0s autopkgtest [15:51:25]: starting date and time: 2025-05-03 15:51:25+0000 0s autopkgtest [15:51:25]: git checkout: 9986aa8c Merge branch 'skia/fix_network_interface' into 'ubuntu/production' 0s autopkgtest [15:51:25]: host juju-7f2275-prod-proposed-migration-environment-21; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ktevg8_7/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:setuptools --apt-upgrade kleborate --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=setuptools/78.1.0-1.2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-ppc64el --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-21@sto01-ppc64el-8.secgroup --name adt-questing-ppc64el-kleborate-20250503-155125-juju-7f2275-prod-proposed-migration-environment-21-7d482e6f-3f2a-4bbe-80a6-ff97d214b930 --image adt/ubuntu-questing-ppc64el-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-21 --net-id=net_prod-autopkgtest-workers-ppc64el -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 72s autopkgtest [15:52:37]: testbed dpkg architecture: ppc64el 72s autopkgtest [15:52:37]: testbed apt version: 3.0.0 73s autopkgtest [15:52:38]: @@@@@@@@@@@@@@@@@@@@ test bed setup 73s autopkgtest [15:52:38]: testbed release detected to be: None 74s autopkgtest [15:52:39]: updating testbed package index (apt update) 74s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB] 74s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 74s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 74s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 74s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [150 kB] 74s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [1538 kB] 74s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [33.5 kB] 74s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main ppc64el Packages [187 kB] 74s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe ppc64el Packages [1378 kB] 74s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse ppc64el Packages [30.1 kB] 75s Fetched 3427 kB in 1s (4201 kB/s) 75s Reading package lists... 76s autopkgtest [15:52:41]: upgrading testbed (apt dist-upgrade and autopurge) 76s Reading package lists... 77s Building dependency tree... 77s Reading state information... 77s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 77s Starting 2 pkgProblemResolver with broken count: 0 77s Done 77s Entering ResolveByKeep 77s 77s Calculating upgrade... 77s The following packages will be upgraded: 77s libperl5.40 perl perl-base perl-modules-5.40 python3-pkg-resources 77s python3-setuptools 78s 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 78s Need to get 11.2 MB of archives. 78s After this operation, 42.0 kB of additional disk space will be used. 78s Get:1 http://ftpmaster.internal/ubuntu questing-proposed/main ppc64el libperl5.40 ppc64el 5.40.1-3 [4949 kB] 78s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main ppc64el perl ppc64el 5.40.1-3 [262 kB] 78s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main ppc64el perl-base ppc64el 5.40.1-3 [1923 kB] 78s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main ppc64el perl-modules-5.40 all 5.40.1-3 [3217 kB] 78s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main ppc64el python3-pkg-resources all 78.1.0-1.2 [144 kB] 78s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main ppc64el python3-setuptools all 78.1.0-1.2 [660 kB] 78s Fetched 11.2 MB in 1s (22.2 MB/s) 79s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78697 files and directories currently installed.) 79s Preparing to unpack .../libperl5.40_5.40.1-3_ppc64el.deb ... 79s Unpacking libperl5.40:ppc64el (5.40.1-3) over (5.40.1-2ubuntu0.1) ... 79s Preparing to unpack .../perl_5.40.1-3_ppc64el.deb ... 79s Unpacking perl (5.40.1-3) over (5.40.1-2ubuntu0.1) ... 79s Preparing to unpack .../perl-base_5.40.1-3_ppc64el.deb ... 79s Unpacking perl-base (5.40.1-3) over (5.40.1-2ubuntu0.1) ... 80s Setting up perl-base (5.40.1-3) ... 80s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78697 files and directories currently installed.) 80s Preparing to unpack .../perl-modules-5.40_5.40.1-3_all.deb ... 80s Unpacking perl-modules-5.40 (5.40.1-3) over (5.40.1-2ubuntu0.1) ... 81s Preparing to unpack .../python3-pkg-resources_78.1.0-1.2_all.deb ... 