0s autopkgtest [14:38:59]: starting date and time: 2025-05-02 14:38:59+0000 0s autopkgtest [14:38:59]: git checkout: 9986aa8c Merge branch 'skia/fix_network_interface' into 'ubuntu/production' 0s autopkgtest [14:38:59]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.r_6wj40m/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base,src:r-bioc-bioccheck --apt-upgrade r-bioc-oligo --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.5.0-3 r-bioc-bioccheck/1.42.1+dfsg-2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-arm64-7.secgroup --name adt-questing-arm64-r-bioc-oligo-20250502-143859-juju-7f2275-prod-proposed-migration-environment-2-b0f1150f-311f-4e5f-8143-271c34056737 --image adt/ubuntu-questing-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 123s autopkgtest [14:41:01]: testbed dpkg architecture: arm64 123s autopkgtest [14:41:02]: testbed apt version: 3.0.0 123s autopkgtest [14:41:02]: @@@@@@@@@@@@@@@@@@@@ test bed setup 123s autopkgtest [14:41:02]: testbed release detected to be: None 124s autopkgtest [14:41:03]: updating testbed package index (apt update) 125s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB] 125s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 125s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 125s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 125s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [2024 kB] 125s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [164 kB] 125s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [44.2 kB] 125s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 Packages [204 kB] 125s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 Packages [1467 kB] 125s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse arm64 Packages [14.8 kB] 126s Fetched 4028 kB in 1s (3203 kB/s) 127s Reading package lists... 128s autopkgtest [14:41:07]: upgrading testbed (apt dist-upgrade and autopurge) 128s Reading package lists... 128s Building dependency tree... 128s Reading state information... 130s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 130s Starting 2 pkgProblemResolver with broken count: 0 130s Done 131s Entering ResolveByKeep 131s 132s Calculating upgrade... 132s The following packages will be upgraded: 132s fwupd htop libftdi1-2 libfwupd3 libnpth0t64 libsensors-config libsensors5 132s liburcu8t64 mokutil mtd-utils nano usb.ids 132s 12 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 132s Need to get 6772 kB of archives. 132s After this operation, 736 kB of additional disk space will be used. 132s Get:1 http://ftpmaster.internal/ubuntu questing/main arm64 libnpth0t64 arm64 1.8-3 [8818 B] 132s Get:2 http://ftpmaster.internal/ubuntu questing/main arm64 libsensors-config all 1:3.6.2-2 [6756 B] 132s Get:3 http://ftpmaster.internal/ubuntu questing/main arm64 libsensors5 arm64 1:3.6.2-2 [28.9 kB] 132s Get:4 http://ftpmaster.internal/ubuntu questing/main arm64 liburcu8t64 arm64 0.15.2-2 [64.2 kB] 132s Get:5 http://ftpmaster.internal/ubuntu questing/main arm64 nano arm64 8.4-1 [290 kB] 133s Get:6 http://ftpmaster.internal/ubuntu questing/main arm64 usb.ids all 2025.04.01-1 [223 kB] 133s Get:7 http://ftpmaster.internal/ubuntu questing/main arm64 fwupd arm64 2.0.8-3 [5315 kB] 135s Get:8 http://ftpmaster.internal/ubuntu questing/main arm64 libfwupd3 arm64 2.0.8-3 [131 kB] 135s Get:9 http://ftpmaster.internal/ubuntu questing/main arm64 htop arm64 3.4.1-4 [177 kB] 135s Get:10 http://ftpmaster.internal/ubuntu questing/main arm64 libftdi1-2 arm64 1.5-10 [30.6 kB] 135s Get:11 http://ftpmaster.internal/ubuntu questing/main arm64 mokutil arm64 0.7.2-1 [28.4 kB] 135s Get:12 http://ftpmaster.internal/ubuntu questing/main arm64 mtd-utils arm64 1:2.3.0-1ubuntu1 [469 kB] 136s Fetched 6772 kB in 3s (2440 kB/s) 136s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117820 files and directories currently installed.) 136s Preparing to unpack .../libnpth0t64_1.8-3_arm64.deb ... 136s Unpacking libnpth0t64:arm64 (1.8-3) over (1.8-2) ... 136s Setting up libnpth0t64:arm64 (1.8-3) ... 136s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117820 files and directories currently installed.) 136s Preparing to unpack .../00-libsensors-config_1%3a3.6.2-2_all.deb ... 136s Unpacking libsensors-config (1:3.6.2-2) over (1:3.6.0-10) ... 136s Preparing to unpack .../01-libsensors5_1%3a3.6.2-2_arm64.deb ... 136s Unpacking libsensors5:arm64 (1:3.6.2-2) over (1:3.6.0-10) ... 137s Preparing to unpack .../02-liburcu8t64_0.15.2-2_arm64.deb ... 137s Unpacking liburcu8t64:arm64 (0.15.2-2) over (0.15.1-1) ... 137s Preparing to unpack .../03-nano_8.4-1_arm64.deb ... 137s Unpacking nano (8.4-1) over (8.3-1) ... 137s Preparing to unpack .../04-usb.ids_2025.04.01-1_all.deb ... 137s Unpacking usb.ids (2025.04.01-1) over (2025.01.14-1) ... 137s Preparing to unpack .../05-fwupd_2.0.8-3_arm64.deb ... 137s Unpacking fwupd (2.0.8-3) over (2.0.7-1) ... 138s Preparing to unpack .../06-libfwupd3_2.0.8-3_arm64.deb ... 138s Unpacking libfwupd3:arm64 (2.0.8-3) over (2.0.7-1) ... 138s Preparing to unpack .../07-htop_3.4.1-4_arm64.deb ... 138s Unpacking htop (3.4.1-4) over (3.4.0-2) ... 138s Preparing to unpack .../08-libftdi1-2_1.5-10_arm64.deb ... 138s Unpacking libftdi1-2:arm64 (1.5-10) over (1.5-8build1) ... 138s Preparing to unpack .../09-mokutil_0.7.2-1_arm64.deb ... 138s Unpacking mokutil (0.7.2-1) over (0.6.0-2build3) ... 138s Preparing to unpack .../10-mtd-utils_1%3a2.3.0-1ubuntu1_arm64.deb ... 138s Unpacking mtd-utils (1:2.3.0-1ubuntu1) over (1:2.2.0-2ubuntu2) ... 138s Setting up liburcu8t64:arm64 (0.15.2-2) ... 138s Setting up mokutil (0.7.2-1) ... 138s Setting up htop (3.4.1-4) ... 138s Setting up libsensors-config (1:3.6.2-2) ... 138s Installing new version of config file /etc/sensors3.conf ... 138s Setting up libfwupd3:arm64 (2.0.8-3) ... 138s Setting up mtd-utils (1:2.3.0-1ubuntu1) ... 138s Setting up libftdi1-2:arm64 (1.5-10) ... 138s Setting up usb.ids (2025.04.01-1) ... 138s Setting up libsensors5:arm64 (1:3.6.2-2) ... 138s Setting up nano (8.4-1) ... 138s Installing new version of config file /etc/nanorc ... 138s Setting up fwupd (2.0.8-3) ... 139s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 139s fwupd.service is a disabled or a static unit not running, not starting it. 139s Processing triggers for man-db (2.13.0-1) ... 140s Processing triggers for dbus (1.16.2-2ubuntu1) ... 140s Processing triggers for install-info (7.1.1-1) ... 141s Processing triggers for libc-bin (2.41-6ubuntu1) ... 141s Reading package lists... 142s Building dependency tree... 142s Reading state information... 143s Starting pkgProblemResolver with broken count: 0 143s Starting 2 pkgProblemResolver with broken count: 0 143s Done 144s Solving dependencies... 145s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 145s autopkgtest [14:41:24]: rebooting testbed after setup commands that affected boot 168s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 175s autopkgtest [14:41:54]: testbed running kernel: Linux 6.14.0-15-generic #15-Ubuntu SMP PREEMPT_DYNAMIC Sun Apr 6 14:37:51 UTC 2025 177s autopkgtest [14:41:56]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-oligo 179s Get:1 http://ftpmaster.internal/ubuntu questing/universe r-bioc-oligo 1.70.0+ds-2 (dsc) [2274 B] 179s Get:2 http://ftpmaster.internal/ubuntu questing/universe r-bioc-oligo 1.70.0+ds-2 (tar) [178 kB] 179s Get:3 http://ftpmaster.internal/ubuntu questing/universe r-bioc-oligo 1.70.0+ds-2 (diff) [4724 B] 180s gpgv: Signature made Mon Jan 13 14:20:42 2025 UTC 180s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 180s gpgv: issuer "crusoe@debian.org" 180s gpgv: Can't check signature: No public key 180s dpkg-source: warning: cannot verify inline signature for ./r-bioc-oligo_1.70.0+ds-2.dsc: no acceptable signature found 180s autopkgtest [14:41:59]: testing package r-bioc-oligo version 1.70.0+ds-2 180s autopkgtest [14:41:59]: build not needed 182s autopkgtest [14:42:01]: test pkg-r-autopkgtest: preparing testbed 182s Reading package lists... 183s Building dependency tree... 183s Reading state information... 