el.deb ... 141s Unpacking libglew2.2:ppc64el (2.2.0-4build1) ... 141s Selecting previously unselected package libsz2:ppc64el. 141s Preparing to unpack .../45-libsz2_1.1.3-1_ppc64el.deb ... 141s Unpacking libsz2:ppc64el (1.1.3-1) ... 141s Selecting previously unselected package libhdf5-310:ppc64el. 141s Preparing to unpack .../46-libhdf5-310_1.14.5+repack-3_ppc64el.deb ... 141s Unpacking libhdf5-310:ppc64el (1.14.5+repack-3) ... 141s Selecting previously unselected package libhdf5-hl-310:ppc64el. 141s Preparing to unpack .../47-libhdf5-hl-310_1.14.5+repack-3_ppc64el.deb ... 141s Unpacking libhdf5-hl-310:ppc64el (1.14.5+repack-3) ... 141s Selecting previously unselected package libhwloc15:ppc64el. 141s Preparing to unpack .../48-libhwloc15_2.12.0-1_ppc64el.deb ... 141s Unpacking libhwloc15:ppc64el (2.12.0-1) ... 141s Selecting previously unselected package libjpeg-turbo8:ppc64el. 141s Preparing to unpack .../49-libjpeg-turbo8_2.1.5-3ubuntu2_ppc64el.deb ... 141s Unpacking libjpeg-turbo8:ppc64el (2.1.5-3ubuntu2) ... 141s Selecting previously unselected package libjpeg8:ppc64el. 141s Preparing to unpack .../50-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 141s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 141s Selecting previously unselected package libjsoncpp26:ppc64el. 141s Preparing to unpack .../51-libjsoncpp26_1.9.6-3_ppc64el.deb ... 141s Unpacking libjsoncpp26:ppc64el (1.9.6-3) ... 141s Selecting previously unselected package libkim-api2:ppc64el. 141s Preparing to unpack .../52-libkim-api2_2.3.0-1ubuntu1_ppc64el.deb ... 141s Unpacking libkim-api2:ppc64el (2.3.0-1ubuntu1) ... 141s Selecting previously unselected package liblapack3:ppc64el. 141s Preparing to unpack .../53-liblapack3_3.12.1-2_ppc64el.deb ... 141s Unpacking liblapack3:ppc64el (3.12.1-2) ... 141s Selecting previously unselected package libnetcdf22:ppc64el. 141s Preparing to unpack .../54-libnetcdf22_1%3a4.9.3-1_ppc64el.deb ... 141s Unpacking libnetcdf22:ppc64el (1:4.9.3-1) ... 141s Selecting previously unselected package libmunge2:ppc64el. 141s Preparing to unpack .../55-libmunge2_0.5.16-1_ppc64el.deb ... 141s Unpacking libmunge2:ppc64el (0.5.16-1) ... 141s Selecting previously unselected package libpciaccess0:ppc64el. 141s Preparing to unpack .../56-libpciaccess0_0.17-3build1_ppc64el.deb ... 141s Unpacking libpciaccess0:ppc64el (0.17-3build1) ... 141s Selecting previously unselected package libxnvctrl0:ppc64el. 141s Preparing to unpack .../57-libxnvctrl0_510.47.03-0ubuntu4_ppc64el.deb ... 141s Unpacking libxnvctrl0:ppc64el (510.47.03-0ubuntu4) ... 141s Selecting previously unselected package ocl-icd-libopencl1:ppc64el. 141s Preparing to unpack .../58-ocl-icd-libopencl1_2.3.2-1build1_ppc64el.deb ... 141s Unpacking ocl-icd-libopencl1:ppc64el (2.3.2-1build1) ... 141s Selecting previously unselected package libhwloc-plugins:ppc64el. 141s Preparing to unpack .../59-libhwloc-plugins_2.12.0-1_ppc64el.deb ... 141s Unpacking libhwloc-plugins:ppc64el (2.12.0-1) ... 141s Selecting previously unselected package libpmix2t64:ppc64el. 141s Preparing to unpack .../60-libpmix2t64_5.0.6-5_ppc64el.deb ... 141s Unpacking libpmix2t64:ppc64el (5.0.6-5) ... 141s Selecting previously unselected package libibumad3:ppc64el. 141s Preparing to unpack .../61-libibumad3_56.0-4ubuntu1_ppc64el.deb ... 141s Unpacking libibumad3:ppc64el (56.0-4ubuntu1) ... 141s Selecting previously unselected package libibmad5:ppc64el. 141s Preparing to unpack .../62-libibmad5_56.0-4ubuntu1_ppc64el.deb ... 141s Unpacking libibmad5:ppc64el (56.0-4ubuntu1) ... 141s Selecting previously unselected package libucx0:ppc64el. 141s Preparing to unpack .../63-libucx0_1.18.1+ds-2_ppc64el.deb ... 141s Unpacking libucx0:ppc64el (1.18.1+ds-2) ... 141s Selecting previously unselected package libopenmpi40:ppc64el. 141s Preparing to unpack .../64-libopenmpi40_5.0.7-1_ppc64el.deb ... 141s Unpacking libopenmpi40:ppc64el (5.0.7-1) ... 141s Selecting previously unselected package libpnetcdf6:ppc64el. 141s Preparing to unpack .../65-libpnetcdf6_1.14.0-2_ppc64el.deb ... 141s Unpacking libpnetcdf6:ppc64el (1.14.0-2) ... 141s Selecting previously unselected package libvoro++1. 141s Preparing to unpack .../66-libvoro++1_0.5+revert-to-0.4.6+dfsg1-1_ppc64el.deb ... 141s Unpacking libvoro++1 (0.5+revert-to-0.4.6+dfsg1-1) ... 141s Selecting previously unselected package libogg0:ppc64el. 141s Preparing to unpack .../67-libogg0_1.3.5-3build1_ppc64el.deb ... 141s Unpacking libogg0:ppc64el (1.3.5-3build1) ... 142s Selecting previously unselected package libopengl0:ppc64el. 142s Preparing to unpack .../68-libopengl0_1.7.0-1build1_ppc64el.deb ... 142s Unpacking libopengl0:ppc64el (1.7.0-1build1) ... 142s Selecting previously unselected package proj-data. 142s Preparing to unpack .../69-proj-data_9.5.1-1_all.deb ... 142s Unpacking proj-data (9.5.1-1) ... 142s Selecting previously unselected package libjbig0:ppc64el. 142s Preparing to unpack .../70-libjbig0_2.1-6.1ubuntu2_ppc64el.deb ... 142s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu2) ... 142s Selecting previously unselected package liblerc4:ppc64el. 142s Preparing to unpack .../71-liblerc4_4.0.0+ds-5ubuntu1_ppc64el.deb ... 142s Unpacking liblerc4:ppc64el (4.0.0+ds-5ubuntu1) ... 142s Selecting previously unselected package libsharpyuv0:ppc64el. 142s Preparing to unpack .../72-libsharpyuv0_1.5.0-0.1_ppc64el.deb ... 142s Unpacking libsharpyuv0:ppc64el (1.5.0-0.1) ... 142s Selecting previously unselected package libwebp7:ppc64el. 142s Preparing to unpack .../73-libwebp7_1.5.0-0.1_ppc64el.deb ... 142s Unpacking libwebp7:ppc64el (1.5.0-0.1) ... 142s Selecting previously unselected package libtiff6:ppc64el. 142s Preparing to unpack .../74-libtiff6_4.7.0-3ubuntu1_ppc64el.deb ... 142s Unpacking libtiff6:ppc64el (4.7.0-3ubuntu1) ... 142s Selecting previously unselected package libproj25:ppc64el. 142s Preparing to unpack .../75-libproj25_9.5.1-1_ppc64el.deb ... 142s Unpacking libproj25:ppc64el (9.5.1-1) ... 142s Selecting previously unselected package libtbbbind-2-5:ppc64el. 142s Preparing to unpack .../76-libtbbbind-2-5_2022.0.0-2_ppc64el.deb ... 142s Unpacking libtbbbind-2-5:ppc64el (2022.0.0-2) ... 142s Selecting previously unselected package libtbbmalloc2:ppc64el. 142s Preparing to unpack .../77-libtbbmalloc2_2022.0.0-2_ppc64el.deb ... 142s Unpacking libtbbmalloc2:ppc64el (2022.0.0-2) ... 142s Selecting previously unselected package libtbb12:ppc64el. 142s Preparing to unpack .../78-libtbb12_2022.0.0-2_ppc64el.deb ... 142s Unpacking libtbb12:ppc64el (2022.0.0-2) ... 142s Selecting previously unselected package libtcl8.6:ppc64el. 142s Preparing to unpack .../79-libtcl8.6_8.6.16+dfsg-1_ppc64el.deb ... 142s Unpacking libtcl8.6:ppc64el (8.6.16+dfsg-1) ... 142s Selecting previously unselected package libtheoradec1:ppc64el. 142s Preparing to unpack .../80-libtheoradec1_1.2.0~alpha1+dfsg-6_ppc64el.deb ... 142s Unpacking libtheoradec1:ppc64el (1.2.0~alpha1+dfsg-6) ... 142s Selecting previously unselected package libtheoraenc1:ppc64el. 142s Preparing to unpack .../81-libtheoraenc1_1.2.0~alpha1+dfsg-6_ppc64el.deb ... 142s Unpacking libtheoraenc1:ppc64el (1.2.0~alpha1+dfsg-6) ... 142s Selecting previously unselected package libxft2:ppc64el. 142s Preparing to unpack .../82-libxft2_2.3.6-1build1_ppc64el.deb ... 142s Unpacking libxft2:ppc64el (2.3.6-1build1) ... 142s Selecting previously unselected package x11-common. 142s Preparing to unpack .../83-x11-common_1%3a7.7+23ubuntu4_all.deb ... 142s Unpacking x11-common (1:7.7+23ubuntu4) ... 142s Selecting previously unselected package libxss1:ppc64el. 142s Preparing to unpack .../84-libxss1_1%3a1.2.3-1build3_ppc64el.deb ... 142s Unpacking libxss1:ppc64el (1:1.2.3-1build3) ... 142s Selecting previously unselected package libtk8.6:ppc64el. 142s Preparing to unpack .../85-libtk8.6_8.6.16-1_ppc64el.deb ... 142s Unpacking libtk8.6:ppc64el (8.6.16-1) ... 142s Selecting previously unselected package libvtk9.3:ppc64el. 142s Preparing to unpack .../86-libvtk9.3_9.3.0+dfsg1-4ubuntu1_ppc64el.deb ... 142s Unpacking libvtk9.3:ppc64el (9.3.0+dfsg1-4ubuntu1) ... 143s Selecting previously unselected package liblammps0t64:ppc64el. 143s Preparing to unpack .../87-liblammps0t64_20240207+dfsg-3build3_ppc64el.deb ... 143s Unpacking liblammps0t64:ppc64el (20240207+dfsg-3build3) ... 143s Selecting previously unselected package openmpi-common. 143s Preparing to unpack .../88-openmpi-common_5.0.7-1_all.deb ... 143s Unpacking openmpi-common (5.0.7-1) ... 143s Selecting previously unselected package openmpi-bin. 143s Preparing to unpack .../89-openmpi-bin_5.0.7-1_ppc64el.deb ... 143s Unpacking openmpi-bin (5.0.7-1) ... 143s Selecting previously unselected package mpi-default-bin. 143s Preparing to unpack .../90-mpi-default-bin_1.18_ppc64el.deb ... 143s Unpacking mpi-default-bin (1.18) ... 143s Selecting previously unselected package lammps. 143s Preparing to unpack .../91-lammps_20240207+dfsg-3build3_ppc64el.deb ... 143s Unpacking lammps (20240207+dfsg-3build3) ... 143s Setting up libxcb-dri3-0:ppc64el (1.17.0-2) ... 143s Setting up libtbbmalloc2:ppc64el (2022.0.0-2) ... 143s Setting up libpixman-1-0:ppc64el (0.44.0-3) ... 143s Setting up libsharpyuv0:ppc64el (1.5.0-0.1) ... 143s Setting up libwayland-server0:ppc64el (1.23.1-3) ... 143s Setting up libx11-xcb1:ppc64el (2:1.8.10-2) ... 143s Setting up libpciaccess0:ppc64el (0.17-3build1) ... 143s Setting up libdouble-conversion3:ppc64el (3.3.1-1) ... 143s Setting up libxcb-xfixes0:ppc64el (1.17.0-2) ... 143s Setting up libogg0:ppc64el (1.3.5-3build1) ... 143s Setting up liblerc4:ppc64el (4.0.0+ds-5ubuntu1) ... 143s Setting up proj-data (9.5.1-1) ... 143s Setting up libxrender1:ppc64el (1:0.9.10-1.1build1) ... 143s Setting up lammps-data (20240207+dfsg-3build3) ... 143s Setting up libxcb-render0:ppc64el (1.17.0-2) ... 143s Setting up libevent-pthreads-2.1-7t64:ppc64el (2.1.12-stable-10) ... 143s Setting up libglvnd0:ppc64el (1.7.0-1build1) ... 143s Setting up libxcb-glx0:ppc64el (1.17.0-2) ... 143s Setting up x11-common (1:7.7+23ubuntu4) ... 144s Setting up libibumad3:ppc64el (56.0-4ubuntu1) ... 144s Setting up libdeflate0:ppc64el (1.23-2) ... 144s Setting up libxcb-shm0:ppc64el (1.17.0-2) ... 144s Setting up libibmad5:ppc64el (56.0-4ubuntu1) ... 144s Setting up libgomp1:ppc64el (15-20250404-0ubuntu1) ... 144s Setting up libjbig0:ppc64el (2.1-6.1ubuntu2) ... 144s Setting up libaec0:ppc64el (1.1.3-1) ... 144s Setting up libopengl0:ppc64el (1.7.0-1build1) ... 144s Setting up libxxf86vm1:ppc64el (1:1.1.4-1build4) ... 144s Setting up libxnvctrl0:ppc64el (510.47.03-0ubuntu4) ... 144s Setting up libxcb-present0:ppc64el (1.17.0-2) ... 144s Setting up libtheoraenc1:ppc64el (1.2.0~alpha1+dfsg-6) ... 144s Setting up libblas3:ppc64el (3.12.1-2) ... 144s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 144s Setting up libmunge2:ppc64el (0.5.16-1) ... 144s Setting up libllvm17t64:ppc64el (1:17.0.6-21) ... 144s Setting up libxcb-sync1:ppc64el (1.17.0-2) ... 144s Setting up libjsoncpp26:ppc64el (1.9.6-3) ... 144s Setting up fonts-dejavu-mono (2.37-8) ... 144s Setting up libhwloc15:ppc64el (2.12.0-1) ... 144s Setting up libtcl8.6:ppc64el (8.6.16+dfsg-1) ... 144s Setting up fonts-dejavu-core (2.37-8) ... 144s Setting up libjpeg-turbo8:ppc64el (2.1.5-3ubuntu2) ... 144s Setting up libfftw3-double3:ppc64el (3.3.10-2fakesync1build1) ... 144s Setting up libgfortran5:ppc64el (15-20250404-0ubuntu1) ... 144s Setting up libvulkan1:ppc64el (1.4.309.0-1) ... 144s Setting up libwebp7:ppc64el (1.5.0-0.1) ... 144s Setting up ocl-icd-libopencl1:ppc64el (2.3.2-1build1) ... 144s Setting up libxshmfence1:ppc64el (1.3.3-1) ... 144s Setting up libxcb-randr0:ppc64el (1.17.0-2) ... 144s Setting up openmpi-common (5.0.7-1) ... 144s Setting up librdmacm1t64:ppc64el (56.0-4ubuntu1) ... 144s Setting up libamd-comgr2:ppc64el (6.0+git20231212.4510c28+dfsg-3build2) ... 144s Setting up libxss1:ppc64el (1:1.2.3-1build3) ... 144s Setting up libvoro++1 (0.5+revert-to-0.4.6+dfsg1-1) ... 144s Setting up libhsakmt1:ppc64el (5.7.0-1build1) ... 144s Setting up libsz2:ppc64el (1.1.3-1) ... 144s Setting up libjpeg8:ppc64el (8c-2ubuntu11) ... 144s Setting up libfabric1:ppc64el (1.17.0-3.1) ... 144s Setting up mesa-libgallium:ppc64el (25.0.3-1ubuntu2) ... 144s Setting up liblapack3:ppc64el (3.12.1-2) ... 144s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 144s Setting up libgbm1:ppc64el (25.0.3-1ubuntu2) ... 144s Setting up fontconfig-config (2.15.0-2.2ubuntu1) ... 144s Setting up libgl1-mesa-dri:ppc64el (25.0.3-1ubuntu2) ... 144s Setting up libkim-api2:ppc64el (2.3.0-1ubuntu1) ... 144s Setting up libhwloc-plugins:ppc64el (2.12.0-1) ... 144s Setting up libtbbbind-2-5:ppc64el (2022.0.0-2) ... 144s Setting up libpmix2t64:ppc64el (5.0.6-5) ... 144s Setting up libhdf5-310:ppc64el (1.14.5+repack-3) ... 144s Setting up libtiff6:ppc64el (4.7.0-3ubuntu1) ... 144s Setting up libhsa-runtime64-1 (5.7.1-2build1) ... 144s Setting up libfontconfig1:ppc64el (2.15.0-2.2ubuntu1) ... 144s Setting up libhdf5-hl-310:ppc64el (1.14.5+repack-3) ... 144s Setting up libxft2:ppc64el (2.3.6-1build1) ... 144s Setting up libglx-mesa0:ppc64el (25.0.3-1ubuntu2) ... 144s Setting up libglx0:ppc64el (1.7.0-1build1) ... 144s Setting up libproj25:ppc64el (9.5.1-1) ... 144s Setting up libtk8.6:ppc64el (8.6.16-1) ... 144s Setting up libnetcdf22:ppc64el (1:4.9.3-1) ... 144s Setting up libtbb12:ppc64el (2022.0.0-2) ... 144s Setting up libcairo2:ppc64el (1.18.4-1) ... 144s Setting up libgl1:ppc64el (1.7.0-1build1) ... 144s Setting up libamdhip64-5 (5.7.1-5.1) ... 144s Setting up libtheoradec1:ppc64el (1.2.0~alpha1+dfsg-6) ... 144s Setting up libglew2.2:ppc64el (2.2.0-4build1) ... 144s Setting up libucx0:ppc64el (1.18.1+ds-2) ... 144s Setting up libgl2ps1.4 (1.4.2+dfsg1-2build1) ... 144s Setting up libopenmpi40:ppc64el (5.0.7-1) ... 144s Setting up libpnetcdf6:ppc64el (1.14.0-2) ... 144s Setting up libvtk9.3:ppc64el (9.3.0+dfsg1-4ubuntu1) ... 144s Setting up openmpi-bin (5.0.7-1) ... 144s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 144s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 144s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 144s Setting up mpi-default-bin (1.18) ... 144s Setting up liblammps0t64:ppc64el (20240207+dfsg-3build3) ... 144s Setting up lammps (20240207+dfsg-3build3) ... 144s Processing triggers for man-db (2.13.0-1) ... 144s Processing triggers for libc-bin (2.41-6ubuntu1) ... 145s autopkgtest [08:54:31]: test crack: [----------------------- 146s LAMMPS (7 Feb 2024 - Update 1) 146s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 146s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 146s using 1 OpenMP thread(s) per MPI task 146s Lattice spacing in x,y,z = 1.1142771 1.9299846 1.1142771 146s Created orthogonal box = (0 0 -0.27856928) to (111.42771 77.199383 0.27856928) 146s 2 by 1 by 1 MPI processor grid 146s Created 8141 atoms 146s using lattice units in orthogonal box = (-0.011142771 -0.0077199383 -0.27856928) to (111.43885 77.207103 0.27856928) 146s create_atoms CPU = 0.001 seconds 146s 302 atoms in group lower 146s 302 atoms in group upper 146s 604 atoms in group boundary 146s 7537 atoms in group mobile 146s 841 atoms in group leftupper 146s 841 atoms in group leftlower 146s Setting atom values ... 146s 841 settings made for type 146s Setting atom values ... 146s 841 settings made for type 146s Setting atom values ... 146s 302 settings made for type 146s Setting atom values ... 146s 302 settings made for type 146s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 146s Generated 0 of 10 mixed pair_coeff terms from geometric mixing rule 146s Neighbor list info ... 146s update: every = 1 steps, delay = 5 steps, check = yes 146s max neighbors/atom: 2000, page size: 100000 146s master list distance cutoff = 2.8 146s ghost atom cutoff = 2.8 146s binsize = 1.4, bins = 80 56 1 146s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 146s (1) pair lj/cut, perpetual 146s attributes: half, newton on 146s pair build: half/bin/atomonly/newton 146s stencil: half/bin/2d 146s bin: standard 146s Setting up Verlet run ... 146s Unit style : lj 146s Current step : 0 146s Time step : 0.003 146s Per MPI rank memory allocation (min/avg/max) = 3.097 | 3.097 | 3.097 Mbytes 146s Step Temp E_pair E_mol TotEng Press Volume 146s 0 0.065993465 -3.2595015 0 -3.1984123 -0.035939913 8605.5917 146s 200 0.060035253 -3.2531886 0 -3.1976149 -0.22757684 8638.5331 146s 400 0.06054278 -3.2510706 0 -3.1950271 -0.42811733 8677.8288 146s 600 0.060576995 -3.246816 0 -3.1907408 -0.60017647 8717.6131 146s 800 0.060802753 -3.2413477 0 -3.1850635 -0.74499308 8756.4512 146s 1000 0.061812114 -3.2349942 0 -3.1777756 -0.87130079 8796.9575 147s 1200 0.06317147 -3.2277552 0 -3.1692783 -0.98010628 8823.1488 147s 1400 0.065125405 -3.2198031 0 -3.1595175 -1.0690179 8858.8358 147s 1600 0.06725411 -3.2111272 0 -3.148871 -1.1440993 8892.6607 147s 1800 0.069389572 -3.2019689 0 -3.137736 -1.199078 8933.7591 147s 2000 0.071276448 -3.1921621 0 -3.1261826 -1.239553 8969.0463 147s 2200 0.073243486 -3.1818809 0 -3.1140805 -1.264839 8997.6559 147s 2400 0.075063494 -3.1711703 0 -3.1016851 -1.2772278 9038.4932 148s 2600 0.076789207 -3.1600658 0 -3.0889832 -1.2754953 9073.4997 148s 2800 0.07875979 -3.1487143 0 -3.0758075 -1.2637926 9106.2245 148s 3000 0.080591853 -3.1372361 0 -3.0626334 -1.2388824 9142.7862 148s 3200 0.08227693 -3.125423 0 -3.0492605 -1.2055283 9169.4322 148s 3400 0.084289444 -3.1136554 0 -3.03563 -1.1672422 9204.8205 148s 3600 0.086720297 -3.1021183 0 -3.0218427 -1.126381 9233.2656 148s 3800 0.089264018 -3.0909262 0 -3.0082959 -1.0899774 9265.4143 149s 4000 0.091377688 -3.0795096 0 -2.9949227 -1.0580229 9297.6799 149s 4200 0.092665135 -3.0678736 0 -2.9820949 -1.0390124 9331.6135 149s 4400 0.09055434 -3.0560482 0 -2.9722234 -1.0323741 9362.2075 149s 4600 0.088763719 -3.0446018 0 -2.9624346 -1.027693 9391.6949 149s 4800 0.089467982 -3.0337452 0 -2.950926 -1.0232092 9427.4155 149s 5000 0.089910902 -3.0237571 0 -2.9405279 -1.0174796 9452.031 149s Loop time of 3.72872 on 2 procs for 5000 steps with 8141 atoms 149s 149s Performance: 347572.586 tau/day, 1340.944 timesteps/s, 10.917 Matom-step/s 149s 98.8% CPU use with 2 MPI tasks x 1 OpenMP threads 149s 149s MPI task timing breakdown: 149s Section | min time | avg time | max time |%varavg| %total 149s --------------------------------------------------------------- 149s Pair | 2.8294 | 2.9227 | 3.0159 | 5.5 | 78.38 149s Neigh | 0.13303 | 0.13389 | 0.13474 | 0.2 | 3.59 149s Comm | 0.20026 | 0.29429 | 0.38832 | 17.3 | 7.89 149s Output | 0.0011596 | 0.0022368 | 0.003314 | 2.3 | 0.06 149s Modify | 0.25731 | 0.26893 | 0.28055 | 2.2 | 7.21 149s Other | | 0.1067 | | | 2.86 149s 149s Nlocal: 4070.5 ave 4085 max 4056 min 149s Histogram: 1 0 0 0 0 0 0 0 0 1 149s Nghost: 207 ave 208 max 206 min 149s Histogram: 1 0 0 0 0 0 0 0 0 1 149s Neighs: 35700 ave 35927 max 35473 min 149s Histogram: 1 0 0 0 0 0 0 0 0 1 149s 149s Total # of neighbors = 71400 149s Ave neighs/atom = 8.7704213 149s Neighbor list builds = 106 149s Dangerous builds = 0 149s Total wall time: 0:00:03 149s LAMMPS (7 Feb 2024 - Update 1) 156s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 156s using 1 OpenMP thread(s) per MPI task 156s Lattice spacing in x,y,z = 1.1142771 1.9299846 1.1142771 156s Created orthogonal box = (0 0 -0.27856928) to (111.42771 77.199383 0.27856928) 156s 1 by 1 by 1 MPI processor grid 156s Created 8141 atoms 156s using lattice units in orthogonal box = (-0.011142771 -0.0077199383 -0.27856928) to (111.43885 77.207103 0.27856928) 156s create_atoms CPU = 0.001 seconds 156s 302 atoms in group lower 156s 302 atoms in group upper 156s 604 atoms in group boundary 156s 7537 atoms in group mobile 156s 841 atoms in group leftupper 156s 841 atoms in group leftlower 156s Setting atom values ... 156s 841 settings made for type 156s Setting atom values ... 156s 841 settings made for type 156s Setting atom values ... 156s 302 settings made for type 156s Setting atom values ... 156s 302 settings made for type 156s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 156s Generated 0 of 10 mixed pair_coeff terms from geometric mixing rule 156s Neighbor list info ... 156s update: every = 1 steps, delay = 5 steps, check = yes 156s max neighbors/atom: 2000, page size: 100000 156s master list distance cutoff = 2.8 156s ghost atom cutoff = 2.8 156s binsize = 1.4, bins = 80 56 1 156s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 156s (1) pair lj/cut, perpetual 156s attributes: half, newton on 156s pair build: half/bin/atomonly/newton 156s stencil: half/bin/2d 156s bin: standard 156s Setting up Verlet run ... 