81s Unpacking python3-pkg-resources (78.1.0-1.2) over (75.8.0-1) ... 81s Preparing to unpack .../python3-setuptools_78.1.0-1.2_all.deb ... 81s Unpacking python3-setuptools (78.1.0-1.2) over (75.8.0-1) ... 81s Setting up python3-pkg-resources (78.1.0-1.2) ... 81s Setting up python3-setuptools (78.1.0-1.2) ... 82s Setting up perl-modules-5.40 (5.40.1-3) ... 82s Setting up libperl5.40:ppc64el (5.40.1-3) ... 82s Setting up perl (5.40.1-3) ... 82s Processing triggers for man-db (2.13.0-1) ... 84s Processing triggers for libc-bin (2.41-6ubuntu1) ... 84s Reading package lists... 84s Building dependency tree... 84s Reading state information... 84s Starting pkgProblemResolver with broken count: 0 84s Starting 2 pkgProblemResolver with broken count: 0 84s Done 85s Solving dependencies... 85s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 87s autopkgtest [15:52:52]: testbed running kernel: Linux 6.14.0-15-generic #15-Ubuntu SMP Sun Apr 6 14:52:42 UTC 2025 87s autopkgtest [15:52:52]: @@@@@@@@@@@@@@@@@@@@ apt-source kleborate 91s Get:1 http://ftpmaster.internal/ubuntu questing/universe kleborate 2.4.1-4 (dsc) [2212 B] 91s Get:2 http://ftpmaster.internal/ubuntu questing/universe kleborate 2.4.1-4 (tar) [91.6 MB] 91s Get:3 http://ftpmaster.internal/ubuntu questing/universe kleborate 2.4.1-4 (diff) [5997 kB] 91s gpgv: Signature made Sun Feb 16 22:29:32 2025 UTC 91s gpgv: using RSA key 8F6DE104377F3B11E741748731F3144544A1741A 91s gpgv: issuer "tchet@debian.org" 91s gpgv: Can't check signature: No public key 91s dpkg-source: warning: cannot verify inline signature for ./kleborate_2.4.1-4.dsc: no acceptable signature found 93s autopkgtest [15:52:58]: testing package kleborate version 2.4.1-4 94s autopkgtest [15:52:59]: build not needed 101s autopkgtest [15:53:06]: test run-unit-test: preparing testbed 101s Reading package lists... 101s Building dependency tree... 101s Reading state information... 101s Starting pkgProblemResolver with broken count: 0 101s Starting 2 pkgProblemResolver with broken count: 0 101s Done 101s The following NEW packages will be installed: 101s fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-urw-base35 101s kaptive kaptive-data kleborate kleborate-examples libblas3 libcairo2 101s libcapnp-1.1.0 libdeflate0 libfontconfig1 libfontenc1 libgfortran5 libgomp1 101s libgraphite2-3 libgsl28 libgslcblas0 libharfbuzz0b libimagequant0 libjbig0 101s libjpeg-turbo8 libjpeg8 liblapack3 liblcms2-2 liblerc4 libmbedcrypto16 101s libmbedtls21 libmbedx509-7 libmurmurhash2 libopenjp2-7 libpixman-1-0 101s libraqm0 libsharpyuv0 libtiff6 libwebp7 libwebpdemux2 libwebpmux3 101s libxcb-render0 libxcb-shm0 libxrender1 mash ncbi-blast+ ncbi-data 101s python3-biopython python3-cairo python3-freetype python3-numpy 101s python3-numpy-dev python3-pil python3-reportlab python3-rlpycairo sgml-base 101s w3c-sgml-lib x11-common xfonts-encodings xfonts-utils xml-core 101s 0 upgraded, 59 newly installed, 0 to remove and 0 not upgraded. 101s Need to get 73.5 MB of archives. 101s After this operation, 299 MB of additional disk space will be used. 101s Get:1 http://ftpmaster.internal/ubuntu questing/main ppc64el python3-numpy-dev ppc64el 1:2.2.3+ds-5 [154 kB] 101s Get:2 http://ftpmaster.internal/ubuntu questing/main ppc64el libblas3 ppc64el 3.12.1-2 [239 kB] 102s Get:3 http://ftpmaster.internal/ubuntu questing/main ppc64el libgfortran5 ppc64el 15-20250404-0ubuntu1 [615 kB] 102s Get:4 http://ftpmaster.internal/ubuntu questing/main ppc64el liblapack3 ppc64el 3.12.1-2 [2813 kB] 102s Get:5 http://ftpmaster.internal/ubuntu questing/main ppc64el python3-numpy ppc64el 1:2.2.3+ds-5 [4835 kB] 102s Get:6 http://ftpmaster.internal/ubuntu questing/main ppc64el sgml-base all 1.31 [11.4 kB] 102s Get:7 http://ftpmaster.internal/ubuntu questing/main ppc64el fonts-dejavu-mono all 2.37-8 [502 kB] 102s Get:8 http://ftpmaster.internal/ubuntu questing/main ppc64el fonts-dejavu-core all 2.37-8 [835 kB] 102s Get:9 http://ftpmaster.internal/ubuntu questing/main ppc64el libfontenc1 ppc64el 1:1.1.8-1build1 [15.8 kB] 102s Get:10 http://ftpmaster.internal/ubuntu questing/main ppc64el x11-common all 1:7.7+23ubuntu4 [21.8 kB] 102s Get:11 http://ftpmaster.internal/ubuntu questing/main ppc64el