0s autopkgtest [16:21:05]: starting date and time: 2025-05-02 16:21:05+0000
  0s autopkgtest [16:21:05]: git checkout: 9986aa8c Merge branch 'skia/fix_network_interface' into 'ubuntu/production'
  0s autopkgtest [16:21:05]: host juju-7f2275-prod-proposed-migration-environment-21; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.29wzl25w/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base,src:r-bioc-bioccheck --apt-upgrade r-cran-sdmtools --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.5.0-3 r-bioc-bioccheck/1.42.1+dfsg-2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-arm64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-21@sto01-arm64-10.secgroup --name adt-questing-arm64-r-cran-sdmtools-20250502-162105-juju-7f2275-prod-proposed-migration-environment-21-991d48da-7136-4eec-ad36-5cf981c60f73 --image adt/ubuntu-questing-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-21 --net-id=net_prod-autopkgtest-workers-arm64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/
 77s autopkgtest [16:22:22]: testbed dpkg architecture: arm64
 77s autopkgtest [16:22:22]: testbed apt version: 3.0.0
 77s autopkgtest [16:22:22]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 77s autopkgtest [16:22:22]: testbed release detected to be: None
 78s autopkgtest [16:22:23]: updating testbed package index (apt update)
 78s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB]
 78s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease
 78s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease
 78s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease
 78s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [2024 kB]
 79s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [44.2 kB]
 79s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [164 kB]
 79s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 Packages [204 kB]
 79s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 Packages [1467 kB]
 79s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse arm64 Packages [14.8 kB]
 79s Fetched 4028 kB in 1s (5245 kB/s)
 80s Reading package lists...
 80s autopkgtest [16:22:25]: upgrading testbed (apt dist-upgrade and autopurge)
 80s Reading package lists...
 81s Building dependency tree...
 81s Reading state information...
 81s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
 81s Starting 2 pkgProblemResolver with broken count: 0
 81s Done
 82s Entering ResolveByKeep
 82s 
 82s Calculating upgrade...
 82s The following packages will be upgraded:
 82s   libperl5.40 perl perl-base perl-modules-5.40
 83s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 83s Need to get 10.0 MB of archives.
 83s After this operation, 0 B of additional disk space will be used.
 83s Get:1 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libperl5.40 arm64 5.40.1-3 [4780 kB]
 83s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 perl arm64 5.40.1-3 [262 kB]
 83s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 perl-base arm64 5.40.1-3 [1786 kB]
 83s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 perl-modules-5.40 all 5.40.1-3 [3217 kB]
 83s Fetched 10.0 MB in 1s (19.6 MB/s)
 83s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 85225 files and directories currently installed.)
 83s Preparing to unpack .../libperl5.40_5.40.1-3_arm64.deb ...
 84s Unpacking libperl5.40:arm64 (5.40.1-3) over (5.40.1-2ubuntu0.1) ...
 84s Preparing to unpack .../perl_5.40.1-3_arm64.deb ...
 84s Unpacking perl (5.40.1-3) over (5.40.1-2ubuntu0.1) ...
 84s Preparing to unpack .../perl-base_5.40.1-3_arm64.deb ...
 84s Unpacking perl-base (5.40.1-3) over (5.40.1-2ubuntu0.1) ...
 84s Setting up perl-base (5.40.1-3) ...
 84s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 85225 files and directories currently installed.)
 84s Preparing to unpack .../perl-modules-5.40_5.40.1-3_all.deb ...
 84s Unpacking perl-modules-5.40 (5.40.1-3) over (5.40.1-2ubuntu0.1) ...
 84s Setting up perl-modules-5.40 (5.40.1-3) ...
 84s Setting up libperl5.40:arm64 (5.40.1-3) ...
 84s Setting up perl (5.40.1-3) ...
 84s Processing triggers for man-db (2.13.0-1) ...
 85s Processing triggers for libc-bin (2.41-6ubuntu1) ...
 85s Reading package lists...
 85s Building dependency tree...
 85s Reading state information...
 86s Starting pkgProblemResolver with broken count: 0
 86s Starting 2 pkgProblemResolver with broken count: 0
 86s Done
 86s Solving dependencies...
 86s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 89s autopkgtest [16:22:34]: testbed running kernel: Linux 6.14.0-15-generic #15-Ubuntu SMP PREEMPT_DYNAMIC Sun Apr  6 14:37:51 UTC 2025
 89s autopkgtest [16:22:34]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-sdmtools
 90s Get:1 http://ftpmaster.internal/ubuntu questing/universe r-cran-sdmtools 1.1-221.2-1build1 (dsc) [2109 B]
 90s Get:2 http://ftpmaster.internal/ubuntu questing/universe r-cran-sdmtools 1.1-221.2-1build1 (tar) [64.9 kB]
 90s Get:3 http://ftpmaster.internal/ubuntu questing/universe r-cran-sdmtools 1.1-221.2-1build1 (diff) [2056 B]
 90s gpgv: Signature made Sat May 30 19:34:52 2020 UTC
 90s gpgv:                using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2
 90s gpgv: Can't check signature: No public key
 90s dpkg-source: warning: cannot verify inline signature for ./r-cran-sdmtools_1.1-221.2-1build1.dsc: no acceptable signature found
 90s autopkgtest [16:22:35]: testing package r-cran-sdmtools version 1.1-221.2-1build1
 91s autopkgtest [16:22:36]: build not needed
 92s autopkgtest [16:22:37]: test pkg-r-autopkgtest: preparing testbed
 92s Reading package lists...
 93s Building dependency tree...
 93s Reading state information...
 93s Starting pkgProblemResolver with broken count: 0
 93s Starting 2 pkgProblemResolver with broken count: 0
 93s Done
 94s The following NEW packages will be installed:
 94s   build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu
 94s   dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
 94s   g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14
 94s   gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gdal-data gdal-plugins
 94s   gfortran gfortran-14 gfortran-14-aarch64-linux-gnu
 94s   gfortran-aarch64-linux-gnu icu-devtools libabsl20230802 libaec0 libaom3
 94s   libarmadillo14 libarpack2t64 libasan8 libavif16 libblas-dev libblas3
 94s   libblosc1 libbz2-dev libcairo2 libcc1-0 libcfitsio10t64 libdatrie1 libdav1d7
 94s   libde265-0 libdeflate-dev libdeflate0 libfontconfig1 libfreexl1 libfyba0t64
 94s   libgav1-1 libgcc-14-dev libgdal36 libgeos-c1t64 libgeos3.13.1 libgeotiff5
 94s   libgfortran-14-dev libgfortran5 libgif7 libgomp1 libgpgmepp6t64
 94s   libgraphite2-3 libharfbuzz0b libhdf4-0-alt libhdf5-310 libhdf5-hl-310
 94s   libheif-plugin-aomdec libheif-plugin-libde265 libheif1 libhwasan0 libice6
 94s   libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8
 94s   libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libkmlbase1t64 libkmldom1t64
 94s   libkmlengine1t64 liblapack-dev liblapack3 liblcms2-2 liblerc4 liblsan0
 94s   libltdl7 liblzma-dev libminizip1t64 libmpc3 libmysqlclient24 libncurses-dev
 94s   libnetcdf22 libodbc2 libodbcinst2 libogdi4.1 libopenjp2-7 libpango-1.0-0
 94s   libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libpcre2-16-0
 94s   libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3
 94s   libpng-dev libpoppler147 libpq5 libproj25 libqhull-r8.0 librav1e0.7
 94s   libreadline-dev librttopo1 libsharpyuv0 libsm6 libsnappy1v5
 94s   libspatialite8t64 libstdc++-14-dev libsvtav1enc2 libsz2 libtcl8.6
 94s   libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 libubsan1
 94s   liburiparser1 libwebp7 libxcb-render0 libxcb-shm0 libxerces-c3.2t64 libxft2
 94s   libxrender1 libxss1 libxt6t64 libyuv0 libzstd-dev littler mysql-common
 94s   pkg-r-autopkgtest pkgconf pkgconf-bin proj-data r-base-core r-base-dev
 94s   r-cran-lattice r-cran-littler r-cran-pkgkitten r-cran-r.methodss3
 94s   r-cran-r.oo r-cran-r.utils r-cran-raster r-cran-rcpp r-cran-sdmtools
 94s   r-cran-sp r-cran-terra unixodbc-common unzip x11-common xdg-utils zip
 94s   zlib1g-dev
 94s 0 upgraded, 166 newly installed, 0 to remove and 0 not upgraded.