183s Starting pkgProblemResolver with broken count: 34 183s Starting 2 pkgProblemResolver with broken count: 34 183s Investigating (0) r-cran-tibble:arm64 < none -> 3.2.1+dfsg-3 @un puN Ib > 183s Broken r-cran-tibble:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.0.2) 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-tibble:arm64 160 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-tibble:arm64 160 183s Investigating (0) r-cran-vctrs:arm64 < none -> 0.6.5-1 @un puN Ib > 183s Broken r-cran-vctrs:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.1.0) 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-vctrs:arm64 129 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-vctrs:arm64 129 183s Investigating (0) r-cran-htmltools:arm64 < none -> 0.5.8.1-1 @un puN Ib > 183s Broken r-cran-htmltools:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.0.0) 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-htmltools:arm64 89 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-htmltools:arm64 89 183s Investigating (0) r-cran-shiny:arm64 < none -> 1.10.0+dfsg-2 @un puN Ib > 183s Broken r-cran-shiny:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 0.4.10) 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-shiny:arm64 88 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-shiny:arm64 88 183s Investigating (0) r-cran-sass:arm64 < none -> 0.4.9+dfsg-1 @un puN Ib > 183s Broken r-cran-sass:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 0.4.10) 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-sass:arm64 85 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-sass:arm64 85 183s Investigating (0) r-cran-bslib:arm64 < none -> 0.9.0+dfsg-1syncable1 @un puN Ib > 183s Broken r-cran-bslib:arm64 Depends on r-cran-rlang:arm64 < none @un pH > 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-bslib:arm64 82 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-bslib:arm64 82 183s Investigating (0) r-cran-lifecycle:arm64 < none -> 1.0.4+dfsg-1 @un puN Ib > 183s Broken r-cran-lifecycle:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.1.0) 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-lifecycle:arm64 80 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-lifecycle:arm64 80 183s Investigating (0) r-cran-xml2:arm64 < none -> 1.3.8-1 @un puN Ib > 183s Broken r-cran-xml2:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.1.0) 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-xml2:arm64 77 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-xml2:arm64 77 183s Investigating (0) r-cran-dplyr:arm64 < none -> 1.1.4-4 @un puN Ib > 183s Broken r-cran-dplyr:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.1.0) 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-dplyr:arm64 71 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-dplyr:arm64 71 183s Investigating (0) r-cran-rsqlite:arm64 < none -> 2.3.9-1 @un puN Ib > 183s Broken r-cran-rsqlite:arm64 Depends on r-cran-rlang:arm64 < none @un pH > 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-rsqlite:arm64 57 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-rsqlite:arm64 57 183s Investigating (0) r-cran-pillar:arm64 < none -> 1.10.1+dfsg-1 @un puN Ib > 183s Broken r-cran-pillar:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.0.2) 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-pillar:arm64 50 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-pillar:arm64 50 183s Investigating (0) r-cran-fontawesome:arm64 < none -> 0.5.3-1 @un puN Ib > 183s Broken r-cran-fontawesome:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.0.6) 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-fontawesome:arm64 44 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-fontawesome:arm64 44 183s Investigating (0) r-cran-purrr:arm64 < none -> 1.0.4-1 @un puN Ib > 183s Broken r-cran-purrr:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.1.1) 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-purrr:arm64 34 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-purrr:arm64 34 183s Investigating (0) r-cran-tidyr:arm64 < none -> 1.3.1-1 @un puN Ib > 183s Broken r-cran-tidyr:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.1.1) 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-tidyr:arm64 28 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-tidyr:arm64 28 183s Investigating (0) r-cran-later:arm64 < none -> 1.4.1+dfsg-1 @un puN Ib > 183s Broken r-cran-later:arm64 Depends on r-cran-rlang:arm64 < none @un pH > 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-later:arm64 25 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-later:arm64 25 183s Investigating (0) r-cran-blob:arm64 < none -> 1.2.4-1 @un puN Ib > 183s Broken r-cran-blob:arm64 Depends on r-cran-rlang:arm64 < none @un pH > 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-blob:arm64 25 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-blob:arm64 25 183s Investigating (0) r-cran-hms:arm64 < none -> 1.1.3-1 @un puN Ib > 183s Broken r-cran-hms:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.0.2) 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-hms:arm64 25 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-hms:arm64 25 183s Investigating (0) r-cran-tidyselect:arm64 < none -> 1.2.1+dfsg-1 @un puN Ib > 183s Broken r-cran-tidyselect:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.0.4) 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-tidyselect:arm64 20 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-tidyselect:arm64 20 183s Investigating (0) r-cran-memoise:arm64 < none -> 2.0.1-1 @un puN Ib > 183s Broken r-cran-memoise:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 0.4.10) 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-memoise:arm64 11 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-memoise:arm64 11 183s Investigating (0) r-cran-cachem:arm64 < none -> 1.1.0-1 @un puN Ib > 183s Broken r-cran-cachem:arm64 Depends on r-cran-rlang:arm64 < none @un pH > 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-cachem:arm64 11 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-cachem:arm64 11 183s Investigating (0) r-cran-dbplyr:arm64 < none -> 2.5.0+dfsg-1 @un puN Ib > 183s Broken r-cran-dbplyr:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.1.1) 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-dbplyr:arm64 11 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-dbplyr:arm64 11 183s Investigating (0) r-cran-promises:arm64 < none -> 1.3.2+dfsg-1 @un puN Ib > 183s Broken r-cran-promises:arm64 Depends on r-cran-rlang:arm64 < none @un pH > 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-promises:arm64 10 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-promises:arm64 10 183s Investigating (0) r-cran-stringr:arm64 < none -> 1.5.1-1 @un puN Ib > 183s Broken r-cran-stringr:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.0.0) 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-stringr:arm64 8 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-stringr:arm64 8 183s Investigating (0) r-bioc-annotationdbi:arm64 < none -> 1.68.0-2 @un puN Ib > 183s Broken r-bioc-annotationdbi:arm64 Depends on r-bioc-iranges:arm64 < none @un pH > 183s Considering r-bioc-iranges:arm64 3 as a solution to r-bioc-annotationdbi:arm64 6 183s Considering r-bioc-iranges:arm64 3 as a solution to r-bioc-annotationdbi:arm64 6 183s Investigating (0) r-bioc-genomeinfodb:arm64 < none -> 1.42.3+dfsg-1 @un puN Ib > 183s Broken r-bioc-genomeinfodb:arm64 Depends on r-bioc-iranges:arm64 < none @un pH > (>= 2.13.12) 183s Considering r-bioc-iranges:arm64 3 as a solution to r-bioc-genomeinfodb:arm64 5 183s Considering r-bioc-iranges:arm64 3 as a solution to r-bioc-genomeinfodb:arm64 5 183s Investigating (0) r-bioc-xvector:arm64 < none -> 0.46.0-2 @un puN Ib > 183s Broken r-bioc-xvector:arm64 Depends on r-bioc-iranges:arm64 < none @un pH > (>= 2.23.9) 183s Considering r-bioc-iranges:arm64 3 as a solution to r-bioc-xvector:arm64 5 183s Considering r-bioc-iranges:arm64 3 as a solution to r-bioc-xvector:arm64 5 183s Investigating (0) r-bioc-biostrings:arm64 < none -> 2.74.1+dfsg-2 @un puN Ib > 183s Broken r-bioc-biostrings:arm64 Depends on r-bioc-iranges:arm64 < none @un pH > (>= 2.31.2) 183s Considering r-bioc-iranges:arm64 3 as a solution to r-bioc-biostrings:arm64 2 