xfonts-encodings all 1:1.0.5-0ubuntu2 [578 kB] 102s Get:12 http://ftpmaster.internal/ubuntu questing/main ppc64el xfonts-utils ppc64el 1:7.7+7 [114 kB] 102s Get:13 http://ftpmaster.internal/ubuntu questing/main ppc64el fonts-urw-base35 all 20200910-8 [11.0 MB] 102s Get:14 http://ftpmaster.internal/ubuntu questing/main ppc64el fontconfig-config ppc64el 2.15.0-2.2ubuntu1 [37.9 kB] 102s Get:15 http://ftpmaster.internal/ubuntu questing/main ppc64el libgomp1 ppc64el 15-20250404-0ubuntu1 [168 kB] 102s Get:16 http://ftpmaster.internal/ubuntu questing/main ppc64el libimagequant0 ppc64el 2.18.0-1build1 [43.2 kB] 102s Get:17 http://ftpmaster.internal/ubuntu questing/main ppc64el libjpeg-turbo8 ppc64el 2.1.5-3ubuntu2 [215 kB] 102s Get:18 http://ftpmaster.internal/ubuntu questing/main ppc64el libjpeg8 ppc64el 8c-2ubuntu11 [2148 B] 102s Get:19 http://ftpmaster.internal/ubuntu questing/main ppc64el liblcms2-2 ppc64el 2.16-2 [243 kB] 102s Get:20 http://ftpmaster.internal/ubuntu questing/main ppc64el libopenjp2-7 ppc64el 2.5.3-2 [248 kB] 102s Get:21 http://ftpmaster.internal/ubuntu questing/main ppc64el libgraphite2-3 ppc64el 1.3.14-2ubuntu1 [84.6 kB] 102s Get:22 http://ftpmaster.internal/ubuntu questing/main ppc64el libharfbuzz0b ppc64el 10.2.0-1 [598 kB] 102s Get:23 http://ftpmaster.internal/ubuntu questing/main ppc64el libraqm0 ppc64el 0.10.2-1 [19.2 kB] 102s Get:24 http://ftpmaster.internal/ubuntu questing/main ppc64el libdeflate0 ppc64el 1.23-2 [63.3 kB] 102s Get:25 http://ftpmaster.internal/ubuntu questing/main ppc64el libjbig0 ppc64el 2.1-6.1ubuntu2 [35.9 kB] 102s Get:26 http://ftpmaster.internal/ubuntu questing/main ppc64el liblerc4 ppc64el 4.0.0+ds-5ubuntu1 [298 kB] 102s Get:27 http://ftpmaster.internal/ubuntu questing/main ppc64el libsharpyuv0 ppc64el 1.5.0-0.1 [22.3 kB] 102s Get:28 http://ftpmaster.internal/ubuntu questing/main ppc64el libwebp7 ppc64el 1.5.0-0.1 [315 kB] 102s Get:29 http://ftpmaster.internal/ubuntu questing/main ppc64el libtiff6 ppc64el 4.7.0-3ubuntu1 [283 kB] 102s Get:30 http://ftpmaster.internal/ubuntu questing/main ppc64el libwebpdemux2 ppc64el 1.5.0-0.1 [14.6 kB] 102s Get:31 http://ftpmaster.internal/ubuntu questing/main ppc64el libwebpmux3 ppc64el 1.5.0-0.1 [31.1 kB] 102s Get:32 http://ftpmaster.internal/ubuntu questing/main ppc64el python3-pil ppc64el 11.1.0-5build1 [601 kB] 102s Get:33 http://ftpmaster.internal/ubuntu questing/main ppc64el libfontconfig1 ppc64el 2.15.0-2.2ubuntu1 [187 kB] 102s Get:34 http://ftpmaster.internal/ubuntu questing/main ppc64el libpixman-1-0 ppc64el 0.44.0-3 [334 kB] 102s Get:35 http://ftpmaster.internal/ubuntu questing/main ppc64el libxcb-render0 ppc64el 1.17.0-2 [17.2 kB] 102s Get:36 http://ftpmaster.internal/ubuntu questing/main ppc64el libxcb-shm0 ppc64el 1.17.0-2 [5980 B] 102s Get:37 http://ftpmaster.internal/ubuntu questing/main ppc64el libxrender1 ppc64el 1:0.9.10-1.1build1 [23.1 kB] 102s Get:38 http://ftpmaster.internal/ubuntu questing/main ppc64el libcairo2 ppc64el 1.18.4-1 [746 kB] 102s Get:39 http://ftpmaster.internal/ubuntu questing/main ppc64el python3-cairo ppc64el 1.27.0-2 [129 kB] 102s Get:40 http://ftpmaster.internal/ubuntu questing/universe ppc64el python3-freetype all 2.5.1-1 [92.3 kB] 102s Get:41 http://ftpmaster.internal/ubuntu questing/universe ppc64el python3-rlpycairo all 0.3.0-3 [9130 B] 102s Get:42 http://ftpmaster.internal/ubuntu questing/universe ppc64el python3-reportlab all 4.3.1-1 [1137 kB] 102s Get:43 http://ftpmaster.internal/ubuntu questing/main ppc64el xml-core all 0.19 [20.3 kB] 102s Get:44 http://ftpmaster.internal/ubuntu questing/universe ppc64el w3c-sgml-lib all 1.3-3 [280 kB] 102s Get:45 http://ftpmaster.internal/ubuntu questing/universe ppc64el python3-biopython ppc64el 1.85+dfsg-2build1 [1766 kB] 103s Get:46 http://ftpmaster.internal/ubuntu questing/universe ppc64el ncbi-data all 6.1.20170106+dfsg2-5 [3966 kB] 103s Get:47 http://ftpmaster.internal/ubuntu questing/universe ppc64el libmbedcrypto16 ppc64el 3.6.2-3ubuntu1 [293 kB] 103s Get:48 http://ftpmaster.internal/ubuntu questing/universe ppc64el libmbedx509-7 ppc64el 3.6.2-3ubuntu1 [40.1 kB] 103s Get:49 http://ftpmaster.internal/ubuntu questing/universe ppc64el libmbedtls21 ppc64el 3.6.2-3ubuntu1 [135 kB] 103s Get:50 