 94s Need to get 183 MB of archives.
 94s After this operation, 571 MB of additional disk space will be used.
 94s Get:1 http://ftpmaster.internal/ubuntu questing/main arm64 libisl23 arm64 0.27-1 [676 kB]
 94s Get:2 http://ftpmaster.internal/ubuntu questing/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB]
 94s Get:3 http://ftpmaster.internal/ubuntu questing/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-19ubuntu2 [10.6 MB]
 94s Get:4 http://ftpmaster.internal/ubuntu questing/main arm64 cpp-14 arm64 14.2.0-19ubuntu2 [1026 B]
 94s Get:5 http://ftpmaster.internal/ubuntu questing/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [5558 B]
 94s Get:6 http://ftpmaster.internal/ubuntu questing/main arm64 cpp arm64 4:14.2.0-1ubuntu1 [22.4 kB]
 94s Get:7 http://ftpmaster.internal/ubuntu questing/main arm64 libcc1-0 arm64 15-20250404-0ubuntu1 [49.1 kB]
 94s Get:8 http://ftpmaster.internal/ubuntu questing/main arm64 libgomp1 arm64 15-20250404-0ubuntu1 [147 kB]
 94s Get:9 http://ftpmaster.internal/ubuntu questing/main arm64 libitm1 arm64 15-20250404-0ubuntu1 [27.8 kB]
 94s Get:10 http://ftpmaster.internal/ubuntu questing/main arm64 libasan8 arm64 15-20250404-0ubuntu1 [2922 kB]
 94s Get:11 http://ftpmaster.internal/ubuntu questing/main arm64 liblsan0 arm64 15-20250404-0ubuntu1 [1318 kB]
 94s Get:12 http://ftpmaster.internal/ubuntu questing/main arm64 libtsan2 arm64 15-20250404-0ubuntu1 [2692 kB]
 94s Get:13 http://ftpmaster.internal/ubuntu questing/main arm64 libubsan1 arm64 15-20250404-0ubuntu1 [1177 kB]
 95s Get:14 http://ftpmaster.internal/ubuntu questing/main arm64 libhwasan0 arm64 15-20250404-0ubuntu1 [1640 kB]
 95s Get:15 http://ftpmaster.internal/ubuntu questing/main arm64 libgcc-14-dev arm64 14.2.0-19ubuntu2 [2593 kB]
 95s Get:16 http://ftpmaster.internal/ubuntu questing/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-19ubuntu2 [20.9 MB]
 95s Get:17 http://ftpmaster.internal/ubuntu questing/main arm64 gcc-14 arm64 14.2.0-19ubuntu2 [529 kB]
 95s Get:18 http://ftpmaster.internal/ubuntu questing/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1200 B]
 95s Get:19 http://ftpmaster.internal/ubuntu questing/main arm64 gcc arm64 4:14.2.0-1ubuntu1 [4998 B]
 95s Get:20 http://ftpmaster.internal/ubuntu questing/main arm64 libstdc++-14-dev arm64 14.2.0-19ubuntu2 [2501 kB]
 95s Get:21 http://ftpmaster.internal/ubuntu questing/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-19ubuntu2 [12.1 MB]
 95s Get:22 http://ftpmaster.internal/ubuntu questing/main arm64 g++-14 arm64 14.2.0-19ubuntu2 [23.0 kB]
 95s Get:23 http://ftpmaster.internal/ubuntu questing/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [956 B]
 95s Get:24 http://ftpmaster.internal/ubuntu questing/main arm64 g++ arm64 4:14.2.0-1ubuntu1 [1080 B]
 95s Get:25 http://ftpmaster.internal/ubuntu questing/main arm64 build-essential arm64 12.12ubuntu1 [5082 B]
 95s Get:26 http://ftpmaster.internal/ubuntu questing/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB]
 95s Get:27 http://ftpmaster.internal/ubuntu questing/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB]
 95s Get:28 http://ftpmaster.internal/ubuntu questing/main arm64 fonts-dejavu-core all 2.37-8 [835 kB]
 95s Get:29 http://ftpmaster.internal/ubuntu questing/main arm64 fontconfig-config arm64 2.15.0-2.2ubuntu1 [37.9 kB]
 95s Get:30 http://ftpmaster.internal/ubuntu questing/main arm64 libfontconfig1 arm64 2.15.0-2.2ubuntu1 [144 kB]
 95s Get:31 http://ftpmaster.internal/ubuntu questing/main arm64 fontconfig arm64 2.15.0-2.2ubuntu1 [191 kB]
 95s Get:32 http://ftpmaster.internal/ubuntu questing/universe arm64 gdal-data all 3.10.2+dfsg-1build3 [269 kB]
 95s Get:33 http://ftpmaster.internal/ubuntu questing/universe arm64 gdal-plugins arm64 3.10.2+dfsg-1build3 [25.7 kB]
 95s Get:34 http://ftpmaster.internal/ubuntu questing/main arm64 libgfortran5 arm64 15-20250404-0ubuntu1 [444 kB]
 95s Get:35 http://ftpmaster.internal/ubuntu questing/main arm64 libgfortran-14-dev arm64 14.2.0-19ubuntu2 [498 kB]
 95s Get:36 http://ftpmaster.internal/ubuntu questing/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-19ubuntu2 [11.4 MB]
 96s Get:37 http://ftpmaster.internal/ubuntu questing/main arm64 gfortran-14 arm64 14.2.0-19ubuntu2 [14.2 kB]
 96s Get:38 http://ftpmaster.internal/ubuntu questing/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1022 B]
 96s Get:39 http://ftpmaster.internal/ubuntu questing/main arm64 gfortran arm64 4:14.2.0-1ubuntu1 [1166 B]
 96s Get:40 http://ftpmaster.internal/ubuntu questing/main arm64 icu-devtools arm64 76.1-1ubuntu2 [213 kB]
 96s Get:41 http://ftpmaster.internal/ubuntu questing/main arm64 libabsl20230802 arm64 20230802.1-4.2 [491 kB]
 96s Get:42 http://ftpmaster.internal/ubuntu questing/universe arm64 libaec0 arm64 1.1.3-1 [22.0 kB]
 96s Get:43 http://ftpmaster.internal/ubuntu questing/main arm64 libaom3 arm64 3.12.0-1 [1828 kB]
 96s Get:44 http://ftpmaster.internal/ubuntu questing/main arm64 libblas3 arm64 3.12.1-2 [161 kB]
 96s Get:45 http://ftpmaster.internal/ubuntu questing/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB]
 96s Get:46 http://ftpmaster.internal/ubuntu questing/universe arm64 libarpack2t64 arm64 3.9.1-4 [94.4 kB]
 96s Get:47 http://ftpmaster.internal/ubuntu questing/universe arm64 libarmadillo14 arm64 1:14.2.3+dfsg-1 [105 kB]
 96s Get:48 http://ftpmaster.internal/ubuntu questing/universe arm64 libdav1d7 arm64 1.5.1-1 [304 kB]
 96s Get:49 http://ftpmaster.internal/ubuntu questing/universe arm64 libgav1-1 arm64 0.19.0-3 [572 kB]
 96s Get:50 http://ftpmaster.internal/ubuntu questing/universe arm64 librav1e0.7 arm64 0.7.1-9 [763 kB]
 96s Get:51 http://ftpmaster.internal/ubuntu questing/universe arm64 libsvtav1enc2 arm64 2.3.0+dfsg-1 [1832 kB]
 96s Get:52 http://ftpmaster.internal/ubuntu questing/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB]
 96s Get:53 http://ftpmaster.internal/ubuntu questing/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B]
 96s Get:54 http://ftpmaster.internal/ubuntu questing/main arm64 libyuv0 arm64 0.0.1904.20250204-1 [159 kB]
 96s Get:55 http://ftpmaster.internal/ubuntu questing/universe arm64 libavif16 arm64 1.2.1-1ubuntu1 [115 kB]