183s Considering r-bioc-iranges:arm64 3 as a solution to r-bioc-biostrings:arm64 2 183s Investigating (0) r-bioc-s4arrays:arm64 < none -> 1.6.0+dfsg-2 @un puN Ib > 183s Broken r-bioc-s4arrays:arm64 Depends on r-bioc-iranges:arm64 < none @un pH > 183s Considering r-bioc-iranges:arm64 3 as a solution to r-bioc-s4arrays:arm64 2 183s Considering r-bioc-iranges:arm64 3 as a solution to r-bioc-s4arrays:arm64 2 183s Investigating (0) r-cran-httr2:arm64 < none -> 1.1.1-1 @un puN Ib > 183s Broken r-cran-httr2:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.1.0) 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-httr2:arm64 1 183s Considering r-cran-rlang:arm64 11 as a solution to r-cran-httr2:arm64 1 183s Investigating (0) r-bioc-genomicranges:arm64 < none -> 1.58.0+dfsg-2 @un puN Ib > 183s Broken r-bioc-genomicranges:arm64 Depends on r-bioc-iranges:arm64 < none @un pH > (>= 2.37.1) 183s Considering r-bioc-iranges:arm64 3 as a solution to r-bioc-genomicranges:arm64 1 183s Considering r-bioc-iranges:arm64 3 as a solution to r-bioc-genomicranges:arm64 1 183s Investigating (0) r-bioc-oligoclasses:arm64 < none -> 1.68.0-2 @un puN Ib > 183s Broken r-bioc-oligoclasses:arm64 Depends on r-bioc-iranges:arm64 < none @un pH > (>= 2.5.17) 183s Considering r-bioc-iranges:arm64 3 as a solution to r-bioc-oligoclasses:arm64 0 183s Considering r-bioc-iranges:arm64 3 as a solution to r-bioc-oligoclasses:arm64 0 183s Investigating (0) r-bioc-delayedarray:arm64 < none -> 0.32.0+dfsg-2 @un puN Ib > 183s Broken r-bioc-delayedarray:arm64 Depends on r-bioc-iranges:arm64 < none @un pH > (>= 2.17.3) 183s Considering r-bioc-iranges:arm64 3 as a solution to r-bioc-delayedarray:arm64 0 183s Considering r-bioc-iranges:arm64 3 as a solution to r-bioc-delayedarray:arm64 0 183s Investigating (0) r-bioc-summarizedexperiment:arm64 < none -> 1.36.0+dfsg-2 @un puN Ib > 183s Broken r-bioc-summarizedexperiment:arm64 Depends on r-bioc-iranges:arm64 < none @un pH > (>= 2.23.9) 183s Considering r-bioc-iranges:arm64 3 as a solution to r-bioc-summarizedexperiment:arm64 0 183s Considering r-bioc-iranges:arm64 3 as a solution to r-bioc-summarizedexperiment:arm64 0 183s Investigating (0) r-bioc-sparsearray:arm64 < none -> 1.6.2+dfsg-1 @un puN Ib > 183s Broken r-bioc-sparsearray:arm64 Depends on r-bioc-iranges:arm64 < none @un pH > 183s Considering r-bioc-iranges:arm64 3 as a solution to r-bioc-sparsearray:arm64 0 183s Considering r-bioc-iranges:arm64 3 as a solution to r-bioc-sparsearray:arm64 0 183s Done 183s Some packages could not be installed. This may mean that you have 183s requested an impossible situation or if you are using the unstable 183s distribution that some required packages have not yet been created 183s or been moved out of Incoming. 183s The following information may help to resolve the situation: 183s 183s The following packages have unmet dependencies: 184s r-bioc-annotationdbi : Depends: r-bioc-iranges but it is not installable 184s r-bioc-biostrings : Depends: r-bioc-iranges (>= 2.31.2) but it is not installable 184s r-bioc-delayedarray : Depends: r-bioc-iranges (>= 2.17.3) but it is not installable 184s r-bioc-genomeinfodb : Depends: r-bioc-iranges (>= 2.13.12) but it is not installable 184s r-bioc-genomicranges : Depends: r-bioc-iranges (>= 2.37.1) but it is not installable 184s r-bioc-oligoclasses : Depends: r-bioc-iranges (>= 2.5.17) but it is not installable 184s r-bioc-s4arrays : Depends: r-bioc-iranges but it is not installable 184s r-bioc-sparsearray : Depends: r-bioc-iranges but it is not installable 184s r-bioc-summarizedexperiment : Depends: r-bioc-iranges (>= 2.23.9) but it is not installable 184s r-bioc-xvector : Depends: r-bioc-iranges (>= 2.23.9) but it is not installable 184s r-cran-blob : Depends: r-cran-rlang but it is not installable 184s r-cran-bslib : Depends: r-cran-rlang but it is not installable 184s r-cran-cachem : Depends: r-cran-rlang but it is not installable 184s r-cran-dbplyr : Depends: r-cran-rlang (>= 1.1.1) but it is not installable 184s r-cran-dplyr : Depends: r-cran-rlang (>= 1.1.0) but it is not installable 184s r-cran-fontawesome : Depends: r-cran-rlang (>= 1.0.6) but it is not installable 184s r-cran-hms : Depends: r-cran-rlang (>= 1.0.2) but it is not installable 184s r-cran-htmltools : Depends: r-cran-rlang (>= 1.0.0) but it is not installable 184s r-cran-httr2 : Depends: r-cran-rlang (>= 1.1.0) but it is not installable 184s r-cran-later : Depends: r-cran-rlang but it is not installable 184s r-cran-lifecycle : Depends: r-cran-rlang (>= 1.1.0) but it is not installable 184s r-cran-memoise : Depends: r-cran-rlang (>= 0.4.10) but it is not installable 184s r-cran-pillar : Depends: r-cran-rlang (>= 1.0.2) but it is not installable 184s r-cran-promises : Depends: r-cran-rlang but it is not installable 184s r-cran-purrr : Depends: r-cran-rlang (>= 1.1.1) but it is not installable 184s r-cran-rsqlite : Depends: r-cran-rlang but it is not installable 184s r-cran-sass : Depends: r-cran-rlang (>= 0.4.10) but it is not installable 184s r-cran-shiny : Depends: r-cran-rlang (>= 0.4.10) but it is not installable 184s r-cran-stringr : Depends: r-cran-rlang (>= 1.0.0) but it is not installable 184s r-cran-tibble : Depends: r-cran-rlang (>= 1.0.2) but it is not installable 184s r-cran-tidyr : Depends: r-cran-rlang (>= 1.1.1) but it is not installable 184s r-cran-tidyselect : Depends: r-cran-rlang (>= 1.0.4) but it is not installable 184s r-cran-vctrs : Depends: r-cran-rlang (>= 1.1.0) but it is not installable 184s r-cran-xml2 : Depends: r-cran-rlang (>= 1.1.0) but it is not installable 184s E: Unable to correct problems, you have held broken packages. 184s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from questing-proposed 184s Reading package lists... 184s Building dependency tree... 184s Reading state information... 185s Starting pkgProblemResolver with broken count: 0 185s Starting 2 pkgProblemResolver with broken count: 0 185s Done 186s The following NEW packages will be installed: 186s build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu 186s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 186s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 186s g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14 186s gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14 186s gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 186s javascript-common libasan8 libbibtex-parser-perl libblas-dev libblas3 186s libbz2-dev libcairo2 libcc1-0 libdatrie1 libdeflate-dev libdeflate0 186s libfontconfig1 libgcc-14-dev libgfortran-14-dev libgfortran5 libgomp1 186s libgraphite2-3 libharfbuzz0b libhwasan0 libice6 libicu-dev libio-string-perl 186s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 186s libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 186s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 186s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 186s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 186s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 186s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 186s liblsan0 liblua5.4-0 liblzma-dev libmpc3 libmpfi0 libncurses-dev 186s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 186s libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 186s libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libptexenc1 libreadline-dev 186s libsharpyuv0 libsm6 libstdc++-14-dev libsynctex2 libtcl8.6 libteckit0 186s libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 186s libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 186s libxpm4 libxrender1 libxss1 libxt6t64 libzstd-dev libzzip-0-13t64 littler 186s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 186s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 186s r-bioc-affxparser r-bioc-affyio r-bioc-annotate r-bioc-annotationdbi 186s r-bioc-biobase r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocstyle 186s r-bioc-biocversion r-bioc-biomart r-bioc-biostrings r-bioc-delayedarray 186s r-bioc-genefilter r-bioc-genomeinfodb r-bioc-genomeinfodbdata 186s r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest r-bioc-limma 186s r-bioc-matrixgenerics r-bioc-oligo r-bioc-oligoclasses