http://ftpmaster.internal/ubuntu questing/universe ppc64el ncbi-blast+ ppc64el 2.16.0+ds-6build1 [16.1 MB] 103s Get:51 http://ftpmaster.internal/ubuntu questing/universe ppc64el kaptive all 2.0.8-1 [28.1 kB] 103s Get:52 http://ftpmaster.internal/ubuntu questing/universe ppc64el kaptive-data all 2.0.8-1 [5432 kB] 103s Get:53 http://ftpmaster.internal/ubuntu questing/universe ppc64el libcapnp-1.1.0 ppc64el 1.1.0-2 [1576 kB] 103s Get:54 http://ftpmaster.internal/ubuntu questing/universe ppc64el libgslcblas0 ppc64el 2.8+dfsg-5ubuntu1 [93.2 kB] 103s Get:55 http://ftpmaster.internal/ubuntu questing/universe ppc64el libgsl28 ppc64el 2.8+dfsg-5ubuntu1 [1130 kB] 103s Get:56 http://ftpmaster.internal/ubuntu questing/universe ppc64el libmurmurhash2 ppc64el 1.6-1 [6626 B] 103s Get:57 http://ftpmaster.internal/ubuntu questing/universe ppc64el mash ppc64el 2.3+dfsg-6build2 [163 kB] 103s Get:58 http://ftpmaster.internal/ubuntu questing/universe ppc64el kleborate ppc64el 2.4.1-4 [8750 kB] 104s Get:59 http://ftpmaster.internal/ubuntu questing/universe ppc64el kleborate-examples all 2.4.1-4 [5990 kB] 104s Fetched 73.5 MB in 2s (33.0 MB/s) 104s Selecting previously unselected package python3-numpy-dev:ppc64el. 104s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 78711 files and directories currently installed.) 104s Preparing to unpack .../00-python3-numpy-dev_1%3a2.2.3+ds-5_ppc64el.deb ... 104s Unpacking python3-numpy-dev:ppc64el (1:2.2.3+ds-5) ... 104s Selecting previously unselected package libblas3:ppc64el. 104s Preparing to unpack .../01-libblas3_3.12.1-2_ppc64el.deb ... 104s Unpacking libblas3:ppc64el (3.12.1-2) ... 104s Selecting previously unselected package libgfortran5:ppc64el. 104s Preparing to unpack .../02-libgfortran5_15-20250404-0ubuntu1_ppc64el.deb ... 104s Unpacking libgfortran5:ppc64el (15-20250404-0ubuntu1) ... 104s Selecting previously unselected package liblapack3:ppc64el. 104s Preparing to unpack .../03-liblapack3_3.12.1-2_ppc64el.deb ... 104s Unpacking liblapack3:ppc64el (3.12.1-2) ... 104s Selecting previously unselected package python3-numpy. 104s Preparing to unpack .../04-python3-numpy_1%3a2.2.3+ds-5_ppc64el.deb ... 104s Unpacking python3-numpy (1:2.2.3+ds-5) ... 104s Selecting previously unselected package sgml-base. 104s Preparing to unpack .../05-sgml-base_1.31_all.deb ... 104s Unpacking sgml-base (1.31) ... 105s Selecting previously unselected package fonts-dejavu-mono. 105s Preparing to unpack .../06-fonts-dejavu-mono_2.37-8_all.deb ... 105s Unpacking fonts-dejavu-mono (2.37-8) ... 105s Selecting previously unselected package fonts-dejavu-core. 105s Preparing to unpack .../07-fonts-dejavu-core_2.37-8_all.deb ... 105s Unpacking fonts-dejavu-core (2.37-8) ... 105s Selecting previously unselected package libfontenc1:ppc64el. 105s Preparing to unpack .../08-libfontenc1_1%3a1.1.8-1build1_ppc64el.deb ... 105s Unpacking libfontenc1:ppc64el (1:1.1.8-1build1) ... 105s Selecting previously unselected package x11-common. 105s Preparing to unpack .../09-x11-common_1%3a7.7+23ubuntu4_all.deb ... 105s Unpacking x11-common (1:7.7+23ubuntu4) ... 105s Selecting previously unselected package xfonts-encodings. 105s Preparing to unpack .../10-xfonts-encodings_1%3a1.0.5-0ubuntu2_all.deb ... 105s Unpacking xfonts-encodings (1:1.0.5-0ubuntu2) ... 105s Selecting previously unselected package xfonts-utils. 105s Preparing to unpack .../11-xfonts-utils_1%3a7.7+7_ppc64el.deb ... 105s Unpacking xfonts-utils (1:7.7+7) ... 105s Selecting previously unselected package fonts-urw-base35. 105s Preparing to unpack .../12-fonts-urw-base35_20200910-8_all.deb ... 105s Unpacking fonts-urw-base35 (20200910-8) ... 105s Selecting previously unselected package fontconfig-config. 105s Preparing to unpack .../13-fontconfig-config_2.15.0-2.2ubuntu1_ppc64el.deb ... 105s Unpacking fontconfig-config (2.15.0-2.2ubuntu1) ... 105s Selecting previously unselected package libgomp1:ppc64el. 105s Preparing to unpack .../14-libgomp1_15-20250404-0ubuntu1_ppc64el.deb ... 105s Unpacking libgomp1:ppc64el (15-20250404-0ubuntu1) ... 106s Selecting previously unselected package libimagequant0:ppc64el. 106s Preparing to unpack .../15-libimagequant0_2.18.0-1build1_ppc64el.deb ... 106s Unpacking libimagequant0:ppc64el (2.18.0-1build1) ... 