 96s Get:56 http://ftpmaster.internal/ubuntu questing/main arm64 libblas-dev arm64 3.12.1-2 [126 kB]
 96s Get:57 http://ftpmaster.internal/ubuntu questing/main arm64 libsnappy1v5 arm64 1.2.1-1 [30.4 kB]
 96s Get:58 http://ftpmaster.internal/ubuntu questing/universe arm64 libblosc1 arm64 1.21.5+ds-1build1 [25.7 kB]
 96s Get:59 http://ftpmaster.internal/ubuntu questing/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB]
 96s Get:60 http://ftpmaster.internal/ubuntu questing/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB]
 96s Get:61 http://ftpmaster.internal/ubuntu questing/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB]
 96s Get:62 http://ftpmaster.internal/ubuntu questing/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B]
 96s Get:63 http://ftpmaster.internal/ubuntu questing/main arm64 libxrender1 arm64 1:0.9.10-1.1build1 [18.8 kB]
 96s Get:64 http://ftpmaster.internal/ubuntu questing/main arm64 libcairo2 arm64 1.18.4-1 [560 kB]
 96s Get:65 http://ftpmaster.internal/ubuntu questing/universe arm64 libcfitsio10t64 arm64 4.5.0-5 [519 kB]
 96s Get:66 http://ftpmaster.internal/ubuntu questing/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB]
 96s Get:67 http://ftpmaster.internal/ubuntu questing/main arm64 libde265-0 arm64 1.0.15-1build5 [146 kB]
 96s Get:68 http://ftpmaster.internal/ubuntu questing/main arm64 libdeflate0 arm64 1.23-1 [46.2 kB]
 96s Get:69 http://ftpmaster.internal/ubuntu questing/main arm64 libdeflate-dev arm64 1.23-1 [53.7 kB]
 96s Get:70 http://ftpmaster.internal/ubuntu questing/universe arm64 libfyba0t64 arm64 4.1.1-11build1 [120 kB]
 96s Get:71 http://ftpmaster.internal/ubuntu questing/universe arm64 libminizip1t64 arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [23.1 kB]
 96s Get:72 http://ftpmaster.internal/ubuntu questing/universe arm64 libfreexl1 arm64 2.0.0-1build2 [41.9 kB]
 96s Get:73 http://ftpmaster.internal/ubuntu questing/universe arm64 libgeos3.13.1 arm64 3.13.1-1 [916 kB]
 96s Get:74 http://ftpmaster.internal/ubuntu questing/universe arm64 libgeos-c1t64 arm64 3.13.1-1 [92.2 kB]
 96s Get:75 http://ftpmaster.internal/ubuntu questing/universe arm64 proj-data all 9.5.1-1 [7924 kB]
 96s Get:76 http://ftpmaster.internal/ubuntu questing/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB]
 96s Get:77 http://ftpmaster.internal/ubuntu questing/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB]
 96s Get:78 http://ftpmaster.internal/ubuntu questing/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB]
 96s Get:79 http://ftpmaster.internal/ubuntu questing/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB]
 96s Get:80 http://ftpmaster.internal/ubuntu questing/main arm64 libtiff6 arm64 4.7.0-3ubuntu1 [197 kB]
 96s Get:81 http://ftpmaster.internal/ubuntu questing/universe arm64 libproj25 arm64 9.5.1-1 [1342 kB]
 96s Get:82 http://ftpmaster.internal/ubuntu questing/universe arm64 libgeotiff5 arm64 1.7.4-1 [58.9 kB]
 96s Get:83 http://ftpmaster.internal/ubuntu questing/main arm64 libgif7 arm64 5.2.2-1ubuntu2 [36.1 kB]
 96s Get:84 http://ftpmaster.internal/ubuntu questing/universe arm64 libsz2 arm64 1.1.3-1 [5254 B]
 96s Get:85 http://ftpmaster.internal/ubuntu questing/universe arm64 libhdf4-0-alt arm64 4.3.0-1 [271 kB]
 96s Get:86 http://ftpmaster.internal/ubuntu questing/universe arm64 libhdf5-310 arm64 1.14.5+repack-3 [1331 kB]
 96s Get:87 http://ftpmaster.internal/ubuntu questing/main arm64 libheif-plugin-aomdec arm64 1.19.7-1 [11.4 kB]
 96s Get:88 http://ftpmaster.internal/ubuntu questing/main arm64 libheif-plugin-libde265 arm64 1.19.7-1 [8890 B]
 96s Get:89 http://ftpmaster.internal/ubuntu questing/main arm64 libheif1 arm64 1.19.7-1 [371 kB]
 96s Get:90 http://ftpmaster.internal/ubuntu questing/universe arm64 liburiparser1 arm64 0.9.8+dfsg-2 [36.3 kB]
 96s Get:91 http://ftpmaster.internal/ubuntu questing/universe arm64 libkmlbase1t64 arm64 1.3.0-12build1 [47.8 kB]
 96s Get:92 http://ftpmaster.internal/ubuntu questing/universe arm64 libkmldom1t64 arm64 1.3.0-12build1 [146 kB]
 96s Get:93 http://ftpmaster.internal/ubuntu questing/universe arm64 libkmlengine1t64 arm64 1.3.0-12build1 [68.1 kB]
 96s Get:94 http://ftpmaster.internal/ubuntu questing/main arm64 mysql-common all 5.8+1.1.1ubuntu1 [6922 B]
 96s Get:95 http://ftpmaster.internal/ubuntu questing/main arm64 libmysqlclient24 arm64 8.4.4-0ubuntu2 [1243 kB]
 96s Get:96 http://ftpmaster.internal/ubuntu questing/universe arm64 libhdf5-hl-310 arm64 1.14.5+repack-3 [59.8 kB]
 96s Get:97 http://ftpmaster.internal/ubuntu questing/universe arm64 libnetcdf22 arm64 1:4.9.3-1 [504 kB]
 96s Get:98 http://ftpmaster.internal/ubuntu questing/main arm64 libltdl7 arm64 2.5.4-4 [43.0 kB]
 96s Get:99 http://ftpmaster.internal/ubuntu questing/main arm64 libodbc2 arm64 2.3.12-2ubuntu1 [147 kB]
 96s Get:100 http://ftpmaster.internal/ubuntu questing/main arm64 unixodbc-common all 2.3.12-2ubuntu1 [9044 B]
 96s Get:101 http://ftpmaster.internal/ubuntu questing/main arm64 libodbcinst2 arm64 2.3.12-2ubuntu1 [30.3 kB]
 96s Get:102 http://ftpmaster.internal/ubuntu questing/universe arm64 libogdi4.1 arm64 4.1.1+ds-5 [217 kB]
 96s Get:103 http://ftpmaster.internal/ubuntu questing/main arm64 libopenjp2-7 arm64 2.5.3-2 [183 kB]
 96s Get:104 http://ftpmaster.internal/ubuntu questing/main arm64 libgpgmepp6t64 arm64 1.24.2-1ubuntu2 [119 kB]
 96s Get:105 http://ftpmaster.internal/ubuntu questing/main arm64 liblcms2-2 arm64 2.16-2 [170 kB]
 96s Get:106 http://ftpmaster.internal/ubuntu questing/main arm64 libpoppler147 arm64 25.03.0-3 [1152 kB]
 96s Get:107 http://ftpmaster.internal/ubuntu questing/main arm64 libpq5 arm64 17.4-1 [142 kB]
 96s Get:108 http://ftpmaster.internal/ubuntu questing/universe arm64 libqhull-r8.0 arm64 2020.2-6build1 [189 kB]
 96s Get:109 http://ftpmaster.internal/ubuntu questing/universe arm64 librttopo1 arm64 1.1.0-4 [190 kB]
 96s Get:110 http://ftpmaster.internal/ubuntu questing/universe arm64 libspatialite8t64 arm64 5.1.0-3build1 [1814 kB]
 97s Get:111 http://ftpmaster.internal/ubuntu questing/universe arm64 libxerces-c3.2t64 arm64 3.2.4+debian-1.3build1 [874 kB]
 97s Get:112 http://ftpmaster.internal/ubuntu questing/universe arm64 libgdal36 arm64 3.10.2+dfsg-1build3 [8893 kB]