156s Unit style : lj 156s Current step : 0 156s Time step : 0.003 156s Per MPI rank memory allocation (min/avg/max) = 3.112 | 3.112 | 3.112 Mbytes 156s Step Temp E_pair E_mol TotEng Press Volume 156s 0 0.065651733 -3.2595015 0 -3.1987287 -0.036239172 8605.5917 156s 200 0.060086376 -3.2531936 0 -3.1975725 -0.23125026 8638.8101 156s 400 0.060533553 -3.2509973 0 -3.1949623 -0.4305406 8679.2464 156s 600 0.06082965 -3.2466949 0 -3.1903858 -0.6028531 8716.7569 156s 800 0.061677224 -3.2413215 0 -3.1842278 -0.7482749 8756.226 156s 1000 0.062383731 -3.2349273 0 -3.1771796 -0.87425132 8793.1116 156s 1200 0.063709246 -3.2276094 0 -3.1686347 -0.98020161 8828.8863 156s 1400 0.065404552 -3.2196608 0 -3.1591168 -1.0695384 8866.4893 156s 1600 0.067579602 -3.2110378 0 -3.1484804 -1.1456387 8900.6772 156s 1800 0.069324241 -3.2018536 0 -3.1376812 -1.2020999 8933.017 156s 2000 0.071014927 -3.1921108 0 -3.1263733 -1.2430105 8963.9853 156s 2200 0.072992881 -3.1818701 0 -3.1143017 -1.2701297 9004.4136 156s 2400 0.075000723 -3.1712313 0 -3.1018043 -1.2830866 9034.9991 156s 2600 0.076843477 -3.1601004 0 -3.0889675 -1.27924 9072.1325 156s 2800 0.078671706 -3.1487747 0 -3.0759495 -1.2659604 9103.9526 156s 3000 0.080713586 -3.1373277 0 -3.0626123 -1.2440673 9134.552 156s 3200 0.08309469 -3.1260242 0 -3.0491047 -1.214547 9169.0003 156s 3400 0.085424766 -3.1146623 0 -3.0355859 -1.1839326 9206.909 156s 3600 0.087396485 -3.1029493 0 -3.0220477 -1.143412 9233.783 156s 3800 0.089007987 -3.090822 0 -3.0084286 -1.1000791 9259.0348 156s 4000 0.089813071 -3.0794078 0 -2.9962692 -1.062847 9281.82 156s 4200 0.08584753 -3.0668559 0 -2.9873882 -1.037972 9308.8113 156s 4400 0.086197517 -3.0559678 0 -2.9761761 -1.028843 9328.9666 156s 4600 0.086766447 -3.0437627 0 -2.9634443 -1.0208785 9361.9925 156s 4800 0.088195149 -3.0328502 0 -2.9512093 -1.0272063 9395.6122 156s 5000 0.089415266 -3.0228825 0 -2.9401122 -1.0215336 9436.1637 156s Loop time of 6.64559 on 1 procs for 5000 steps with 8141 atoms 156s 156s Performance: 195016.560 tau/day, 752.379 timesteps/s, 6.125 Matom-step/s 156s 99.9% CPU use with 1 MPI tasks x 1 OpenMP threads 156s 156s MPI task timing breakdown: 156s Section | min time | avg time | max time |%varavg| %total 156s --------------------------------------------------------------- 156s Pair | 5.7599 | 5.7599 | 5.7599 | 0.0 | 86.67 156s Neigh | 0.2439 | 0.2439 | 0.2439 | 0.0 | 3.67 156s Comm | 0.0043213 | 0.0043213 | 0.0043213 | 0.0 | 0.07 156s Output | 0.0016653 | 0.0016653 | 0.0016653 | 0.0 | 0.03 156s Modify | 0.51047 | 0.51047 | 0.51047 | 0.0 | 7.68 156s Other | | 0.1254 | | | 1.89 156s 156s Nlocal: 8141 ave 8141 max 8141 min 156s Histogram: 1 0 0 0 0 0 0 0 0 0 156s Nghost: 0 ave 0 max 0 min 156s Histogram: 1 0 0 0 0 0 0 0 0 0 156s Neighs: 71389 ave 71389 max 71389 min 156s Histogram: 1 0 0 0 0 0 0 0 0 0 156s 156s Total # of neighbors = 71389 156s Ave neighs/atom = 8.7690701 156s Neighbor list builds = 100 156s Dangerous builds = 0 156s Total wall time: 0:00:06 156s run: OK 156s autopkgtest [08:54:42]: test crack: -----------------------] 157s crack PASS 157s autopkgtest [08:54:43]: test crack: - - - - - - - - - - results - - - - - - - - - - 157s autopkgtest [08:54:43]: test dipole: preparing testbed 157s Reading package lists... 158s Building dependency tree... 158s Reading state information... 158s Starting pkgProblemResolver with broken count: 0 158s Starting 2 pkgProblemResolver with broken count: 0 158s Done 158s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 159s autopkgtest [08:54:45]: test dipole: [----------------------- 159s LAMMPS (7 Feb 2024 - Update 1) 159s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 159s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 159s using 1 OpenMP thread(s) per MPI task 159s WARNING: Atom style hybrid defines both, per-type and per-atom masses; both must be set, but only per-atom masses will be used (src/atom_vec_hybrid.cpp:132) 159s Lattice spacing in x,y,z = 1.6903085 1.6903085 1.6903085 159s Created orthogonal box = (0 0 -0.84515425) to (16.903085 16.903085 0.84515425) 159s 2 by 1 by 1 MPI processor grid 159s Created 200 atoms 159s using lattice units in orthogonal box = (0 0 -0.84515425) to (16.903085 16.903085 0.84515425) 159s create_atoms CPU = 0.000 seconds 159s Setting atom values ... 159s 200 settings made for mass 159s Setting atom values ... 159s 200 settings made for dipole/random 159s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 159s Neighbor list info ... 159s update: every = 1 steps, delay = 0 steps, check = yes 159s max neighbors/atom: 2000, page size: 100000 159s master list distance cutoff = 2.8 159s ghost atom cutoff = 2.8 159s binsize = 1.4, bins = 13 13 2 159s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 159s (1) pair lj/cut/dipole/cut, perpetual 159s attributes: half, newton on 159s pair build: half/bin/atomonly/newton 159s stencil: half/bin/2d 159s bin: standard 159s Setting up Verlet run ... 159s Unit style : lj 159s Current step : 0 159s Time step : 0.005 159s Per MPI rank memory allocation (min/avg/max) = 5.049 | 5.049 | 5.049 Mbytes 159s Step Temp E_pair c_erot TotEng Press 159s 0 0 -2.0965715 0 -2.0965715 -2.4759659 159s 500 0.37155664 -2.7150631 0.22689419 -2.3453642 -0.33510922 159s 1000 0.42354552 -2.749888 0.21162528 -2.3284602 -0.11120147 159s 1500 0.39778312 -2.7597475 0.24737266 -2.3639533 -0.33856086 159s 2000 0.44906518 -2.8037483 0.24422519 -2.3569284 0.15010152 159s 2500 0.46056435 -2.8144144 0.25015831 -2.3561529 -0.38358808 159s 3000 0.4348415 -2.7856362 0.24988108 -2.3529689 0.086257242 159s 3500 0.41528069 -2.7415634 0.22418981 -2.3283591 0.13066802 159s 4000 0.40006774 -2.7153553 0.22170678 -2.3172879 -0.17425321 160s 4500 0.45764976 -2.7751555 0.2288386 -2.319794 -0.22228559 160s 5000 0.45119236 -2.7437941 0.21642728 -2.2948577 0.086840364 160s 5500 0.41805158 -2.7191643 0.2405108 -2.303203 -0.20373032 160s 6000 0.41353959 -2.73374 0.26555768 -2.3222681 0.013197521 160s 6500 0.46952638 -2.7206692 0.19356607 -2.2534905 -0.32099423 160s 7000 0.4308564 -2.6963241 0.21298331 -2.2676219 0.11638995 160s 7500 0.44328381 -2.767933 0.28845767 -2.3268656 -0.055714929 160s 8000 0.48149201 -2.7648936 0.25607634 -2.2858091 -0.24833472 160s 8500 0.44641155 -2.735761 0.26866772 -2.2915815 -0.11006786 160s 9000 0.45443104 -2.70388 0.2307522 -2.2517211 -0.077100374 160s 9500 0.42544663 -2.6959692 0.25023057 -2.2726498 -0.04183171 160s 10000 0.42622279 -2.6434464 0.2125908 -2.2193547 0.052056849 160s Loop time of 0.601614 on 2 procs for 10000 steps with 200 atoms 160s 160s Performance: 7180689.630 tau/day, 16621.967 timesteps/s, 3.324 Matom-step/s 160s 99.4% CPU use with 2 MPI tasks x 1 OpenMP threads 160s 160s MPI task timing breakdown: 160s Section | min time | avg time | max time |%varavg| %total 160s --------------------------------------------------------------- 160s Pair | 0.32723 | 0.36854 | 0.40985 | 6.8 | 61.26 160s Neigh | 0.019435 | 0.021489 | 0.023543 | 1.4 | 3.57 160s Comm | 0.10908 | 0.15161 | 0.19414 | 10.9 | 25.20 160s Output | 0.00047543 | 0.00093571 | 0.001396 | 0.0 | 0.16 160s Modify | 0.032591 | 0.034006 | 0.03542 | 0.8 | 5.65 160s Other | | 0.02504 | | | 4.16 160s 160s Nlocal: 100 ave 104 max 96 min 160s Histogram: 1 0 0 0 0 0 0 0 0 1 160s Nghost: 123.5 ave 124 max 123 min 160s Histogram: 1 0 0 0 0 0 0 0 0 1 160s Neighs: 820 ave 885 max 755 min 160s Histogram: 1 0 0 0 0 0 0 0 0 1 160s 160s Total # of neighbors = 1640 160s Ave neighs/atom = 8.2 160s Neighbor list builds = 697 160s Dangerous builds = 0 160s Total wall time: 0:00:00 160s LAMMPS (7 Feb 2024 - Update 1) 161s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 161s using 1 OpenMP thread(s) per MPI task 161s WARNING: Atom style hybrid defines both, per-type and per-atom masses; both must be set, but only per-atom masses will be used (src/atom_vec_hybrid.cpp:132) 161s Lattice spacing in x,y,z = 1.6903085 1.6903085 1.6903085 161s Created orthogonal box = (0 0 -0.84515425) to (16.903085 16.903085 0.84515425) 161s 1 by 1 by 1 MPI processor grid 161s Created 200 atoms 161s using lattice units in orthogonal box = (0 0 -0.84515425) to (16.903085 16.903085 0.84515425) 161s create_atoms CPU = 0.000 seconds 161s Setting atom values ... 161s 200 settings made for mass 161s Setting atom values ... 161s 200 settings made for dipole/random 161s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 161s Neighbor list info ... 161s update: every = 1 steps, delay = 0 steps, check = yes 161s max neighbors/atom: 2000, page size: 100000 161s master list distance cutoff = 2.8 161s ghost atom cutoff = 2.8 161s binsize = 1.4, bins = 13 13 2 161s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 161s (1) pair lj/cut/dipole/cut, perpetual 161s attributes: half, newton on 161s pair build: half/bin/atomonly/newton 161s stencil: half/bin/2d 161s bin: standard 161s Setting up Verlet run ... 161s Unit style : lj 161s Current step : 0 161s Time step : 0.005 161s Per MPI rank memory allocation (min/avg/max) = 5.05 | 5.05 | 5.05 Mbytes 161s Step Temp E_pair c_erot TotEng Press 161s 0 0 -2.0965715 0 -2.0965715 -2.4759659 161s 500 0.37155664 -2.7150631 0.22689419 -2.3453642 -0.33510922 161s 1000 0.42354552 -2.749888 0.21162528 -2.3284602 -0.11120147 161s 1500 0.39778312 -2.7597475 0.24737266 -2.3639533 -0.33856087 161s 2000 0.44906137 -2.8037446 0.24422529 -2.3569285 0.15012276 161s 2500 0.46036094 -2.8144628 0.25011505 -2.3564037 -0.37955581 161s 3000 0.44916796 -2.7986738 0.24197589 -2.3517517 -0.23759595 161s 3500 0.43708892 -2.7404913 0.20046667 -2.3055878 -0.068108938 161s 4000 0.4277424 -2.7516171 0.22285533 -2.3260134 -0.38856067 161s 4500 0.41051154 -2.7253155 0.22244047 -2.3168566 -0.56435269 161s 5000 0.3930005 -2.7393881 0.26645487 -2.3483526 -0.14501759 161s 5500 0.48374634 -2.7361451 0.17785357 -2.2548175 -0.23588662 161s 6000 0.44341889 -2.7200909 0.2049925 -2.2788891 0.30169398 161s 6500 0.45604374 -2.7449044 0.23816385 -2.2911408 -0.02615159 161s 7000 0.41178901 -2.7023053 0.24691126 -2.2925752 -0.089298567 161s 7500 0.49214202 -2.7631906 0.22991178 -2.2735093 -0.21670068 161s 8000 0.51272822 -2.7861027 0.23867667 -2.2759381 -0.054576195 161s 8500 0.3942697 -2.6555823 0.23621182 -2.263284 -0.15323416 161s 9000 0.44393797 -2.7051517 0.23305036 -2.2634334 -0.32144821 161s 9500 0.49155958 -2.757627 0.23397146 -2.2685252 0.083278026 161s 10000 0.49343489 -2.7193593 0.19771681 -2.2283916 -0.10873755 161s Loop time of 0.940137 on 1 procs for 10000 steps with 200 atoms 161s 161s Performance: 4595074.240 tau/day, 10636.746 timesteps/s, 2.127 Matom-step/s 161s 99.4% CPU use with 1 MPI tasks x 1 OpenMP threads 161s 161s MPI task timing breakdown: 161s Section | min time | avg time | max time |%varavg| %total 161s --------------------------------------------------------------- 161s Pair | 0.76095 | 0.76095 | 0.76095 | 0.0 | 80.94 161s Neigh | 0.043547 | 0.043547 | 0.043547 | 0.0 | 4.63 161s Comm | 0.041534 | 0.041534 | 0.041534 | 0.0 | 4.42 161s Output | 0.00041028 | 0.00041028 | 0.00041028 | 0.0 | 0.04 161s Modify | 0.07689 | 0.07689 | 0.07689 | 0.0 | 8.18 161s Other | | 0.01681 | | | 1.79 161s 161s Nlocal: 200 ave 200 max 200 min 161s Histogram: 1 0 0 0 0 0 0 0 0 0 161s Nghost: 155 ave 155 max 155 min 161s Histogram: 1 0 0 0 0 0 0 0 0 0 161s Neighs: 1664 ave 1664 max 1664 min 161s Histogram: 1 0 0 0 0 0 0 0 0 0 161s 161s Total # of neighbors = 1664 161s Ave neighs/atom = 8.32 161s Neighbor list builds = 697 161s Dangerous builds = 0 161s Total wall time: 0:00:00 161s run: OK 161s autopkgtest [08:54:47]: test dipole: -----------------------] 162s dipole PASS 162s autopkgtest [08:54:48]: test dipole: - - - - - - - - - - results - - - - - - - - - - 162s autopkgtest [08:54:48]: test ellipse: preparing testbed 162s Reading package lists... 162s Building dependency tree... 162s Reading state information... 163s Starting pkgProblemResolver with broken count: 0 163s Starting 2 pkgProblemResolver with broken count: 0 163s Done 163s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 164s autopkgtest [08:54:50]: test ellipse: [----------------------- 164s LAMMPS (7 Feb 2024 - Update 1) 164s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 164s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 164s using 1 OpenMP thread(s) per MPI task 164s Lattice spacing in x,y,z = 7.0710678 7.0710678 7.0710678 164s Created orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 164s 2 by 1 by 1 MPI processor grid 164s Created 400 atoms 164s using lattice units in orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 164s create_atoms CPU = 0.001 seconds 164s Setting atom values ... 164s 29 settings made for type/fraction 164s Setting atom values ... 164s 371 settings made for mass 164s Setting atom values ... 164s 29 settings made for mass 164s Setting atom values ... 164s 371 settings made for shape 164s Setting atom values ... 164s 29 settings made for shape 164s Setting atom values ... 164s 400 settings made for quat/random 164s 371 atoms in group spheroid 164s 164s CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE 164s 164s Your simulation uses code contributions which should be cited: 164s - pair gayberne command: doi:10.1063/1.3058435 164s The log file lists these citations in BibTeX format. 164s 164s CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE 164s 164s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 164s Neighbor list info ... 164s update: every = 1 steps, delay = 0 steps, check = yes 164s max neighbors/atom: 2000, page size: 100000 164s master list distance cutoff = 4.8 164s ghost atom cutoff = 4.8 164s binsize = 2.4, bins = 59 59 3 164s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 164s (1) pair gayberne, perpetual 164s attributes: half, newton on 164s pair build: half/bin/atomonly/newton 164s stencil: half/bin/2d 164s bin: standard 164s Setting up Verlet run ... 164s Unit style : lj 164s Current step : 0 164s Time step : 0.002 164s Per MPI rank memory allocation (min/avg/max) = 4.744 | 4.744 | 4.744 Mbytes 164s Step c_rot E_pair TotEng Press Volume 164s 0 2.3158404 0 2.394 0.04788 20000 164s 100 1.7101139 0 1.7678302 0.034413192 20548.286 164s 200 2.3115592 0 2.3895743 0.04649702 20556.796 164s 300 1.831333 0 1.8931405 0.041256922 18354.646 164s 400 2.1838099 -0.00017499954 2.2573384 0.066506278 13574.023 164s 500 1.9604824 -0.024753591 2.0018228 0.09726581 8392.5882 164s 600 1.983652 -0.13957983 1.858954 0.28044314 4590.4733 164s 700 2.0349282 -0.7537042 1.2545559 0.45904399 2452.437 164s 800 2.1883376 -1.7033514 0.37402366 1.4284826 1377.0458 164s 900 1.8893439 -3.2012297 -1.3190748 3.1235376 889.49388 164s 1000 1.5818588 -4.6980931 -3.1320854 3.6494701 700.71079 164s 1100 1.743968 -5.3117051 -3.573368 1.7907876 666.1204 164s 1200 2.1788951 -5.0690852 -2.8893841 1.0317884 697.08645 164s 1300 2.0067166 -4.6588703 -2.6387448 -0.19855863 763.72651 164s 1400 2.1020191 -4.2786372 -2.1756186 0.5410189 815.37712 164s 1500 1.805494 -4.1713612 -2.3732785 0.88817983 855.41486 164s 1600 2.1414975 -3.9792878 -1.8690882 0.79530679 899.00645 164s 1700 1.9971755 -3.8166601 -1.8380659 0.41343091 945.60821 164s 1800 2.0033499 -3.7524192 -1.7481879 0.76104974 973.71402 164s 1900 2.0083456 -3.7603247 -1.7442111 0.74095065 988.03964 164s 2000 1.952518 -3.6531717 -1.7078819 0.50248125 989.96894 164s Loop time of 0.581687 on 2 procs for 2000 steps with 400 atoms 164s 164s Performance: 594133.661 tau/day, 3438.274 timesteps/s, 1.375 Matom-step/s 164s 97.0% CPU use with 2 MPI tasks x 1 OpenMP threads 164s 164s MPI task timing breakdown: 164s Section | min time | avg time | max time |%varavg| %total 164s --------------------------------------------------------------- 164s Pair | 0.25157 | 0.31183 | 0.37209 | 10.8 | 53.61 164s Neigh | 0.013208 | 0.013657 | 0.014106 | 0.4 | 2.35 164s Comm | 0.034079 | 0.094953 | 0.15583 | 19.8 | 16.32 164s Output | 0.017396 | 0.017522 | 0.017649 | 0.1 | 3.01 164s Modify | 0.12646 | 0.13022 | 0.13397 | 1.0 | 22.39 164s Other | | 0.01351 | | | 2.32 164s 164s Nlocal: 200 ave 211 max 189 min 164s Histogram: 1 0 0 0 0 0 0 0 0 1 164s Nghost: 215 ave 217 max 213 min 164s Histogram: 1 0 0 0 0 0 0 0 0 1 164s Neighs: 1561 ave 1651 max 1471 min 164s Histogram: 1 0 0 0 0 0 0 0 0 1 164s 164s Total # of neighbors = 3122 164s Ave neighs/atom = 7.805 164s Neighbor list builds = 346 164s Dangerous builds = 0 164s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 164s Setting up Verlet run ... 164s Unit style : lj 164s Current step : 2000 164s Time step : 0.002 164s Per MPI rank memory allocation (min/avg/max) = 6.899 | 6.899 | 6.899 Mbytes 164s Step c_rot E_pair TotEng Press Volume 164s 2000 1.952518 -3.6531717 -1.7078819 0.50248125 989.96894 164s 2100 1.9040485 -3.6005672 -1.6802923 0.39862439 989.96894 164s 2200 1.8951971 -3.5921565 -1.6947174 1.0260215 989.96894 164s 2300 2.0029242 -3.7081932 -1.6838651 0.66970247 989.96894 164s 2400 2.0271892 -3.7314226 -1.7100026 0.89700311 989.96894 165s 2500 2.0661249 -3.7753498 -1.7024133 0.57670823 989.96894 165s 2600 2.0610735 -3.7707906 -1.7111976 0.90913324 989.96894 165s 2700 2.0505182 -3.759913 -1.7337449 0.65661806 989.96894 165s 2800 2.1106611 -3.8219493 -1.7370736 0.55275858 989.96894 165s 2900 2.0346954 -3.7427335 -1.7135138 0.69791414 989.96894 165s 3000 2.0331857 -3.7398391 -1.751581 0.051416398 989.96894 165s 3100 1.9983775 -3.7074162 -1.7156494 0.75643227 989.96894 165s 3200 2.1297315 -3.8450391 -1.7173438 1.0595574 989.96894 165s 3300 2.0798058 -3.793496 -1.6857257 1.1572151 989.96894 165s 3400 2.1441179 -3.8596018 -1.7011723 0.61261295 989.96894 165s 3500 2.1035108 -3.8190033 -1.6997662 0.99653756 989.96894 165s 3600 2.0856923 -3.7988484 -1.7184312 1.1264485 989.96894 165s 3700 2.1029212 -3.8148833 -1.7096948 0.96828131 989.96894 165s 3800 2.0253659 -3.7349822 -1.7382292 0.56254829 989.96894 165s 3900 1.9686055 -3.6775217 -1.7283017 1.2472863 989.96894 165s 4000 2.0951026 -3.8095594 -1.6876041 0.79798093 989.96894 165s Loop time of 0.519309 on 2 procs for 2000 steps with 400 atoms 165s 165s Performance: 665499.246 tau/day, 3851.269 timesteps/s, 1.541 Matom-step/s 165s 97.8% CPU use with 2 MPI tasks x 1 OpenMP threads 165s 165s MPI task timing breakdown: 165s Section | min time | avg time | max time |%varavg| %total 165s --------------------------------------------------------------- 165s Pair | 0.36277 | 0.36366 | 0.36454 | 0.1 | 70.03 165s Neigh | 0.0032867 | 0.0037336 | 0.0041806 | 0.7 | 0.72 165s Comm | 0.041412 | 0.042386 | 0.04336 | 0.5 | 8.16 165s Output | 0.017255 | 0.01739 | 0.017526 | 0.1 | 3.35 165s Modify | 0.068943 | 0.077837 | 0.086731 | 3.2 | 14.99 165s Other | | 0.01431 | | | 2.75 165s 165s Nlocal: 200 ave 227 max 173 min 165s Histogram: 1 0 0 0 0 0 0 0 0 1 165s Nghost: 211 ave 219 max 203 min 165s Histogram: 1 0 0 0 0 0 0 0 0 1 165s Neighs: 1650.5 ave 1950 max 1351 min 165s Histogram: 1 0 0 0 0 0 0 0 0 1 165s 165s Total # of neighbors = 3301 165s Ave neighs/atom = 8.2525 165s Neighbor list builds = 49 165s Dangerous builds = 0 165s Total wall time: 0:00:01 165s LAMMPS (7 Feb 2024 - Update 1) 166s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 166s using 1 OpenMP thread(s) per MPI task 166s Lattice spacing in x,y,z = 7.0710678 7.0710678 7.0710678 166s Created orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 166s 1 by 1 by 1 MPI processor grid 166s Created 400 atoms 166s using lattice units in orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 166s create_atoms CPU = 0.000 seconds 166s Setting atom values ... 166s 29 settings made for type/fraction 166s Setting atom values ... 166s 371 settings made for mass 166s Setting atom values ... 166s 29 settings made for mass 166s Setting atom values ... 166s 371 settings made for shape 166s Setting atom values ... 166s 29 settings made for shape 166s Setting atom values ... 166s 400 settings made for quat/random 166s 371 atoms in group spheroid 166s 166s CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE 166s 166s Your simulation uses code contributions which should be cited: 166s - pair gayberne command: doi:10.1063/1.3058435 166s The log file lists these citations in BibTeX format. 166s 166s CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE-CITE 166s 166s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 166s Neighbor list info ... 166s update: every = 1 steps, delay = 0 steps, check = yes 166s max neighbors/atom: 2000, page size: 100000 166s master list distance cutoff = 4.8 166s ghost atom cutoff = 4.8 166s binsize = 2.4, bins = 59 59 3 166s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 166s (1) pair gayberne, perpetual 166s attributes: half, newton on 166s pair build: half/bin/atomonly/newton 166s stencil: half/bin/2d 166s bin: standard 166s Setting up Verlet run ... 166s Unit style : lj 166s Current step : 0 166s Time step : 0.002 166s Per MPI rank memory allocation (min/avg/max) = 4.753 | 4.753 | 4.753 Mbytes 166s Step c_rot E_pair TotEng Press Volume 166s 0 2.3158404 0 2.394 0.04788 20000 166s 100 1.7101139 0 1.7678302 0.034413192 20548.286 166s 200 2.3115592 0 2.3895743 0.04649702 20556.796 166s 300 1.831333 0 1.8931405 0.041256922 18354.646 166s 400 2.1838099 -0.00017499954 2.2573384 0.066506278 13574.023 166s 500 1.9604824 -0.024753591 2.0018228 0.09726581 8392.5882 166s 600 1.983652 -0.13957983 1.858954 0.28044314 4590.4733 166s 700 2.0349282 -0.7537042 1.2545559 0.45904399 2452.437 166s 800 2.1883376 -1.7033514 0.37402366 1.4284826 1377.0458 166s 900 1.8893439 -3.2012297 -1.3190748 3.1235376 889.49388 166s 1000 1.5818588 -4.6980931 -3.1320854 3.6494701 700.71079 166s 1100 1.743968 -5.3117051 -3.573368 1.7907876 666.1204 166s 1200 2.1788951 -5.0690852 -2.8893841 1.0317884 697.08645 166s 1300 2.0067166 -4.6588703 -2.6387448 -0.19855863 763.72651 166s 1400 2.1020191 -4.2786372 -2.1756186 0.5410189 815.37712 166s 1500 1.805494 -4.1713612 -2.3732785 0.88817983 855.41486 166s 1600 2.1414975 -3.9792878 -1.8690882 0.79530679 899.00645 166s 1700 1.9971755 -3.8166601 -1.8380659 0.41343092 945.60821 166s 1800 2.0033499 -3.7524192 -1.7481879 0.76104975 973.71402 166s 1900 2.0083456 -3.7603247 -1.7442111 0.74095064 988.03964 166s 2000 1.952518 -3.6531717 -1.7078819 0.50248128 989.96894 166s Loop time of 0.823703 on 1 procs for 2000 steps with 400 atoms 166s 166s Performance: 419568.871 tau/day, 2428.061 timesteps/s, 971.224 katom-step/s 166s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads 166s 166s MPI task timing breakdown: 166s Section | min time | avg time | max time |%varavg| %total 166s --------------------------------------------------------------- 166s Pair | 0.55842 | 0.55842 | 0.55842 | 0.0 | 67.79 167s Neigh | 0.025128 | 0.025128 | 0.025128 | 0.0 | 3.05 167s Comm | 0.010466 | 0.010466 | 0.010466 | 0.0 | 1.27 167s Output | 0.021017 | 0.021017 | 0.021017 | 0.0 | 2.55 167s Modify | 0.20344 | 0.20344 | 0.20344 | 0.0 | 24.70 167s Other | | 0.005228 | | | 0.63 167s 167s Nlocal: 400 ave 400 max 400 min 167s Histogram: 1 0 0 0 0 0 0 0 0 0 167s Nghost: 276 ave 276 max 276 min 167s Histogram: 1 0 0 0 0 0 0 0 0 0 167s Neighs: 3122 ave 3122 max 3122 min 167s Histogram: 1 0 0 0 0 0 0 0 0 0 167s 167s Total # of neighbors = 3122 167s Ave neighs/atom = 7.805 167s Neighbor list builds = 346 167s Dangerous builds = 0 167s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 167s Setting up Verlet run ... 