r-bioc-preprocesscore 186s r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 186s r-bioc-summarizedexperiment r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc 186s r-cran-abind r-cran-askpass r-cran-base64enc r-cran-biocmanager r-cran-bit 186s r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-bslib 186s r-cran-cachem r-cran-cli r-cran-codetools r-cran-commonmark r-cran-cpp11 186s r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-digest 186s r-cran-dplyr r-cran-evaluate r-cran-fansi r-cran-fastmap r-cran-ff 186s r-cran-filelock r-cran-fontawesome r-cran-foreach r-cran-fs r-cran-generics 186s r-cran-glue r-cran-highr r-cran-hms r-cran-htmltools r-cran-httpuv 186s r-cran-httr r-cran-httr2 r-cran-iterators r-cran-jquerylib r-cran-jsonlite 186s r-cran-knitr r-cran-later r-cran-lattice r-cran-lifecycle r-cran-littler 186s r-cran-magrittr r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mime 186s r-cran-openssl r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr 186s r-cran-png r-cran-prettyunits r-cran-progress r-cran-promises r-cran-purrr 186s r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl 186s r-cran-rlang r-cran-rmarkdown r-cran-rsqlite r-cran-runit r-cran-sass 186s r-cran-shiny r-cran-sourcetools r-cran-statmod r-cran-stringi r-cran-stringr 186s r-cran-survival r-cran-sys r-cran-tibble r-cran-tidyr r-cran-tidyselect 186s r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-withr r-cran-xfun r-cran-xml 186s r-cran-xml2 r-cran-xtable r-cran-yaml t1utils tex-common texlive-base 186s texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common 186s xdg-utils zip zlib1g-dev 186s The following packages will be upgraded: 186s gcc-14-base gcc-15-base libatomic1 libgcc-s1 libstdc++6 libtirpc-common 186s libtirpc3t64 libzstd1 zstd 186s 9 upgraded, 269 newly installed, 0 to remove and 93 not upgraded. 186s Need to get 410 MB of archives. 186s After this operation, 1166 MB of additional disk space will be used. 186s Get:1 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 gcc-15-base arm64 15.1.0-1ubuntu1 [54.5 kB] 186s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libgcc-s1 arm64 15.1.0-1ubuntu1 [61.0 kB] 186s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libatomic1 arm64 15.1.0-1ubuntu1 [11.3 kB] 186s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libstdc++6 arm64 15.1.0-1ubuntu1 [761 kB] 187s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libzstd1 arm64 1.5.7+dfsg-1 [283 kB] 187s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 gcc-14-base arm64 14.2.0-22ubuntu1 [55.2 kB] 187s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libtirpc-common all 1.3.6+ds-1 [8198 B] 187s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libtirpc3t64 arm64 1.3.6+ds-1 [83.9 kB] 187s Get:9 http://ftpmaster.internal/ubuntu questing/main arm64 libisl23 arm64 0.27-1 [676 kB] 187s Get:10 http://ftpmaster.internal/ubuntu questing/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB] 187s Get:11 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-22ubuntu1 [10.6 MB] 189s Get:12 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 cpp-14 arm64 14.2.0-22ubuntu1 [1030 B] 189s Get:13 http://ftpmaster.internal/ubuntu questing/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [5558 B] 189s Get:14 http://ftpmaster.internal/ubuntu questing/main arm64 cpp arm64 4:14.2.0-1ubuntu1 [22.4 kB] 189s Get:15 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libcc1-0 arm64 15.1.0-1ubuntu1 [49.1 kB] 189s Get:16 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libgomp1 arm64 15.1.0-1ubuntu1 [147 kB] 189s Get:17 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libitm1 arm64 15.1.0-1ubuntu1 [28.1 kB] 189s Get:18 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libasan8 arm64 15.1.0-1ubuntu1 [2922 kB] 189s Get:19 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 liblsan0 arm64 15.1.0-1ubuntu1 [1317 kB] 189s Get:20 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libtsan2 arm64 15.1.0-1ubuntu1 [2691 kB] 189s Get:21 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libubsan1 arm64 15.1.0-1ubuntu1 [1176 kB] 189s Get:22 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libhwasan0 arm64 15.1.0-1ubuntu1 [1639 kB] 189s Get:23 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libgcc-14-dev arm64 14.2.0-22ubuntu1 [2593 kB] 190s Get:24 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-22ubuntu1 [20.9 MB] 190s Get:25 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 gcc-14 arm64 14.2.0-22ubuntu1 [536 kB] 190s Get:26 http://ftpmaster.internal/ubuntu questing/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1200 B] 190s Get:27 http://ftpmaster.internal/ubuntu questing/main arm64 gcc arm64 4:14.2.0-1ubuntu1 [4998 B] 190s Get:28 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libstdc++-14-dev arm64 14.2.0-22ubuntu1 [2820 kB] 191s Get:29 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-22ubuntu1 [12.1 MB] 191s Get:30 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 g++-14 arm64 14.2.0-22ubuntu1 [24.0 kB] 191s Get:31 http://ftpmaster.internal/ubuntu questing/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [956 B] 191s Get:32 http://ftpmaster.internal/ubuntu questing/main arm64 g++ arm64 4:14.2.0-1ubuntu1 [1080 B] 191s Get:33 http://ftpmaster.internal/ubuntu questing/main arm64 build-essential arm64 12.12ubuntu1 [5082 B] 191s Get:34 http://ftpmaster.internal/ubuntu questing/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB] 191s Get:35 http://ftpmaster.internal/ubuntu questing/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 191s Get:36 http://ftpmaster.internal/ubuntu questing/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 191s Get:37 http://ftpmaster.internal/ubuntu questing/main arm64 fontconfig-config arm64 2.15.0-2.2ubuntu1 [37.9 kB] 191s Get:38 http://ftpmaster.internal/ubuntu questing/main arm64 libfontconfig1 arm64 2.15.0-2.2ubuntu1 [144 kB] 191s Get:39 http://ftpmaster.internal/ubuntu questing/main arm64 fontconfig arm64 2.15.0-2.2ubuntu1 [191 kB] 191s Get:40 http://ftpmaster.internal/ubuntu questing/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 191s Get:41 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-4 [119 kB] 191s Get:42 http://ftpmaster.internal/ubuntu questing/universe arm64 fonts-lmodern all 2.005-1 [4799 kB] 191s Get:43 http://ftpmaster.internal/ubuntu questing/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 191s Get:44 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libgfortran5 arm64 15.1.0-1ubuntu1 [444 kB] 192s Get:45 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libgfortran-14-dev arm64 14.2.0-22ubuntu1 [498 kB] 192s Get:46 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-22ubuntu1 [11.4 MB] 192s Get:47 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 gfortran-14 arm64 14.2.0-22ubuntu1 [14.4 kB] 192s Get:48 http://ftpmaster.internal/ubuntu questing/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1022 B] 192s Get:49 http://ftpmaster.internal/ubuntu questing/main arm64 gfortran arm64 4:14.2.0-1ubuntu1 [1166 B] 192s Get:50 http://ftpmaster.internal/ubuntu questing/main arm64 icu-devtools arm64 76.1-1ubuntu2 [213 kB] 192s Get:51 http://ftpmaster.internal/ubuntu questing/main arm64 javascript-common all 12 [5216 B] 192s Get:52 http://ftpmaster.internal/ubuntu questing/main arm64 libio-string-perl all 1.08-4 [11.1 kB] 192s Get:53 http://ftpmaster.internal/ubuntu questing/universe arm64 liblatex-tounicode-perl all 0.55-1 [28.8 kB] 192s Get:54 http://ftpmaster.internal/ubuntu questing/universe arm64 libbibtex-parser-perl all 1.05+dfsg-1 [16.5 kB] 192s Get:55 http://ftpmaster.internal/ubuntu questing/main arm64 libblas3 arm64 3.12.1-2 [161 kB] 192s Get:56 http://ftpmaster.internal/ubuntu questing/main arm64 libblas-dev arm64 3.12.1-2 [126 kB] 192s Get:57 http://ftpmaster.internal/ubuntu questing/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB] 192s Get:58 http://ftpmaster.internal/ubuntu questing/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 192s Get:59 http://ftpmaster.internal/ubuntu questing/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 192s Get:60 http://ftpmaster.internal/ubuntu