 97s Get:113 http://ftpmaster.internal/ubuntu questing/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB]
 97s Get:114 http://ftpmaster.internal/ubuntu questing/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB]
 97s Get:115 http://ftpmaster.internal/ubuntu questing/main arm64 x11-common all 1:7.7+23ubuntu4 [21.8 kB]
 97s Get:116 http://ftpmaster.internal/ubuntu questing/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB]
 97s Get:117 http://ftpmaster.internal/ubuntu questing/main arm64 libicu-dev arm64 76.1-1ubuntu2 [12.2 MB]
 97s Get:118 http://ftpmaster.internal/ubuntu questing/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB]
 97s Get:119 http://ftpmaster.internal/ubuntu questing/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B]
 97s Get:120 http://ftpmaster.internal/ubuntu questing/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B]
 97s Get:121 http://ftpmaster.internal/ubuntu questing/main arm64 liblapack-dev arm64 3.12.1-2 [4439 kB]
 97s Get:122 http://ftpmaster.internal/ubuntu questing/main arm64 libncurses-dev arm64 6.5+20250216-2 [389 kB]
 97s Get:123 http://ftpmaster.internal/ubuntu questing/main arm64 libthai-data all 0.1.29-2build1 [158 kB]
 97s Get:124 http://ftpmaster.internal/ubuntu questing/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB]
 97s Get:125 http://ftpmaster.internal/ubuntu questing/main arm64 libpango-1.0-0 arm64 1.56.3-1 [238 kB]
 97s Get:126 http://ftpmaster.internal/ubuntu questing/main arm64 libpangoft2-1.0-0 arm64 1.56.3-1 [49.8 kB]
 97s Get:127 http://ftpmaster.internal/ubuntu questing/main arm64 libpangocairo-1.0-0 arm64 1.56.3-1 [27.6 kB]
 97s Get:128 http://ftpmaster.internal/ubuntu questing/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB]
 97s Get:129 http://ftpmaster.internal/ubuntu questing/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB]
 97s Get:130 http://ftpmaster.internal/ubuntu questing/main arm64 libpcre2-16-0 arm64 10.45-1 [222 kB]
 97s Get:131 http://ftpmaster.internal/ubuntu questing/main arm64 libpcre2-32-0 arm64 10.45-1 [210 kB]
 97s Get:132 http://ftpmaster.internal/ubuntu questing/main arm64 libpcre2-posix3 arm64 10.45-1 [7084 B]
 97s Get:133 http://ftpmaster.internal/ubuntu questing/main arm64 libpcre2-dev arm64 10.45-1 [768 kB]
 97s Get:134 http://ftpmaster.internal/ubuntu questing/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB]
 97s Get:135 http://ftpmaster.internal/ubuntu questing/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB]
 97s Get:136 http://ftpmaster.internal/ubuntu questing/main arm64 libpng-dev arm64 1.6.47-1.1 [269 kB]
 97s Get:137 http://ftpmaster.internal/ubuntu questing/main arm64 libreadline-dev arm64 8.2-6 [179 kB]
 97s Get:138 http://ftpmaster.internal/ubuntu questing/main arm64 libsm6 arm64 2:1.2.4-1 [16.4 kB]
 97s Get:139 http://ftpmaster.internal/ubuntu questing/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB]
 97s Get:140 http://ftpmaster.internal/ubuntu questing/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB]
 97s Get:141 http://ftpmaster.internal/ubuntu questing/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B]
 97s Get:142 http://ftpmaster.internal/ubuntu questing/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB]
 97s Get:143 http://ftpmaster.internal/ubuntu questing/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB]
 97s Get:144 http://ftpmaster.internal/ubuntu questing/main arm64 libzstd-dev arm64 1.5.6+dfsg-2 [353 kB]
 97s Get:145 http://ftpmaster.internal/ubuntu questing/main arm64 zip arm64 3.0-14ubuntu2 [173 kB]
 97s Get:146 http://ftpmaster.internal/ubuntu questing/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB]
 97s Get:147 http://ftpmaster.internal/ubuntu questing/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
 97s Get:148 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-base-core arm64 4.5.0-3 [28.7 MB]
 98s Get:149 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-littler arm64 0.3.20-2 [96.1 kB]
 98s Get:150 http://ftpmaster.internal/ubuntu questing/universe arm64 littler all 0.3.20-2 [2554 B]
 98s Get:151 http://ftpmaster.internal/ubuntu questing/main arm64 liblzma-dev arm64 5.6.4-1ubuntu1 [180 kB]
 98s Get:152 http://ftpmaster.internal/ubuntu questing/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB]
 98s Get:153 http://ftpmaster.internal/ubuntu questing/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB]
 98s Get:154 http://ftpmaster.internal/ubuntu questing/main arm64 libtirpc-dev arm64 1.3.4+ds-1.3 [201 kB]
 98s Get:155 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-base-dev all 4.5.0-3 [4188 B]
 98s Get:156 http://ftpmaster.internal/ubuntu questing/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
 98s Get:157 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-lattice arm64 0.22-6-1 [1363 kB]
 98s Get:158 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
 98s Get:159 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB]
 98s Get:160 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-r.oo all 1.27.0-1 [979 kB]
 98s Get:161 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-r.utils all 2.13.0-1 [1423 kB]
 98s Get:162 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-sp arm64 1:2.2-0+dfsg-1 [1443 kB]
 98s Get:163 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-rcpp arm64 1.0.14-1 [1978 kB]
 98s Get:164 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-terra arm64 1.8-29-1 [4100 kB]
 98s Get:165 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-raster arm64 3.6-31-1 [3149 kB]
 99s Get:166 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-sdmtools arm64 1.1-221.2-1build1 [228 kB]
 99s Preconfiguring packages ...
 99s Fetched 183 MB in 5s (37.2 MB/s)
 99s Selecting previously unselected package libisl23:arm64.
 99s (Reading database ... 
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(Reading database ... 90%
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(Reading database ... 100%
(Reading database ... 85225 files and directories currently installed.)
 99s Preparing to unpack .../000-libisl23_0.27-1_arm64.deb ...
 99s Unpacking libisl23:arm64 (0.27-1) ...