106s Selecting previously unselected package libjpeg-turbo8:ppc64el. 106s Preparing to unpack .../16-libjpeg-turbo8_2.1.5-3ubuntu2_ppc64el.deb ... 106s Unpacking libjpeg-turbo8:ppc64el (2.1.5-3ubuntu2) ... 106s Selecting previously unselected package libjpeg8:ppc64el. 106s Preparing to unpack .../17-libjpeg8_8c-2ubuntu11_ppc64el.deb ... 106s Unpacking libjpeg8:ppc64el (8c-2ubuntu11) ... 106s Selecting previously unselected package liblcms2-2:ppc64el. 106s Preparing to unpack .../18-liblcms2-2_2.16-2_ppc64el.deb ... 106s Unpacking liblcms2-2:ppc64el (2.16-2) ... 106s Selecting previously unselected package libopenjp2-7:ppc64el. 106s Preparing to unpack .../19-libopenjp2-7_2.5.3-2_ppc64el.deb ... 106s Unpacking libopenjp2-7:ppc64el (2.5.3-2) ... 106s Selecting previously unselected package libgraphite2-3:ppc64el. 106s Preparing to unpack .../20-libgraphite2-3_1.3.14-2ubuntu1_ppc64el.deb ... 106s Unpacking libgraphite2-3:ppc64el (1.3.14-2ubuntu1) ... 106s Selecting previously unselected package libharfbuzz0b:ppc64el. 106s Preparing to unpack .../21-libharfbuzz0b_10.2.0-1_ppc64el.deb ... 106s Unpacking libharfbuzz0b:ppc64el (10.2.0-1) ... 106s Selecting previously unselected package libraqm0:ppc64el. 106s Preparing to unpack .../22-libraqm0_0.10.2-1_ppc64el.deb ... 106s Unpacking libraqm0:ppc64el (0.10.2-1) ... 106s Selecting previously unselected package libdeflate0:ppc64el. 106s Preparing to unpack .../23-libdeflate0_1.23-2_ppc64el.deb ... 106s Unpacking libdeflate0:ppc64el (1.23-2) ... 106s Selecting previously unselected package libjbig0:ppc64el. 106s Preparing to unpack .../24-libjbig0_2.1-6.1ubuntu2_ppc64el.deb ... 106s Unpacking libjbig0:ppc64el (2.1-6.1ubuntu2) ... 106s Selecting previously unselected package liblerc4:ppc64el. 106s Preparing to unpack .../25-liblerc4_4.0.0+ds-5ubuntu1_ppc64el.deb ... 106s Unpacking liblerc4:ppc64el (4.0.0+ds-5ubuntu1) ... 106s Selecting previously unselected package libsharpyuv0:ppc64el. 106s Preparing to unpack .../26-libsharpyuv0_1.5.0-0.1_ppc64el.deb ... 106s Unpacking libsharpyuv0:ppc64el (1.5.0-0.1) ... 106s Selecting previously unselected package libwebp7:ppc64el. 106s Preparing to unpack .../27-libwebp7_1.5.0-0.1_ppc64el.deb ... 106s Unpacking libwebp7:ppc64el (1.5.0-0.1) ... 106s Selecting previously unselected package libtiff6:ppc64el. 106s Preparing to unpack .../28-libtiff6_4.7.0-3ubuntu1_ppc64el.deb ... 106s Unpacking libtiff6:ppc64el (4.7.0-3ubuntu1) ... 106s Selecting previously unselected package libwebpdemux2:ppc64el. 106s Preparing to unpack .../29-libwebpdemux2_1.5.0-0.1_ppc64el.deb ... 106s Unpacking libwebpdemux2:ppc64el (1.5.0-0.1) ... 106s Selecting previously unselected package libwebpmux3:ppc64el. 106s Preparing to unpack .../30-libwebpmux3_1.5.0-0.1_ppc64el.deb ... 106s Unpacking libwebpmux3:ppc64el (1.5.0-0.1) ... 106s Selecting previously unselected package python3-pil:ppc64el. 106s Preparing to unpack .../31-python3-pil_11.1.0-5build1_ppc64el.deb ... 106s Unpacking python3-pil:ppc64el (11.1.0-5build1) ... 106s Selecting previously unselected package libfontconfig1:ppc64el. 106s Preparing to unpack .../32-libfontconfig1_2.15.0-2.2ubuntu1_ppc64el.deb ... 106s Unpacking libfontconfig1:ppc64el (2.15.0-2.2ubuntu1) ... 106s Selecting previously unselected package libpixman-1-0:ppc64el. 106s Preparing to unpack .../33-libpixman-1-0_0.44.0-3_ppc64el.deb ... 106s Unpacking libpixman-1-0:ppc64el (0.44.0-3) ... 106s Selecting previously unselected package libxcb-render0:ppc64el. 106s Preparing to unpack .../34-libxcb-render0_1.17.0-2_ppc64el.deb ... 106s Unpacking libxcb-render0:ppc64el (1.17.0-2) ... 106s Selecting previously unselected package libxcb-shm0:ppc64el. 106s Preparing to unpack .../35-libxcb-shm0_1.17.0-2_ppc64el.deb ... 106s Unpacking libxcb-shm0:ppc64el (1.17.0-2) ... 106s Selecting previously unselected package libxrender1:ppc64el. 106s Preparing to unpack .../36-libxrender1_1%3a0.9.10-1.1build1_ppc64el.deb ... 106s Unpacking libxrender1:ppc64el (1:0.9.10-1.1build1) ... 106s Selecting previously unselected package libcairo2:ppc64el. 106s Preparing to unpack .../37-libcairo2_1.18.4-1_ppc64el.deb ... 106s Unpacking libcairo2:ppc64el (1.18.4-1) ... 106s Selecting previously unselected package python3-cairo. 