167s Unit style : lj 167s Current step : 2000 167s Time step : 0.002 167s Per MPI rank memory allocation (min/avg/max) = 6.926 | 6.926 | 6.926 Mbytes 167s Step c_rot E_pair TotEng Press Volume 167s 2000 1.952518 -3.6531717 -1.7078819 0.50248128 989.96894 167s 2100 1.9040485 -3.6005672 -1.6802923 0.39862438 989.96894 167s 2200 1.8951971 -3.5921566 -1.6947174 1.0260215 989.96894 167s 2300 2.0029244 -3.7081934 -1.6838652 0.66970135 989.96894 167s 2400 2.0271885 -3.731422 -1.7100022 0.89700608 989.96894 167s 2500 2.066122 -3.7753468 -1.7024127 0.57671483 989.96894 167s 2600 2.0610701 -3.7707871 -1.7111979 0.90915268 989.96894 167s 2700 2.0505226 -3.7599192 -1.7337496 0.65661546 989.96894 167s 2800 2.1106391 -3.8219307 -1.7370733 0.55280503 989.96894 167s 2900 2.0347598 -3.7428025 -1.7135189 0.69781833 989.96894 167s 3000 2.0330208 -3.7396616 -1.7515118 0.052338568 989.96894 167s 3100 1.9979524 -3.7070895 -1.715955 0.75689837 989.96894 167s 3200 2.1279004 -3.8431144 -1.7172074 1.0681978 989.96894 167s 3300 2.0795122 -3.7933999 -1.6843677 1.160141 989.96894 167s 3400 2.1458506 -3.8618217 -1.7011471 0.60302387 989.96894 167s 3500 2.0922186 -3.8066733 -1.7042032 1.020929 989.96894 167s 3600 2.0923687 -3.8049721 -1.7151823 0.97720853 989.96894 167s 3700 2.1082732 -3.8201734 -1.6945215 0.97495003 989.96894 167s 3800 2.0883146 -3.8011237 -1.6897726 0.59373082 989.96894 167s 3900 2.1821449 -3.8971145 -1.6976484 0.53241288 989.96894 167s 4000 2.103916 -3.8154046 -1.6865256 0.96939819 989.96894 167s Loop time of 0.93386 on 1 procs for 2000 steps with 400 atoms 167s 167s Performance: 370076.815 tau/day, 2141.648 timesteps/s, 856.659 katom-step/s 167s 99.5% CPU use with 1 MPI tasks x 1 OpenMP threads 167s 167s MPI task timing breakdown: 167s Section | min time | avg time | max time |%varavg| %total 167s --------------------------------------------------------------- 167s Pair | 0.72976 | 0.72976 | 0.72976 | 0.0 | 78.14 167s Neigh | 0.0078291 | 0.0078291 | 0.0078291 | 0.0 | 0.84 167s Comm | 0.01109 | 0.01109 | 0.01109 | 0.0 | 1.19 167s Output | 0.020746 | 0.020746 | 0.020746 | 0.0 | 2.22 167s Modify | 0.16025 | 0.16025 | 0.16025 | 0.0 | 17.16 167s Other | | 0.004184 | | | 0.45 167s 167s Nlocal: 400 ave 400 max 400 min 167s Histogram: 1 0 0 0 0 0 0 0 0 0 167s Nghost: 284 ave 284 max 284 min 167s Histogram: 1 0 0 0 0 0 0 0 0 0 167s Neighs: 3287 ave 3287 max 3287 min 167s Histogram: 1 0 0 0 0 0 0 0 0 0 167s 167s Total # of neighbors = 3287 167s Ave neighs/atom = 8.2175 167s Neighbor list builds = 51 167s Dangerous builds = 0 167s Total wall time: 0:00:01 167s LAMMPS (7 Feb 2024 - Update 1) 167s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 167s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 167s using 1 OpenMP thread(s) per MPI task 167s Lattice spacing in x,y,z = 7.0710678 7.0710678 7.0710678 167s Created orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 167s 2 by 1 by 1 MPI processor grid 167s Created 400 atoms 167s using lattice units in orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 167s create_atoms CPU = 0.000 seconds 167s Setting atom values ... 167s 29 settings made for type/fraction 167s Setting atom values ... 167s 371 settings made for mass 167s Setting atom values ... 167s 29 settings made for mass 167s Setting atom values ... 167s 371 settings made for shape 167s Setting atom values ... 167s 29 settings made for shape 167s Setting atom values ... 167s 400 settings made for quat/random 167s 371 atoms in group spheroid 167s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 167s Neighbor list info ... 167s update: every = 1 steps, delay = 0 steps, check = yes 167s max neighbors/atom: 2000, page size: 100000 167s master list distance cutoff = 4.8 167s ghost atom cutoff = 4.8 167s binsize = 2.4, bins = 59 59 3 167s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 167s (1) pair resquared, perpetual 167s attributes: half, newton on 167s pair build: half/bin/atomonly/newton 167s stencil: half/bin/2d 167s bin: standard 167s Setting up Verlet run ... 167s Unit style : lj 167s Current step : 0 167s Time step : 0.002 167s Per MPI rank memory allocation (min/avg/max) = 4.744 | 4.744 | 4.744 Mbytes 167s Step c_rot E_pair TotEng Press Volume 167s 0 2.3158404 0 2.394 0.04788 20000 167s 100 1.7101139 0 1.7678302 0.034413192 20548.286 167s 200 2.3115592 0 2.3895743 0.04649702 20556.796 167s 300 1.831333 0 1.8931405 0.041256922 18354.646 167s 400 2.1837684 -8.9738883e-06 2.2574616 0.066522186 13574.035 167s 500 1.9709471 0.0022832653 2.017568 0.098398099 8395.6884 167s 600 2.1312025 0.15575534 2.2465639 0.43878461 4664.4094 167s 700 1.9768729 0.20704026 2.1544534 0.85727857 2661.7782 167s 800 1.8049358 0.20410493 1.965827 1.2647972 1769.9195 167s 900 1.8115555 0.2163004 1.9984639 1.6554526 1443.3838 167s 1000 1.9171641 0.2328859 2.1621182 1.7795638 1436.7766 167s 1100 1.9523886 0.09158383 2.0589755 0.91188602 1668.1861 167s 1200 2.0844678 0.062228051 2.0997798 0.63282414 2088.0586 167s 1300 1.9225253 0.052820284 1.9484124 0.44379326 2643.4175 167s 1400 2.1265088 0.033305088 2.1345672 0.34979266 3172.6223 167s 1500 1.9551661 0.053995306 2.0077177 0.34810901 3444.8372 167s 1600 2.15222 0.057084004 2.1910214 0.39212275 3290.66 167s 1700 2.0126393 0.092807299 2.0739086 0.53567035 2812.2166 167s 1800 2.1109716 0.18678852 2.2572287 1.0092292 2267.5536 168s 1900 1.9107655 0.26801333 2.1635401 1.5374301 1862.3897 168s 2000 1.9034522 0.24431156 2.1576939 1.5998792 1639.6982 168s Loop time of 0.729729 on 2 procs for 2000 steps with 400 atoms 168s 168s Performance: 473600.571 tau/day, 2740.744 timesteps/s, 1.096 Matom-step/s 168s 99.3% CPU use with 2 MPI tasks x 1 OpenMP threads 168s 168s MPI task timing breakdown: 168s Section | min time | avg time | max time |%varavg| %total 168s --------------------------------------------------------------- 168s Pair | 0.51479 | 0.53129 | 0.54779 | 2.3 | 72.81 168s Neigh | 0.013587 | 0.013594 | 0.013602 | 0.0 | 1.86 168s Comm | 0.030947 | 0.047653 | 0.06436 | 7.7 | 6.53 168s Output | 0.014504 | 0.014625 | 0.014746 | 0.1 | 2.00 168s Modify | 0.11422 | 0.11427 | 0.11432 | 0.0 | 15.66 168s Other | | 0.008294 | | | 1.14 168s 168s Nlocal: 200 ave 210 max 190 min 168s Histogram: 1 0 0 0 0 0 0 0 0 1 168s Nghost: 164 ave 168 max 160 min 168s Histogram: 1 0 0 0 0 0 0 0 0 1 168s Neighs: 910 ave 958 max 862 min 168s Histogram: 1 0 0 0 0 0 0 0 0 1 168s 168s Total # of neighbors = 1820 168s Ave neighs/atom = 4.55 168s Neighbor list builds = 420 168s Dangerous builds = 0 168s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 168s Setting up Verlet run ... 168s Unit style : lj 168s Current step : 2000 168s Time step : 0.002 168s Per MPI rank memory allocation (min/avg/max) = 6.89 | 6.89 | 6.89 Mbytes 168s Step c_rot E_pair TotEng Press Volume 168s 2000 1.9034522 0.24431156 2.1576939 1.5998792 1639.6982 168s 2100 1.9990056 0.14555548 2.132148 1.1813518 1639.6982 168s 2200 1.9913934 0.15343329 2.1279388 1.2079524 1639.6982 168s 2300 1.9931915 0.15156716 2.1646511 1.1963228 1639.6982 168s 2400 1.9969018 0.14779678 2.1413044 1.1999441 1639.6982 168s 2500 1.9401284 0.20640998 2.168038 1.4643778 1639.6982 168s 2600 1.9492999 0.19710633 2.136292 1.3812079 1639.6982 168s 2700 2.0106221 0.13364602 2.1384766 1.1322764 1639.6982 168s 2800 1.9890373 0.15589592 2.1204126 1.2343376 1639.6982 168s 2900 1.9922852 0.15256973 2.0956529 1.2419164 1639.6982 168s 3000 1.9618081 0.18405956 2.1392907 1.3468024 1639.6982 168s 3100 1.9208151 0.22640747 2.1223512 1.6487869 1639.6982 168s 3200 1.9201455 0.22718159 2.1360379 1.5370084 1639.6982 168s 3300 2.0073209 0.13690664 2.1185856 1.1973804 1639.6982 168s 3400 2.0179675 0.12601929 2.1227814 1.0847662 1639.6982 168s 3500 1.9561043 0.1899159 2.1150396 1.3377581 1639.6982 169s 3600 1.9971211 0.14756291 2.1401443 1.2026452 1639.6982 169s 3700 1.9731975 0.1722809 2.1472994 1.273035 1639.6982 169s 3800 2.0000957 0.14444342 2.0994612 1.1502386 1639.6982 169s 3900 1.991142 0.15372442 2.1423563 1.2279655 1639.6982 169s 4000 1.9822345 0.16298723 2.0899438 1.2166747 1639.6982 169s Loop time of 1.16181 on 2 procs for 2000 steps with 400 atoms 169s 169s Performance: 297467.105 tau/day, 1721.453 timesteps/s, 688.581 katom-step/s 169s 99.3% CPU use with 2 MPI tasks x 1 OpenMP threads 169s 169s MPI task timing breakdown: 169s Section | min time | avg time | max time |%varavg| %total 169s --------------------------------------------------------------- 169s Pair | 0.93771 | 0.98052 | 1.0233 | 4.3 | 84.40 169s Neigh | 0.0026455 | 0.0028031 | 0.0029608 | 0.3 | 0.24 169s Comm | 0.032276 | 0.075077 | 0.11788 | 15.6 | 6.46 169s Output | 0.016038 | 0.01616 | 0.016283 | 0.1 | 1.39 169s Modify | 0.07257 | 0.07702 | 0.08147 | 1.6 | 6.63 169s Other | | 0.01023 | | | 0.88 169s 169s Nlocal: 200 ave 212 max 188 min 169s Histogram: 1 0 0 0 0 0 0 0 0 1 169s Nghost: 171.5 ave 173 max 170 min 169s Histogram: 1 0 0 0 0 0 0 0 0 1 169s Neighs: 880.5 ave 946 max 815 min 169s Histogram: 1 0 0 0 0 0 0 0 0 1 169s 169s Total # of neighbors = 1761 169s Ave neighs/atom = 4.4025 169s Neighbor list builds = 49 169s Dangerous builds = 0 169s Total wall time: 0:00:01 169s LAMMPS (7 Feb 2024 - Update 1) 170s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 170s using 1 OpenMP thread(s) per MPI task 170s Lattice spacing in x,y,z = 7.0710678 7.0710678 7.0710678 170s Created orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 170s 1 by 1 by 1 MPI processor grid 170s Created 400 atoms 170s using lattice units in orthogonal box = (0 0 -3.5355339) to (141.42136 141.42136 3.5355339) 170s create_atoms CPU = 0.000 seconds 170s Setting atom values ... 170s 29 settings made for type/fraction 170s Setting atom values ... 170s 371 settings made for mass 170s Setting atom values ... 170s 29 settings made for mass 170s Setting atom values ... 170s 371 settings made for shape 170s Setting atom values ... 170s 29 settings made for shape 170s Setting atom values ... 170s 400 settings made for quat/random 170s 371 atoms in group spheroid 170s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 170s Neighbor list info ... 170s update: every = 1 steps, delay = 0 steps, check = yes 170s max neighbors/atom: 2000, page size: 100000 170s master list distance cutoff = 4.8 170s ghost atom cutoff = 4.8 170s binsize = 2.4, bins = 59 59 3 170s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 170s (1) pair resquared, perpetual 170s attributes: half, newton on 170s pair build: half/bin/atomonly/newton 170s stencil: half/bin/2d 170s bin: standard 170s Setting up Verlet run ... 170s Unit style : lj 170s Current step : 0 170s Time step : 0.002 170s Per MPI rank memory allocation (min/avg/max) = 4.753 | 4.753 | 4.753 Mbytes 170s Step c_rot E_pair TotEng Press Volume 170s 0 2.3158404 0 2.394 0.04788 20000 170s 100 1.7101139 0 1.7678302 0.034413192 20548.286 170s 200 2.3115592 0 2.3895743 0.04649702 20556.796 170s 300 1.831333 0 1.8931405 0.041256922 18354.646 170s 400 2.1837684 -8.9738883e-06 2.2574616 0.066522186 13574.035 170s 500 1.9709471 0.0022832653 2.017568 0.098398099 8395.6884 170s 600 2.1312025 0.15575534 2.2465639 0.43878461 4664.4094 170s 700 1.9768729 0.20704026 2.1544534 0.85727857 2661.7782 170s 800 1.8049358 0.20410493 1.965827 1.2647972 1769.9195 170s 900 1.8115555 0.2163004 1.9984639 1.6554526 1443.3838 170s 1000 1.9171641 0.2328859 2.1621182 1.7795638 1436.7766 170s 1100 1.9523886 0.09158383 2.0589755 0.91188602 1668.1861 170s 1200 2.0844678 0.062228051 2.0997798 0.63282414 2088.0586 170s 1300 1.9225253 0.052820284 1.9484124 0.44379326 2643.4175 170s 1400 2.1265088 0.033305088 2.1345672 0.34979266 3172.6223 170s 1500 1.9551661 0.053995306 2.0077177 0.34810901 3444.8372 170s 1600 2.15222 0.057084004 2.1910214 0.39212275 3290.66 170s 1700 2.0126393 0.092807299 2.0739086 0.53567035 2812.2166 170s 1800 2.1109716 0.18678852 2.2572287 1.0092292 2267.5536 170s 1900 1.9107655 0.26801333 2.1635401 1.5374301 1862.3897 170s 2000 1.9034522 0.24431156 2.1576939 1.5998792 1639.6982 170s Loop time of 1.34416 on 1 procs for 2000 steps with 400 atoms 170s 170s Performance: 257113.079 tau/day, 1487.923 timesteps/s, 595.169 katom-step/s 170s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads 170s 170s MPI task timing breakdown: 170s Section | min time | avg time | max time |%varavg| %total 170s --------------------------------------------------------------- 170s Pair | 1.0773 | 1.0773 | 1.0773 | 0.0 | 80.15 170s Neigh | 0.027404 | 0.027404 | 0.027404 | 0.0 | 2.04 170s Comm | 0.0088706 | 0.0088706 | 0.0088706 | 0.0 | 0.66 170s Output | 0.021008 | 0.021008 | 0.021008 | 0.0 | 1.56 170s Modify | 0.20362 | 0.20362 | 0.20362 | 0.0 | 15.15 172s Other | | 0.005953 | | | 0.44 172s 172s Nlocal: 400 ave 400 max 400 min 172s Histogram: 1 0 0 0 0 0 0 0 0 0 172s Nghost: 206 ave 206 max 206 min 172s Histogram: 1 0 0 0 0 0 0 0 0 0 172s Neighs: 1820 ave 1820 max 1820 min 172s Histogram: 1 0 0 0 0 0 0 0 0 0 172s 172s Total # of neighbors = 1820 172s Ave neighs/atom = 4.55 172s Neighbor list builds = 420 172s Dangerous builds = 0 172s Generated 0 of 1 mixed pair_coeff terms from geometric mixing rule 172s Setting up Verlet run ... 172s Unit style : lj 172s Current step : 2000 172s Time step : 0.002 172s Per MPI rank memory allocation (min/avg/max) = 6.917 | 6.917 | 6.917 Mbytes 172s Step c_rot E_pair TotEng Press Volume 172s 2000 1.9034522 0.24431156 2.1576939 1.5998792 1639.6982 172s 2100 1.9990056 0.14555548 2.132148 1.1813518 1639.6982 172s 2200 1.9913934 0.15343329 2.1279388 1.2079524 1639.6982 172s 2300 1.9931915 0.15156716 2.1646511 1.1963228 1639.6982 172s 2400 1.9969018 0.14779678 2.1413044 1.1999441 1639.6982 172s 2500 1.9401284 0.20640998 2.168038 1.4643778 1639.6982 172s 2600 1.9492999 0.19710633 2.136292 1.3812079 1639.6982 172s 2700 2.0106221 0.13364602 2.1384766 1.1322764 1639.6982 172s 2800 1.9890373 0.15589593 2.1204126 1.2343376 1639.6982 172s 2900 1.9922852 0.15256971 2.0956529 1.2419163 1639.6982 172s 3000 1.9618081 0.18405957 2.1392907 1.3468024 1639.6982 172s 3100 1.9208147 0.22640784 2.1223514 1.6487895 1639.6982 172s 3200 1.9201455 0.22718159 2.136038 1.5370082 1639.6982 172s 3300 2.0073197 0.13690789 2.1185866 1.1973909 1639.6982 172s 3400 2.0179674 0.12601942 2.1227814 1.0847669 1639.6982 172s 3500 1.956106 0.18991407 2.1150383 1.3377503 1639.6982 172s 3600 1.9971218 0.14756218 2.1401435 1.2026397 1639.6982 172s 3700 1.9731868 0.17229187 2.1473293 1.2730831 1639.6982 172s 3800 2.0000991 0.14444 2.0994814 1.1502366 1639.6982 172s 3900 1.9911437 0.15372267 2.1424048 1.227979 1639.6982 172s 4000 1.9823364 0.16288201 2.0899584 1.2162698 1639.6982 172s Loop time of 2.13266 on 1 procs for 2000 steps with 400 atoms 172s 172s Performance: 162051.221 tau/day, 937.796 timesteps/s, 375.119 katom-step/s 172s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads 172s 172s MPI task timing breakdown: 172s Section | min time | avg time | max time |%varavg| %total 172s --------------------------------------------------------------- 172s Pair | 1.9367 | 1.9367 | 1.9367 | 0.0 | 90.81 172s Neigh | 0.0054623 | 0.0054623 | 0.0054623 | 0.0 | 0.26 172s Comm | 0.0083731 | 0.0083731 | 0.0083731 | 0.0 | 0.39 172s Output | 0.02067 | 0.02067 | 0.02067 | 0.0 | 0.97 172s Modify | 0.15722 | 0.15722 | 0.15722 | 0.0 | 7.37 172s Other | | 0.004183 | | | 0.20 172s 172s Nlocal: 400 ave 400 max 400 min 172s Histogram: 1 0 0 0 0 0 0 0 0 0 172s Nghost: 215 ave 215 max 215 min 172s Histogram: 1 0 0 0 0 0 0 0 0 0 172s Neighs: 1761 ave 1761 max 1761 min 172s Histogram: 1 0 0 0 0 0 0 0 0 0 172s 172s Total # of neighbors = 1761 172s Ave neighs/atom = 4.4025 172s Neighbor list builds = 49 172s Dangerous builds = 0 172s Total wall time: 0:00:03 172s run: OK 173s autopkgtest [08:54:59]: test ellipse: -----------------------] 173s ellipse PASS 173s autopkgtest [08:54:59]: test ellipse: - - - - - - - - - - results - - - - - - - - - - 174s autopkgtest [08:55:00]: test flow: preparing testbed 174s Reading package lists... 174s Building dependency tree... 174s Reading state information... 174s Starting pkgProblemResolver with broken count: 0 174s Starting 2 pkgProblemResolver with broken count: 0 174s Done 175s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 175s autopkgtest [08:55:01]: test flow: [----------------------- 176s LAMMPS (7 Feb 2024 - Update 1) 176s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 176s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 176s using 1 OpenMP thread(s) per MPI task 176s Lattice spacing in x,y,z = 1.2843567 2.2245711 1.2843567 176s Created orthogonal box = (0 0 -0.32108918) to (25.687135 22.245711 0.32108918) 176s 2 by 1 by 1 MPI processor grid 176s Created 420 atoms 176s using lattice units in orthogonal box = (0 -0.0022245711 -0.32108918) to (25.687135 22.247936 0.32108918) 176s create_atoms CPU = 0.001 seconds 176s 60 atoms in group lower 176s 60 atoms in group upper 176s 120 atoms in group boundary 176s 300 atoms in group flow 176s Setting atom values ... 176s 60 settings made for type 176s Setting atom values ... 176s 60 settings made for type 176s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 176s Generated 0 of 3 mixed pair_coeff terms from geometric mixing rule 176s Neighbor list info ... 176s update: every = 1 steps, delay = 5 steps, check = yes 176s max neighbors/atom: 2000, page size: 100000 176s master list distance cutoff = 1.42246 176s ghost atom cutoff = 1.42246 176s binsize = 0.71123, bins = 37 32 1 176s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 176s (1) pair lj/cut, perpetual 176s attributes: half, newton on 176s pair build: half/bin/atomonly/newton 176s stencil: half/bin/2d 176s bin: standard 176s Setting up Verlet run ... 176s Unit style : lj 176s Current step : 0 176s Time step : 0.003 176s Per MPI rank memory allocation (min/avg/max) = 3.044 | 3.044 | 3.044 Mbytes 176s Step Temp E_pair E_mol TotEng Press Volume 176s 0 1 0 0 0.71190476 0.52314537 571.54286 176s 500 1.0951876 -0.33403931 0 0.44562996 3.2502319 571.54286 176s 1000 1 -0.3731019 0 0.33880286 2.8561715 571.54286 176s 1500 1.0366879 -0.36031105 0 0.37771198 3.0196355 571.54286 176s 2000 1 -0.41053025 0 0.30137451 2.8651905 571.54286 176s 2500 1.1226126 -0.37018872 0 0.42900451 2.9459225 571.54286 176s 3000 1 -0.40149829 0 0.31040647 2.7056256 571.54286 176s 3500 1.071429 -0.46774125 0 0.29501417 2.5582838 571.54286 176s 4000 1 -0.39054248 0 0.32136228 2.4314528 571.54286 176s 4500 1.029458 -0.40311018 0 0.32976584 2.5012442 571.54286 176s 5000 1 -0.44252019 0 0.26938457 2.3566317 571.54286 176s 5500 1.0715559 -0.4771158 0 0.28572997 2.420979 571.54286 176s 6000 1 -0.42490153 0 0.28700323 2.4032097 571.54286 176s 6500 1.1729217 -0.43515146 0 0.39985708 2.3670704 571.54286 176s 7000 1 -0.4539943 0 0.25791046 2.36148 571.54286 176s 7500 1.1676524 -0.40784405 0 0.42341328 2.699336 571.54286 176s 8000 1 -0.37626352 0 0.33564124 2.8174026 571.54286 176s 8500 1.1583539 -0.41258281 0 0.41205487 2.6617634 571.54286 176s 9000 1 -0.42918407 0 0.28272069 2.3090418 571.54286 176s 9500 1.0432103 -0.39042315 0 0.3522432 2.6910698 571.54286 176s 10000 1 -0.4676995 0 0.24420526 2.3898708 571.54286 176s Loop time of 0.257366 on 2 procs for 10000 steps with 420 atoms 176s 176s Performance: 10071261.793 tau/day, 38855.177 timesteps/s, 16.319 Matom-step/s 176s 96.5% CPU use with 2 MPI tasks x 1 OpenMP threads 176s 176s MPI task timing breakdown: 176s Section | min time | avg time | max time |%varavg| %total 176s --------------------------------------------------------------- 176s Pair | 0.058646 | 0.066425 | 0.074204 | 3.0 | 25.81 176s Neigh | 0.024563 | 0.028899 | 0.033234 | 2.6 | 11.23 176s Comm | 0.071234 | 0.088118 | 0.105 | 5.7 | 34.24 176s Output | 0.00039251 | 0.0025528 | 0.004713 | 4.3 | 0.99 176s Modify | 0.032325 | 0.039913 | 0.047501 | 3.8 | 15.51 176s Other | | 0.03146 | | | 12.22 176s 176s Nlocal: 210 ave 214 max 206 min 176s Histogram: 1 0 0 0 0 0 0 0 0 1 176s Nghost: 51 ave 52 max 50 min 176s Histogram: 1 0 0 0 0 0 0 0 0 1 176s Neighs: 472 ave 494 max 450 min 176s Histogram: 1 0 0 0 0 0 0 0 0 1 176s 176s Total # of neighbors = 944 176s Ave neighs/atom = 2.247619 176s Neighbor list builds = 994 176s Dangerous builds = 0 176s Total wall time: 0:00:00 176s LAMMPS (7 Feb 2024 - Update 1) 176s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 176s using 1 OpenMP thread(s) per MPI task 176s Lattice spacing in x,y,z = 1.2843567 2.2245711 1.2843567 176s Created orthogonal box = (0 0 -0.32108918) to (25.687135 22.245711 0.32108918) 176s 1 by 1 by 1 MPI processor grid 176s Created 420 atoms 176s using lattice units in orthogonal box = (0 -0.0022245711 -0.32108918) to (25.687135 22.247936 0.32108918) 176s create_atoms CPU = 0.000 seconds 176s 60 atoms in group lower 176s 60 atoms in group upper 176s 120 atoms in group boundary 176s 300 atoms in group flow 176s Setting atom values ... 176s 60 settings made for type 176s Setting atom values ... 