 99s Selecting previously unselected package libmpc3:arm64.
 99s Preparing to unpack .../001-libmpc3_1.3.1-1build2_arm64.deb ...
 99s Unpacking libmpc3:arm64 (1.3.1-1build2) ...
 99s Selecting previously unselected package cpp-14-aarch64-linux-gnu.
 99s Preparing to unpack .../002-cpp-14-aarch64-linux-gnu_14.2.0-19ubuntu2_arm64.deb ...
 99s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-19ubuntu2) ...
 99s Selecting previously unselected package cpp-14.
 99s Preparing to unpack .../003-cpp-14_14.2.0-19ubuntu2_arm64.deb ...
 99s Unpacking cpp-14 (14.2.0-19ubuntu2) ...
100s Selecting previously unselected package cpp-aarch64-linux-gnu.
100s Preparing to unpack .../004-cpp-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ...
100s Unpacking cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
100s Selecting previously unselected package cpp.
100s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_arm64.deb ...
100s Unpacking cpp (4:14.2.0-1ubuntu1) ...
100s Selecting previously unselected package libcc1-0:arm64.
100s Preparing to unpack .../006-libcc1-0_15-20250404-0ubuntu1_arm64.deb ...
100s Unpacking libcc1-0:arm64 (15-20250404-0ubuntu1) ...
100s Selecting previously unselected package libgomp1:arm64.
100s Preparing to unpack .../007-libgomp1_15-20250404-0ubuntu1_arm64.deb ...
100s Unpacking libgomp1:arm64 (15-20250404-0ubuntu1) ...
100s Selecting previously unselected package libitm1:arm64.
100s Preparing to unpack .../008-libitm1_15-20250404-0ubuntu1_arm64.deb ...
100s Unpacking libitm1:arm64 (15-20250404-0ubuntu1) ...
100s Selecting previously unselected package libasan8:arm64.
100s Preparing to unpack .../009-libasan8_15-20250404-0ubuntu1_arm64.deb ...
100s Unpacking libasan8:arm64 (15-20250404-0ubuntu1) ...
100s Selecting previously unselected package liblsan0:arm64.
100s Preparing to unpack .../010-liblsan0_15-20250404-0ubuntu1_arm64.deb ...
100s Unpacking liblsan0:arm64 (15-20250404-0ubuntu1) ...
100s Selecting previously unselected package libtsan2:arm64.
100s Preparing to unpack .../011-libtsan2_15-20250404-0ubuntu1_arm64.deb ...
100s Unpacking libtsan2:arm64 (15-20250404-0ubuntu1) ...
100s Selecting previously unselected package libubsan1:arm64.
100s Preparing to unpack .../012-libubsan1_15-20250404-0ubuntu1_arm64.deb ...
100s Unpacking libubsan1:arm64 (15-20250404-0ubuntu1) ...
100s Selecting previously unselected package libhwasan0:arm64.
100s Preparing to unpack .../013-libhwasan0_15-20250404-0ubuntu1_arm64.deb ...
100s Unpacking libhwasan0:arm64 (15-20250404-0ubuntu1) ...
100s Selecting previously unselected package libgcc-14-dev:arm64.
100s Preparing to unpack .../014-libgcc-14-dev_14.2.0-19ubuntu2_arm64.deb ...
100s Unpacking libgcc-14-dev:arm64 (14.2.0-19ubuntu2) ...
100s Selecting previously unselected package gcc-14-aarch64-linux-gnu.
100s Preparing to unpack .../015-gcc-14-aarch64-linux-gnu_14.2.0-19ubuntu2_arm64.deb ...
100s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-19ubuntu2) ...
100s Selecting previously unselected package gcc-14.
100s Preparing to unpack .../016-gcc-14_14.2.0-19ubuntu2_arm64.deb ...
100s Unpacking gcc-14 (14.2.0-19ubuntu2) ...
101s Selecting previously unselected package gcc-aarch64-linux-gnu.
101s Preparing to unpack .../017-gcc-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ...
101s Unpacking gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
101s Selecting previously unselected package gcc.
101s Preparing to unpack .../018-gcc_4%3a14.2.0-1ubuntu1_arm64.deb ...
101s Unpacking gcc (4:14.2.0-1ubuntu1) ...
101s Selecting previously unselected package libstdc++-14-dev:arm64.
101s Preparing to unpack .../019-libstdc++-14-dev_14.2.0-19ubuntu2_arm64.deb ...
101s Unpacking libstdc++-14-dev:arm64 (14.2.0-19ubuntu2) ...
101s Selecting previously unselected package g++-14-aarch64-linux-gnu.
101s Preparing to unpack .../020-g++-14-aarch64-linux-gnu_14.2.0-19ubuntu2_arm64.deb ...
101s Unpacking g++-14-aarch64-linux-gnu (14.2.0-19ubuntu2) ...
101s Selecting previously unselected package g++-14.
101s Preparing to unpack .../021-g++-14_14.2.0-19ubuntu2_arm64.deb ...
101s Unpacking g++-14 (14.2.0-19ubuntu2) ...
101s Selecting previously unselected package g++-aarch64-linux-gnu.
101s Preparing to unpack .../022-g++-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ...
101s Unpacking g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
101s Selecting previously unselected package g++.
101s Preparing to unpack .../023-g++_4%3a14.2.0-1ubuntu1_arm64.deb ...
101s Unpacking g++ (4:14.2.0-1ubuntu1) ...
101s Selecting previously unselected package build-essential.
101s Preparing to unpack .../024-build-essential_12.12ubuntu1_arm64.deb ...
101s Unpacking build-essential (12.12ubuntu1) ...
101s Selecting previously unselected package dctrl-tools.
101s Preparing to unpack .../025-dctrl-tools_2.24-3build3_arm64.deb ...
101s Unpacking dctrl-tools (2.24-3build3) ...
101s Selecting previously unselected package fonts-dejavu-mono.
101s Preparing to unpack .../026-fonts-dejavu-mono_2.37-8_all.deb ...
101s Unpacking fonts-dejavu-mono (2.37-8) ...
101s Selecting previously unselected package fonts-dejavu-core.
101s Preparing to unpack .../027-fonts-dejavu-core_2.37-8_all.deb ...
101s Unpacking fonts-dejavu-core (2.37-8) ...
101s Selecting previously unselected package fontconfig-config.
101s Preparing to unpack .../028-fontconfig-config_2.15.0-2.2ubuntu1_arm64.deb ...
101s Unpacking fontconfig-config (2.15.0-2.2ubuntu1) ...
101s Selecting previously unselected package libfontconfig1:arm64.
102s Preparing to unpack .../029-libfontconfig1_2.15.0-2.2ubuntu1_arm64.deb ...
102s Unpacking libfontconfig1:arm64 (2.15.0-2.2ubuntu1) ...
102s Selecting previously unselected package fontconfig.
102s Preparing to unpack .../030-fontconfig_2.15.0-2.2ubuntu1_arm64.deb ...
102s Unpacking fontconfig (2.15.0-2.2ubuntu1) ...
102s Selecting previously unselected package gdal-data.
102s Preparing to unpack .../031-gdal-data_3.10.2+dfsg-1build3_all.deb ...
102s Unpacking gdal-data (3.10.2+dfsg-1build3) ...
102s Selecting previously unselected package gdal-plugins:arm64.
102s Preparing to unpack .../032-gdal-plugins_3.10.2+dfsg-1build3_arm64.deb ...
102s Unpacking gdal-plugins:arm64 (3.10.2+dfsg-1build3) ...
102s Selecting previously unselected package libgfortran5:arm64.
102s Preparing to unpack .../033-libgfortran5_15-20250404-0ubuntu1_arm64.deb ...
102s Unpacking libgfortran5:arm64 (15-20250404-0ubuntu1) ...