106s Preparing to unpack .../38-python3-cairo_1.27.0-2_ppc64el.deb ... 106s Unpacking python3-cairo (1.27.0-2) ... 106s Selecting previously unselected package python3-freetype. 106s Preparing to unpack .../39-python3-freetype_2.5.1-1_all.deb ... 106s Unpacking python3-freetype (2.5.1-1) ... 106s Selecting previously unselected package python3-rlpycairo. 106s Preparing to unpack .../40-python3-rlpycairo_0.3.0-3_all.deb ... 106s Unpacking python3-rlpycairo (0.3.0-3) ... 106s Selecting previously unselected package python3-reportlab. 106s Preparing to unpack .../41-python3-reportlab_4.3.1-1_all.deb ... 106s Unpacking python3-reportlab (4.3.1-1) ... 106s Selecting previously unselected package xml-core. 106s Preparing to unpack .../42-xml-core_0.19_all.deb ... 106s Unpacking xml-core (0.19) ... 106s Selecting previously unselected package w3c-sgml-lib. 106s Preparing to unpack .../43-w3c-sgml-lib_1.3-3_all.deb ... 106s Unpacking w3c-sgml-lib (1.3-3) ... 106s Selecting previously unselected package python3-biopython. 106s Preparing to unpack .../44-python3-biopython_1.85+dfsg-2build1_ppc64el.deb ... 106s Unpacking python3-biopython (1.85+dfsg-2build1) ... 107s Selecting previously unselected package ncbi-data. 107s Preparing to unpack .../45-ncbi-data_6.1.20170106+dfsg2-5_all.deb ... 107s Unpacking ncbi-data (6.1.20170106+dfsg2-5) ... 107s Selecting previously unselected package libmbedcrypto16:ppc64el. 107s Preparing to unpack .../46-libmbedcrypto16_3.6.2-3ubuntu1_ppc64el.deb ... 107s Unpacking libmbedcrypto16:ppc64el (3.6.2-3ubuntu1) ... 107s Selecting previously unselected package libmbedx509-7:ppc64el. 107s Preparing to unpack .../47-libmbedx509-7_3.6.2-3ubuntu1_ppc64el.deb ... 107s Unpacking libmbedx509-7:ppc64el (3.6.2-3ubuntu1) ... 107s Selecting previously unselected package libmbedtls21:ppc64el. 107s Preparing to unpack .../48-libmbedtls21_3.6.2-3ubuntu1_ppc64el.deb ... 107s Unpacking libmbedtls21:ppc64el (3.6.2-3ubuntu1) ... 107s Selecting previously unselected package ncbi-blast+. 107s Preparing to unpack .../49-ncbi-blast+_2.16.0+ds-6build1_ppc64el.deb ... 107s Unpacking ncbi-blast+ (2.16.0+ds-6build1) ... 107s Selecting previously unselected package kaptive. 107s Preparing to unpack .../50-kaptive_2.0.8-1_all.deb ... 107s Unpacking kaptive (2.0.8-1) ... 107s Selecting previously unselected package kaptive-data. 107s Preparing to unpack .../51-kaptive-data_2.0.8-1_all.deb ... 107s Unpacking kaptive-data (2.0.8-1) ... 107s Selecting previously unselected package libcapnp-1.1.0:ppc64el. 107s Preparing to unpack .../52-libcapnp-1.1.0_1.1.0-2_ppc64el.deb ... 107s Unpacking libcapnp-1.1.0:ppc64el (1.1.0-2) ... 107s Selecting previously unselected package libgslcblas0:ppc64el. 107s Preparing to unpack .../53-libgslcblas0_2.8+dfsg-5ubuntu1_ppc64el.deb ... 107s Unpacking libgslcblas0:ppc64el (2.8+dfsg-5ubuntu1) ... 107s Selecting previously unselected package libgsl28:ppc64el. 107s Preparing to unpack .../54-libgsl28_2.8+dfsg-5ubuntu1_ppc64el.deb ... 107s Unpacking libgsl28:ppc64el (2.8+dfsg-5ubuntu1) ... 107s Selecting previously unselected package libmurmurhash2:ppc64el. 107s Preparing to unpack .../55-libmurmurhash2_1.6-1_ppc64el.deb ... 107s Unpacking libmurmurhash2:ppc64el (1.6-1) ... 107s Selecting previously unselected package mash. 107s Preparing to unpack .../56-mash_2.3+dfsg-6build2_ppc64el.deb ... 107s Unpacking mash (2.3+dfsg-6build2) ... 108s Selecting previously unselected package kleborate. 108s Preparing to unpack .../57-kleborate_2.4.1-4_ppc64el.deb ... 108s Unpacking kleborate (2.4.1-4) ... 108s Selecting previously unselected package kleborate-examples. 108s Preparing to unpack .../58-kleborate-examples_2.4.1-4_all.deb ... 108s Unpacking kleborate-examples (2.4.1-4) ... 108s Setting up libgraphite2-3:ppc64el (1.3.14-2ubuntu1) ... 108s Setting up liblcms2-2:ppc64el (2.16-2) ... 108s Setting up ncbi-data (6.1.20170106+dfsg2-5) ... 108s Setting up libpixman-1-0:ppc64el (0.44.0-3) ... 108s Setting up libsharpyuv0:ppc64el (1.5.0-0.1) ... 108s Setting up liblerc4:ppc64el (4.0.0+ds-5ubuntu1) ... 108s Setting up libxrender1:ppc64el (1:0.9.10-1.1build1) ... 108s Setting up libgslcblas0:ppc64el (2.8+dfsg-5ubuntu1) ... 