questing/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 192s Get:61 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libxrender1 arm64 1:0.9.12-1 [19.5 kB] 192s Get:62 http://ftpmaster.internal/ubuntu questing/main arm64 libcairo2 arm64 1.18.4-1 [560 kB] 192s Get:63 http://ftpmaster.internal/ubuntu questing/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 192s Get:64 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libdeflate0 arm64 1.23-2 [46.4 kB] 192s Get:65 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libdeflate-dev arm64 1.23-2 [53.6 kB] 192s Get:66 http://ftpmaster.internal/ubuntu questing/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 192s Get:67 http://ftpmaster.internal/ubuntu questing/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB] 192s Get:68 http://ftpmaster.internal/ubuntu questing/main arm64 x11-common all 1:7.7+23ubuntu4 [21.8 kB] 192s Get:69 http://ftpmaster.internal/ubuntu questing/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 192s Get:70 http://ftpmaster.internal/ubuntu questing/main arm64 libicu-dev arm64 76.1-1ubuntu2 [12.2 MB] 193s Get:71 http://ftpmaster.internal/ubuntu questing/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB] 193s Get:72 http://ftpmaster.internal/ubuntu questing/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB] 193s Get:73 http://ftpmaster.internal/ubuntu questing/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 193s Get:74 http://ftpmaster.internal/ubuntu questing/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 193s Get:75 http://ftpmaster.internal/ubuntu questing/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 193s Get:76 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 libjs-bootstrap all 3.4.1+dfsg-4 [129 kB] 193s Get:77 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 193s Get:78 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB] 193s Get:79 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 193s Get:80 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 193s Get:81 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 193s Get:82 http://ftpmaster.internal/ubuntu questing/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 193s Get:83 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 193s Get:84 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 193s Get:85 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 193s Get:86 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 193s Get:87 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 193s Get:88 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 193s Get:89 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 193s Get:90 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 193s Get:91 http://ftpmaster.internal/ubuntu questing/universe arm64 libkpathsea6 arm64 2024.20240313.70630+ds-6 [64.4 kB] 193s Get:92 http://ftpmaster.internal/ubuntu questing/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB] 193s Get:93 http://ftpmaster.internal/ubuntu questing/main arm64 liblapack-dev arm64 3.12.1-2 [4439 kB] 193s Get:94 http://ftpmaster.internal/ubuntu questing/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 193s Get:95 http://ftpmaster.internal/ubuntu questing/main arm64 liblua5.4-0 arm64 5.4.7-1 [158 kB] 194s Get:96 http://ftpmaster.internal/ubuntu questing/universe arm64 libmpfi0 arm64 1.5.4+ds-4 [35.3 kB] 194s Get:97 http://ftpmaster.internal/ubuntu questing/main arm64 libncurses-dev arm64 6.5+20250216-2 [389 kB] 194s Get:98 http://ftpmaster.internal/ubuntu questing/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 194s Get:99 http://ftpmaster.internal/ubuntu questing/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 194s Get:100 http://ftpmaster.internal/ubuntu questing/main arm64 libpango-1.0-0 arm64 1.56.3-1 [238 kB] 194s Get:101 http://ftpmaster.internal/ubuntu questing/main arm64 libpangoft2-1.0-0 arm64 1.56.3-1 [49.8 kB] 194s Get:102 http://ftpmaster.internal/ubuntu questing/main arm64 libpangocairo-1.0-0 arm64 1.56.3-1 [27.6 kB] 194s Get:103 http://ftpmaster.internal/ubuntu questing/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB] 194s Get:104 http://ftpmaster.internal/ubuntu questing/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB] 194s Get:105 http://ftpmaster.internal/ubuntu questing/main arm64 libpcre2-16-0 arm64 10.45-1 [222 kB] 194s Get:106 http://ftpmaster.internal/ubuntu questing/main arm64 libpcre2-32-0 arm64 10.45-1 [210 kB] 194s Get:107 http://ftpmaster.internal/ubuntu questing/main arm64 libpcre2-posix3 arm64 10.45-1 [7084 B] 194s Get:108 http://ftpmaster.internal/ubuntu questing/main arm64 libpcre2-dev arm64 10.45-1 [768 kB] 194s Get:109 http://ftpmaster.internal/ubuntu questing/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB] 194s Get:110 http://ftpmaster.internal/ubuntu questing/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB] 194s Get:111 http://ftpmaster.internal/ubuntu questing/main arm64 libpng-dev arm64 1.6.47-1.1 [269 kB] 194s Get:112 http://ftpmaster.internal/ubuntu questing/universe arm64 libpotrace0 arm64 1.16-2build1 [16.0 kB] 194s Get:113 http://ftpmaster.internal/ubuntu questing/universe arm64 libptexenc1 arm64 2024.20240313.70630+ds-6 [41.7 kB] 194s Get:114 http://ftpmaster.internal/ubuntu questing/main arm64 libreadline-dev arm64 8.2-6 [179 kB] 194s Get:115 http://ftpmaster.internal/ubuntu questing/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB] 194s Get:116 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libsm6 arm64 2:1.2.6-1 [16.6 kB] 194s Get:117 http://ftpmaster.internal/ubuntu questing/universe arm64 libsynctex2 arm64 2024.20240313.70630+ds-6 [60.4 kB] 194s Get:118 http://ftpmaster.internal/ubuntu questing/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB] 194s Get:119 http://ftpmaster.internal/ubuntu questing/universe arm64 libteckit0 arm64 2.5.12+ds1-1 [405 kB] 194s Get:120 http://ftpmaster.internal/ubuntu questing/universe arm64 libtexlua53-5 arm64 2024.20240313.70630+ds-6 [122 kB] 194s Get:121 http://ftpmaster.internal/ubuntu questing/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 194s Get:122 http://ftpmaster.internal/ubuntu questing/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB] 194s Get:123 http://ftpmaster.internal/ubuntu questing/main arm64 libtiff6 arm64 4.7.0-3ubuntu1 [197 kB] 194s Get:124 http://ftpmaster.internal/ubuntu questing/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 194s Get:125 http://ftpmaster.internal/ubuntu questing/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 194s Get:126 http://ftpmaster.internal/ubuntu questing/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB] 194s Get:127 http://ftpmaster.internal/ubuntu questing/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 194s Get:128 http://ftpmaster.internal/ubuntu questing/main arm64 libxmu6 arm64 2:1.1.3-3build2 [47.5 kB] 194s Get:129 http://ftpmaster.internal/ubuntu questing/main arm64 libxpm4 arm64 1:3.5.17-1build2 [35.1 kB] 194s Get:130 http://ftpmaster.internal/ubuntu questing/main arm64 libxaw7 arm64 2:1.0.16-1 [184 kB] 194s Get:131 http://ftpmaster.internal/ubuntu questing/main arm64 libxi6 arm64 2:1.8.2-1 [32.4 kB] 194s Get:132 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libzstd-dev arm64 1.5.7+dfsg-1 [358 kB] 194s Get:133 http://ftpmaster.internal/ubuntu questing/universe arm64 libzzip-0-13t64 arm64 0.13.78+dfsg.1-0.1 [30.8 kB] 194s Get:134 http://ftpmaster.internal/ubuntu questing/main arm64 zip arm64 3.0-14ubuntu2 [173 kB] 194s Get:135 http://ftpmaster.internal/ubuntu questing/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 194s Get:136 http://ftpmaster.internal/ubuntu questing/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 194s Get:137 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-base-core arm64 4.5.0-3 [28.7 MB] 196s Get:138 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-cran-littler arm64 0.3.21-1 [99.7 kB] 196s Get:139 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 littler all 0.3.21-1 [2584 B] 196s Get:140 http://ftpmaster.internal/ubuntu questing/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 196s Get:141 http://ftpmaster.internal/ubuntu