102s Selecting previously unselected package libgfortran-14-dev:arm64.
102s Preparing to unpack .../034-libgfortran-14-dev_14.2.0-19ubuntu2_arm64.deb ...
102s Unpacking libgfortran-14-dev:arm64 (14.2.0-19ubuntu2) ...
102s Selecting previously unselected package gfortran-14-aarch64-linux-gnu.
102s Preparing to unpack .../035-gfortran-14-aarch64-linux-gnu_14.2.0-19ubuntu2_arm64.deb ...
102s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-19ubuntu2) ...
102s Selecting previously unselected package gfortran-14.
102s Preparing to unpack .../036-gfortran-14_14.2.0-19ubuntu2_arm64.deb ...
102s Unpacking gfortran-14 (14.2.0-19ubuntu2) ...
102s Selecting previously unselected package gfortran-aarch64-linux-gnu.
102s Preparing to unpack .../037-gfortran-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ...
102s Unpacking gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
102s Selecting previously unselected package gfortran.
102s Preparing to unpack .../038-gfortran_4%3a14.2.0-1ubuntu1_arm64.deb ...
102s Unpacking gfortran (4:14.2.0-1ubuntu1) ...
102s Selecting previously unselected package icu-devtools.
102s Preparing to unpack .../039-icu-devtools_76.1-1ubuntu2_arm64.deb ...
102s Unpacking icu-devtools (76.1-1ubuntu2) ...
102s Selecting previously unselected package libabsl20230802:arm64.
102s Preparing to unpack .../040-libabsl20230802_20230802.1-4.2_arm64.deb ...
102s Unpacking libabsl20230802:arm64 (20230802.1-4.2) ...
102s Selecting previously unselected package libaec0:arm64.
102s Preparing to unpack .../041-libaec0_1.1.3-1_arm64.deb ...
102s Unpacking libaec0:arm64 (1.1.3-1) ...
102s Selecting previously unselected package libaom3:arm64.
102s Preparing to unpack .../042-libaom3_3.12.0-1_arm64.deb ...
102s Unpacking libaom3:arm64 (3.12.0-1) ...
102s Selecting previously unselected package libblas3:arm64.
102s Preparing to unpack .../043-libblas3_3.12.1-2_arm64.deb ...
102s Unpacking libblas3:arm64 (3.12.1-2) ...
102s Selecting previously unselected package liblapack3:arm64.
102s Preparing to unpack .../044-liblapack3_3.12.1-2_arm64.deb ...
102s Unpacking liblapack3:arm64 (3.12.1-2) ...
102s Selecting previously unselected package libarpack2t64:arm64.
102s Preparing to unpack .../045-libarpack2t64_3.9.1-4_arm64.deb ...
102s Unpacking libarpack2t64:arm64 (3.9.1-4) ...
102s Selecting previously unselected package libarmadillo14.
102s Preparing to unpack .../046-libarmadillo14_1%3a14.2.3+dfsg-1_arm64.deb ...
102s Unpacking libarmadillo14 (1:14.2.3+dfsg-1) ...
102s Selecting previously unselected package libdav1d7:arm64.
102s Preparing to unpack .../047-libdav1d7_1.5.1-1_arm64.deb ...
102s Unpacking libdav1d7:arm64 (1.5.1-1) ...
102s Selecting previously unselected package libgav1-1:arm64.
102s Preparing to unpack .../048-libgav1-1_0.19.0-3_arm64.deb ...
102s Unpacking libgav1-1:arm64 (0.19.0-3) ...
102s Selecting previously unselected package librav1e0.7:arm64.
102s Preparing to unpack .../049-librav1e0.7_0.7.1-9_arm64.deb ...
102s Unpacking librav1e0.7:arm64 (0.7.1-9) ...
102s Selecting previously unselected package libsvtav1enc2:arm64.
102s Preparing to unpack .../050-libsvtav1enc2_2.3.0+dfsg-1_arm64.deb ...
102s Unpacking libsvtav1enc2:arm64 (2.3.0+dfsg-1) ...
103s Selecting previously unselected package libjpeg-turbo8:arm64.
103s Preparing to unpack .../051-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ...
103s Unpacking libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ...
103s Selecting previously unselected package libjpeg8:arm64.
103s Preparing to unpack .../052-libjpeg8_8c-2ubuntu11_arm64.deb ...
103s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ...
103s Selecting previously unselected package libyuv0:arm64.
103s Preparing to unpack .../053-libyuv0_0.0.1904.20250204-1_arm64.deb ...
103s Unpacking libyuv0:arm64 (0.0.1904.20250204-1) ...
103s Selecting previously unselected package libavif16:arm64.
103s Preparing to unpack .../054-libavif16_1.2.1-1ubuntu1_arm64.deb ...
103s Unpacking libavif16:arm64 (1.2.1-1ubuntu1) ...
103s Selecting previously unselected package libblas-dev:arm64.
103s Preparing to unpack .../055-libblas-dev_3.12.1-2_arm64.deb ...
103s Unpacking libblas-dev:arm64 (3.12.1-2) ...
103s Selecting previously unselected package libsnappy1v5:arm64.
103s Preparing to unpack .../056-libsnappy1v5_1.2.1-1_arm64.deb ...
103s Unpacking libsnappy1v5:arm64 (1.2.1-1) ...
103s Selecting previously unselected package libblosc1:arm64.
103s Preparing to unpack .../057-libblosc1_1.21.5+ds-1build1_arm64.deb ...
103s Unpacking libblosc1:arm64 (1.21.5+ds-1build1) ...
103s Selecting previously unselected package libbz2-dev:arm64.
103s Preparing to unpack .../058-libbz2-dev_1.0.8-6_arm64.deb ...
103s Unpacking libbz2-dev:arm64 (1.0.8-6) ...
103s Selecting previously unselected package libpixman-1-0:arm64.
103s Preparing to unpack .../059-libpixman-1-0_0.44.0-3_arm64.deb ...
103s Unpacking libpixman-1-0:arm64 (0.44.0-3) ...
103s Selecting previously unselected package libxcb-render0:arm64.
103s Preparing to unpack .../060-libxcb-render0_1.17.0-2_arm64.deb ...
103s Unpacking libxcb-render0:arm64 (1.17.0-2) ...
103s Selecting previously unselected package libxcb-shm0:arm64.
103s Preparing to unpack .../061-libxcb-shm0_1.17.0-2_arm64.deb ...
103s Unpacking libxcb-shm0:arm64 (1.17.0-2) ...
103s Selecting previously unselected package libxrender1:arm64.
103s Preparing to unpack .../062-libxrender1_1%3a0.9.10-1.1build1_arm64.deb ...
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104s Selecting previously unselected package libmysqlclient24:arm64.
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104s Selecting previously unselected package libodbcinst2:arm64.
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104s Selecting previously unselected package libogdi4.1:arm64.
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105s Selecting previously unselected package libspatialite8t64:arm64.
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105s Selecting previously unselected package libxerces-c3.2t64:arm64.
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105s Selecting previously unselected package libgdal36:arm64.
105s Preparing to unpack .../111-libgdal36_3.10.2+dfsg-1build3_arm64.deb ...
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105s Selecting previously unselected package libgraphite2-3:arm64.
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105s Selecting previously unselected package libharfbuzz0b:arm64.
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105s Selecting previously unselected package x11-common.
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105s Selecting previously unselected package libice6:arm64.
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106s Selecting previously unselected package libpango-1.0-0:arm64.
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106s Selecting previously unselected package libpangocairo-1.0-0:arm64.
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106s Selecting previously unselected package libpaper2:arm64.
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106s Selecting previously unselected package libpcre2-16-0:arm64.