176s 60 settings made for type 176s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 176s Generated 0 of 3 mixed pair_coeff terms from geometric mixing rule 176s Neighbor list info ... 176s update: every = 1 steps, delay = 5 steps, check = yes 176s max neighbors/atom: 2000, page size: 100000 176s master list distance cutoff = 1.42246 176s ghost atom cutoff = 1.42246 176s binsize = 0.71123, bins = 37 32 1 176s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 176s (1) pair lj/cut, perpetual 176s attributes: half, newton on 176s pair build: half/bin/atomonly/newton 176s stencil: half/bin/2d 176s bin: standard 176s Setting up Verlet run ... 176s Unit style : lj 176s Current step : 0 176s Time step : 0.003 176s Per MPI rank memory allocation (min/avg/max) = 3.048 | 3.048 | 3.048 Mbytes 176s Step Temp E_pair E_mol TotEng Press Volume 176s 0 1 0 0 0.71190476 0.52314537 571.54286 176s 500 1.0644427 -0.31382888 0 0.44395296 3.0013076 571.54286 176s 1000 1 -0.42965445 0 0.28225032 2.9612165 571.54286 176s 1500 1.0739874 -0.41189772 0 0.35267901 2.5621951 571.54286 176s 2000 1 -0.40814262 0 0.30376214 2.9229597 571.54286 176s 2500 1.193035 -0.38493995 0 0.46438736 2.8340607 571.54286 176s 3000 1 -0.45564537 0 0.2562594 2.7506498 571.54286 176s 3500 1.0626882 -0.45013361 0 0.30639918 2.5530157 571.54286 176s 4000 1 -0.39613722 0 0.31576755 2.4669827 571.54286 176s 4500 1.0832856 -0.43003699 0 0.34115919 2.2569491 571.54286 176s 5000 1 -0.42733451 0 0.28457025 2.4685826 571.54286 176s 5500 1.0413391 -0.39346589 0 0.34786835 2.6348761 571.54286 176s 6000 1 -0.42845926 0 0.2834455 2.4988125 571.54286 176s 6500 1.0890296 -0.43775517 0 0.33753016 2.4384217 571.54286 176s 7000 1 -0.46023483 0 0.25166993 2.4429964 571.54286 176s 7500 1.0644341 -0.45175861 0 0.3060171 2.4324515 571.54286 176s 8000 1 -0.43920605 0 0.27269871 2.6469713 571.54286 176s 8500 1.0647184 -0.45399641 0 0.3039817 2.5748114 571.54286 176s 9000 1 -0.46453995 0 0.24736482 2.6591355 571.54286 176s 9500 1.0123 -0.44029216 0 0.28036906 2.413597 571.54286 176s 10000 1 -0.43826448 0 0.27364028 2.3699706 571.54286 176s Loop time of 0.261513 on 1 procs for 10000 steps with 420 atoms 176s 176s Performance: 9911542.542 tau/day, 38238.976 timesteps/s, 16.060 Matom-step/s 176s 99.6% CPU use with 1 MPI tasks x 1 OpenMP threads 176s 176s MPI task timing breakdown: 176s Section | min time | avg time | max time |%varavg| %total 176s --------------------------------------------------------------- 176s Pair | 0.12144 | 0.12144 | 0.12144 | 0.0 | 46.44 176s Neigh | 0.04906 | 0.04906 | 0.04906 | 0.0 | 18.76 176s Comm | 0.0082501 | 0.0082501 | 0.0082501 | 0.0 | 3.15 176s Output | 0.00036403 | 0.00036403 | 0.00036403 | 0.0 | 0.14 176s Modify | 0.064938 | 0.064938 | 0.064938 | 0.0 | 24.83 176s Other | | 0.01746 | | | 6.68 176s 176s Nlocal: 420 ave 420 max 420 min 176s Histogram: 1 0 0 0 0 0 0 0 0 0 176s Nghost: 50 ave 50 max 50 min 176s Histogram: 1 0 0 0 0 0 0 0 0 0 176s Neighs: 946 ave 946 max 946 min 176s Histogram: 1 0 0 0 0 0 0 0 0 0 176s 176s Total # of neighbors = 946 176s Ave neighs/atom = 2.252381 176s Neighbor list builds = 979 176s Dangerous builds = 0 176s Total wall time: 0:00:00 176s LAMMPS (7 Feb 2024 - Update 1) 176s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 176s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 176s using 1 OpenMP thread(s) per MPI task 176s Lattice spacing in x,y,z = 1.2843567 2.2245711 1.2843567 176s Created orthogonal box = (0 0 -0.32108918) to (25.687135 22.245711 0.32108918) 176s 2 by 1 by 1 MPI processor grid 176s Created 420 atoms 176s using lattice units in orthogonal box = (0 -0.0022245711 -0.32108918) to (25.687135 22.247936 0.32108918) 176s create_atoms CPU = 0.000 seconds 176s 60 atoms in group lower 176s 60 atoms in group upper 176s 120 atoms in group boundary 176s 300 atoms in group flow 176s Setting atom values ... 176s 60 settings made for type 176s Setting atom values ... 176s 60 settings made for type 176s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 176s Generated 0 of 3 mixed pair_coeff terms from geometric mixing rule 176s Neighbor list info ... 176s update: every = 1 steps, delay = 5 steps, check = yes 176s max neighbors/atom: 2000, page size: 100000 176s master list distance cutoff = 1.42246 176s ghost atom cutoff = 1.42246 176s binsize = 0.71123, bins = 37 32 1 176s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 176s (1) pair lj/cut, perpetual 176s attributes: half, newton on 176s pair build: half/bin/atomonly/newton 176s stencil: half/bin/2d 176s bin: standard 176s Setting up Verlet run ... 176s Unit style : lj 176s Current step : 0 176s Time step : 0.003 176s Per MPI rank memory allocation (min/avg/max) = 3.044 | 3.044 | 3.044 Mbytes 176s Step Temp E_pair E_mol TotEng Press Volume 176s 0 1 0 0 0.71190476 0.52314537 571.54286 176s 500 1.0758737 -0.36090417 0 0.40501541 2.7822308 575.0659 176s 1000 1 -0.35701441 0 0.35489035 2.0575313 585.71407 176s 1500 1.2368663 -0.37709732 0 0.50343367 1.4865879 587.193 176s 2000 1 -0.39362939 0 0.31827537 1.4236 578.9418 176s 2500 1.2272957 -0.42381901 0 0.44989865 1.4544608 570.15856 176s 3000 1 -0.4914342 0 0.22047056 1.534595 554.98633 176s 3500 1.2444794 -0.59760758 0 0.2883432 1.8754993 537.01599 176s 4000 1 -0.69890444 0 0.013000318 2.1406234 521.49815 177s 4500 1.2188346 -0.74991278 0 0.1177814 2.7508733 507.73977 177s 5000 1 -0.7445329 0 -0.032628135 3.1054873 501.68859 177s 5500 1.1836415 -0.76775125 0 0.074888789 2.6990153 506.01181 177s 6000 1 -0.7575268 0 -0.04562204 2.4858442 508.26846 177s 6500 1.2076032 -0.68884147 0 0.17085699 2.3143206 512.291 177s 7000 1 -0.66241571 0 0.049489051 2.0686009 516.38744 177s 7500 1.2123711 -0.71994819 0 0.14314459 2.1753937 513.88371 177s 8000 1 -0.71001477 0 0.0018899921 2.0630419 509.80458 177s 8500 1.1991563 -0.78355267 0 0.070132412 2.493712 504.22835 177s 9000 1 -0.72719051 0 -0.015285749 2.27793 505.75742 177s 9500 1.2073739 -0.76518329 0 0.094351911 2.5653732 503.29071 177s 10000 1 -0.78638614 0 -0.074481378 2.3564468 504.38491 177s Loop time of 0.283888 on 2 procs for 10000 steps with 420 atoms 177s 177s Performance: 9130365.901 tau/day, 35225.177 timesteps/s, 14.795 Matom-step/s 177s 99.1% CPU use with 2 MPI tasks x 1 OpenMP threads 177s 177s MPI task timing breakdown: 177s Section | min time | avg time | max time |%varavg| %total 177s --------------------------------------------------------------- 177s Pair | 0.067376 | 0.071421 | 0.075466 | 1.5 | 25.16 177s Neigh | 0.015444 | 0.016709 | 0.017975 | 1.0 | 5.89 177s Comm | 0.071122 | 0.077846 | 0.08457 | 2.4 | 27.42 177s Output | 0.00037678 | 0.0010915 | 0.0018063 | 2.2 | 0.38 177s Modify | 0.078572 | 0.084743 | 0.090914 | 2.1 | 29.85 177s Other | | 0.03208 | | | 11.30 177s 177s Nlocal: 210 ave 211 max 209 min 177s Histogram: 1 0 0 0 0 0 0 0 0 1 177s Nghost: 50 ave 51 max 49 min 177s Histogram: 1 0 0 0 0 0 0 0 0 1 177s Neighs: 563.5 ave 569 max 558 min 177s Histogram: 1 0 0 0 0 0 0 0 0 1 177s 177s Total # of neighbors = 1127 177s Ave neighs/atom = 2.6833333 177s Neighbor list builds = 560 177s Dangerous builds = 0 177s Total wall time: 0:00:00 177s LAMMPS (7 Feb 2024 - Update 1) 177s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 177s using 1 OpenMP thread(s) per MPI task 177s Lattice spacing in x,y,z = 1.2843567 2.2245711 1.2843567 177s Created orthogonal box = (0 0 -0.32108918) to (25.687135 22.245711 0.32108918) 177s 1 by 1 by 1 MPI processor grid 177s Created 420 atoms 177s using lattice units in orthogonal box = (0 -0.0022245711 -0.32108918) to (25.687135 22.247936 0.32108918) 177s create_atoms CPU = 0.000 seconds 177s 60 atoms in group lower 177s 60 atoms in group upper 177s 120 atoms in group boundary 177s 300 atoms in group flow 177s Setting atom values ... 177s 60 settings made for type 177s Setting atom values ... 177s 60 settings made for type 177s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 177s Generated 0 of 3 mixed pair_coeff terms from geometric mixing rule 177s Neighbor list info ... 177s update: every = 1 steps, delay = 5 steps, check = yes 177s max neighbors/atom: 2000, page size: 100000 177s master list distance cutoff = 1.42246 177s ghost atom cutoff = 1.42246 177s binsize = 0.71123, bins = 37 32 1 177s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 177s (1) pair lj/cut, perpetual 177s attributes: half, newton on 177s pair build: half/bin/atomonly/newton 177s stencil: half/bin/2d 177s bin: standard 177s Setting up Verlet run ... 177s Unit style : lj 177s Current step : 0 177s Time step : 0.003 177s Per MPI rank memory allocation (min/avg/max) = 3.048 | 3.048 | 3.048 Mbytes 177s Step Temp E_pair E_mol TotEng Press Volume 177s 0 1 0 0 0.71190476 0.52314537 571.54286 177s 500 1.0990751 -0.36396768 0 0.41846911 2.522517 575.55806 177s 1000 1 -0.34609791 0 0.36580685 1.9736175 584.67179 177s 1500 1.2112861 -0.39062708 0 0.47169327 1.521881 587.24778 177s 2000 1 -0.39956949 0 0.31233527 1.2496669 583.00676 177s 2500 1.2236323 -0.40128447 0 0.46982521 1.427689 570.03729 177s 3000 1 -0.48849374 0 0.22341102 1.5091345 553.64637 177s 3500 1.2404604 -0.63017693 0 0.25291274 1.7681156 535.22588 177s 4000 1 -0.71303348 0 -0.001128721 2.2083475 516.7312 177s 4500 1.2316246 -0.77421749 0 0.10258194 2.5788522 503.1817 177s 5000 1 -0.7999552 0 -0.088050433 3.1546066 498.48431 177s 5500 1.2347442 -0.74592478 0 0.13309548 2.695455 502.87799 177s 6000 1 -0.67044678 0 0.041457981 2.2074541 513.82275 177s 6500 1.2102356 -0.63751404 0 0.22405846 1.9921588 517.21223 177s 7000 1 -0.65043667 0 0.061468095 1.8816222 517.22883 177s 7500 1.2366099 -0.68011129 0 0.20023717 2.0387578 515.33777 177s 8000 1 -0.72046833 0 -0.0085635721 2.1380846 510.42066 177s 8500 1.2219154 -0.79786917 0 0.072018214 2.2824348 503.99311 177s 9000 1 -0.78517366 0 -0.073268895 2.6920699 500.15016 177s 9500 1.1934208 -0.7468438 0 0.10275813 2.4971524 501.17896 177s 10000 1 -0.67478993 0 0.037114833 2.3681765 504.37054 177s Loop time of 0.293113 on 1 procs for 10000 steps with 420 atoms 177s 177s Performance: 8843007.720 tau/day, 34116.542 timesteps/s, 14.329 Matom-step/s 177s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads 177s 177s MPI task timing breakdown: 177s Section | min time | avg time | max time |%varavg| %total 177s --------------------------------------------------------------- 177s Pair | 0.12859 | 0.12859 | 0.12859 | 0.0 | 43.87 177s Neigh | 0.027851 | 0.027851 | 0.027851 | 0.0 | 9.50 177s Comm | 0.0066848 | 0.0066848 | 0.0066848 | 0.0 | 2.28 177s Output | 0.00034809 | 0.00034809 | 0.00034809 | 0.0 | 0.12 177s Modify | 0.11258 | 0.11258 | 0.11258 | 0.0 | 38.41 177s Other | | 0.01706 | | | 5.82 177s 177s Nlocal: 420 ave 420 max 420 min 177s Histogram: 1 0 0 0 0 0 0 0 0 0 177s Nghost: 51 ave 51 max 51 min 177s Histogram: 1 0 0 0 0 0 0 0 0 0 177s Neighs: 1150 ave 1150 max 1150 min 177s Histogram: 1 0 0 0 0 0 0 0 0 0 177s 177s Total # of neighbors = 1150 177s Ave neighs/atom = 2.7380952 177s Neighbor list builds = 563 177s Dangerous builds = 0 177s Total wall time: 0:00:00 177s run: OK 177s autopkgtest [08:55:03]: test flow: -----------------------] 178s autopkgtest [08:55:04]: test flow: - - - - - - - - - - results - - - - - - - - - - 178s flow PASS 178s autopkgtest [08:55:04]: test friction: preparing testbed 178s Reading package lists... 179s Building dependency tree... 179s Reading state information... 179s Starting pkgProblemResolver with broken count: 0 179s Starting 2 pkgProblemResolver with broken count: 0 179s Done 179s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 180s autopkgtest [08:55:06]: test friction: [----------------------- 180s LAMMPS (7 Feb 2024 - Update 1) 180s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 180s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 180s using 1 OpenMP thread(s) per MPI task 180s Lattice spacing in x,y,z = 1.1326962 1.9618873 1.1326962 180s Created orthogonal box = (0 0 -0.28317404) to (56.634808 43.161521 0.28317404) 180s 2 by 1 by 1 MPI processor grid 180s Created 750 atoms 180s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 180s create_atoms CPU = 0.000 seconds 180s Created 750 atoms 180s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 180s create_atoms CPU = 0.000 seconds 180s Created 112 atoms 180s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 180s create_atoms CPU = 0.000 seconds 180s Created 112 atoms 180s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 180s create_atoms CPU = 0.000 seconds 180s 750 atoms in group lo 180s 862 atoms in group lo 180s 750 atoms in group hi 180s 862 atoms in group hi 180s 150 atoms in group lo-fixed 180s 150 atoms in group hi-fixed 180s 300 atoms in group boundary 180s 1424 atoms in group mobile 180s Setting atom values ... 180s 150 settings made for type 180s Setting atom values ... 180s 150 settings made for type 180s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 180s Generated 0 of 6 mixed pair_coeff terms from geometric mixing rule 180s Neighbor list info ... 180s update: every = 1 steps, delay = 5 steps, check = yes 180s max neighbors/atom: 2000, page size: 100000 180s master list distance cutoff = 2.8 180s ghost atom cutoff = 2.8 180s binsize = 1.4, bins = 41 31 1 180s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 180s (1) pair lj/cut, perpetual 180s attributes: half, newton on 180s pair build: half/bin/atomonly/newton 180s stencil: half/bin/2d 180s bin: standard 180s Setting up Verlet run ... 180s Unit style : lj 180s Current step : 0 180s Time step : 0.0025 180s Per MPI rank memory allocation (min/avg/max) = 3.05 | 3.05 | 3.05 Mbytes 180s Step Temp E_pair E_mol TotEng Press Volume 180s 0 0.1 -3.1333672 0 -3.0920969 -1.1437663 2444.9333 180s 1000 0.081091635 -3.0930924 0 -3.0596257 -0.030127914 2444.9333 180s 2000 0.082087761 -3.0850474 0 -3.0511696 -0.44306626 2444.9333 181s 3000 0.088948343 -3.08139 0 -3.0446807 -0.25586469 2444.9333 181s 4000 0.091186493 -3.0656845 0 -3.0280515 -0.10060397 2444.9333 181s 5000 0.10802896 -3.0566391 0 -3.0120553 -0.13618814 2444.9333 181s 6000 0.1 -3.0489246 0 -3.0076543 -0.20314788 2444.9333 181s 7000 0.11587085 -3.0413277 0 -2.9935075 -0.37543775 2444.9333 181s 8000 0.1 -3.029647 0 -2.9883767 -0.41884104 2444.9333 182s 9000 0.11588457 -3.0253422 0 -2.9775163 -0.43584065 2444.9333 182s 10000 0.1 -3.0293042 0 -2.9880339 -0.36809832 2444.9333 182s 11000 0.11830962 -3.029318 0 -2.9804913 -0.44710474 2444.9333 182s 12000 0.1 -3.0283785 0 -2.9871082 -0.20225766 2444.9333 182s 13000 0.11646107 -3.0351824 0 -2.9871185 -0.46506235 2444.9333 183s 14000 0.11264391 -3.0399048 0 -2.9934163 -0.23851225 2444.9333 183s 15000 0.11397557 -3.0400714 0 -2.9930333 -0.27494778 2444.9333 183s 16000 0.11527553 -3.0423634 0 -2.9947889 -0.27314794 2444.9333 183s 17000 0.11820003 -3.0419531 0 -2.9931715 -0.39533728 2444.9333 183s 18000 0.11165087 -3.0494285 0 -3.0033499 -0.25447692 2444.9333 183s 19000 0.11450729 -3.0488755 0 -3.0016179 -0.27183418 2444.9333 183s 20000 0.1090499 -3.0490281 0 -3.0040229 -0.39612969 2444.9333 183s Loop time of 3.37738 on 2 procs for 20000 steps with 1724 atoms 183s 183s Performance: 1279099.280 tau/day, 5921.756 timesteps/s, 10.209 Matom-step/s 183s 99.7% CPU use with 2 MPI tasks x 1 OpenMP threads 183s 183s MPI task timing breakdown: 183s Section | min time | avg time | max time |%varavg| %total 183s --------------------------------------------------------------- 183s Pair | 2.1716 | 2.3749 | 2.5782 | 13.2 | 70.32 183s Neigh | 0.15066 | 0.16673 | 0.1828 | 3.9 | 4.94 183s Comm | 0.22696 | 0.44966 | 0.67236 | 33.2 | 13.31 183s Output | 0.00053598 | 0.0010973 | 0.0016587 | 1.7 | 0.03 183s Modify | 0.23992 | 0.25928 | 0.27865 | 3.8 | 7.68 183s Other | | 0.1257 | | | 3.72 183s 183s Nlocal: 862 ave 874 max 850 min 183s Histogram: 1 0 0 0 0 0 0 0 0 1 183s Nghost: 165.5 ave 166 max 165 min 183s Histogram: 1 0 0 0 0 0 0 0 0 1 183s Neighs: 7198 ave 7283 max 7113 min 183s Histogram: 1 0 0 0 0 0 0 0 0 1 183s 183s Total # of neighbors = 14396 183s Ave neighs/atom = 8.350348 183s Neighbor list builds = 720 183s Dangerous builds = 0 183s Total wall time: 0:00:03 184s LAMMPS (7 Feb 2024 - Update 1) 189s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 189s using 1 OpenMP thread(s) per MPI task 189s Lattice spacing in x,y,z = 1.1326962 1.9618873 1.1326962 189s Created orthogonal box = (0 0 -0.28317404) to (56.634808 43.161521 0.28317404) 189s 1 by 1 by 1 MPI processor grid 189s Created 750 atoms 189s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 189s create_atoms CPU = 0.000 seconds 189s Created 750 atoms 189s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 189s create_atoms CPU = 0.000 seconds 189s Created 112 atoms 189s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 189s create_atoms CPU = 0.000 seconds 189s Created 112 atoms 189s using lattice units in orthogonal box = (0 -0.0043161521 -0.28317404) to (56.634808 43.165837 0.28317404) 189s create_atoms CPU = 0.000 seconds 189s 750 atoms in group lo 189s 862 atoms in group lo 189s 750 atoms in group hi 189s 862 atoms in group hi 189s 150 atoms in group lo-fixed 189s 150 atoms in group hi-fixed 189s 300 atoms in group boundary 189s 1424 atoms in group mobile 189s Setting atom values ... 189s 150 settings made for type 189s Setting atom values ... 189s 150 settings made for type 189s WARNING: Temperature for thermo pressure is not for group all (src/thermo.cpp:529) 189s Generated 0 of 6 mixed pair_coeff terms from geometric mixing rule 189s Neighbor list info ... 189s update: every = 1 steps, delay = 5 steps, check = yes 189s max neighbors/atom: 2000, page size: 100000 189s master list distance cutoff = 2.8 189s ghost atom cutoff = 2.8 189s binsize = 1.4, bins = 41 31 1 189s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 189s (1) pair lj/cut, perpetual 189s attributes: half, newton on 189s pair build: half/bin/atomonly/newton 189s stencil: half/bin/2d 189s bin: standard 189s Setting up Verlet run ... 189s Unit style : lj 189s Current step : 0 189s Time step : 0.0025 189s Per MPI rank memory allocation (min/avg/max) = 3.059 | 3.059 | 3.059 Mbytes 189s Step Temp E_pair E_mol TotEng Press Volume 189s 0 0.1 -3.1333672 0 -3.0920969 -1.1437663 2444.9333 189s 1000 0.1 -3.0915072 0 -3.0502369 0.0099866805 2444.9333 189s 2000 0.1 -3.0826007 0 -3.0413304 -0.41998885 2444.9333 189s 3000 0.08982505 -3.0757908 0 -3.0387197 -0.25244271 2444.9333 189s 4000 0.098727892 -3.0666371 0 -3.0258918 -0.25382683 2444.9333 189s 5000 0.11345478 -3.0506905 0 -3.0038674 -0.029177812 2444.9333 189s 6000 0.11386723 -3.0515296 0 -3.0045363 -0.32135016 2444.9333 189s 7000 0.11555642 -3.0379879 0 -2.9902974 -0.40431662 2444.9333 189s 8000 0.10658321 -3.036405 0 -2.9924178 -0.4572299 2444.9333 189s 9000 0.11648934 -3.0271687 0 -2.9790932 -0.45898613 2444.9333 189s 10000 0.10677611 -3.0303232 0 -2.9862564 -0.35269781 2444.9333 189s 11000 0.11746006 -3.0346344 0 -2.9861583 -0.46341365 2444.9333 189s 12000 0.112074 -3.036913 0 -2.9906597 -0.21768573 2444.9333 189s 13000 0.11249017 -3.0395382 0 -2.9931132 -0.44391864 2444.9333 189s 14000 0.11381248 -3.0362108 0 -2.9892401 -0.30885868 2444.9333 189s 15000 0.10964575 -3.0436265 0 -2.9983754 -0.26625672 2444.9333 189s 16000 0.10798733 -3.0460787 0 -3.001512 -0.27971711 2444.9333 189s 17000 0.11191725 -3.0455618 0 -2.9993732 -0.36993854 2444.9333 189s 18000 0.11418143 -3.0485595 0 -3.0014364 -0.24776847 2444.9333 189s 19000 0.11028213 -3.0473558 0 -3.001842 -0.30249398 2444.9333 189s 20000 0.11512925 -3.0504969 0 -3.0029827 -0.36022205 2444.9333 189s Loop time of 5.43442 on 1 procs for 20000 steps with 1724 atoms 189s 189s Performance: 794932.945 tau/day, 3680.245 timesteps/s, 6.345 Matom-step/s 189s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads 189s 189s MPI task timing breakdown: 189s Section | min time | avg time | max time |%varavg| %total 189s --------------------------------------------------------------- 189s Pair | 4.5059 | 4.5059 | 4.5059 | 0.0 | 82.91 189s Neigh | 0.29644 | 0.29644 | 0.29644 | 0.0 | 5.45 189s Comm | 0.033024 | 0.033024 | 0.033024 | 0.0 | 0.61 189s Output | 0.00060652 | 0.00060652 | 0.00060652 | 0.0 | 0.01 189s Modify | 0.48234 | 0.48234 | 0.48234 | 0.0 | 8.88 189s Other | | 0.1161 | | | 2.14 189s 189s Nlocal: 1724 ave 1724 max 1724 min 189s Histogram: 1 0 0 0 0 0 0 0 0 0 189s Nghost: 145 ave 145 max 145 min 189s Histogram: 1 0 0 0 0 0 0 0 0 0 189s Neighs: 14397 ave 14397 max 14397 min 189s Histogram: 1 0 0 0 0 0 0 0 0 0 189s 189s Total # of neighbors = 14397 189s Ave neighs/atom = 8.3509281 189s Neighbor list builds = 723 189s Dangerous builds = 0 189s Total wall time: 0:00:05 189s run: OK 189s autopkgtest [08:55:15]: test friction: -----------------------] 190s friction PASS 190s autopkgtest [08:55:16]: test friction: - - - - - - - - - - results - - - - - - - - - - 190s autopkgtest [08:55:16]: test hugo: preparing testbed 190s Reading package lists... 190s Building dependency tree... 190s Reading state information... 191s Starting pkgProblemResolver with broken count: 0 191s Starting 2 pkgProblemResolver with broken count: 0 191s Done 191s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 192s autopkgtest [08:55:18]: test hugo: [----------------------- 192s LAMMPS (7 Feb 2024 - Update 1) 192s WARNING: Using I/O redirection is unreliable with parallel runs. Better to use the -in switch to read input files. (src/lammps.cpp:552) 192s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 192s using 1 OpenMP thread(s) per MPI task 192s Lattice spacing in x,y,z = 1.4142135 2 2 192s Created orthogonal box = (0 0 0) to (7.0710677 9.9999999 9.9999999) 192s 1 by 1 by 2 MPI processor grid 192s Created 1000 atoms 192s using lattice units in orthogonal box = (0 0 0) to (7.0710677 9.9999999 9.9999999) 192s create_atoms CPU = 0.001 seconds 192s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 192s Neighbor list info ... 