questing/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 196s Get:142 http://ftpmaster.internal/ubuntu questing/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 196s Get:143 http://ftpmaster.internal/ubuntu questing/universe arm64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 196s Get:144 http://ftpmaster.internal/ubuntu questing/universe arm64 pandoc arm64 3.1.11.1+ds-2 [28.1 MB] 196s Get:145 http://ftpmaster.internal/ubuntu questing/main arm64 liblzma-dev arm64 5.6.4-1ubuntu1 [180 kB] 196s Get:146 http://ftpmaster.internal/ubuntu questing/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB] 196s Get:147 http://ftpmaster.internal/ubuntu questing/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB] 196s Get:148 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libtirpc-dev arm64 1.3.6+ds-1 [202 kB] 196s Get:149 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-base-dev all 4.5.0-3 [4188 B] 196s Get:150 http://ftpmaster.internal/ubuntu questing/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 196s Get:151 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 197s Get:152 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-bioc-affxparser arm64 1.78.0-3 [1005 kB] 197s Get:153 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 197s Get:154 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-affyio arm64 1.76.0-2 [89.1 kB] 197s Get:155 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-biobase arm64 2.66.0-2 [2331 kB] 197s Get:156 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-s4vectors arm64 0.44.0+dfsg-2 [2054 kB] 197s Get:157 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-bioc-iranges arm64 2.40.1-3 [2301 kB] 197s Get:158 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-dbi all 1.2.3-1 [853 kB] 197s Get:159 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-bit arm64 4.6.0+dfsg-1 [450 kB] 197s Get:160 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-bit64 arm64 4.6.0-1-1ubuntu2 [497 kB] 197s Get:161 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-cran-rlang arm64 1.1.5-3 [1706 kB] 197s Get:162 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB] 197s Get:163 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 197s Get:164 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 197s Get:165 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 197s Get:166 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-blob all 1.2.4-1 [49.8 kB] 197s Get:167 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB] 197s Get:168 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB] 197s Get:169 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 197s Get:170 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 197s Get:171 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-plogr all 0.2.0-3build1 [15.1 kB] 197s Get:172 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-cpp11 all 0.5.2-1 [233 kB] 197s Get:173 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-rsqlite arm64 2.3.9-1 [1247 kB] 197s Get:174 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-curl arm64 6.2.1+dfsg-1ubuntu1 [196 kB] 197s Get:175 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-jsonlite arm64 1.9.1+dfsg-1 [445 kB] 197s Get:176 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 197s Get:177 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-sys arm64 3.4.3-1 [45.2 kB] 197s Get:178 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-askpass arm64 1.2.1-1 [24.8 kB] 197s Get:179 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-openssl arm64 2.3.2+dfsg-1 [406 kB] 197s Get:180 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB] 197s Get:181 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 197s Get:182 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-png arm64 0.1-8-1build2 [40.1 kB] 197s Get:183 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-xvector arm64 0.46.0-2 [618 kB] 197s Get:184 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 197s Get:185 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 198s Get:186 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 198s Get:187 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB] 198s Get:188 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-biostrings arm64 2.74.1+dfsg-2 [13.3 MB] 199s Get:189 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-bioc-keggrest all 1.46.0+dfsg-3 [183 kB] 199s Get:190 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-annotationdbi all 1.68.0-2 [4857 kB] 199s Get:191 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-xml arm64 3.99-0.18-1 [1745 kB] 199s Get:192 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 199s Get:193 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-annotate all 1.84.0+dfsg-2 [1870 kB] 199s Get:194 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-generics all 0.1.3-1 [81.3 kB] 199s Get:195 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 199s Get:196 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-utf8 arm64 1.2.4-1 [140 kB] 199s Get:197 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 199s Get:198 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-fansi arm64 1.0.6-1ubuntu1 [628 kB] 199s Get:199 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-tibble arm64 3.2.1+dfsg-3 [420 kB] 199s Get:200 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 199s Get:201 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-tidyselect arm64 1.2.1+dfsg-1 [222 kB] 199s Get:202 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-dplyr arm64 1.1.4-4 [1534 kB] 199s Get:203 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-purrr arm64 1.0.4-1 [552 kB] 200s Get:204 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-stringi arm64 1.8.4-1build1 [902 kB] 200s Get:205 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-stringr all 1.5.1-1 [290 kB] 200s Get:206 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-tidyr arm64 1.3.1-1 [1154 kB] 200s Get:207 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-dbplyr all 2.5.0+dfsg-1 [1233 kB] 200s Get:208 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-filelock arm64 1.0.3-1 [29.7 kB] 200s Get:209 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-biocfilecache all 2.14.0+dfsg-2 [300 kB] 200s Get:210 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 200s Get:211 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB] 200s Get:212 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB] 200s Get:213 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-evaluate all 1.0.3-1 [114 kB] 200s Get:214 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-xfun arm64 0.51+dfsg-1 [573 kB] 200s Get:215 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 200s Get:216 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB] 200s Get:217 http://ftpmaster.internal/ubuntu questing/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 200s Get:218 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-knitr all 1.50+dfsg-1 [840 kB] 200s Get:219 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 200s Get:220 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB] 200s Get:221 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 200s Get:222 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB] 200s Get:223 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-cran-bslib all 0.9.0+dfsg-3 [4562 kB] 200s Get:224 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 201s Get:225 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-tinytex all 0.56-1 [148 kB] 201s Get:226 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-modernizr all 3.13.0-0.1 [101 kB] 201s Get:227 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 201s Get:228 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-rcpp arm64 1.0.14-1 [1978 kB] 201s Get:229 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-later arm64 1.4.1+dfsg-1 [141 kB] 201s Get:230 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-promises arm64 1.3.2+dfsg-1 [290 kB] 201s Get:231 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB] 201s Get:232 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 201s Get:233 