108s Setting up libmurmurhash2:ppc64el (1.6-1) ... 108s Setting up libxcb-render0:ppc64el (1.17.0-2) ... 108s Setting up x11-common (1:7.7+23ubuntu4) ... 108s Setting up libdeflate0:ppc64el (1.23-2) ... 108s Setting up libxcb-shm0:ppc64el (1.17.0-2) ... 108s Setting up libgomp1:ppc64el (15-20250404-0ubuntu1) ... 108s Setting up python3-freetype (2.5.1-1) ... 108s Setting up libjbig0:ppc64el (2.1-6.1ubuntu2) ... 108s Setting up libfontenc1:ppc64el (1:1.1.8-1build1) ... 108s Setting up libblas3:ppc64el (3.12.1-2) ... 108s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode 108s Setting up kleborate-examples (2.4.1-4) ... 108s Setting up xfonts-encodings (1:1.0.5-0ubuntu2) ... 108s Setting up libimagequant0:ppc64el (2.18.0-1build1) ... 108s Setting up fonts-dejavu-mono (2.37-8) ... 108s Setting up python3-numpy-dev:ppc64el (1:2.2.3+ds-5) ... 108s Setting up fonts-dejavu-core (2.37-8) ... 109s Setting up kaptive-data (2.0.8-1) ... 109s Setting up libjpeg-turbo8:ppc64el (2.1.5-3ubuntu2) ... 109s Setting up libgfortran5:ppc64el (15-20250404-0ubuntu1) ... 109s Setting up libwebp7:ppc64el (1.5.0-0.1) ... 109s Setting up libopenjp2-7:ppc64el (2.5.3-2) ... 109s Setting up libharfbuzz0b:ppc64el (10.2.0-1) ... 109s Setting up sgml-base (1.31) ... 109s Setting up libcapnp-1.1.0:ppc64el (1.1.0-2) ... 109s Setting up libmbedcrypto16:ppc64el (3.6.2-3ubuntu1) ... 109s Setting up libgsl28:ppc64el (2.8+dfsg-5ubuntu1) ... 109s Setting up libwebpmux3:ppc64el (1.5.0-0.1) ... 109s Setting up libjpeg8:ppc64el (8c-2ubuntu11) ... 109s Setting up liblapack3:ppc64el (3.12.1-2) ... 109s update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode 109s Setting up fontconfig-config (2.15.0-2.2ubuntu1) ... 109s Setting up libwebpdemux2:ppc64el (1.5.0-0.1) ... 109s Setting up xfonts-utils (1:7.7+7) ... 109s Setting up libmbedx509-7:ppc64el (3.6.2-3ubuntu1) ... 109s Setting up libraqm0:ppc64el (0.10.2-1) ... 109s Setting up mash (2.3+dfsg-6build2) ... 109s Setting up python3-numpy (1:2.2.3+ds-5) ... 111s Setting up libmbedtls21:ppc64el (3.6.2-3ubuntu1) ... 111s Setting up libtiff6:ppc64el (4.7.0-3ubuntu1) ... 111s Setting up xml-core (0.19) ... 111s Setting up libfontconfig1:ppc64el (2.15.0-2.2ubuntu1) ... 111s Setting up fonts-urw-base35 (20200910-8) ... 111s Setting up libcairo2:ppc64el (1.18.4-1) ... 111s Setting up ncbi-blast+ (2.16.0+ds-6build1) ... 111s Setting up python3-pil:ppc64el (11.1.0-5build1) ... 112s Setting up python3-cairo (1.27.0-2) ... 112s Setting up python3-rlpycairo (0.3.0-3) ... 112s Setting up python3-reportlab (4.3.1-1) ... 113s Processing triggers for man-db (2.13.0-1) ... 115s Processing triggers for libc-bin (2.41-6ubuntu1) ... 115s Processing triggers for sgml-base (1.31) ... 115s Setting up w3c-sgml-lib (1.3-3) ... 146s Setting up python3-biopython (1.85+dfsg-2build1) ... 147s Setting up kaptive (2.0.8-1) ... 147s Setting up kleborate (2.4.1-4) ... 149s autopkgtest [15:53:54]: test run-unit-test: [----------------------- 150s /usr/lib/python3/dist-packages/Bio/pairwise2.py:278: BiopythonDeprecationWarning: Bio.pairwise2 has been deprecated, and we intend to remove it in a future release of Biopython. As an alternative, please consider using Bio.Align.PairwiseAligner as a replacement, and contact the Biopython developers if you still need the Bio.pairwise2 module. 150s warnings.warn( 254s strain species ST virulence_score Yersiniabactin YbST Colibactin CbST Aerobactin AbST Salmochelin SmST RmpADC RmST rmpA2 wzi K_locus 254s Klebs_HS11286 Klebsiella pneumoniae ST11 1 ybt 9; ICEKp3 15 - 0 - 0 - 0 - 0 - wzi74 KL103 254s Klebs_Kp1084 Klebsiella pneumoniae ST23 2 ybt 1; ICEKp10 47 clb 2 37 - 0 - 0 - 0 - wzi172 KL1 254s MGH78578 Klebsiella pneumoniae ST38 0 - 0 - 0 - 0 - 0 - 0 - wzi50 KL15 (KL17,KL51,KL52) 254s NTUH-K2044 Klebsiella pneumoniae ST23 4 ybt 2; ICEKp1 326 - 0 iuc 1 1 iro 1,iro 3 19,18 rmp 1; KpVP-1 (truncated),rmp 3; ICEKp1 (truncated) 26-1LV,119 rmpA2_3-47% wzi1 KL1 255s /usr/lib/python3/dist-packages/Bio/pairwise2.py:278: BiopythonDeprecationWarning: Bio.pairwise2 has been deprecated, and we intend to remove it in a future release of Biopython. As an alternative, please consider using Bio.Align.PairwiseAligner as a replacement, and contact the Biopython developers if you still need the Bio.pairwise2 module. 