192s update: every = 1 steps, delay = 0 steps, check = yes 192s max neighbors/atom: 2000, page size: 100000 192s master list distance cutoff = 1.8475372 192s ghost atom cutoff = 1.8475372 192s binsize = 0.92376862, bins = 8 11 11 192s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 192s (1) pair lj/cubic, perpetual 192s attributes: half, newton on 192s pair build: half/bin/atomonly/newton 192s stencil: half/bin/3d 192s bin: standard 192s Setting up cg style minimization ... 192s Unit style : lj 192s Current step : 0 192s WARNING: Energy due to 3 extra global DOFs will be included in minimizer energies 192s (src/min.cpp:219) 192s Per MPI rank memory allocation (min/avg/max) = 4.237 | 4.237 | 4.237 Mbytes 192s Step Temp PotEng TotEng Pxx Pyy Pzz Lx Ly Lz 192s 0 0 -6.2937536 -6.2937536 -2.7722424 -2.7722424 -2.7722424 7.0710677 9.9999999 9.9999999 192s 100 0 -6.3319014 -6.3319014 -0.75971257 -0.75971257 -0.75971257 7.0003571 9.8999999 9.8999999 192s 134 0 -6.3344253 -6.3344253 -4.2957391e-13 -4.6556764e-13 -4.6545223e-13 6.9780267 9.8684199 9.8684199 192s Loop time of 0.0439651 on 2 procs for 134 steps with 1000 atoms 192s 192s 90.0% CPU use with 2 MPI tasks x 1 OpenMP threads 192s 192s Minimization stats: 192s Stopping criterion = force tolerance 192s Energy initial, next-to-last, final = 192s -6.29375358358574 -6.33442531515467 -6.33442531515467 192s Force two-norm initial, final = 3395.2895 5.526433e-10 192s Force max component initial, final = 1960.2713 3.2059964e-10 192s Final line search alpha, max atom move = 1 3.2059964e-10 192s Iterations, force evaluations = 134 137 192s 192s MPI task timing breakdown: 192s Section | min time | avg time | max time |%varavg| %total 192s --------------------------------------------------------------- 192s Pair | 0.02583 | 0.028774 | 0.031717 | 1.7 | 65.45 192s Neigh | 0.00051906 | 0.00056002 | 0.00060097 | 0.0 | 1.27 192s Comm | 0.0036955 | 0.0066495 | 0.0096035 | 3.6 | 15.12 192s Output | 2.3062e-05 | 0.0001273 | 0.00023153 | 0.0 | 0.29 192s Modify | 0 | 0 | 0 | 0.0 | 0.00 192s Other | | 0.007855 | | | 17.87 192s 192s Nlocal: 500 ave 550 max 450 min 192s Histogram: 1 0 0 0 0 0 0 0 0 1 192s Nghost: 1214 ave 1264 max 1164 min 192s Histogram: 1 0 0 0 0 0 0 0 0 1 192s Neighs: 10500 ave 11550 max 9450 min 192s Histogram: 1 0 0 0 0 0 0 0 0 1 192s 192s Total # of neighbors = 21000 192s Ave neighs/atom = 21 192s Neighbor list builds = 1 192s Dangerous builds = 0 192s System init for write_restart ... 192s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 192s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 192s using 1 OpenMP thread(s) per MPI task 192s Reading restart file ... 192s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 192s restoring atom style atomic from restart 192s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 192s 1 by 1 by 2 MPI processor grid 192s restoring pair style lj/cubic from restart 192s 1000 atoms 192s read_restart CPU = 0.001 seconds 192s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 192s Neighbor list info ... 192s update: every = 1 steps, delay = 0 steps, check = yes 192s max neighbors/atom: 2000, page size: 100000 192s master list distance cutoff = 1.7475372 192s ghost atom cutoff = 1.7475372 192s binsize = 0.87376862, bins = 8 12 12 192s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 192s (1) pair lj/cubic, perpetual 192s attributes: half, newton on 192s pair build: half/bin/atomonly/newton 192s stencil: half/bin/3d 192s bin: standard 192s Setting up Verlet run ... 192s Unit style : lj 192s Current step : 0 192s Time step : 0.001 192s Per MPI rank memory allocation (min/avg/max) = 3.112 | 3.112 | 3.112 Mbytes 192s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 192s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014355329 -0.00025901829 9.8684199 0 -0.0048552721 2.3792932 0.0041071767 192s 1000 0.010266754 0.015384732 -2.1717334 -4183.9192 129.07798 58.489025 8.3141524 -4.1817628 0.9362044 23.511491 3.7372332 193s 2000 0.40259797 0.60329306 -5.627962 -1085.8312 12.843116 1.8560907 9.4470663 -1.0808065 -0.37219276 14.040385 0.6226867 193s 3000 0.47352764 0.70958118 -3.847268 -3270.82 65.659321 23.910002 8.6682025 -3.2676824 -0.14827512 19.052005 2.3460318 194s 4000 0.51027892 0.76465296 -4.3666607 -2668.4808 36.299422 5.4253511 8.7365217 -2.6648788 -0.43242827 14.580921 1.6947004 194s 5000 0.27107084 0.40619965 -4.8148544 -1808.6901 35.499158 7.8616668 8.7438741 -1.8042815 -0.17683868 14.465657 1.6705446 194s 6000 0.14589565 0.21862463 -4.1603429 -2363.5903 43.618418 5.9789884 8.3935297 -2.3596486 -0.050591412 14.026367 2.1169125 195s 7000 0.085822195 0.12860456 -4.2874019 -2281.4454 40.483746 3.874914 8.3489633 -2.2772866 -0.011160894 13.315551 2.0696635 195s 8000 0.039594243 0.059331974 -4.3555951 -2176.8532 39.840893 3.7201608 8.3381853 -2.1725569 0.028292259 13.163321 2.0603537 196s 9000 0.025376486 0.038026664 -4.2983996 -2330.0794 39.628092 2.631482 8.2935294 -2.3258191 0.032864503 12.942681 2.084285 196s 10000 0.020305022 0.030427075 -4.2090968 -1864.3718 42.005843 3.1326248 8.2404246 -1.8601931 0.074717463 13.108473 2.1814026 196s Loop time of 3.80888 on 2 procs for 10000 steps with 1000 atoms 196s 196s Performance: 226838.171 tau/day, 2625.442 timesteps/s, 2.625 Matom-step/s 196s 94.9% CPU use with 2 MPI tasks x 1 OpenMP threads 196s 196s MPI task timing breakdown: 196s Section | min time | avg time | max time |%varavg| %total 196s --------------------------------------------------------------- 196s Pair | 2.664 | 2.6948 | 2.7256 | 1.9 | 70.75 196s Neigh | 0.1155 | 0.11822 | 0.12093 | 0.8 | 3.10 196s Comm | 0.41353 | 0.44622 | 0.47891 | 4.9 | 11.72 196s Output | 0.00059579 | 0.0011299 | 0.001664 | 1.6 | 0.03 196s Modify | 0.49581 | 0.49859 | 0.50137 | 0.4 | 13.09 196s Other | | 0.04993 | | | 1.31 196s 196s Nlocal: 500 ave 509 max 491 min 196s Histogram: 1 0 0 0 0 0 0 0 0 1 196s Nghost: 1346.5 ave 1369 max 1324 min 196s Histogram: 1 0 0 0 0 0 0 0 0 1 196s Neighs: 10311.5 ave 10391 max 10232 min 196s Histogram: 1 0 0 0 0 0 0 0 0 1 196s 196s Total # of neighbors = 20623 196s Ave neighs/atom = 20.623 196s Neighbor list builds = 205 196s Dangerous builds = 0 196s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 196s using 1 OpenMP thread(s) per MPI task 196s Reading restart file ... 196s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 196s restoring atom style atomic from restart 196s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 196s 1 by 1 by 2 MPI processor grid 196s restoring pair style lj/cubic from restart 196s 1000 atoms 196s read_restart CPU = 0.001 seconds 196s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 196s Neighbor list info ... 196s update: every = 1 steps, delay = 0 steps, check = yes 196s max neighbors/atom: 2000, page size: 100000 196s master list distance cutoff = 1.7475372 196s ghost atom cutoff = 1.7475372 196s binsize = 0.87376862, bins = 8 12 12 196s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 196s (1) pair lj/cubic, perpetual 196s attributes: half, newton on 196s pair build: half/bin/atomonly/newton 196s stencil: half/bin/3d 196s bin: standard 196s Setting up Verlet run ... 196s Unit style : lj 196s Current step : 0 196s Time step : 0.001 196s Per MPI rank memory allocation (min/avg/max) = 3.112 | 3.112 | 3.112 Mbytes 196s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 196s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014355329 -0.00025901829 9.8684199 0 -0.0048552721 2.3792932 0.0041071767 196s 1000 0.0062790167 0.0094091065 -5.989181 -1670.9917 18.916499 7.5833446 9.2337867 -1.6650119 0.023434204 13.976079 0.92136905 197s 2000 0.0066373266 0.0099460339 -5.4562974 -2537.9609 37.066673 15.536927 8.9495838 -2.5325146 0.10236546 16.325445 1.5455989 197s 3000 0.006890427 0.010325305 -5.3657707 -2643.943 39.911802 16.807453 8.9154493 -2.6385876 0.11827588 16.639682 1.6328058 197s 4000 0.0073314031 0.010986107 -5.3630545 -2655.872 40.003435 16.849611 8.9144058 -2.6505199 0.11864983 16.649819 1.6355581 198s 5000 0.0075004567 0.011239434 -5.3630119 -2664.6029 39.9983 16.845885 8.9144863 -2.6592512 0.11845678 16.649441 1.6353853 198s 6000 0.0078159402 0.011712186 -5.3629866 -2673.5606 39.999501 16.84634 8.9144972 -2.6682093 0.11829898 16.649784 1.6354006 198s 7000 0.0078365866 0.011743125 -5.3625076 -2682.4138 40.001112 16.844623 8.9145083 -2.6770631 0.11814173 16.650214 1.6354243 199s 8000 0.0075482436 0.011311043 -5.3616205 -2690.9824 39.996485 16.835974 8.9145436 -2.6856321 0.11792207 16.649554 1.6352999 199s 9000 0.0083133885 0.012457613 -5.362258 -2700.1342 39.99904 16.841287 8.9145642 -2.6947844 0.11777124 16.650263 1.6353348 200s 10000 0.0086355586 0.012940385 -5.3622381 -2709.0315 39.997759 16.839976 8.9145913 -2.7036822 0.11757678 16.650228 1.6352858 200s Loop time of 3.56733 on 2 procs for 10000 steps with 1000 atoms 200s 200s Performance: 242197.809 tau/day, 2803.215 timesteps/s, 2.803 Matom-step/s 200s 96.2% CPU use with 2 MPI tasks x 1 OpenMP threads 200s 200s MPI task timing breakdown: 200s Section | min time | avg time | max time |%varavg| %total 200s --------------------------------------------------------------- 200s Pair | 2.3865 | 2.5087 | 2.6308 | 7.7 | 70.32 200s Neigh | 0.0056643 | 0.0056863 | 0.0057084 | 0.0 | 0.16 200s Comm | 0.35219 | 0.47364 | 0.59508 | 17.6 | 13.28 200s Output | 0.00065494 | 0.0014826 | 0.0023102 | 2.1 | 0.04 200s Modify | 0.51625 | 0.52371 | 0.53118 | 1.0 | 14.68 200s Other | | 0.05416 | | | 1.52 200s 200s Nlocal: 500 ave 508 max 492 min 200s Histogram: 1 0 0 0 0 0 0 0 0 1 200s Nghost: 1214 ave 1222 max 1206 min 200s Histogram: 1 0 0 0 0 0 0 0 0 1 200s Neighs: 10500 ave 10668 max 10332 min 200s Histogram: 1 0 0 0 0 0 0 0 0 1 200s 200s Total # of neighbors = 21000 200s Ave neighs/atom = 21 200s Neighbor list builds = 10 200s Dangerous builds = 0 200s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 200s using 1 OpenMP thread(s) per MPI task 200s Reading restart file ... 200s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 200s restoring atom style atomic from restart 200s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 200s 1 by 1 by 2 MPI processor grid 200s restoring pair style lj/cubic from restart 200s 1000 atoms 200s read_restart CPU = 0.001 seconds 200s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 200s Neighbor list info ... 200s update: every = 1 steps, delay = 0 steps, check = yes 200s max neighbors/atom: 2000, page size: 100000 200s master list distance cutoff = 1.7475372 200s ghost atom cutoff = 1.7475372 200s binsize = 0.87376862, bins = 8 12 12 200s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 200s (1) pair lj/cubic, perpetual 200s attributes: half, newton on 200s pair build: half/bin/atomonly/newton 200s stencil: half/bin/3d 200s bin: standard 200s Setting up Verlet run ... 200s Unit style : lj 200s Current step : 0 200s Time step : 0.001 200s Per MPI rank memory allocation (min/avg/max) = 3.112 | 3.112 | 3.112 Mbytes 200s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 200s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014355329 -0.00025901829 9.8684199 0 -0.0048552721 2.3792932 0.0041071767 200s 1000 0.0079519127 0.011915941 -5.50188 -838.80672 35.61641 14.888864 8.9677618 -0.83331675 0.093886135 16.160598 1.5002751 200s 2000 0.019411054 0.029087464 -5.2936665 -1019.5497 41.77353 17.564044 8.8958463 -1.0142851 0.11811209 16.853902 1.687248 201s 3000 0.047492482 0.071167484 -5.3441861 -971.66654 39.02349 16.097707 8.9321705 -0.96639352 0.073376741 16.597136 1.600557 201s 4000 0.12096417 0.18126481 -5.2102393 -1315.5664 40.846153 16.436163 8.9200987 -1.3105374 0.017574117 16.873813 1.6478442 201s 5000 0.1272463 0.19067858 -5.2517864 -1192.2753 39.105833 15.560562 8.9406854 -1.1872142 -0.00025457398 16.689339 1.5950732 202s 6000 0.14515651 0.21751704 -5.1820215 -1372.0064 40.682715 16.119979 8.9220924 -1.3670419 -0.0066818447 16.857436 1.6428451 202s 7000 0.12286771 0.18411727 -5.2596973 -1200.0518 39.255412 15.703071 8.938111 -1.1949762 0.0073588891 16.698492 1.6002966 203s 8000 0.1428801 0.21410583 -5.1748689 -1340.8702 40.704199 16.116121 8.9238602 -1.3359094 -0.0085191302 16.877378 1.6417704 203s 9000 0.12012635 0.18000933 -5.2541332 -1187.2981 39.322347 15.708304 8.9368444 -1.182224 0.0081737382 16.701561 1.6027307 203s 10000 0.1485814 0.22264922 -5.184468 -1359.9408 40.542555 16.055637 8.9246711 -1.3549789 -0.010330357 16.85094 1.6378163 203s Loop time of 3.77451 on 2 procs for 10000 steps with 1000 atoms 203s 203s Performance: 228903.773 tau/day, 2649.349 timesteps/s, 2.649 Matom-step/s 203s 95.8% CPU use with 2 MPI tasks x 1 OpenMP threads 203s 203s MPI task timing breakdown: 203s Section | min time | avg time | max time |%varavg| %total 203s --------------------------------------------------------------- 203s Pair | 2.4709 | 2.5914 | 2.7119 | 7.5 | 68.66 203s Neigh | 0.05546 | 0.057314 | 0.059169 | 0.8 | 1.52 203s Comm | 0.40803 | 0.52926 | 0.65049 | 16.7 | 14.02 203s Output | 0.000692 | 0.0017687 | 0.0028454 | 2.6 | 0.05 203s Modify | 0.52945 | 0.53664 | 0.54382 | 1.0 | 14.22 203s Other | | 0.05814 | | | 1.54 203s 203s Nlocal: 500 ave 510 max 490 min 203s Histogram: 1 0 0 0 0 0 0 0 0 1 203s Nghost: 1216.5 ave 1227 max 1206 min 203s Histogram: 1 0 0 0 0 0 0 0 0 1 203s Neighs: 10311 ave 10520 max 10102 min 203s Histogram: 1 0 0 0 0 0 0 0 0 1 203s 203s Total # of neighbors = 20622 203s Ave neighs/atom = 20.622 203s Neighbor list builds = 95 203s Dangerous builds = 0 203s Total wall time: 0:00:11 203s LAMMPS (7 Feb 2024 - Update 1) 203s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 203s using 1 OpenMP thread(s) per MPI task 203s Lattice spacing in x,y,z = 1.4142135 2 2 203s Created orthogonal box = (0 0 0) to (7.0710677 9.9999999 9.9999999) 203s 1 by 1 by 1 MPI processor grid 203s Created 1000 atoms 203s using lattice units in orthogonal box = (0 0 0) to (7.0710677 9.9999999 9.9999999) 203s create_atoms CPU = 0.000 seconds 203s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 203s Neighbor list info ... 203s update: every = 1 steps, delay = 0 steps, check = yes 203s max neighbors/atom: 2000, page size: 100000 203s master list distance cutoff = 1.8475372 203s ghost atom cutoff = 1.8475372 203s binsize = 0.92376862, bins = 8 11 11 203s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 203s (1) pair lj/cubic, perpetual 203s attributes: half, newton on 203s pair build: half/bin/atomonly/newton 203s stencil: half/bin/3d 203s bin: standard 203s Setting up cg style minimization ... 203s Unit style : lj 203s Current step : 0 203s WARNING: Energy due to 3 extra global DOFs will be included in minimizer energies 203s (src/min.cpp:219) 203s Per MPI rank memory allocation (min/avg/max) = 4.247 | 4.247 | 4.247 Mbytes 203s Step Temp PotEng TotEng Pxx Pyy Pzz Lx Ly Lz 203s 0 0 -6.2937536 -6.2937536 -2.7722424 -2.7722424 -2.7722424 7.0710677 9.9999999 9.9999999 203s 100 0 -6.3319014 -6.3319014 -0.75971257 -0.75971257 -0.75971257 7.0003571 9.8999999 9.8999999 203s 134 0 -6.3344253 -6.3344253 -4.3566216e-13 -4.7438184e-13 -4.6860149e-13 6.9780267 9.8684199 9.8684199 203s Loop time of 0.0700093 on 1 procs for 134 steps with 1000 atoms 203s 203s 98.9% CPU use with 1 MPI tasks x 1 OpenMP threads 203s 203s Minimization stats: 203s Stopping criterion = force tolerance 203s Energy initial, next-to-last, final = 203s -6.29375358358556 -6.33442531515503 -6.33442531515503 203s Force two-norm initial, final = 3395.2895 5.6047601e-10 203s Force max component initial, final = 1960.2713 3.2666928e-10 203s Final line search alpha, max atom move = 1 3.2666928e-10 203s Iterations, force evaluations = 134 137 203s 203s MPI task timing breakdown: 203s Section | min time | avg time | max time |%varavg| %total 203s --------------------------------------------------------------- 203s Pair | 0.057122 | 0.057122 | 0.057122 | 0.0 | 81.59 203s Neigh | 0.0010946 | 0.0010946 | 0.0010946 | 0.0 | 1.56 203s Comm | 0.00099833 | 0.00099833 | 0.00099833 | 0.0 | 1.43 203s Output | 2.6436e-05 | 2.6436e-05 | 2.6436e-05 | 0.0 | 0.04 203s Modify | 0 | 0 | 0 | 0.0 | 0.00 203s Other | | 0.01077 | | | 15.38 203s 203s Nlocal: 1000 ave 1000 max 1000 min 203s Histogram: 1 0 0 0 0 0 0 0 0 0 203s Nghost: 1724 ave 1724 max 1724 min 203s Histogram: 1 0 0 0 0 0 0 0 0 0 203s Neighs: 21000 ave 21000 max 21000 min 203s Histogram: 1 0 0 0 0 0 0 0 0 0 203s 203s Total # of neighbors = 21000 203s Ave neighs/atom = 21 203s Neighbor list builds = 1 203s Dangerous builds = 0 203s System init for write_restart ... 203s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 203s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 203s using 1 OpenMP thread(s) per MPI task 203s Reading restart file ... 203s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 203s restoring atom style atomic from restart 203s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 203s 1 by 1 by 1 MPI processor grid 203s restoring pair style lj/cubic from restart 203s 1000 atoms 203s read_restart CPU = 0.000 seconds 203s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 203s Neighbor list info ... 203s update: every = 1 steps, delay = 0 steps, check = yes 203s max neighbors/atom: 2000, page size: 100000 203s master list distance cutoff = 1.7475372 203s ghost atom cutoff = 1.7475372 203s binsize = 0.87376862, bins = 8 12 12 203s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 210s (1) pair lj/cubic, perpetual 210s attributes: half, newton on 210s pair build: half/bin/atomonly/newton 210s stencil: half/bin/3d 210s bin: standard 210s Setting up Verlet run ... 210s Unit style : lj 210s Current step : 0 210s Time step : 0.001 210s Per MPI rank memory allocation (min/avg/max) = 3.124 | 3.124 | 3.124 Mbytes 210s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 210s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014381062 -0.00023971829 9.8684199 0 -0.004855267 2.3814248 0.0041108563 210s 1000 0.0093381492 0.013993217 -2.1704431 -4183.8284 129.15284 58.544409 8.3142517 -4.1816719 0.93744212 23.519052 3.7381985 210s 2000 0.24794859 0.37155095 -5.8915826 -528.38691 8.3849811 1.3744297 9.5938806 -0.52286688 -0.24350394 13.910493 0.41033425 210s 3000 0.3892042 0.5832225 -3.7686896 -3442.3257 72.742382 28.486576 8.6238082 -3.4391402 0.0038227739 19.697354 2.5139569 210s 4000 0.67010303 1.0041494 -4.2080956 -2935.8105 35.596234 3.9346859 8.7508489 -2.9326065 -0.58038927 14.529876 1.6677093 210s 5000 0.41845028 0.62704774 -4.8392822 -1894.6664 30.624319 4.6370699 8.7827304 -1.8904542 -0.31998377 13.670423 1.5249748 210s 6000 0.22409652 0.33580864 -3.7653422 -2666.4156 50.804071 7.220865 8.25496 -2.6629861 -0.017448126 14.48017 2.3883779 210s 7000 0.094832865 0.14210705 -4.5432169 -2337.0271 35.853414 3.4750842 8.4475655 -2.332626 -0.052659777 12.95347 1.8841809 210s 8000 0.043338745 0.06494311 -4.6249402 -1687.4892 39.679004 6.7256868 8.4321684 -1.6829292 0.070571417 13.554654 1.9927395 210s 9000 0.018233343 0.027322664 -4.425909 -1916.4941 41.680023 5.9079935 8.3470382 -1.9120955 0.090887676 13.502397 2.1013348 210s 10000 0.0082616415 0.01238007 -4.6221264 -1723.6542 39.842157 6.5678795 8.41093 -1.7190444 0.099616538 13.484322 2.0113699 210s Loop time of 6.37096 on 1 procs for 10000 steps with 1000 atoms 210s 210s Performance: 135615.327 tau/day, 1569.622 timesteps/s, 1.570 Matom-step/s 210s 99.2% CPU use with 1 MPI tasks x 1 OpenMP threads 210s 210s MPI task timing breakdown: 210s Section | min time | avg time | max time |%varavg| %total 210s --------------------------------------------------------------- 210s Pair | 5.3145 | 5.3145 | 5.3145 | 0.0 | 83.42 210s Neigh | 0.21079 | 0.21079 | 0.21079 | 0.0 | 3.31 210s Comm | 0.08458 | 0.08458 | 0.08458 | 0.0 | 1.33 210s Output | 0.00061242 | 0.00061242 | 0.00061242 | 0.0 | 0.01 210s Modify | 0.72137 | 0.72137 | 0.72137 | 0.0 | 11.32 210s Other | | 0.03916 | | | 0.61 210s 210s Nlocal: 1000 ave 1000 max 1000 min 210s Histogram: 1 0 0 0 0 0 0 0 0 0 210s Nghost: 1886 ave 1886 max 1886 min 210s Histogram: 1 0 0 0 0 0 0 0 0 0 210s Neighs: 20874 ave 20874 max 20874 min 210s Histogram: 1 0 0 0 0 0 0 0 0 0 210s 210s Total # of neighbors = 20874 210s Ave neighs/atom = 20.874 210s Neighbor list builds = 188 210s Dangerous builds = 0 210s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 210s using 1 OpenMP thread(s) per MPI task 210s Reading restart file ... 210s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 210s restoring atom style atomic from restart 210s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 210s 1 by 1 by 1 MPI processor grid 210s restoring pair style lj/cubic from restart 210s 1000 atoms 210s read_restart CPU = 0.000 seconds 210s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 210s Neighbor list info ... 215s update: every = 1 steps, delay = 0 steps, check = yes 215s max neighbors/atom: 2000, page size: 100000 215s master list distance cutoff = 1.7475372 215s ghost atom cutoff = 1.7475372 215s binsize = 0.87376862, bins = 8 12 12 215s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 215s (1) pair lj/cubic, perpetual 215s attributes: half, newton on 215s pair build: half/bin/atomonly/newton 215s stencil: half/bin/3d 215s bin: standard 215s Setting up Verlet run ... 