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-commonmark arm64 1.9.5-1 [130 kB] 201s Get:234 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 201s Get:235 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 201s Get:236 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 201s Get:237 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-bookdown all 0.42+dfsg-1 [1409 kB] 201s Get:238 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 201s Get:239 http://ftpmaster.internal/ubuntu questing/universe arm64 tex-common all 6.19 [29.8 kB] 201s Get:240 http://ftpmaster.internal/ubuntu questing/main arm64 t1utils arm64 1.41-4build3 [61.0 kB] 201s Get:241 http://ftpmaster.internal/ubuntu questing/universe arm64 texlive-binaries arm64 2024.20240313.70630+ds-6 [8349 kB] 201s Get:242 http://ftpmaster.internal/ubuntu questing/universe arm64 texlive-base all 2024.20250309-1 [22.7 MB] 202s Get:243 http://ftpmaster.internal/ubuntu questing/universe arm64 texlive-latex-base all 2024.20250309-1 [1276 kB] 202s Get:244 http://ftpmaster.internal/ubuntu questing/universe arm64 texlive-bibtex-extra all 2024.20250309-2 [79.3 MB] 206s Get:245 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-biocversion all 3.20.0-2 [11.1 kB] 206s Get:246 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-biocstyle all 2.34.0+dfsg-1 [451 kB] 206s Get:247 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-hms all 1.1.3-1 [96.5 kB] 206s Get:248 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-prettyunits all 1.2.0-1 [162 kB] 206s Get:249 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-progress all 1.2.3-1 [91.9 kB] 206s Get:250 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-httr2 all 1.1.1-1 [752 kB] 206s Get:251 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-xml2 arm64 1.3.8-1 [326 kB] 206s Get:252 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-biomart all 2.62.1+dfsg-1 [444 kB] 206s Get:253 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-cran-lattice arm64 0.22-7-1 [1365 kB] 206s Get:254 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-matrix arm64 1.7-3-1 [4045 kB] 206s Get:255 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-matrixstats arm64 1.5.0-1 [496 kB] 206s Get:256 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 206s Get:257 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-abind all 1.4-8-1 [66.9 kB] 206s Get:258 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-s4arrays arm64 1.6.0+dfsg-2 [698 kB] 206s Get:259 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-bioc-sparsearray arm64 1.6.2+dfsg-2 [1369 kB] 206s Get:260 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-delayedarray arm64 0.32.0+dfsg-2 [2064 kB] 206s Get:261 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-survival arm64 3.8-3-1 [8213 kB] 206s Get:262 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-genefilter arm64 1.88.0-2 [1241 kB] 206s Get:263 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-genomicranges arm64 1.58.0+dfsg-2 [2083 kB] 206s Get:264 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-statmod arm64 1.5.0-1 [294 kB] 206s Get:265 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-limma arm64 3.62.2+dfsg-1 [1968 kB] 206s Get:266 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 206s Get:267 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-codetools all 0.2-20-1 [90.5 kB] 206s Get:268 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-iterators all 1.0.14-1 [336 kB] 206s Get:269 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-foreach all 1.5.2-1 [124 kB] 206s Get:270 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-ff arm64 4.5.2+ds-1 [1000 kB] 207s Get:271 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-oligoclasses all 1.68.0-2 [1259 kB] 207s Get:272 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-preprocesscore arm64 1.68.0+ds-2 [152 kB] 207s Get:273 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-bioc-oligo arm64 1.70.0+ds-3 [913 kB] 207s Get:274 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-bitops arm64 1.0-9-1 [30.2 kB] 207s Get:275 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 207s Get:276 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-rcurl arm64 1.98-1.16+dfsg-1 [806 kB] 207s Get:277 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-runit all 0.4.33-1 [377 kB] 207s Get:278 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 zstd arm64 1.5.7+dfsg-1 [607 kB] 207s Preconfiguring packages ... 208s Fetched 410 MB in 21s (19.7 MB/s) 208s (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117821 files and directories currently installed.) 208s Preparing to unpack .../libgcc-s1_15.1.0-1ubuntu1_arm64.deb ... 208s Unpacking libgcc-s1:arm64 (15.1.0-1ubuntu1) over (15-20250404-0ubuntu1) ... 208s Setting up libgcc-s1:arm64 (15.1.0-1ubuntu1) ... 208s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117821 files and directories currently installed.) 208s Preparing to unpack .../libatomic1_15.1.0-1ubuntu1_arm64.deb ... 208s Unpacking libatomic1:arm64 (15.1.0-1ubuntu1) over (15-20250404-0ubuntu1) ... 208s Preparing to unpack .../libstdc++6_15.1.0-1ubuntu1_arm64.deb ... 208s Unpacking libstdc++6:arm64 (15.1.0-1ubuntu1) over (15-20250404-0ubuntu1) ... 208s Setting up libstdc++6:arm64 (15.1.0-1ubuntu1) ... 208s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117821 files and directories currently installed.) 208s Preparing to unpack .../libzstd1_1.5.7+dfsg-1_arm64.deb ... 208s Unpacking libzstd1:arm64 (1.5.7+dfsg-1) over (1.5.6+dfsg-2) ... 209s Setting up libzstd1:arm64 (1.5.7+dfsg-1) ... 209s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117821 files and directories currently installed.) 209s Preparing to unpack .../000-gcc-14-base_14.2.0-22ubuntu1_arm64.deb ... 209s Unpacking gcc-14-base:arm64 (14.2.0-22ubuntu1) over (14.2.0-19ubuntu2) ... 209s Preparing to unpack .../001-libtirpc-common_1.3.6+ds-1_all.deb ... 209s Unpacking libtirpc-common (1.3.6+ds-1) over (1.3.4+ds-1.3) ... 209s Preparing to unpack .../002-libtirpc3t64_1.3.6+ds-1_arm64.deb ... 209s Unpacking libtirpc3t64:arm64 (1.3.6+ds-1) over (1.3.4+ds-1.3) ... 209s Selecting previously unselected package libisl23:arm64. 209s Preparing to unpack .../003-libisl23_0.27-1_arm64.deb ... 209s Unpacking libisl23:arm64 (0.27-1) ... 209s Selecting previously unselected package libmpc3:arm64. 209s Preparing to unpack .../004-libmpc3_1.3.1-1build2_arm64.deb ... 209s Unpacking libmpc3:arm64 (1.3.1-1build2) ... 209s Selecting previously unselected package cpp-14-aarch64-linux-gnu. 209s Preparing to unpack .../005-cpp-14-aarch64-linux-gnu_14.2.0-22ubuntu1_arm64.deb ... 209s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-22ubuntu1) ... 209s Selecting previously unselected package cpp-14. 209s Preparing to unpack .../006-cpp-14_14.2.0-22ubuntu1_arm64.deb ... 209s Unpacking cpp-14 (14.2.0-22ubuntu1) ... 209s Selecting previously unselected package cpp-aarch64-linux-gnu. 209s Preparing to unpack .../007-cpp-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 209s Unpacking cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 209s Selecting previously unselected package cpp. 209s Preparing to unpack .../008-cpp_4%3a14.2.0-1ubuntu1_arm64.deb ... 209s Unpacking cpp (4:14.2.0-1ubuntu1) ... 209s Selecting previously unselected package libcc1-0:arm64. 209s Preparing to unpack .../009-libcc1-0_15.1.0-1ubuntu1_arm64.deb ... 209s Unpacking libcc1-0:arm64 (15.1.0-1ubuntu1) ... 209s Selecting previously unselected package libgomp1:arm64. 209s Preparing to unpack .../010-libgomp1_15.1.0-1ubuntu1_arm64.deb ... 209s Unpacking libgomp1:arm64 (15.1.0-1ubuntu1) ... 209s Selecting previously unselected package libitm1:arm64. 209s Preparing to unpack .../011-libitm1_15.1.0-1ubuntu1_arm64.deb ... 209s Unpacking libitm1:arm64 (15.1.0-1ubuntu1) ... 209s Selecting previously unselected package libasan8:arm64. 209s Preparing to unpack .../012-libasan8_15.1.0-1ubuntu1_arm64.deb ... 209s Unpacking libasan8:arm64 (15.1.0-1ubuntu1) ... 210s Selecting previously unselected package liblsan0:arm64. 210s Preparing to unpack .../013-liblsan0_15.1.0-1ubuntu1_arm64.deb ... 