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106s Selecting previously unselected package zlib1g-dev:arm64.
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106s Selecting previously unselected package libpng-dev:arm64.
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106s Selecting previously unselected package libxft2:arm64.
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106s Selecting previously unselected package libxss1:arm64.
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106s Selecting previously unselected package libtk8.6:arm64.
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107s Selecting previously unselected package libzstd-dev:arm64.
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107s Selecting previously unselected package xdg-utils.
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107s Selecting previously unselected package r-base-core.
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107s Selecting previously unselected package r-cran-littler.
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107s Selecting previously unselected package liblzma-dev:arm64.
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107s Selecting previously unselected package pkgconf-bin.
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107s Selecting previously unselected package libtirpc-dev:arm64.
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107s Selecting previously unselected package r-cran-lattice.
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108s Selecting previously unselected package r-cran-terra.
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108s Selecting previously unselected package r-cran-sdmtools.
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108s Unpacking r-cran-sdmtools (1.1-221.2-1build1) ...
108s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ...
108s Setting up liblcms2-2:arm64 (2.16-2) ...
108s Setting up libpixman-1-0:arm64 (0.44.0-3) ...
108s Setting up libsharpyuv0:arm64 (1.5.0-0.1) ...
108s Setting up libgpgmepp6t64:arm64 (1.24.2-1ubuntu2) ...
108s Setting up libaom3:arm64 (3.12.0-1) ...
108s Setting up mysql-common (5.8+1.1.1ubuntu1) ...
108s update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode
108s Setting up libncurses-dev:arm64 (6.5+20250216-2) ...
108s Setting up liblerc4:arm64 (4.0.0+ds-5ubuntu1) ...
108s Setting up libzstd-dev:arm64 (1.5.6+dfsg-2) ...
108s Setting up proj-data (9.5.1-1) ...
108s Setting up libxrender1:arm64 (1:0.9.10-1.1build1) ...
108s Setting up libdatrie1:arm64 (0.2.13-3build1) ...
108s Setting up libogdi4.1:arm64 (4.1.1+ds-5) ...
108s Setting up libgeos3.13.1:arm64 (3.13.1-1) ...
108s Setting up libxcb-render0:arm64 (1.17.0-2) ...
108s Setting up libgeos-c1t64:arm64 (3.13.1-1) ...
108s Setting up unzip (6.0-28ubuntu6) ...
108s Setting up x11-common (1:7.7+23ubuntu4) ...
108s Setting up libpq5:arm64 (17.4-1) ...
108s Setting up libdeflate0:arm64 (1.23-1) ...
108s Setting up libqhull-r8.0:arm64 (2020.2-6build1) ...
108s Setting up libxcb-shm0:arm64 (1.17.0-2) ...
108s Setting up libreadline-dev:arm64 (8.2-6) ...
108s Setting up libxerces-c3.2t64:arm64 (3.2.4+debian-1.3build1) ...
108s Setting up libgomp1:arm64 (15-20250404-0ubuntu1) ...
108s Setting up libmysqlclient24:arm64 (8.4.4-0ubuntu2) ...
108s Setting up libjbig0:arm64 (2.1-6.1ubuntu2) ...
108s Setting up libpcre2-16-0:arm64 (10.45-1) ...
108s Setting up libaec0:arm64 (1.1.3-1) ...
108s Setting up gdal-data (3.10.2+dfsg-1build3) ...
108s Setting up libsnappy1v5:arm64 (1.2.1-1) ...
108s Setting up zip (3.0-14ubuntu2) ...
108s Setting up libpcre2-32-0:arm64 (10.45-1) ...
108s Setting up libblas3:arm64 (3.12.1-2) ...
108s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode
108s Setting up libtirpc-dev:arm64 (1.3.4+ds-1.3) ...
108s Setting up libpkgconf3:arm64 (1.8.1-4) ...
108s Setting up libcfitsio10t64:arm64 (4.5.0-5) ...
108s Setting up libsvtav1enc2:arm64 (2.3.0+dfsg-1) ...
108s Setting up fonts-dejavu-mono (2.37-8) ...
108s Setting up libmpc3:arm64 (1.3.1-1build2) ...
108s Setting up libtcl8.6:arm64 (8.6.16+dfsg-1) ...
108s Setting up icu-devtools (76.1-1ubuntu2) ...
108s Setting up fonts-dejavu-core (2.37-8) ...
108s Setting up unixodbc-common (2.3.12-2ubuntu1) ...
108s Setting up pkgconf-bin (1.8.1-4) ...
108s Setting up libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ...
108s Setting up libltdl7:arm64 (2.5.4-4) ...
108s Setting up libgfortran5:arm64 (15-20250404-0ubuntu1) ...
108s Setting up libwebp7:arm64 (1.5.0-0.1) ...
108s Setting up liblzma-dev:arm64 (5.6.4-1ubuntu1) ...
108s Setting up libubsan1:arm64 (15-20250404-0ubuntu1) ...
108s Setting up libgif7:arm64 (5.2.2-1ubuntu2) ...
108s Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
108s Setting up libodbc2:arm64 (2.3.12-2ubuntu1) ...
108s Setting up liburiparser1:arm64 (0.9.8+dfsg-2) ...
108s Setting up libpcre2-posix3:arm64 (10.45-1) ...
108s Setting up libfyba0t64:arm64 (4.1.1-11build1) ...
108s Setting up librttopo1:arm64 (1.1.0-4) ...
108s Setting up libdav1d7:arm64 (1.5.1-1) ...
108s Setting up libminizip1t64:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
108s Setting up libhwasan0:arm64 (15-20250404-0ubuntu1) ...
108s Setting up librav1e0.7:arm64 (0.7.1-9) ...
108s Setting up libasan8:arm64 (15-20250404-0ubuntu1) ...
108s Setting up libblosc1:arm64 (1.21.5+ds-1build1) ...
108s Setting up libopenjp2-7:arm64 (2.5.3-2) ...
108s Setting up libharfbuzz0b:arm64 (10.2.0-1) ...
108s Setting up libthai-data (0.1.29-2build1) ...
108s Setting up libabsl20230802:arm64 (20230802.1-4.2) ...
108s Setting up libxss1:arm64 (1:1.2.3-1build3) ...
108s Setting up libpaper2:arm64 (2.2.5-0.3) ...
108s Setting up libtsan2:arm64 (15-20250404-0ubuntu1) ...
108s Setting up libisl23:arm64 (0.27-1) ...
108s Setting up libde265-0:arm64 (1.0.15-1build5) ...
108s Setting up libkmlbase1t64:arm64 (1.3.0-12build1) ...
108s Setting up libdeflate-dev:arm64 (1.23-1) ...
108s Setting up libicu-dev:arm64 (76.1-1ubuntu2) ...
108s Setting up xdg-utils (1.2.1-2ubuntu1) ...
108s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
108s Setting up libcc1-0:arm64 (15-20250404-0ubuntu1) ...
108s Setting up liblsan0:arm64 (15-20250404-0ubuntu1) ...
108s Setting up libblas-dev:arm64 (3.12.1-2) ...
108s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode
108s Setting up libsz2:arm64 (1.1.3-1) ...
108s Setting up dctrl-tools (2.24-3build3) ...
108s Setting up libitm1:arm64 (15-20250404-0ubuntu1) ...
108s Setting up gdal-plugins:arm64 (3.10.2+dfsg-1build3) ...
108s Setting up libbz2-dev:arm64 (1.0.8-6) ...
108s Setting up libjpeg8:arm64 (8c-2ubuntu11) ...
108s Setting up libice6:arm64 (2:1.1.1-1) ...
108s Setting up libodbcinst2:arm64 (2.3.12-2ubuntu1) ...
108s Setting up libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ...