215s Unit style : lj 215s Current step : 0 215s Time step : 0.001 215s Per MPI rank memory allocation (min/avg/max) = 3.124 | 3.124 | 3.124 Mbytes 215s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 215s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014381062 -0.00023971829 9.8684199 0 -0.004855267 2.3814248 0.0041108563 215s 1000 0.0062572988 0.0093765623 -5.989087 -1670.9191 18.918118 7.5844401 9.2338165 -1.6649394 0.023419337 13.976997 0.92138738 215s 2000 0.0068451081 0.010257394 -5.456581 -2537.81 37.064253 15.537266 8.9496405 -2.5323637 0.10230605 16.325406 1.5455016 215s 3000 0.0073276099 0.010980423 -5.3663421 -2643.8751 39.907292 16.807489 8.9154852 -2.6385198 0.11818116 16.63905 1.6326832 215s 4000 0.0069296906 0.010384141 -5.36234 -2655.7228 40.010742 16.851482 8.9144328 -2.6503709 0.11868137 16.651571 1.6356847 215s 5000 0.0076142461 0.011409948 -5.3631443 -2664.4499 39.997648 16.846756 8.9145416 -2.6590982 0.1184114 16.649779 1.6353254 215s 6000 0.0077053831 0.011546517 -5.3628538 -2673.2444 39.991598 16.840314 8.9145803 -2.667893 0.11818361 16.648852 1.6351691 215s 7000 0.0077405663 0.011599239 -5.3623531 -2682.1589 40.000448 16.844009 8.9145774 -2.6768081 0.11809899 16.650669 1.6353525 215s 8000 0.0080673569 0.012088934 -5.3623755 -2691.0104 39.995327 16.840134 8.9146099 -2.6856601 0.11787103 16.649882 1.6352204 215s 9000 0.0083223083 0.012470979 -5.3622988 -2699.8929 40.00571 16.847764 8.9146503 -2.6945431 0.11781523 16.652389 1.6353987 215s 10000 0.0091249116 0.01367368 -5.3630138 -2708.966 39.987197 16.837314 8.9146848 -2.7036167 0.11743014 16.648832 1.6349911 215s Loop time of 5.55877 on 1 procs for 10000 steps with 1000 atoms 215s 215s Performance: 155429.936 tau/day, 1798.958 timesteps/s, 1.799 Matom-step/s 215s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads 215s 215s MPI task timing breakdown: 215s Section | min time | avg time | max time |%varavg| %total 215s --------------------------------------------------------------- 215s Pair | 4.7103 | 4.7103 | 4.7103 | 0.0 | 84.74 215s Neigh | 0.012273 | 0.012273 | 0.012273 | 0.0 | 0.22 215s Comm | 0.073237 | 0.073237 | 0.073237 | 0.0 | 1.32 215s Output | 0.0011364 | 0.0011364 | 0.0011364 | 0.0 | 0.02 215s Modify | 0.72524 | 0.72524 | 0.72524 | 0.0 | 13.05 215s Other | | 0.03662 | | | 0.66 215s 215s Nlocal: 1000 ave 1000 max 1000 min 215s Histogram: 1 0 0 0 0 0 0 0 0 0 215s Nghost: 1724 ave 1724 max 1724 min 215s Histogram: 1 0 0 0 0 0 0 0 0 0 215s Neighs: 21000 ave 21000 max 21000 min 215s Histogram: 1 0 0 0 0 0 0 0 0 0 215s 215s Total # of neighbors = 21000 215s Ave neighs/atom = 21 215s Neighbor list builds = 11 215s Dangerous builds = 0 215s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 215s using 1 OpenMP thread(s) per MPI task 215s Reading restart file ... 215s restart file = 7 Feb 2024, LAMMPS = 7 Feb 2024 215s restoring atom style atomic from restart 221s orthogonal box = (0.046520549 0.065789991 0.065789991) to (7.0245472 9.9342099 9.9342099) 221s 1 by 1 by 1 MPI processor grid 221s restoring pair style lj/cubic from restart 221s 1000 atoms 221s read_restart CPU = 0.000 seconds 221s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 221s Neighbor list info ... 221s update: every = 1 steps, delay = 0 steps, check = yes 221s max neighbors/atom: 2000, page size: 100000 221s master list distance cutoff = 1.7475372 221s ghost atom cutoff = 1.7475372 221s binsize = 0.87376862, bins = 8 12 12 221s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 221s (1) pair lj/cubic, perpetual 221s attributes: half, newton on 221s pair build: half/bin/atomonly/newton 221s stencil: half/bin/3d 221s bin: standard 221s Setting up Verlet run ... 221s Unit style : lj 221s Current step : 0 221s Time step : 0.001 221s Per MPI rank memory allocation (min/avg/max) = 3.124 | 3.124 | 3.124 Mbytes 221s Step Temp KinEng E_pair Econserve Pzz v_tau Lz f_myhug v_dele v_us v_up 221s 0 0.01 0.014985 -6.3344253 -6.3194403 0.014381062 -0.00023971829 9.8684199 0 -0.004855267 2.3814248 0.0041108563 221s 1000 0.0083300318 0.012482553 -5.5023183 -838.99233 35.610078 14.886668 8.9677982 -0.83350249 0.093761717 16.159482 1.500112 221s 2000 0.020386436 0.030549075 -5.294934 -1021.4347 41.760404 17.563313 8.8960328 -1.0161703 0.1178086 16.852842 1.6868239 221s 3000 0.049693082 0.074465084 -5.3469418 -982.1922 39.030412 16.123502 8.9325589 -0.97691972 0.073097533 16.601991 1.6003728 221s 4000 0.11859524 0.17771497 -5.207074 -1299.948 40.941639 16.507821 8.9213137 -1.2949186 0.018189971 16.904165 1.6487306 221s 5000 0.130146 0.19502378 -5.261025 -1208.3405 39.059595 15.609328 8.9431689 -1.2032745 -0.00023811036 16.701434 1.5920334 221s 6000 0.13812959 0.20698719 -5.1710048 -1334.1421 40.904888 16.242199 8.9222846 -1.329178 -0.0044756362 16.90509 1.6471606 221s 7000 0.12107441 0.18143001 -5.2602562 -1170.0585 39.060849 15.577606 8.9397535 -1.1649797 0.005587398 16.671517 1.5949415 221s 8000 0.14333426 0.21478639 -5.1717109 -1352.635 40.876285 16.205871 8.9218128 -1.3476781 -0.0069373292 16.895041 1.6469877 221s 9000 0.12159783 0.18221435 -5.2591928 -1186.8604 39.22852 15.6778 8.9376658 -1.1817834 0.0077335044 16.68885 1.6001243 221s 10000 0.15321647 0.22959488 -5.188176 -1391.2245 40.666599 16.146259 8.9228489 -1.3862659 -0.0091900905 16.860718 1.6418747 221s Loop time of 5.72155 on 1 procs for 10000 steps with 1000 atoms 221s 221s Performance: 151007.985 tau/day, 1747.778 timesteps/s, 1.748 Matom-step/s 221s 99.7% CPU use with 1 MPI tasks x 1 OpenMP threads 221s 221s MPI task timing breakdown: 221s Section | min time | avg time | max time |%varavg| %total 221s --------------------------------------------------------------- 221s Pair | 4.7751 | 4.7751 | 4.7751 | 0.0 | 83.46 221s Neigh | 0.10717 | 0.10717 | 0.10717 | 0.0 | 1.87 221s Comm | 0.077161 | 0.077161 | 0.077161 | 0.0 | 1.35 221s Output | 0.00064438 | 0.00064438 | 0.00064438 | 0.0 | 0.01 221s Modify | 0.72331 | 0.72331 | 0.72331 | 0.0 | 12.64 221s Other | | 0.03814 | | | 0.67 221s 221s Nlocal: 1000 ave 1000 max 1000 min 221s Histogram: 1 0 0 0 0 0 0 0 0 0 221s Nghost: 1724 ave 1724 max 1724 min 221s Histogram: 1 0 0 0 0 0 0 0 0 0 221s Neighs: 20654 ave 20654 max 20654 min 221s Histogram: 1 0 0 0 0 0 0 0 0 0 221s 221s Total # of neighbors = 20654 221s Ave neighs/atom = 20.654 221s Neighbor list builds = 94 221s Dangerous builds = 0 221s Total wall time: 0:00:17 221s run: OK 221s autopkgtest [08:55:47]: test hugo: -----------------------] 222s hugo PASS 222s autopkgtest [08:55:48]: test hugo: - - - - - - - - - - results - - - - - - - - - - 222s autopkgtest [08:55:48]: test command1: preparing testbed 318s autopkgtest [08:57:24]: testbed dpkg architecture: ppc64el 319s autopkgtest [08:57:25]: testbed apt version: 3.0.0 319s autopkgtest [08:57:25]: @@@@@@@@@@@@@@@@@@@@ test bed setup 319s autopkgtest [08:57:25]: testbed release detected to be: questing 320s autopkgtest [08:57:26]: updating testbed package index (apt update) 320s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB] 320s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 320s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 321s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 321s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [33.3 kB] 321s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [130 kB] 321s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [1235 kB] 321s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main ppc64el Packages [173 kB] 321s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe ppc64el Packages [1216 kB] 321s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse ppc64el Packages [31.7 kB] 321s Fetched 2929 kB in 1s (2155 kB/s) 323s Reading package lists... 323s autopkgtest [08:57:29]: upgrading testbed (apt dist-upgrade and autopurge) 323s Reading package lists... 324s Building dependency tree... 324s Reading state information... 324s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 324s Starting 2 pkgProblemResolver with broken count: 0 324s Done 325s Entering ResolveByKeep 325s 326s Calculating upgrade... 326s The following packages will be upgraded: 326s libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libpython3.13 326s libpython3.13-minimal libpython3.13-stdlib publicsuffix python3.13 326s python3.13-gdbm python3.13-minimal 326s 10 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 326s Need to get 14.5 MB of archives. 326s After this operation, 221 kB disk space will be freed. 326s Get:1 http://ftpmaster.internal/ubuntu questing-proposed/main ppc64el python3.13 ppc64el 3.13.3-2 [739 kB] 326s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main ppc64el libpython3.13 ppc64el 3.13.3-2 [2544 kB] 326s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main ppc64el libpython3.13-stdlib ppc64el 3.13.3-2 [2110 kB] 327s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main ppc64el python3.13-minimal ppc64el 3.13.3-2 [2502 kB] 327s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main ppc64el libpython3.13-minimal ppc64el 3.13.3-2 [886 kB] 327s Get:6 http://ftpmaster.internal/ubuntu questing/main ppc64el publicsuffix all 20250328.1952-0.1 [135 kB] 327s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/universe ppc64el libpython3.12t64 ppc64el 3.12.10-1 [2558 kB] 327s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/universe ppc64el libpython3.12-stdlib ppc64el 3.12.10-1 [2105 kB] 327s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe ppc64el libpython3.12-minimal ppc64el 3.12.10-1 [841 kB] 327s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/main ppc64el python3.13-gdbm ppc64el 3.13.3-2 [32.3 kB] 327s Fetched 14.5 MB in 1s (13.3 MB/s) 328s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 107204 files and directories currently installed.) 328s Preparing to unpack .../0-python3.13_3.13.3-2_ppc64el.deb ... 328s Unpacking python3.13 (3.13.3-2) over (3.13.3-1) ... 328s Preparing to unpack .../1-libpython3.13_3.13.3-2_ppc64el.deb ... 328s Unpacking libpython3.13:ppc64el (3.13.3-2) over (3.13.3-1) ... 328s Preparing to unpack .../2-libpython3.13-stdlib_3.13.3-2_ppc64el.deb ... 328s Unpacking libpython3.13-stdlib:ppc64el (3.13.3-2) over (3.13.3-1) ... 328s Preparing to unpack .../3-python3.13-minimal_3.13.3-2_ppc64el.deb ... 328s Unpacking python3.13-minimal (3.13.3-2) over (3.13.3-1) ... 328s Preparing to unpack .../4-libpython3.13-minimal_3.13.3-2_ppc64el.deb ... 328s Unpacking libpython3.13-minimal:ppc64el (3.13.3-2) over (3.13.3-1) ... 328s Preparing to unpack .../5-publicsuffix_20250328.1952-0.1_all.deb ... 328s Unpacking publicsuffix (20250328.1952-0.1) over (20250108.1153-0.1) ... 328s Preparing to unpack .../6-libpython3.12t64_3.12.10-1_ppc64el.deb ... 328s Unpacking libpython3.12t64:ppc64el (3.12.10-1) over (3.12.8-3) ... 328s Preparing to unpack .../7-libpython3.12-stdlib_3.12.10-1_ppc64el.deb ... 328s Unpacking libpython3.12-stdlib:ppc64el (3.12.10-1) over (3.12.8-3) ... 329s Preparing to unpack .../8-libpython3.12-minimal_3.12.10-1_ppc64el.deb ... 329s Unpacking libpython3.12-minimal:ppc64el (3.12.10-1) over (3.12.8-3) ... 329s Preparing to unpack .../9-python3.13-gdbm_3.13.3-2_ppc64el.deb ... 329s Unpacking python3.13-gdbm (3.13.3-2) over (3.13.3-1) ... 329s Setting up libpython3.12-minimal:ppc64el (3.12.10-1) ... 329s Setting up libpython3.13-minimal:ppc64el (3.13.3-2) ... 329s Setting up python3.13-minimal (3.13.3-2) ... 330s Setting up libpython3.13-stdlib:ppc64el (3.13.3-2) ... 330s Setting up publicsuffix (20250328.1952-0.1) ... 330s Setting up python3.13-gdbm (3.13.3-2) ... 330s Setting up libpython3.13:ppc64el (3.13.3-2) ... 330s Setting up libpython3.12-stdlib:ppc64el (3.12.10-1) ... 330s Setting up python3.13 (3.13.3-2) ... 331s Setting up libpython3.12t64:ppc64el (3.12.10-1) ... 331s Processing triggers for systemd (257.4-1ubuntu3) ... 331s Processing triggers for man-db (2.13.0-1) ... 332s Processing triggers for libc-bin (2.41-6ubuntu1) ... 332s Reading package lists... 332s Building dependency tree... 332s Reading state information... 333s Starting pkgProblemResolver with broken count: 0 333s Starting 2 pkgProblemResolver with broken count: 0 333s Done 333s Solving dependencies... 334s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 337s Reading package lists... 337s Building dependency tree... 337s Reading state information... 337s Starting pkgProblemResolver with broken count: 0 337s Starting 2 pkgProblemResolver with broken count: 0 337s Done 338s The following NEW packages will be installed: 338s autoconf automake autotools-dev cpp-14 cpp-14-powerpc64le-linux-gnu 338s fontconfig-config fonts-dejavu-core fonts-dejavu-mono gcc-14 338s gcc-14-powerpc64le-linux-gnu gfortran-14 gfortran-14-powerpc64le-linux-gnu 338s libaec0 libamd-comgr2 libamdhip64-5 libasan8 libblas3 libcairo2 libcc1-0 338s libdeflate0 libdouble-conversion3 libevent-2.1-7t64 libevent-dev 338s libevent-extra-2.1-7t64 libevent-openssl-2.1-7t64 libevent-pthreads-2.1-7t64 338s libfabric1 libfftw3-double3 libfontconfig1 libgbm1 libgcc-14-dev 338s libgfortran-14-dev libgfortran5 libgl1 libgl1-mesa-dri libgl2ps1.4 338s libglew2.2 libglvnd0 libglx-mesa0 libglx0 libgomp1 libhdf5-310 338s libhdf5-hl-310 libhsa-runtime64-1 libhsakmt1 libhwloc-dev libhwloc-plugins 338s libhwloc15 libibmad5 libibumad3 libibverbs-dev libisl23 libitm1 libjbig0 338s libjpeg-turbo8 libjpeg8 libjs-jquery libjs-jquery-ui libjsoncpp26 338s libkim-api2 liblammps-dev liblammps0t64 liblapack3 liblerc4 libllvm17t64 338s liblsan0 libltdl-dev libltdl7 libmpc3 libmunge2 libnetcdf22 libnl-3-dev 338s libnl-route-3-dev libnuma-dev libogg0 libopengl0 libopenmpi-dev libopenmpi40 338s libpciaccess0 libpixman-1-0 libpmix-dev libpmix2t64 libpnetcdf6 libproj25 338s libquadmath0 librdmacm1t64 libsharpyuv0 libsz2 libtbb12 libtbbbind-2-5 338s libtbbmalloc2 libtcl8.6 libtheoradec1 libtheoraenc1 libtiff6 libtk8.6 338s libtsan2 libubsan1 libucx0 libvoro++1 libvtk9.3 libvulkan1 338s libwayland-server0 libwebp7 libx11-xcb1 libxcb-dri3-0 libxcb-glx0 338s libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shm0 libxcb-sync1 338s libxcb-xfixes0 libxft2 libxnvctrl0 libxrender1 libxshmfence1 libxss1 338s libxxf86vm1 m4 mesa-libgallium mpi-default-bin mpi-default-dev 338s ocl-icd-libopencl1 openmpi-bin openmpi-common proj-data python3-lammps 338s x11-common zlib1g-dev 338s 0 upgraded, 130 newly installed, 0 to remove and 0 not upgraded. 338s Need to get 194 MB of archives. 338s After this operation, 832 MB of additional disk space will be used. 338s Get:1 http://ftpmaster.internal/ubuntu questing/main ppc64el m4 ppc64el 1.4.19-7 [279 kB] 338s Get:2 http://ftpmaster.internal/ubuntu questing/main ppc64el autoconf all 2.72-3ubuntu1 [383 kB] 338s Get:3 http://ftpmaster.internal/ubuntu questing/main ppc64el autotools-dev all 20240727.1 [43.4 kB] 338s Get:4 http://ftpmaster.internal/ubuntu questing/main ppc64el automake all 1:1.17-3ubuntu1 [572 kB] 338s Get:5 http://ftpmaster.internal/ubuntu questing/main ppc64el libisl23 ppc64el 0.27-1 [882 kB] 339s Get:6 http://ftpmaster.internal/ubuntu questing/main ppc64el libmpc3 ppc64el 1.3.1-1build2 [62.1 kB] 339s Get:7 http://ftpmaster.internal/ubuntu questing/main ppc64el cpp-14-powerpc64le-linux-gnu ppc64el 14.2.0-19ubuntu2 [10.5 MB] 339s Get:8 http://ftpmaster.internal/ubuntu questing/main ppc64el cpp-14 ppc64el 14.2.0-19ubuntu2 [1036 B] 339s Get:9 http://ftpmaster.internal/ubuntu questing/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB] 340s Get:10 http://ftpmaster.internal/ubuntu questing/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB] 340s Get:11 http://ftpmaster.internal/ubuntu questing/main ppc64el fontconfig-config ppc64el 2.15.0-2.2ubuntu1 [37.9 kB] 340s Get:12 http://ftpmaster.internal/ubuntu questing/main ppc64el libcc1-0 ppc64el 15-20250404-0ubuntu1 [48.6 kB] 340s Get:13 http://ftpmaster.internal/ubuntu questing/main ppc64el libgomp1 ppc64el 15-20250404-0ubuntu1 [168 kB] 340s Get:14 http://ftpmaster.internal/ubuntu questing/main ppc64el libitm1 ppc64el 15-20250404-0ubuntu1 [32.3 kB] 340s Get:15 http://ftpmaster.internal/ubuntu questing/main ppc64el libasan8 ppc64el 15-20250404-0ubuntu1 [3007 kB] 340s Get:16 http://ftpmaster.internal/ubuntu questing/main ppc64el liblsan0 ppc64el 15-20250404-0ubuntu1 [1374 kB] 340s Get:17 http://ftpmaster.internal/ubuntu questing/main ppc64el libtsan2 ppc64el 15-20250404-0ubuntu1 [2732 kB] 340s Get:18 http://ftpmaster.internal/ubuntu questing/main ppc64el libubsan1 ppc64el 15-20250404-0ubuntu1 [1232 kB] 340s Get:19 http://ftpmaster.internal/ubuntu questing/main ppc64el libquadmath0 ppc64el 15-20250404-0ubuntu1 [160 kB] 340s Get:20 http://ftpmaster.internal/ubuntu questing/main ppc64el libgcc-14-dev ppc64el 14.2.0-19ubuntu2 [1618 kB] 341s Get:21 http://ftpmaster.internal/ubuntu questing/main ppc64el gcc-14-powerpc64le-linux-gnu ppc64el 14.2.0-19ubuntu2 [20.6 MB] 342s Get:22 http://ftpmaster.internal/ubuntu questing/main ppc64el gcc-14 ppc64el 14.2.0-19ubuntu2 [540 kB] 342s Get:23 http://ftpmaster.internal/ubuntu questing/main ppc64el libgfortran5 ppc64el 15-20250404-0ubuntu1 [615 kB] 343s Get:24 http://ftpmaster.internal/ubuntu questing/main ppc64el libgfortran-14-dev ppc64el 14.2.0-19ubuntu2 [620 kB] 343s Get:25 http://ftpmaster.internal/ubuntu questing/main ppc64el gfortran-14-powerpc64le-linux-gnu ppc64el 14.2.0-19ubuntu2 [11.3 MB] 344s Get:26 http://ftpmaster.internal/ubuntu questing/main ppc64el gfortran-14 ppc64el 14.2.0-19ubuntu2 [14.2 kB] 344s Get:27 http://ftpmaster.internal/ubuntu questing/universe ppc64el libaec0 ppc64el 1.1.3-1 [30.1 kB] 344s Get:28 http://ftpmaster.internal/ubuntu questing/universe ppc64el libllvm17t64 ppc64el 1:17.0.6-21 [27.0 MB] 346s Get:29 http://ftpmaster.internal/ubuntu questing/universe ppc64el libamd-comgr2 ppc64el 6.0+git20231212.4510c28+dfsg-3build2 [15.3 MB] 347s Get:30 http://ftpmaster.internal/ubuntu questing/universe ppc64el libhsakmt1 ppc64el 5.7.0-1build1 [76.4 kB] 347s Get:31 http://ftpmaster.internal/ubuntu questing/universe ppc64el libhsa-runtime64-1 ppc64el 5.7.1-2build1 [330 kB] 347s Get:32 http://ftpmaster.internal/ubuntu questing/universe ppc64el libamdhip64-5 ppc64el 5.7.1-5.1 [9349 kB] 348s Get:33 http://ftpmaster.internal/ubuntu questing/main ppc64el libblas3 ppc64el 3.12.1-2 [239 kB] 348s Get:34 http://ftpmaster.internal/ubuntu questing/main ppc64el libfontconfig1 ppc64el 2.15.0-2.2ubuntu1 [187 kB] 348s Get:35 http://ftpmaster.internal/ubuntu questing/main ppc64el libpixman-1-0 ppc64el 0.44.0-3 [334 kB] 348s Get:36 http://ftpmaster.internal/ubuntu questing/main ppc64el libxcb-render0 ppc64el 1.17.0-2 [17.2 kB] 348s Get:37 http://ftpmaster.internal/ubuntu questing/main ppc64el libxcb-shm0 ppc64el 1.17.0-2 [5980 B] 348s Get:38 http://ftpmaster.internal/ubuntu questing/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1build1 [23.1 kB] 348s Get:39 http://ftpmaster.internal/ubuntu questing/main ppc64el libcairo2 ppc64el 1.18.4-1 [746 kB] 348s Get:40 http://ftpmaster.internal/ubuntu questing/main ppc64el libdeflate0 ppc64el 1.23-2 [63.3 kB] 348s Get:41 http://ftpmaster.internal/ubuntu questing/universe ppc64el libdouble-conversion3 ppc64el 3.3.1-1 [46.3 kB] 348s Get:42 http://ftpmaster.internal/ubuntu questing/main ppc64el libevent-2.1-7t64 ppc64el 2.1.12-stable-10 [172 kB] 348s Get:43 http://ftpmaster.internal/ubuntu questing/main ppc64el libevent-extra-2.1-7t64 ppc64el 2.1.12-stable-10 [75.7 kB] 348s Get:44 http://ftpmaster.internal/ubuntu questing/main ppc64el libevent-pthreads-2.1-7t64 ppc64el 2.1.12-stable-10 [8026 B] 348s Get:45 http://ftpmaster.internal/ubuntu questing/main ppc64el libevent-openssl-2.1-7t64 ppc64el 2.1.12-stable-10 [16.9 kB] 348s Get:46 http://ftpmaster.internal/ubuntu questing/main ppc64el libevent-dev ppc64el 2.1.12-stable-10 [331 kB] 348s Get:47 http://ftpmaster.internal/ubuntu questing/main ppc64el librdmacm1t64 ppc64el 56.0-4ubuntu1 [80.2 kB] 348s Get:48 http://ftpmaster.internal/ubuntu questing/universe ppc64el libfabric1 ppc64el 1.17.0-3.1 [693 kB] 348s Get:49 http://ftpmaster.internal/ubuntu questing/main ppc64el libfftw3-double3 ppc64el 3.3.10-2fakesync1build1 [443 kB] 348s Get:50 http://ftpmaster.internal/ubuntu questing/main ppc64el libwayland-server0 ppc64el 1.23.1-3 [42.4 kB] 349s Get:51 http://ftpmaster.internal/ubuntu questing/main ppc64el libx11-xcb1 ppc64el 2:1.8.10-2 [8008 B] 349s Get:52 http://ftpmaster.internal/ubuntu questing/main ppc64el libxcb-dri3-0 ppc64el 1.17.0-2 [7842 B] 349s Get:53 http://ftpmaster.internal/ubuntu questing/main ppc64el libxcb-present0 ppc64el 1.17.0-2 [6276 B] 349s Get:54 http://ftpmaster.internal/ubuntu questing/main ppc64el libxcb-randr0 ppc64el 1.17.0-2 [19.1 kB] 349s Get:55 http://ftpmaster.internal/ubuntu questing/main ppc64el libxcb-sync1 ppc64el 1.17.0-2 [9804 B] 349s Get:56 http://ftpmaster.internal/ubuntu questing/main ppc64el libxcb-xfixes0 ppc64el 1.17.0-2 [10.7 kB] 349s Get:57 http://ftpmaster.internal/ubuntu questing/main ppc64el libxshmfence1 ppc64el 1.3.3-1 [5364 B] 349s Get:58 http://ftpmaster.internal/ubuntu questing/main ppc64el mesa-libgallium ppc64el 25.0.3-1ubuntu2 [9535 kB] 349s Get:59 http://ftpmaster.internal/ubuntu questing/main ppc64el libgbm1 ppc64el 25.0.3-1ubuntu2 [39.1 kB] 349s Get:60 http://ftpmaster.internal/ubuntu questing/main ppc64el libvulkan1 ppc64el 1.4.309.0-1 [162 kB] 349s Get:61 http://ftpmaster.internal/ubuntu questing/main ppc64el libgl1-mesa-dri ppc64el 25.0.3-1ubuntu2 [35.1 kB] 349s Get:62 http://ftpmaster.internal/ubuntu questing/main ppc64el libglvnd0 ppc64el 1.7.0-1build1 [72.4 kB] 349s Get:63 http://ftpmaster.internal/ubuntu questing/main ppc64el libxcb-glx0 ppc64el 1.17.0-2 [26.3 kB] 349s Get:64 http://ftpmaster.internal/ubuntu questing/main ppc64el