255s warnings.warn( 417s strain species ST virulence_score resistance_score Yersiniabactin YbST Colibactin CbST Aerobactin AbST Salmochelin SmST RmpADC RmST rmpA2 wzi K_locus AGly_acquired Col_acquired Fcyn_acquired Flq_acquired Gly_acquired MLS_acquired Phe_acquired Rif_acquired Sul_acquired Tet_acquired Tgc_acquired Tmt_acquired Bla_acquired Bla_inhR_acquired Bla_ESBL_acquired Bla_ESBL_inhR_acquired Bla_Carb_acquired Bla_chr SHV_mutations Omp_mutations Col_mutations Flq_mutations truncated_resistance_hits spurious_resistance_hits 417s Klebs_HS11286 Klebsiella pneumoniae ST11 1 3 ybt 9; ICEKp3 15 - 0 - 0 - 0 - 0 - wzi74 KL103 aadA2^;rmtB;strA.v1^;strB.v1 - - - - - - - sul2 tet(G).v1 - dfrA12* TEM-1;TEM-1;TEM-1 - CTX-M-14;CTX-M-14 - KPC-2 SHV-11 35Q OmpK35-40% PmrB-10% GyrA-83I;ParC-80I aac(3)-IId*?-0% floR.v2*?;sul1?-63% 417s Klebs_Kp1084 Klebsiella pneumoniae ST23 2 0 ybt 1; ICEKp10 47 clb 2 37 - 0 - 0 - 0 - wzi172 KL1 - - - - - - - - - - - - - - - - - SHV-11^ 35Q - - - - - 417s MGH78578 Klebsiella pneumoniae ST38 0 1 - 0 - 0 - 0 - 0 - 0 - wzi50 KL15 (KL17,KL51,KL52) aac(6')-Ib'.v1;aadA*;ant(2'')-Ia;aph(3')-Ia;strA.v1;strB.v1 - - - - - catA1*;cmlA5 - sul1;sul2 tet(D) - - TEM-1D.v1^;TEM-1D.v1^ - SHV-12 - - SHV-11^ 238S;240K;35Q;35Q OmpK35-86% - GyrA-83Y OXA-9.v1*-42% - 417s NTUH-K2044 Klebsiella pneumoniae ST23 4 0 ybt 2; ICEKp1 326 - 0 iuc 1 1 iro 1,iro 3 19,18 rmp 1; KpVP-1 (truncated),rmp 3; ICEKp1 (truncated) 26-1LV,119 rmpA2_3-47% wzi1 KL1 - - - - - - - - - - - - - - - - - SHV-11^ 35Q - - - - - 417s /usr/lib/python3/dist-packages/Bio/pairwise2.py:278: BiopythonDeprecationWarning: Bio.pairwise2 has been deprecated, and we intend to remove it in a future release of Biopython. As an alternative, please consider using Bio.Align.PairwiseAligner as a replacement, and contact the Biopython developers if you still need the Bio.pairwise2 module. 417s warnings.warn( 920s strain species ST virulence_score resistance_score Yersiniabactin YbST Colibactin CbST Aerobactin AbST Salmochelin SmST RmpADC RmST rmpA2 wzi K_locus K_locus_confidence O_locus O_locus_confidence AGly_acquired Col_acquired Fcyn_acquired Flq_acquired Gly_acquired MLS_acquired Phe_acquired Rif_acquired Sul_acquired Tet_acquired Tgc_acquired Tmt_acquired Bla_acquired Bla_inhR_acquired Bla_ESBL_acquired Bla_ESBL_inhR_acquired Bla_Carb_acquired Bla_chr SHV_mutations Omp_mutations Col_mutations Flq_mutations truncated_resistance_hits spurious_resistance_hits 920s Klebs_HS11286 Klebsiella pneumoniae ST11 1 3 ybt 9; ICEKp3 15 - 0 - 0 - 0 - 0 - wzi74 KL103 Very high O1/O2v1 Very high aadA2^;rmtB;strA.v1^;strB.v1 - - - - - - - sul2 tet(G).v1 - dfrA12* TEM-1;TEM-1;TEM-1 - CTX-M-14;CTX-M-14 - KPC-2 SHV-11 35Q OmpK35-40% PmrB-10% GyrA-83I;ParC-80I aac(3)-IId*?-0% floR.v2*?;sul1?-63% 920s Klebs_Kp1084 Klebsiella pneumoniae ST23 2 0 ybt 1; ICEKp10 47 clb 2 37 - 0 - 0 - 0 - wzi172 unknown (KL1) None O1/O2v2 High - - - - - - - - - - - - - - - - - SHV-11^ 35Q - - - - - 920s MGH78578 Klebsiella pneumoniae ST38 0 1 - 0 - 0 - 0 - 0 - 0 - wzi50 KL52 Perfect OL13 High aac(6')-Ib'.v1;aadA*;ant(2'')-Ia;aph(3')-Ia;strA.v1;strB.v1 - - - - - catA1*;cmlA5 - sul1;sul2 tet(D) - - TEM-1D.v1^;TEM-1D.v1^ - SHV-12 - - SHV-11^ 238S;240K;35Q;35Q OmpK35-86% - GyrA-83Y OXA-9.v1*-42% - 920s NTUH-K2044 Klebsiella pneumoniae ST23 4 0 ybt 2; ICEKp1 326 - 0 iuc 1 1 iro 1,iro 3 19,18 rmp 1; KpVP-1 (truncated),rmp 3; ICEKp1 (truncated) 26-1LV,119 rmpA2_3-47% wzi1 KL1 Perfect O1/O2v2 Very high - - - - - - - - - - - - - - - - - SHV-11^ 35Q - - - - - 921s autopkgtest [16:06:46]: test run-unit-test: -----------------------] 921s run-unit-test PASS 921s autopkgtest [16:06:46]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 921s autopkgtest [16:06:46]: @@@@@@@@@@@@@@@@@@@@ summary 921s run-unit-test PASS 925s nova [W] Using flock in prodstack7-ppc64el 925s Creating nova instance adt-questing-ppc64el-kleborate-20250503-155125-juju-7f2275-prod-proposed-migration-environment-21-7d482e6f-3f2a-4bbe-80a6-ff97d214b930 from image adt/ubuntu-questing-ppc64el-server-20250503.img (UUID d1ea0db3-9d36-4f68-88a9-f2901b9320e5)... 925s nova [W] Timed out waiting for 3803b073-a1ab-49ed-8bfe-ef1f68bd80bc to get deleted.