108s Setting up liblapack3:arm64 (3.12.1-2) ...
108s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
108s Setting up libarpack2t64:arm64 (3.9.1-4) ...
108s Setting up libpcre2-dev:arm64 (10.45-1) ...
108s Setting up fontconfig-config (2.15.0-2.2ubuntu1) ...
109s Setting up libpng-dev:arm64 (1.6.47-1.1) ...
109s Setting up libpaper-utils (2.2.5-0.3) ...
109s Setting up pkgconf:arm64 (1.8.1-4) ...
109s Setting up libkmldom1t64:arm64 (1.3.0-12build1) ...
109s Setting up libthai0:arm64 (0.1.29-2build1) ...
109s Setting up liblapack-dev:arm64 (3.12.1-2) ...
109s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode
109s Setting up libgav1-1:arm64 (0.19.0-3) ...
109s Setting up libhdf4-0-alt:arm64 (4.3.0-1) ...
109s Setting up libhdf5-310:arm64 (1.14.5+repack-3) ...
109s Setting up libfreexl1:arm64 (2.0.0-1build2) ...
109s Setting up cpp-14-aarch64-linux-gnu (14.2.0-19ubuntu2) ...
109s Setting up libtiff6:arm64 (4.7.0-3ubuntu1) ...
109s Setting up libarmadillo14 (1:14.2.3+dfsg-1) ...
109s Setting up libfontconfig1:arm64 (2.15.0-2.2ubuntu1) ...
109s Setting up libgcc-14-dev:arm64 (14.2.0-19ubuntu2) ...
109s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ...
109s Setting up libstdc++-14-dev:arm64 (14.2.0-19ubuntu2) ...
109s Setting up libyuv0:arm64 (0.0.1904.20250204-1) ...
109s Setting up libsm6:arm64 (2:1.2.4-1) ...
109s Setting up libgfortran-14-dev:arm64 (14.2.0-19ubuntu2) ...
109s Setting up libhdf5-hl-310:arm64 (1.14.5+repack-3) ...
109s Setting up fontconfig (2.15.0-2.2ubuntu1) ...
111s Regenerating fonts cache... done.
111s Setting up libavif16:arm64 (1.2.1-1ubuntu1) ...
111s Setting up libxft2:arm64 (2.3.6-1build1) ...
111s Setting up libpoppler147:arm64 (25.03.0-3) ...
111s Setting up libproj25:arm64 (9.5.1-1) ...
111s Setting up libtk8.6:arm64 (8.6.16-1) ...
111s Setting up libpango-1.0-0:arm64 (1.56.3-1) ...
111s Setting up libnetcdf22:arm64 (1:4.9.3-1) ...
111s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ...
111s Setting up libkmlengine1t64:arm64 (1.3.0-12build1) ...
111s Setting up libcairo2:arm64 (1.18.4-1) ...
111s Setting up libgeotiff5:arm64 (1.7.4-1) ...
111s Setting up cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
111s Setting up libxt6t64:arm64 (1:1.2.1-1.2build1) ...
111s Setting up cpp-14 (14.2.0-19ubuntu2) ...
111s Setting up cpp (4:14.2.0-1ubuntu1) ...
111s Setting up gcc-14-aarch64-linux-gnu (14.2.0-19ubuntu2) ...
111s Setting up libpangoft2-1.0-0:arm64 (1.56.3-1) ...
111s Setting up libpangocairo-1.0-0:arm64 (1.56.3-1) ...
111s Setting up libspatialite8t64:arm64 (5.1.0-3build1) ...
111s Setting up gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
111s Setting up g++-14-aarch64-linux-gnu (14.2.0-19ubuntu2) ...
111s Setting up gcc-14 (14.2.0-19ubuntu2) ...
111s Setting up r-base-core (4.5.0-3) ...
111s Creating config file /etc/R/Renviron with new version
111s Setting up r-cran-lattice (0.22-6-1) ...
111s Setting up gfortran-14-aarch64-linux-gnu (14.2.0-19ubuntu2) ...
111s Setting up g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
111s Setting up gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ...
111s Setting up g++-14 (14.2.0-19ubuntu2) ...
111s Setting up r-cran-pkgkitten (0.2.4-1) ...
111s Setting up gfortran-14 (14.2.0-19ubuntu2) ...
111s Setting up r-cran-littler (0.3.20-2) ...
111s Setting up r-cran-rcpp (1.0.14-1) ...
111s Setting up littler (0.3.20-2) ...
111s Setting up gcc (4:14.2.0-1ubuntu1) ...
111s Setting up r-cran-r.methodss3 (1.8.2-1) ...
111s Setting up r-cran-sp (1:2.2-0+dfsg-1) ...
111s Setting up g++ (4:14.2.0-1ubuntu1) ...
111s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
111s Setting up build-essential (12.12ubuntu1) ...
111s Setting up r-cran-r.oo (1.27.0-1) ...
111s Setting up gfortran (4:14.2.0-1ubuntu1) ...
111s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
111s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
111s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
111s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
111s Setting up r-cran-r.utils (2.13.0-1) ...
111s Setting up r-base-dev (4.5.0-3) ...
111s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
111s Setting up r-cran-sdmtools (1.1-221.2-1build1) ...
111s Setting up libheif-plugin-aomdec:arm64 (1.19.7-1) ...
111s Setting up libheif-plugin-libde265:arm64 (1.19.7-1) ...
111s Setting up libheif1:arm64 (1.19.7-1) ...
111s Setting up libgdal36:arm64 (3.10.2+dfsg-1build3) ...
111s Setting up r-cran-terra (1.8-29-1) ...
111s Setting up r-cran-raster (3.6-31-1) ...
111s Processing triggers for install-info (7.1.1-1) ...
111s Processing triggers for libc-bin (2.41-6ubuntu1) ...
111s Processing triggers for man-db (2.13.0-1) ...
113s autopkgtest [16:22:58]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
113s autopkgtest [16:22:58]: test pkg-r-autopkgtest: [-----------------------
113s Test: Try to load the R library SDMTools
113s 
113s R version 4.5.0 (2025-04-11) -- "How About a Twenty-Six"
113s Copyright (C) 2025 The R Foundation for Statistical Computing
113s Platform: aarch64-unknown-linux-gnu
113s 
113s R is free software and comes with ABSOLUTELY NO WARRANTY.
113s You are welcome to redistribute it under certain conditions.
113s Type 'license()' or 'licence()' for distribution details.
113s 
113s R is a collaborative project with many contributors.
113s Type 'contributors()' for more information and
113s 'citation()' on how to cite R or R packages in publications.
113s 
113s Type 'demo()' for some demos, 'help()' for on-line help, or
113s 'help.start()' for an HTML browser interface to help.
113s Type 'q()' to quit R.
113s 
113s > library('SDMTools')
113s > 
113s Other tests are currently unsupported!
113s They will be progressively added.
114s autopkgtest [16:22:59]: test pkg-r-autopkgtest: -----------------------]
114s pkg-r-autopkgtest    PASS
114s autopkgtest [16:22:59]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
114s autopkgtest [16:22:59]: @@@@@@@@@@@@@@@@@@@@ summary
114s pkg-r-autopkgtest    PASS
118s nova [W] Using flock in prodstack7-arm64
118s Creating nova instance adt-questing-arm64-r-cran-sdmtools-20250502-162105-juju-7f2275-prod-proposed-migration-environment-21-991d48da-7136-4eec-ad36-5cf981c60f73 from image adt/ubuntu-questing-arm64-server-20250502.img (UUID 8e5d326b-32f5-49da-83ce-e406e786e537)...
118s nova [W] Timed out waiting for 08db0bef-68c2-45c1-9b1e-e04b3489c5a1 to get deleted.