libxxf86vm1 ppc64el 1:1.1.4-1build4 [11.1 kB] 349s Get:65 http://ftpmaster.internal/ubuntu questing/main ppc64el libglx-mesa0 ppc64el 25.0.3-1ubuntu2 [175 kB] 349s Get:66 http://ftpmaster.internal/ubuntu questing/main ppc64el libglx0 ppc64el 1.7.0-1build1 [42.7 kB] 349s Get:67 http://ftpmaster.internal/ubuntu questing/main ppc64el libgl1 ppc64el 1.7.0-1build1 [107 kB] 349s Get:68 http://ftpmaster.internal/ubuntu questing/universe ppc64el libgl2ps1.4 ppc64el 1.4.2+dfsg1-2build1 [52.6 kB] 349s Get:69 http://ftpmaster.internal/ubuntu questing/universe ppc64el libglew2.2 ppc64el 2.2.0-4build1 [186 kB] 349s Get:70 http://ftpmaster.internal/ubuntu questing/universe ppc64el libsz2 ppc64el 1.1.3-1 [5566 B] 349s Get:71 http://ftpmaster.internal/ubuntu questing/universe ppc64el libhdf5-310 ppc64el 1.14.5+repack-3 [1523 kB] 350s Get:72 http://ftpmaster.internal/ubuntu questing/universe ppc64el libhdf5-hl-310 ppc64el 1.14.5+repack-3 [74.9 kB] 350s Get:73 http://ftpmaster.internal/ubuntu questing/universe ppc64el libhwloc15 ppc64el 2.12.0-1 [221 kB] 350s Get:74 http://ftpmaster.internal/ubuntu questing/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-3ubuntu2 [215 kB] 350s Get:75 http://ftpmaster.internal/ubuntu questing/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 350s Get:76 http://ftpmaster.internal/ubuntu questing/main ppc64el libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 350s Get:77 http://ftpmaster.internal/ubuntu questing/universe ppc64el libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 350s Get:78 http://ftpmaster.internal/ubuntu questing/main ppc64el libjsoncpp26 ppc64el 1.9.6-3 [91.3 kB] 350s Get:79 http://ftpmaster.internal/ubuntu questing/universe ppc64el libkim-api2 ppc64el 2.3.0-1ubuntu1 [605 kB] 350s Get:80 http://ftpmaster.internal/ubuntu questing/main ppc64el liblapack3 ppc64el 3.12.1-2 [2813 kB] 350s Get:81 http://ftpmaster.internal/ubuntu questing/universe ppc64el libnetcdf22 ppc64el 1:4.9.3-1 [639 kB] 350s Get:82 http://ftpmaster.internal/ubuntu questing/universe ppc64el libmunge2 ppc64el 0.5.16-1 [17.3 kB] 350s Get:83 http://ftpmaster.internal/ubuntu questing/main ppc64el libpciaccess0 ppc64el 0.17-3build1 [21.4 kB] 350s Get:84 http://ftpmaster.internal/ubuntu questing/main ppc64el libxnvctrl0 ppc64el 510.47.03-0ubuntu4 [12.6 kB] 350s Get:85 http://ftpmaster.internal/ubuntu questing/universe ppc64el ocl-icd-libopencl1 ppc64el 2.3.2-1build1 [42.9 kB] 350s Get:86 http://ftpmaster.internal/ubuntu questing/universe ppc64el libhwloc-plugins ppc64el 2.12.0-1 [17.5 kB] 350s Get:87 http://ftpmaster.internal/ubuntu questing/universe ppc64el libpmix2t64 ppc64el 5.0.6-5 [759 kB] 350s Get:88 http://ftpmaster.internal/ubuntu questing/main ppc64el libibumad3 ppc64el 56.0-4ubuntu1 [33.7 kB] 350s Get:89 http://ftpmaster.internal/ubuntu questing/main ppc64el libibmad5 ppc64el 56.0-4ubuntu1 [47.0 kB] 350s Get:90 http://ftpmaster.internal/ubuntu questing/universe ppc64el libucx0 ppc64el 1.18.1+ds-2 [1294 kB] 350s Get:91 http://ftpmaster.internal/ubuntu questing/universe ppc64el libopenmpi40 ppc64el 5.0.7-1 [2617 kB] 350s Get:92 http://ftpmaster.internal/ubuntu questing/universe ppc64el libpnetcdf6 ppc64el 1.14.0-2 [1651 kB] 351s Get:93 http://ftpmaster.internal/ubuntu questing/universe ppc64el libvoro++1 ppc64el 0.5+revert-to-0.4.6+dfsg1-1 [117 kB] 351s Get:94 http://ftpmaster.internal/ubuntu questing/main ppc64el libogg0 ppc64el 1.3.5-3build1 [27.6 kB] 351s Get:95 http://ftpmaster.internal/ubuntu questing/main ppc64el libopengl0 ppc64el 1.7.0-1build1 [35.5 kB] 351s Get:96 http://ftpmaster.internal/ubuntu questing/universe ppc64el proj-data all 9.5.1-1 [7924 kB] 351s Get:97 http://ftpmaster.internal/ubuntu questing/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu2 [35.9 kB] 351s Get:98 http://ftpmaster.internal/ubuntu questing/main ppc64el liblerc4 ppc64el 4.0.0+ds-5ubuntu1 [298 kB] 351s Get:99 http://ftpmaster.internal/ubuntu questing/main ppc64el libsharpyuv0 ppc64el 1.5.0-0.1 [22.3 kB] 351s Get:100 http://ftpmaster.internal/ubuntu questing/main ppc64el libwebp7 ppc64el 1.5.0-0.1 [315 kB] 351s Get:101 http://ftpmaster.internal/ubuntu questing/main ppc64el libtiff6 ppc64el 4.7.0-3ubuntu1 [283 kB] 352s Get:102 http://ftpmaster.internal/ubuntu questing/universe ppc64el libproj25 ppc64el 9.5.1-1 [1517 kB] 352s Get:103 http://ftpmaster.internal/ubuntu questing/universe ppc64el libtbbbind-2-5 ppc64el 2022.0.0-2 [15.8 kB] 352s Get:104 http://ftpmaster.internal/ubuntu questing/universe ppc64el libtbbmalloc2 ppc64el 2022.0.0-2 [62.0 kB] 352s Get:105 http://ftpmaster.internal/ubuntu questing/universe ppc64el libtbb12 ppc64el 2022.0.0-2 [105 kB] 352s Get:106 http://ftpmaster.internal/ubuntu questing/main ppc64el libtcl8.6 ppc64el 8.6.16+dfsg-1 [1201 kB] 352s Get:107 http://ftpmaster.internal/ubuntu questing/main ppc64el libtheoradec1 ppc64el 1.2.0~alpha1+dfsg-6 [89.5 kB] 352s Get:108 http://ftpmaster.internal/ubuntu questing/main ppc64el libtheoraenc1 ppc64el 1.2.0~alpha1+dfsg-6 [155 kB] 352s Get:109 http://ftpmaster.internal/ubuntu questing/main ppc64el libxft2 ppc64el 2.3.6-1build1 [61.5 kB] 352s Get:110 http://ftpmaster.internal/ubuntu questing/main ppc64el x11-common all 1:7.7+23ubuntu4 [21.8 kB] 352s Get:111 http://ftpmaster.internal/ubuntu questing/main ppc64el libxss1 ppc64el 1:1.2.3-1build3 [7980 B] 352s Get:112 http://ftpmaster.internal/ubuntu questing/main ppc64el libtk8.6 ppc64el 8.6.16-1 [946 kB] 352s Get:113 http://ftpmaster.internal/ubuntu questing/universe ppc64el libvtk9.3 ppc64el 9.3.0+dfsg1-4ubuntu1 [26.7 MB] 353s Get:114 http://ftpmaster.internal/ubuntu questing/universe ppc64el liblammps0t64 ppc64el 20240207+dfsg-3build3 [8640 kB] 353s Get:115 http://ftpmaster.internal/ubuntu questing/universe ppc64el openmpi-common all 5.0.7-1 [97.9 kB] 353s Get:116 http://ftpmaster.internal/ubuntu questing/main ppc64el libnl-3-dev ppc64el 3.7.0-2 [130 kB] 353s Get:117 http://ftpmaster.internal/ubuntu questing/main ppc64el libnl-route-3-dev ppc64el 3.7.0-2 [255 kB] 353s Get:118 http://ftpmaster.internal/ubuntu questing/main ppc64el libibverbs-dev ppc64el 56.0-4ubuntu1 [746 kB] 353s Get:119 http://ftpmaster.internal/ubuntu questing/main ppc64el libnuma-dev ppc64el 2.0.18-1build1 [45.7 kB] 353s Get:120 http://ftpmaster.internal/ubuntu questing/main ppc64el libltdl7 ppc64el 2.5.4-4 [50.3 kB] 353s Get:121 http://ftpmaster.internal/ubuntu questing/main ppc64el libltdl-dev ppc64el 2.5.4-4 [181 kB] 353s Get:122 http://ftpmaster.internal/ubuntu questing/universe ppc64el libhwloc-dev ppc64el 2.12.0-1 [323 kB] 353s Get:123 http://ftpmaster.internal/ubuntu questing/main ppc64el zlib1g-dev ppc64el 1:1.3.dfsg+really1.3.1-1ubuntu1 [902 kB] 353s Get:124 http://ftpmaster.internal/ubuntu questing/universe ppc64el libpmix-dev ppc64el 5.0.6-5 [4163 kB] 353s Get:125 http://ftpmaster.internal/ubuntu questing/universe ppc64el openmpi-bin ppc64el 5.0.7-1 [214 kB] 353s Get:126 http://ftpmaster.internal/ubuntu questing/universe ppc64el libopenmpi-dev ppc64el 5.0.7-1 [1084 kB] 353s Get:127 http://ftpmaster.internal/ubuntu questing/universe ppc64el mpi-default-dev ppc64el 1.18 [3324 B] 353s Get:128 http://ftpmaster.internal/ubuntu questing/universe ppc64el liblammps-dev ppc64el 20240207+dfsg-3build3 [112 kB] 353s Get:129 http://ftpmaster.internal/ubuntu questing/universe ppc64el mpi-default-bin ppc64el 1.18 [2510 B] 353s Get:130 http://ftpmaster.internal/ubuntu questing/universe ppc64el python3-lammps ppc64el 20240207+dfsg-3build3 [70.5 kB] 354s Fetched 194 MB in 16s (12.5 MB/s) 354s Selecting previously unselected package m4. 354s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 107204 files and directories currently installed.) 354s Preparing to unpack .../000-m4_1.4.19-7_ppc64el.deb ... 354s Unpacking m4 (1.4.19-7) ... 354s Selecting previously unselected package autoconf. 354s Preparing to unpack .../001-autoconf_2.72-3ubuntu1_all.deb ... 354s Unpacking autoconf (2.72-3ubuntu1) ... 354s Selecting previously unselected package autotools-dev. 354s Preparing to unpack .../002-autotools-dev_20240727.1_all.deb ... 354s Unpacking autotools-dev (20240727.1) ... 354s Selecting previously unselected package automake. 354s Preparing to unpack .../003-automake_1%3a1.17-3ubuntu1_all.deb ... 354s Unpacking automake (1:1.17-3ubuntu1) ... 354s Selecting previously unselected package libisl23:ppc64el. 354s Preparing to unpack .../004-libisl23_0.27-1_ppc64el.deb ... 354s Unpacking libisl23:ppc64el (0.27-1) ... 354s Selecting previously unselected package libmpc3:ppc64el. 354s Preparing to unpack .../005-libmpc3_1.3.1-1build2_ppc64el.deb ... 354s Unpacking libmpc3:ppc64el (1.3.1-1build2) ... 354s Selecting previously unselected package cpp-14-powerpc64le-linux-gnu. 354s Preparing to unpack .../006-cpp-14-powerpc64le-linux-gnu_14.2.0-19ubuntu2_ppc64el.deb ... 354s Unpacking cpp-14-powerpc64le-linux-gnu (14.2.0-19ubuntu2) ... 354s Selecting previously unselected package cpp-14. 354s Preparing to unpack .../007-cpp-14_14.2.0-19ubuntu2_ppc64el.deb ... 354s Unpacking cpp-14 (14.2.0-19ubuntu2) ... 354s Selecting previously unselected package fonts-dejavu-mono. 354s Preparing to unpack .../008-fonts-dejavu-mono_2.37-8_all.deb ... 354s Unpacking fonts-dejavu-mono (2.37-8) ... 354s Selecting previously unselected package fonts-dejavu-core. 354s Preparing to unpack .../009-fonts-dejavu-core_2.37-8_all.deb ... 354s Unpacking fonts-dejavu-core (2.37-8) ... 354s Selecting previously unselected package fontconfig-config. 354s Preparing to unpack .../010-fontconfig-config_2.15.0-2.2ubuntu1_ppc64el.deb ... 355s Unpacking fontconfig-config (2.15.0-2.2ubuntu1) ... 355s Selecting previously unselected package libcc1-0:ppc64el. 355s Preparing to unpack .../011-libcc1-0_15-20250404-0ubuntu1_ppc64el.deb ... 355s Unpacking libcc1-0:ppc64el (15-20250404-0ubuntu1) ... 355s Selecting previously unselected package libgomp1:ppc64el. 355s Preparing to unpack .../012-libgomp1_15-20250404-0ubuntu1_ppc64el.deb ... 355s Unpacking libgomp1:ppc64el (15-20250404-0ubuntu1) ... 355s Selecting previously unselected package libitm1:ppc64el. 355s Preparing to unpack .../013-libitm1_15-20250404-0ubuntu1_ppc64el.deb ... 355s Unpacking libitm1:ppc64el (15-20250404-0ubuntu1) ... 355s Selecting previously unselected package libasan8:ppc64el. 355s Preparing to unpack .../014-libasan8_15-20250404-0ubuntu1_ppc64el.deb ... 355s Unpacking libasan8:ppc64el (15-20250404-0ubuntu1) ... 355s Selecting previously unselected package liblsan0:ppc64el. 355s Preparing to unpack .../015-liblsan0_15-20250404-0ubuntu1_ppc64el.deb ... 355s Unpacking liblsan0:ppc64el (15-20250404-0ubuntu1) ... 355s Selecting previously unselected package libtsan2:ppc64el. 355s Preparing to unpack .../016-libtsan2_15-20250404-0ubuntu1_ppc64el.deb ... 355s Unpacking libtsan2:ppc64el (15-20250404-0ubuntu1) ... 355s Selecting previously unselected package libubsan1:ppc64el. 355s Preparing to unpack .../017-libubsan1_15-20250404-0ubuntu1_ppc64el.deb ... 355s Unpacking libubsan1:ppc64el (15-20250404-0ubuntu1) ... 355s Selecting previously unselected package libquadmath0:ppc64el. 355s Preparing to unpack .../018-libquadmath0_15-20250404-0ubuntu1_ppc64el.deb ... 355s Unpacking libquadmath0:ppc64el (15-20250404-0ubuntu1) ... 355s Selecting previously unselected package libgcc-14-dev:ppc64el. 355s Preparing to unpack .../019-libgcc-14-dev_14.2.0-19ubuntu2_ppc64el.deb ... 355s Unpacking libgcc-14-dev:ppc64el (14.2.0-19ubuntu2) ... 355s Selecting previously unselected package gcc-14-powerpc64le-linux-gnu. 355s Preparing to unpack .../020-gcc-14-powerpc64le-linux-gnu_14.2.0-19ubuntu2_ppc64el.deb ... 355s Unpacking gcc-14-powerpc64le-linux-gnu (14.2.0-19ubuntu2) ... 355s Selecting previously unselected package gcc-14. 355s Preparing to unpack .../021-gcc-14_14.2.0-19ubuntu2_ppc64el.deb ... 355s Unpacking gcc-14 (14.2.0-19ubuntu2) ... 356s Selecting previously unselected package libgfortran5:ppc64el. 356s Preparing to unpack .../022-libgfortran5_15-20250404-0ubuntu1_ppc64el.deb ... 356s Unpacking libgfortran5:ppc64el (15-20250404-0ubuntu1) ... 356s Selecting previously unselected package libgfortran-14-dev:ppc64el. 356s Preparing to unpack .../023-libgfortran-14-dev_14.2.0-19ubuntu2_ppc64el.deb ... 356s Unpacking libgfortran-14-dev:ppc64el (14.2.0-19ubuntu2) ... 356s Selecting previously unselected package gfortran-14-powerpc64le-linux-gnu. 356s Preparing to unpack .../024-gfortran-14-powerpc64le-linux-gnu_14.2.0-19ubuntu2_ppc64el.deb ... 356s Unpacking gfortran-14-powerpc64le-linux-gnu (14.2.0-19ubuntu2) ... 356s Selecting previously unselected package gfortran-14. 356s Preparing to unpack .../025-gfortran-14_14.2.0-19ubuntu2_ppc64el.deb ... 356s Unpacking gfortran-14 (14.2.0-19ubuntu2) ... 356s Selecting previously unselected package libaec0:ppc64el. 356s Preparing to unpack .../026-libaec0_1.1.3-1_ppc64el.deb ... 356s Unpacking libaec0:ppc64el (1.1.3-1) ... 356s Selecting previously unselected package libllvm17t64:ppc64el. 356s Preparing to unpack .../027-libllvm17t64_1%3a17.0.6-21_ppc64el.deb ... 356s Unpacking libllvm17t64:ppc64el (1:17.0.6-21) ... 356s Selecting previously unselected package libamd-comgr2:ppc64el. 356s Preparing to unpack .../028-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3build2_ppc64el.deb ... 356s Unpacking libamd-comgr2:ppc64el (6.0+git20231212.4510c28+dfsg-3build2) ... 357s Selecting previously unselected package libhsakmt1:ppc64el. 357s Preparing to unpack .../029-libhsakmt1_5.7.0-1build1_ppc64el.deb ... 357s Unpacking libhsakmt1:ppc64el (5.7.0-1build1) ... 357s Selecting previously unselected package libhsa-runtime64-1. 357s Preparing to unpack .../030-libhsa-runtime64-1_5.7.1-2build1_ppc64el.deb ... 357s Unpacking libhsa-runtime64-1 (5.7.1-2build1) ... 357s Selecting previously unselected package libamdhip64-5. 357s Preparing to unpack .../031-libamdhip64-5_5.7.1-5.1_ppc64el.deb ... 357s Unpacking libamdhip64-5 (5.7.1-5.1) ... 357s Selecting previously unselected package libblas3:ppc64el. 357s Preparing to unpack .../032-libblas3_3.12.1-2_ppc64el.deb ... 357s Unpacking libblas3:ppc64el (3.12.1-2) ... 357s Selecting previously unselected package libfontconfig1:ppc64el. 357s Preparing to unpack .../033-libfontconfig1_2.15.0-2.2ubuntu1_ppc64el.deb ... 357s Unpacking libfontconfig1:ppc64el (2.15.0-2.2ubuntu1) ... 357s Selecting previously unselected package libpixman-1-0:ppc64el. 357s Preparing to unpack .../034-libpixman-1-0_0.44.0-3_ppc64el.deb ... 357s Unpacking libpixman-1-0:ppc64el (0.44.0-3) ... 357s Selecting previously unselected package libxcb-render0:ppc64el. 357s Preparing to unpack .../035-libxcb-render0_1.17.0-2_ppc64el.deb ... 357s Unpacking libxcb-render0:ppc64el (1.17.0-2) ... 357s Selecting previously unselected package libxcb-shm0:ppc64el. 357s Preparing to unpack .../036-libxcb-shm0_1.17.0-2_ppc64el.deb ... 357s Unpacking libxcb-shm0:ppc64el (1.17.0-2) ... 357s Selecting previously unselected package libxrender1:ppc64el. 357s Preparing to unpack .../037-libxrender1_1%3a0.9.10-1.1build1_ppc64el.deb ... 357s Unpacking libxrender1:ppc64el (1:0.9.10-1.1build1) ... 357s Selecting previously unselected package libcairo2:ppc64el. 357s Preparing to unpack .../038-libcairo2_1.18.4-1_ppc64el.deb ... 357s Unpacking libcairo2:ppc64el (1.18.4-1) ... 357s Selecting previously unselected package libdeflate0:ppc64el. 357s Preparing to unpack .../039-libdeflate0_1.23-2_ppc64el.deb ... 357s Unpacking libdeflate0:ppc64el (1.23-2) ... 357s Selecting previously unselected package libdouble-conversion3:ppc64el. 357s Preparing to unpack .../040-libdouble-conversion3_3.3.1-1_ppc64el.deb ... 357s Unpacking libdouble-conversion3:ppc64el (3.3.1-1) ... 357s Selecting previously unselected package libevent-2.1-7t64:ppc64el. 357s Preparing to unpack .../041-libevent-2.1-7t64_2.1.12-stable-10_ppc64el.deb ... 357s Unpacking libevent-2.1-7t64:ppc64el (2.1.12-stable-10) ... 357s Selecting previously unselected package libevent-extra-2.1-7t64:ppc64el. 357s Preparing to unpack .../042-libevent-extra-2.1-7t64_2.1.12-stable-10_ppc64el.deb ... 357s Unpacking libevent-extra-2.1-7t64:ppc64el (2.1.12-stable-10) ... 357s Selecting previously unselected package libevent-pthreads-2.1-7t64:ppc64el. 357s Preparing to unpack .../043-libevent-pthreads-2.1-7t64_2.1.12-stable-10_ppc64el.deb ... 357s Unpacking libevent-pthreads-2.1-7t64:ppc64el (2.1.12-stable-10) ... 357s Selecting previously unselected package libevent-openssl-2.1-7t64:ppc64el. 357s Preparing to unpack .../044-libevent-openssl-2.1-7t64_2.1.12-stable-10_ppc64el.deb ... 357s Unpacking libevent-openssl-2.1-7t64:ppc64el (2.1.12-stable-10) ... 357s Selecting previously unselected package libevent-dev. 357s Preparing to unpack .../045-libevent-dev_2.1.12-stable-10_ppc64el.deb ... 357s Unpacking libevent-dev (2.1.12-stable-10) ... 357s Selecting previously unselected package librdmacm1t64:ppc64el. 357s Preparing to unpack .../046-librdmacm1t64_56.0-4ubuntu1_ppc64el.deb ... 357s Unpacking librdmacm1t64:ppc64el (56.0-4ubuntu1) ... 357s Selecting previously unselected package libfabric1:ppc64el. 357s Preparing to unpack .../047-libfabric1_1.17.0-3.1_ppc64el.deb ... 357s Unpacking libfabric1:ppc64el (1.17.0-3.1) ... 357s Selecting previously unselected package libfftw3-double3:ppc64el. 357s Preparing to unpack .../048-libfftw3-double3_3.3.10-2fakesync1build1_ppc64el.deb ... 357s Unpacking libfftw3-double3:ppc64el (3.3.10-2fakesync1build1) ... 357s Selecting previously unselected package libwayland-server0:ppc64el. 357s Preparing to unpack .../049-libwayland-server0_1.23.1-3_ppc64el.deb ... 357s Unpacking libwayland-server0:ppc64el (1.23.1-3) ... 357s Selecting previously unselected package libx11-xcb1:ppc64el. 357s Preparing to unpack .../050-libx11-xcb1_2%3a1.8.10-2_ppc64el.deb ... 357s Unpacking libx11-xcb1:ppc64el (2:1.8.10-2) ... 358s Selecting previously unselected package libxcb-dri3-0:ppc64el. 358s Preparing to unpack .../051-libxcb-dri3-0_1.17.0-2_ppc64el.deb ... 358s Unpacking libxcb-dri3-0:ppc64el (1.17.0-2) ... 358s Selecting previously unselected package libxcb-present0:ppc64el. 358s Preparing to unpack .../052-libxcb-present0_1.17.0-2_ppc64el.deb ... 358s Unpacking libxcb-present0:ppc64el (1.17.0-2) ... 358s Selecting previously unselected package libxcb-randr0:ppc64el. 358s Preparing to unpack .../053-libxcb-randr0_1.17.0-2_ppc64el.deb ... 358s Unpacking libxcb-randr0:ppc64el (1.17.0-2) ... 358s Selecting previously unselected package libxcb-sync1:ppc64el. 358s Preparing to unpack .../054-libxcb-sync1_1.17.0-2_ppc64el.deb ... 358s Unpacking libxcb-sync1:ppc64el (1.17.0-2) ... 358s Selecting previously unselected package libxcb-xfixes0:ppc64el. 358s Preparing to unpack .../055-libxcb-xfixes0_1.17.0-2_ppc64el.deb ... 358s Unpacking libxcb-xfixes0:ppc64el (1.17.0-2) ... 358s Selecting previously unselected package libxshmfence1:ppc64el. 358s Preparing to unpack .../056-libxshmfence1_1.3.3-1_ppc64el.deb ... 358s Unpacking libxshmfence1:ppc64el (1.3.3-1) ... 358s Selecting previously unselected package mesa-libgallium:ppc64el. 358s Preparing to unpack .../057-mesa-libgallium_25.0.3-1ubuntu2_ppc64el.deb ... 358s Unpacking mesa-libgallium:ppc64el (25.0.3-1ubuntu2) ... 358s Selecting previously unselected package libgbm1:ppc64el. 358s Preparing to unpack .../058-libgbm1_25.0.3-1ubuntu2_ppc64el.deb ... 358s Unpacking libgbm1:ppc64el (25.0.3-1ubuntu2) ... 358s Selecting previously unselected package libvulkan1:ppc64el. 358s Preparing to unpack .../059-libvulkan1_1.4.309.0-1_ppc64el.deb ... 358s Unpacking libvulkan1:ppc64el (1.4.309.0-1) ... 358s Selecting previously unselected package libgl1-mesa-dri:ppc64el. 358s Preparing to unpack .../060-libgl1-mesa-dri_25.0.3-1ubuntu2_ppc64el.deb ... 358s Unpacking libgl1-mesa-dri:ppc64el (25.0.3-1ubuntu2) ... 358s Selecting previously unselected package libglvnd0:ppc64el. 358s Preparing to unpack .../061-libglvnd0_1.7.0-1build1_ppc64el.deb ... 358s Unpacking libglvnd0:ppc64el (1.7.0-1build1) ... 358s Selecting previously unselected package libxcb-glx0:ppc64el. 358s Preparing to unpack .../062-libxcb-glx0_1.17.0-2_ppc64el.deb ... 358s Unpacking libxcb-glx0:ppc64el (1.17.0-2) ... 358s Selecting previously unselected package libxxf86vm1:ppc64el. 358s Preparing to unpack .../063-libxxf86vm1_1%3a1.1.4-1build4_ppc64el.deb ... 358s Unpacking libxxf86vm1:ppc64el (1:1.1.4-1build4) ... 358s Selecting previously unselected package libglx-mesa0:ppc64el. 358s Preparing to unpack .../064-libglx-mesa0_25.0.3-1ubuntu2_ppc64el.deb ... 358s Unpacking libglx-mesa0:ppc64el (25.0.3-1ubuntu2) ... 358s Selecting previously unselected package libglx0:ppc64el. 358s Preparing to unpack .../065-libglx0_1.7.0-1build1_ppc64el.deb ... 358s Unpacking libglx0:ppc64el (1.7.0-1build1) ... 358s Selecting previously unselected package libgl1:ppc64el. 358s Preparing to unpack .../066-libgl1_1.7.0-1build1_ppc64el.deb ... 358s Unpacking libgl1:ppc64el (1.7.0-1build1) ... 358s Selecting previously unselected package libgl2ps1.4. 358s Preparing to unpack .../067-libgl2ps1.4_1.4.2+dfsg1-2build1_ppc64el.deb ... 358s Unpacking libgl2ps1.4 (1.4.2+dfsg1-2build1) ... 358s Selecting previously unselected package libglew2.2:ppc64el. 358s Preparing to unpack .../068-libglew2.2_2.2.0-4build1_ppc64el.deb ... 358s Unpacking libglew2.2:ppc64el (2.2.0-4build1) ... 358s Selecting previously unselected package libsz2:ppc64el. 358s Preparing to unpack .../069-libsz2_1.1.3-1_ppc64el.deb ... 358s Unpacking libsz2:ppc64el (1.1.3-1) ... 358s Selecting previously unselected package libhdf5-310:ppc64el. 358s Preparing to unpack .../070-libhdf5-310_1.14.5+repack-3_ppc64el.deb ... 358s Unpacking libhdf5-310:ppc64el (1.14.5+repack-3) ... 358s Selecting previously unselected package libhdf5-hl-310:ppc64el. 358s Preparing to unpack .../071-libhdf5-hl-310_1.14.5+repack-3_ppc64el.deb ... 358s Unpacking libhdf5-hl-310:ppc64el (1.14.5+repack-3) ... 358s Selecting previously unselected package libhwloc15:ppc64el. 358s Preparing to unpack .../072-libhwloc15_2.12.0-1_ppc64el.deb ... 358s Unpacking libhwloc15:ppc64el (2.12.0-1) ... 358s Selecting previously unselected package libjpeg-turbo8:ppc64el. 358s Preparing to unpack .../073-libjpeg-turbo8_2.1.5-3ubuntu2_ppc64el.deb ... 358s Unpacking libjpeg-turbo8:ppc64el (2.1.5-3ubuntu2) ... 358s Selecting previously unselected package libjpeg8:ppc64el. 358s Preparing to unpack .../074-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 358s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 358s Selecting previously unselected package libjs-jquery. 358s Preparing to unpack .../075-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 358s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 358s Selecting previously unselected package libjs-jquery-ui. 358s Preparing to unpack .../076-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 358s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 358s Selecting previously unselected package libjsoncpp26:ppc64el. 358s Preparing to unpack .../077-libjsoncpp26_1.9.6-3_ppc64el.deb ... 358s Unpacking libjsoncpp26:ppc64el (1.9.6-3) ... 358s Selecting previously unselected package libkim-api2:ppc64el. 359s Preparing to unpack .../078-libkim-api2_2.3.0-1ubuntu1_ppc64el.deb ... 359s Unpacking libkim-api2:ppc64el (2.3.0-1ubuntu1) ... 359s Selecting previously unselected package liblapack3:ppc64el. 359s Preparing to unpack .../079-liblapack3_3.12.1-2_ppc64el.deb ... 359s Unpacking liblapack3:ppc64el (3.12.1-2) ... 359s Selecting previously unselected package libnetcdf22:ppc64el. 359s Preparing to unpack .../080-libnetcdf22_1%3a4.9.3-1_ppc64el.deb ... 359s Unpacking libnetcdf22:ppc64el (1:4.9.3-1) ... 359s Selecting previously unselected package libmunge2:ppc64el. 359s Preparing to unpack .../081-libmunge2_0.5.16-1_ppc64el.deb ... 359s Unpacking libmunge2:ppc64el (0.5.16-1) ... 359s Selecting previously unselected package libpciaccess0:ppc64el. 359s Preparing to unpack .../082-libpciaccess0_0.17-3build1_ppc64el.deb ... 359s Unpacking libpciaccess0:ppc64el (0.17-3build1) ... 359s Selecting previously unselected package libxnvctrl0:ppc64el. 359s Preparing to unpack .../083-libxnvctrl0_510.47.03-0ubuntu4_ppc64el.deb ... 359s Unpacking libxnvctrl0:ppc64el (510.47.03-0ubuntu4) ... 359s Selecting previously unselected package ocl-icd-libopencl1:ppc64el. 359s Preparing to unpack .../084-ocl-icd-libopencl1_2.3.2-1build1_ppc64el.deb ... 359s Unpacking ocl-icd-libopencl1:ppc64el (2.3.2-1build1) ... 359s Selecting previously unselected package libhwloc-plugins:ppc64el. 359s Preparing to unpack .../085-libhwloc-plugins_2.12.0-1_ppc64el.deb ... 359s Unpacking libhwloc-plugins:ppc64el (2.12.0-1) ... 359s Selecting previously unselected package libpmix2t64:ppc64el. 359s Preparing to unpack .../086-libpmix2t64_5.0.6-5_ppc64el.deb ... 359s Unpacking libpmix2t64:ppc64el (5.0.6-5) ... 359s Selecting previously unselected package libibumad3:ppc64el. 359s Preparing to unpack .../087-libibumad3_56.0-4ubuntu1_ppc64el.deb ... 359s Unpacking libibumad3:ppc64el (56.0-4ubuntu1) ... 359s Selecting previously unselected package libibmad5:ppc64el. 359s Preparing to unpack .../088-libibmad5_56.0-4ubuntu1_ppc64el.deb ... 359s Unpacking libibmad5:ppc64el (56.0-4ubuntu1) ... 359s Selecting previously unselected package libucx0:ppc64el. 359s Preparing to unpack .../089-libucx0_1.18.1+ds-2_ppc64el.deb ... 359s Unpacking libucx0:ppc64el (1.18.1+ds-2) ... 359s Selecting previously unselected package libopenmpi40:ppc64el. 359s Preparing to unpack .../090-libopenmpi40_5.0.7-1_ppc64el.deb ... 359s Unpacking libopenmpi40:ppc64el (5.0.7-1) ... 359s Selecting previously unselected package libpnetcdf6:ppc64el. 359s Preparing to unpack .../091-libpnetcdf6_1.14.0-2_ppc64el.deb ... 359s Unpacking libpnetcdf6:ppc64el (1.14.0-2) ... 359s Selecting previously unselected package libvoro++1. 359s Preparing to unpack .../092-libvoro++1_0.5+revert-to-0.4.6+dfsg1-1_ppc64el.deb ... 359s Unpacking libvoro++1 (0.5+revert-to-0.4.6+dfsg1-1) ... 359s Selecting previously unselected package libogg0:ppc64el. 359s Preparing to unpack .../093-libogg0_1.3.5-3build1_ppc64el.deb ... 359s Unpacking libogg0:ppc64el (1.3.5-3build1) ... 359s Selecting previously unselected package libopengl0:ppc64el. 359s Preparing to unpack .../094-libopengl0_1.7.0-1build1_ppc64el.deb ... 359s Unpacking libopengl0:ppc64el (1.7.0-1build1) ... 359s Selecting previously unselected package proj-data. 359s Preparing to unpack .../095-proj-data_9.5.1-1_all.deb ... 359s Unpacking proj-data (9.5.1-1) ... 359s Selecting previously unselected package libjbig0:ppc64el. 359s Preparing to unpack .../096-libjbig0_2.1-6.1ubuntu2_ppc64el.deb ... 359s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu2) ... 359s Selecting previously unselected package liblerc4:ppc64el. 359s Preparing to unpack .../097-liblerc4_4.0.0+ds-5ubuntu1_ppc64el.deb ... 359s Unpacking liblerc4:ppc64el (4.0.0+ds-5ubuntu1) ... 359s Selecting previously unselected package libsharpyuv0:ppc64el. 359s Preparing to unpack .../098-libsharpyuv0_1.5.0-0.1_ppc64el.deb ... 359s Unpacking libsharpyuv0:ppc64el (1.5.0-0.1) ... 359s Selecting previously unselected package libwebp7:ppc64el. 359s Preparing to unpack .../099-libwebp7_1.5.0-0.1_ppc64el.deb ... 359s Unpacking libwebp7:ppc64el (1.5.0-0.1) ... 359s Selecting previously unselected package libtiff6:ppc64el. 359s Preparing to unpack .../100-libtiff6_4.7.0-3ubuntu1_ppc64el.deb ... 359s Unpacking libtiff6:ppc64el (4.7.0-3ubuntu1) ... 359s Selecting previously unselected package libproj25:ppc64el. 359s Preparing to unpack .../101-libproj25_9.5.1-1_ppc64el.deb ... 359s Unpacking libproj25:ppc64el (9.5.1-1) ... 359s Selecting previously unselected package libtbbbind-2-5:ppc64el. 359s Preparing to unpack .../102-libtbbbind-2-5_2022.0.0-2_ppc64el.deb ... 359s Unpacking libtbbbind-2-5:ppc64el (2022.0.0-2) ... 359s Selecting previously unselected package libtbbmalloc2:ppc64el. 359s Preparing to unpack .../103-libtbbmalloc2_2022.0.0-2_ppc64el.deb ... 359s Unpacking libtbbmalloc2:ppc64el (2022.0.0-2) ... 359s Selecting previously unselected package libtbb12:ppc64el. 359s Preparing to unpack .../104-libtbb12_2022.0.0-2_ppc64el.deb ... 359s Unpacking libtbb12:ppc64el (2022.0.0-2) ... 360s Selecting previously unselected package libtcl8.6:ppc64el. 360s Preparing to unpack .../105-libtcl8.6_8.6.16+dfsg-1_ppc64el.deb ... 360s Unpacking libtcl8.6:ppc64el (8.6.16+dfsg-1) ... 360s Selecting previously unselected package libtheoradec1:ppc64el. 360s Preparing to unpack .../106-libtheoradec1_1.2.0~alpha1+dfsg-6_ppc64el.deb ... 360s Unpacking libtheoradec1:ppc64el (1.2.0~alpha1+dfsg-6) ... 360s Selecting previously unselected package libtheoraenc1:ppc64el. 360s Preparing to unpack .../107-libtheoraenc1_1.2.0~alpha1+dfsg-6_ppc64el.deb ... 360s Unpacking libtheoraenc1:ppc64el (1.2.0~alpha1+dfsg-6) ... 360s Selecting previously unselected package libxft2:ppc64el. 360s Preparing to unpack .../108-libxft2_2.3.6-1build1_ppc64el.deb ... 360s Unpacking libxft2:ppc64el (2.3.6-1build1) ... 360s Selecting previously unselected package x11-common. 360s Preparing to unpack .../109-x11-common_1%3a7.7+23ubuntu4_all.deb ... 360s Unpacking x11-common (1:7.7+23ubuntu4) ... 360s Selecting previously unselected package libxss1:ppc64el. 360s Preparing to unpack .../110-libxss1_1%3a1.2.3-1build3_ppc64el.deb ... 360s Unpacking libxss1:ppc64el (1:1.2.3-1build3) ... 360s Selecting previously unselected package libtk8.6:ppc64el. 360s Preparing to unpack .../111-libtk8.6_8.6.16-1_ppc64el.deb ... 360s Unpacking libtk8.6:ppc64el (8.6.16-1) ... 360s Selecting previously unselected package libvtk9.3:ppc64el. 360s Preparing to unpack .../112-libvtk9.3_9.3.0+dfsg1-4ubuntu1_ppc64el.deb ... 360s Unpacking libvtk9.3:ppc64el (9.3.0+dfsg1-4ubuntu1) ... 361s Selecting previously unselected package liblammps0t64:ppc64el. 361s Preparing to unpack .../113-liblammps0t64_20240207+dfsg-3build3_ppc64el.deb ... 361s Unpacking liblammps0t64:ppc64el (20240207+dfsg-3build3) ... 361s Selecting previously unselected package openmpi-common. 361s Preparing to unpack .../114-openmpi-common_5.0.7-1_all.deb ... 361s Unpacking openmpi-common (5.0.7-1) ... 361s Selecting previously unselected package libnl-3-dev:ppc64el. 361s Preparing to unpack .../115-libnl-3-dev_3.7.0-2_ppc64el.deb ... 361s Unpacking libnl-3-dev:ppc64el (3.7.0-2) ... 361s Selecting previously unselected package libnl-route-3-dev:ppc64el. 361s Preparing to unpack .../116-libnl-route-3-dev_3.7.0-2_ppc64el.deb ... 361s Unpacking libnl-route-3-dev:ppc64el (3.7.0-2) ... 361s Selecting previously unselected package libibverbs-dev:ppc64el. 361s Preparing to unpack .../117-libibverbs-dev_56.0-4ubuntu1_ppc64el.deb ... 361s Unpacking libibverbs-dev:ppc64el (56.0-4ubuntu1) ... 361s Selecting previously unselected package libnuma-dev:ppc64el. 361s Preparing to unpack .../118-libnuma-dev_2.0.18-1build1_ppc64el.deb ... 361s Unpacking libnuma-dev:ppc64el (2.0.18-1build1) ... 361s Selecting previously unselected package libltdl7:ppc64el. 361s Preparing to unpack .../119-libltdl7_2.5.4-4_ppc64el.deb ... 361s Unpacking libltdl7:ppc64el (2.5.4-4) ... 361s Selecting previously unselected package libltdl-dev:ppc64el. 361s Preparing to unpack .../120-libltdl-dev_2.5.4-4_ppc64el.deb ... 361s Unpacking libltdl-dev:ppc64el (2.5.4-4) ... 361s Selecting previously unselected package libhwloc-dev:ppc64el. 361s Preparing to unpack .../121-libhwloc-dev_2.12.0-1_ppc64el.deb ... 361s Unpacking libhwloc-dev:ppc64el (2.12.0-1) ... 361s Selecting previously unselected package zlib1g-dev:ppc64el. 361s Preparing to unpack .../122-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_ppc64el.deb ... 361s Unpacking zlib1g-dev:ppc64el (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 361s Selecting previously unselected package libpmix-dev:ppc64el. 361s Preparing to unpack .../123-libpmix-dev_5.0.6-5_ppc64el.deb ... 361s Unpacking libpmix-dev:ppc64el (5.0.6-5) ... 361s Selecting previously unselected package openmpi-bin. 361s Preparing to unpack .../124-openmpi-bin_5.0.7-1_ppc64el.deb ... 361s Unpacking openmpi-bin (5.0.7-1) ... 361s Selecting previously unselected package libopenmpi-dev:ppc64el. 361s Preparing to unpack .../125-libopenmpi-dev_5.0.7-1_ppc64el.deb ... 361s Unpacking libopenmpi-dev:ppc64el (5.0.7-1) ... 361s Selecting previously unselected package mpi-default-dev. 361s Preparing to unpack .../126-mpi-default-dev_1.18_ppc64el.deb ... 361s Unpacking mpi-default-dev (1.18) ... 361s Selecting previously unselected package liblammps-dev. 361s Preparing to unpack .../127-liblammps-dev_20240207+dfsg-3build3_ppc64el.deb ... 361s Unpacking liblammps-dev (20240207+dfsg-3build3) ... 362s Selecting previously unselected package mpi-default-bin. 362s Preparing to unpack .../128-mpi-default-bin_1.18_ppc64el.deb ... 362s Unpacking mpi-default-bin (1.18) ... 362s Selecting previously unselected package python3-lammps. 362s Preparing to unpack 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(1.2.0~alpha1+dfsg-6) ... 362s Setting up autotools-dev (20240727.1) ... 362s Setting up libblas3:ppc64el (3.12.1-2) ... 362s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 362s Setting up libmunge2:ppc64el (0.5.16-1) ... 362s Setting up libllvm17t64:ppc64el (1:17.0.6-21) ... 362s Setting up libxcb-sync1:ppc64el (1.17.0-2) ... 362s Setting up libjsoncpp26:ppc64el (1.9.6-3) ... 362s Setting up libquadmath0:ppc64el (15-20250404-0ubuntu1) ... 362s Setting up fonts-dejavu-mono (2.37-8) ... 362s Setting up libhwloc15:ppc64el (2.12.0-1) ... 362s Setting up libmpc3:ppc64el (1.3.1-1build2) ... 362s Setting up libtcl8.6:ppc64el (8.6.16+dfsg-1) ... 362s Setting up fonts-dejavu-core (2.37-8) ... 362s Setting up libjpeg-turbo8:ppc64el (2.1.5-3ubuntu2) ... 362s Setting up libltdl7:ppc64el (2.5.4-4) ... 362s Setting up libfftw3-double3:ppc64el (3.3.10-2fakesync1build1) ... 362s Setting up libgfortran5:ppc64el (15-20250404-0ubuntu1) ... 362s Setting up libvulkan1:ppc64el (1.4.309.0-1) ... 362s Setting up autoconf (2.72-3ubuntu1) ... 362s Setting up libevent-extra-2.1-7t64:ppc64el (2.1.12-stable-10) ... 362s Setting up libwebp7:ppc64el (1.5.0-0.1) ... 362s Setting up libubsan1:ppc64el (15-20250404-0ubuntu1) ... 362s Setting up zlib1g-dev:ppc64el (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 362s Setting up libnl-3-dev:ppc64el (3.7.0-2) ... 362s Setting up ocl-icd-libopencl1:ppc64el (2.3.2-1build1) ... 362s Setting up libxshmfence1:ppc64el (1.3.3-1) ... 362s Setting up libxcb-randr0:ppc64el (1.17.0-2) ... 362s Setting up libasan8:ppc64el (15-20250404-0ubuntu1) ... 362s Setting up openmpi-common (5.0.7-1) ... 362s Setting up librdmacm1t64:ppc64el (56.0-4ubuntu1) ... 362s Setting up libamd-comgr2:ppc64el (6.0+git20231212.4510c28+dfsg-3build2) ... 362s Setting up libxss1:ppc64el (1:1.2.3-1build3) ... 362s Setting up libtsan2:ppc64el (15-20250404-0ubuntu1) ... 362s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 362s Setting up libisl23:ppc64el (0.27-1) ... 362s Setting up libvoro++1 (0.5+revert-to-0.4.6+dfsg1-1) ... 362s Setting up libcc1-0:ppc64el (15-20250404-0ubuntu1) ... 362s Setting up liblsan0:ppc64el (15-20250404-0ubuntu1) ... 362s Setting up libhsakmt1:ppc64el (5.7.0-1build1) ... 362s Setting up libsz2:ppc64el (1.1.3-1) ... 362s Setting up libitm1:ppc64el (15-20250404-0ubuntu1) ... 362s Setting up libjpeg8:ppc64el (8c-2ubuntu11) ... 362s Setting up automake (1:1.17-3ubuntu1) ... 362s update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode 362s Setting up libfabric1:ppc64el (1.17.0-3.1) ... 362s Setting up mesa-libgallium:ppc64el (25.0.3-1ubuntu2) ... 362s Setting up liblapack3:ppc64el (3.12.1-2) ... 362s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 362s Setting up libgbm1:ppc64el (25.0.3-1ubuntu2) ... 362s Setting up fontconfig-config (2.15.0-2.2ubuntu1) ... 362s Setting up libgl1-mesa-dri:ppc64el (25.0.3-1ubuntu2) ... 362s Setting up libkim-api2:ppc64el (2.3.0-1ubuntu1) ... 362s Setting up libhwloc-plugins:ppc64el (2.12.0-1) ... 362s Setting up libtbbbind-2-5:ppc64el (2022.0.0-2) ... 362s Setting up libnl-route-3-dev:ppc64el (3.7.0-2) ... 362s Setting up libltdl-dev:ppc64el (2.5.4-4) ... 362s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 362s Setting up libevent-dev (2.1.12-stable-10) ... 362s Setting up libpmix2t64:ppc64el (5.0.6-5) ... 362s Setting up cpp-14-powerpc64le-linux-gnu (14.2.0-19ubuntu2) ... 362s Setting up cpp-14 (14.2.0-19ubuntu2) ... 362s Setting up libhdf5-310:ppc64el (1.14.5+repack-3) ... 362s Setting up libtiff6:ppc64el (4.7.0-3ubuntu1) ... 362s Setting up libhsa-runtime64-1 (5.7.1-2build1) ... 362s Setting up libhwloc-dev:ppc64el (2.12.0-1) ... 362s Setting up libfontconfig1:ppc64el (2.15.0-2.2ubuntu1) ... 362s Setting up libgcc-14-dev:ppc64el (14.2.0-19ubuntu2) ... 362s Setting up libpmix-dev:ppc64el (5.0.6-5) ... 362s Setting up gcc-14-powerpc64le-linux-gnu (14.2.0-19ubuntu2) ... 362s Setting up libgfortran-14-dev:ppc64el (14.2.0-19ubuntu2) ... 362s Setting up libhdf5-hl-310:ppc64el (1.14.5+repack-3) ... 362s Setting up libxft2:ppc64el (2.3.6-1build1) ... 362s Setting up libglx-mesa0:ppc64el (25.0.3-1ubuntu2) ... 362s Setting up libglx0:ppc64el (1.7.0-1build1) ... 362s Setting up libproj25:ppc64el (9.5.1-1) ... 362s Setting up libtk8.6:ppc64el (8.6.16-1) ... 362s Setting up libnetcdf22:ppc64el (1:4.9.3-1) ... 362s Setting up libtbb12:ppc64el (2022.0.0-2) ... 362s Setting up libibverbs-dev:ppc64el (56.0-4ubuntu1) ... 362s Setting up libcairo2:ppc64el (1.18.4-1) ... 362s Setting up gcc-14 (14.2.0-19ubuntu2) ... 362s Setting up libgl1:ppc64el (1.7.0-1build1) ... 362s Setting up libamdhip64-5 (5.7.1-5.1) ... 362s Setting up libtheoradec1:ppc64el (1.2.0~alpha1+dfsg-6) ... 362s Setting up libglew2.2:ppc64el (2.2.0-4build1) ... 362s Setting up gfortran-14-powerpc64le-linux-gnu (14.2.0-19ubuntu2) ... 362s Setting up gfortran-14 (14.2.0-19ubuntu2) ... 362s Setting up libucx0:ppc64el (1.18.1+ds-2) ... 362s Setting up libgl2ps1.4 (1.4.2+dfsg1-2build1) ... 362s Setting up libopenmpi40:ppc64el (5.0.7-1) ... 362s Setting up libpnetcdf6:ppc64el (1.14.0-2) ... 362s Setting up libvtk9.3:ppc64el (9.3.0+dfsg1-4ubuntu1) ... 362s Setting up openmpi-bin (5.0.7-1) ... 362s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 362s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 362s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 362s Setting up mpi-default-bin (1.18) ... 362s Setting up liblammps0t64:ppc64el (20240207+dfsg-3build3) ... 362s Setting up libopenmpi-dev:ppc64el (5.0.7-1) ... 362s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/openmpi/include to provide /usr/include/powerpc64le-linux-gnu/mpi (mpi-powerpc64le-linux-gnu) in auto mode 362s Setting up mpi-default-dev (1.18) ... 362s Setting up liblammps-dev (20240207+dfsg-3build3) ... 362s Setting up python3-lammps (20240207+dfsg-3build3) ... 363s Processing triggers for man-db (2.13.0-1) ... 363s Processing triggers for install-info (7.1.1-1) ... 364s Processing triggers for libc-bin (2.41-6ubuntu1) ... 423s autopkgtest [08:59:09]: test command1: cd python/examples; python3 demo.py 423s autopkgtest [08:59:09]: test command1: [----------------------- 423s LAMMPS (7 Feb 2024 - Update 1) 423s 423s Python output: 423s Natoms, mass, x[0][0] coord = 4000 1.0 16.651271530416228 423s Temperature from compute = 0.7683848148006238 423s Energy from equal-style variable = -5.774392400140566 423s Velocity component from atom-style variable = -0.1669643026996425 423s Volume from get_thermo = 4738.213693437576 423s Natoms from get_natoms = 4000 423s Global coords from gather_atoms = 16.651271530416228 16.790010773016775 0.19047524160174037 423s Changed x[0][0] via scatter_atoms = 17.651271530416228 423s OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:98) 423s using 1 OpenMP thread(s) per MPI task 423s Lattice spacing in x,y,z = 1.6795962 1.6795962 1.6795962 423s Created orthogonal box = (0 0 0) to (16.795962 16.795962 16.795962) 423s 1 by 1 by 1 MPI processor grid 423s Created 4000 atoms 423s using lattice units in orthogonal box = (0 0 0) to (16.795962 16.795962 16.795962) 423s create_atoms CPU = 0.001 seconds 423s Generated 0 of 0 mixed pair_coeff terms from geometric mixing rule 423s Neighbor list info ... 423s update: every = 20 steps, delay = 0 steps, check = no 423s max neighbors/atom: 2000, page size: 100000 423s master list distance cutoff = 2.8 423s ghost atom cutoff = 2.8 423s binsize = 1.4, bins = 12 12 12 423s 1 neighbor lists, perpetual/occasional/extra = 1 0 0 423s (1) pair lj/cut, perpetual 423s attributes: half, newton on 423s pair build: half/bin/atomonly/newton 423s stencil: half/bin/3d 423s bin: standard 423s Setting up Verlet run ... 423s Unit style : lj 423s Current step : 0 423s Time step : 0.005 423s Per MPI rank memory allocation (min/avg/max) = 3.763 | 3.763 | 3.763 Mbytes 423s Step Temp E_pair E_mol TotEng Press 423s 0 1.44 -6.7733681 0 -4.6139081 -5.0199732 423s 100 0.76838481 -5.7743924 0 -4.6221033 0.13682061 423s Loop time of 0.306867 on 1 procs for 100 steps with 4000 atoms 423s 423s Performance: 140777.487 tau/day, 325.874 timesteps/s, 1.303 Matom-step/s 423s 99.8% CPU use with 1 MPI tasks x 1 OpenMP threads 423s 423s MPI task timing breakdown: 423s Section | min time | avg time | max time |%varavg| %total 423s --------------------------------------------------------------- 423s Pair | 0.25979 | 0.25979 | 0.25979 | 0.0 | 84.66 423s Neigh | 0.038065 | 0.038065 | 0.038065 | 0.0 | 12.40 423s Comm | 0.0039748 | 0.0039748 | 0.0039748 | 0.0 | 1.30 423s Output | 6.9114e-05 | 6.9114e-05 | 6.9114e-05 | 0.0 | 0.02 423s Modify | 0.0043154 | 0.0043154 | 0.0043154 | 0.0 | 1.41 423s Other | | 0.0006538 | | | 0.21 423s 423s Nlocal: 4000 ave 4000 max 4000 min 423s Histogram: 1 0 0 0 0 0 0 0 0 0 423s Nghost: 5758 ave 5758 max 5758 min 423s Histogram: 1 0 0 0 0 0 0 0 0 0 423s Neighs: 150488 ave 150488 max 150488 min 423s Histogram: 1 0 0 0 0 0 0 0 0 0 423s 423s Total # of neighbors = 150488 423s Ave neighs/atom = 37.622 423s Neighbor list builds = 5 423s Dangerous builds not checked 423s Total wall time: 0:00:00 424s autopkgtest [08:59:10]: test command1: -----------------------] 424s command1 PASS 424s autopkgtest [08:59:10]: test command1: - - - - - - - - - - results - - - - - - - - - - 425s autopkgtest [08:59:11]: @@@@@@@@@@@@@@@@@@@@ summary 425s crack PASS 425s dipole PASS 425s ellipse PASS 425s flow PASS 425s friction PASS 425s hugo PASS 425s command1 PASS 430s nova [W] Using flock in prodstack6-ppc64el 430s Creating nova instance adt-questing-ppc64el-lammps-20250504-085206-juju-7f2275-prod-proposed-migration-environment-2-7ca75e9f-3e7a-4e03-a430-f89538fb08ed from image adt/ubuntu-questing-ppc64el-server-20250504.img (UUID 65e029e2-4bd9-4b30-b646-f26a73cdeb97)... 430s nova [W] Timed out waiting for 3bbabb17-340c-4188-92f8-c8929a5d9aac to get deleted. 430s nova [W] Using flock in prodstack6-ppc64el 430s Creating nova instance adt-questing-ppc64el-lammps-20250504-085206-juju-7f2275-prod-proposed-migration-environment-2-7ca75e9f-3e7a-4e03-a430-f89538fb08ed from image adt/ubuntu-questing-ppc64el-server-20250504.img (UUID 65e029e2-4bd9-4b30-b646-f26a73cdeb97)... 430s nova [W] Timed out waiting for fdae7164-638c-4e38-a3bd-489d92193160 to get deleted.