210s Unpacking liblsan0:arm64 (15.1.0-1ubuntu1) ... 210s Selecting previously unselected package libtsan2:arm64. 210s Preparing to unpack .../014-libtsan2_15.1.0-1ubuntu1_arm64.deb ... 210s Unpacking libtsan2:arm64 (15.1.0-1ubuntu1) ... 210s Selecting previously unselected package libubsan1:arm64. 210s Preparing to unpack .../015-libubsan1_15.1.0-1ubuntu1_arm64.deb ... 210s Unpacking libubsan1:arm64 (15.1.0-1ubuntu1) ... 210s Selecting previously unselected package libhwasan0:arm64. 210s Preparing to unpack .../016-libhwasan0_15.1.0-1ubuntu1_arm64.deb ... 210s Unpacking libhwasan0:arm64 (15.1.0-1ubuntu1) ... 210s Selecting previously unselected package libgcc-14-dev:arm64. 210s Preparing to unpack .../017-libgcc-14-dev_14.2.0-22ubuntu1_arm64.deb ... 210s Unpacking libgcc-14-dev:arm64 (14.2.0-22ubuntu1) ... 210s Selecting previously unselected package gcc-14-aarch64-linux-gnu. 210s Preparing to unpack .../018-gcc-14-aarch64-linux-gnu_14.2.0-22ubuntu1_arm64.deb ... 210s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-22ubuntu1) ... 210s Selecting previously unselected package gcc-14. 210s Preparing to unpack .../019-gcc-14_14.2.0-22ubuntu1_arm64.deb ... 210s Unpacking gcc-14 (14.2.0-22ubuntu1) ... 210s Selecting previously unselected package gcc-aarch64-linux-gnu. 210s Preparing to unpack .../020-gcc-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 210s Unpacking gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 210s Selecting previously unselected package gcc. 211s Preparing to unpack .../021-gcc_4%3a14.2.0-1ubuntu1_arm64.deb ... 211s Unpacking gcc (4:14.2.0-1ubuntu1) ... 211s Selecting previously unselected package libstdc++-14-dev:arm64. 211s Preparing to unpack .../022-libstdc++-14-dev_14.2.0-22ubuntu1_arm64.deb ... 211s Unpacking libstdc++-14-dev:arm64 (14.2.0-22ubuntu1) ... 211s Selecting previously unselected package g++-14-aarch64-linux-gnu. 211s Preparing to unpack .../023-g++-14-aarch64-linux-gnu_14.2.0-22ubuntu1_arm64.deb ... 211s Unpacking g++-14-aarch64-linux-gnu (14.2.0-22ubuntu1) ... 211s Selecting previously unselected package g++-14. 211s Preparing to unpack .../024-g++-14_14.2.0-22ubuntu1_arm64.deb ... 211s Unpacking g++-14 (14.2.0-22ubuntu1) ... 211s Selecting previously unselected package g++-aarch64-linux-gnu. 211s Preparing to unpack .../025-g++-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 211s Unpacking g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 211s Selecting previously unselected package g++. 211s Preparing to unpack .../026-g++_4%3a14.2.0-1ubuntu1_arm64.deb ... 211s Unpacking g++ (4:14.2.0-1ubuntu1) ... 211s Selecting previously unselected package build-essential. 211s Preparing to unpack .../027-build-essential_12.12ubuntu1_arm64.deb ... 211s Unpacking build-essential (12.12ubuntu1) ... 211s Selecting previously unselected package dctrl-tools. 211s Preparing to unpack .../028-dctrl-tools_2.24-3build3_arm64.deb ... 211s Unpacking dctrl-tools (2.24-3build3) ... 211s Selecting previously unselected package fonts-dejavu-mono. 211s Preparing to unpack .../029-fonts-dejavu-mono_2.37-8_all.deb ... 211s Unpacking fonts-dejavu-mono (2.37-8) ... 211s Selecting previously unselected package fonts-dejavu-core. 211s Preparing to unpack .../030-fonts-dejavu-core_2.37-8_all.deb ... 211s Unpacking fonts-dejavu-core (2.37-8) ... 211s Selecting previously unselected package fontconfig-config. 211s Preparing to unpack .../031-fontconfig-config_2.15.0-2.2ubuntu1_arm64.deb ... 212s Unpacking fontconfig-config (2.15.0-2.2ubuntu1) ... 212s Selecting previously unselected package libfontconfig1:arm64. 212s Preparing to unpack .../032-libfontconfig1_2.15.0-2.2ubuntu1_arm64.deb ... 212s Unpacking libfontconfig1:arm64 (2.15.0-2.2ubuntu1) ... 212s Selecting previously unselected package fontconfig. 212s Preparing to unpack .../033-fontconfig_2.15.0-2.2ubuntu1_arm64.deb ... 212s Unpacking fontconfig (2.15.0-2.2ubuntu1) ... 212s Selecting previously unselected package fonts-font-awesome. 212s Preparing to unpack .../034-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 212s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 212s Selecting previously unselected package fonts-glyphicons-halflings. 212s Preparing to unpack .../035-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-4_all.deb ... 212s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-4) ... 212s Selecting previously unselected package fonts-lmodern. 212s Preparing to unpack .../036-fonts-lmodern_2.005-1_all.deb ... 212s Unpacking fonts-lmodern (2.005-1) ... 212s Selecting previously unselected package fonts-mathjax. 212s Preparing to unpack .../037-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 212s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 212s Selecting previously unselected package libgfortran5:arm64. 212s Preparing to unpack .../038-libgfortran5_15.1.0-1ubuntu1_arm64.deb ... 212s Unpacking libgfortran5:arm64 (15.1.0-1ubuntu1) ... 212s Selecting previously unselected package libgfortran-14-dev:arm64. 212s Preparing to unpack .../039-libgfortran-14-dev_14.2.0-22ubuntu1_arm64.deb ... 212s Unpacking libgfortran-14-dev:arm64 (14.2.0-22ubuntu1) ... 212s Selecting previously unselected package gfortran-14-aarch64-linux-gnu. 212s Preparing to unpack .../040-gfortran-14-aarch64-linux-gnu_14.2.0-22ubuntu1_arm64.deb ... 212s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-22ubuntu1) ... 213s Selecting previously unselected package gfortran-14. 213s Preparing to unpack .../041-gfortran-14_14.2.0-22ubuntu1_arm64.deb ... 213s Unpacking gfortran-14 (14.2.0-22ubuntu1) ... 213s Selecting previously unselected package gfortran-aarch64-linux-gnu. 213s Preparing to unpack .../042-gfortran-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 213s Unpacking gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 213s Selecting previously unselected package gfortran. 213s Preparing to unpack .../043-gfortran_4%3a14.2.0-1ubuntu1_arm64.deb ... 213s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 213s Selecting previously unselected package icu-devtools. 213s Preparing to unpack .../044-icu-devtools_76.1-1ubuntu2_arm64.deb ... 213s Unpacking icu-devtools (76.1-1ubuntu2) ... 213s Selecting previously unselected package javascript-common. 213s Preparing to unpack .../045-javascript-common_12_all.deb ... 213s Unpacking javascript-common (12) ... 213s Selecting previously unselected package libio-string-perl. 213s Preparing to unpack .../046-libio-string-perl_1.08-4_all.deb ... 213s Unpacking libio-string-perl (1.08-4) ... 213s Selecting previously unselected package liblatex-tounicode-perl. 213s Preparing to unpack .../047-liblatex-tounicode-perl_0.55-1_all.deb ... 213s Unpacking liblatex-tounicode-perl (0.55-1) ... 213s Selecting previously unselected package libbibtex-parser-perl. 213s Preparing to unpack .../048-libbibtex-parser-perl_1.05+dfsg-1_all.deb ... 213s Unpacking libbibtex-parser-perl (1.05+dfsg-1) ... 213s Selecting previously unselected package libblas3:arm64. 213s Preparing to unpack .../049-libblas3_3.12.1-2_arm64.deb ... 213s Unpacking libblas3:arm64 (3.12.1-2) ... 213s Selecting previously unselected package libblas-dev:arm64. 213s Preparing to unpack .../050-libblas-dev_3.12.1-2_arm64.deb ... 213s Unpacking libblas-dev:arm64 (3.12.1-2) ... 213s Selecting previously unselected package libbz2-dev:arm64. 213s Preparing to unpack .../051-libbz2-dev_1.0.8-6_arm64.deb ... 213s Unpacking libbz2-dev:arm64 (1.0.8-6) ... 213s Selecting previously unselected package libpixman-1-0:arm64. 213s Preparing to unpack .../052-libpixman-1-0_0.44.0-3_arm64.deb ... 213s Unpacking libpixman-1-0:arm64 (0.44.0-3) ... 213s Selecting previously unselected package libxcb-render0:arm64. 213s Preparing to unpack .../053-libxcb-render0_1.17.0-2_arm64.deb ... 213s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 213s Selecting previously unselected package libxcb-shm0:arm64. 213s Preparing to unpack .../054-libxcb-shm0_1.17.0-2_arm64.deb ... 213s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 213s Selecting previously unselected package libxrender1:arm64. 213s Preparing to unpack .../055-libxrender1_1%3a0.9.12-1_arm64.deb ... 213s Unpacking libxrender1:arm64 (1:0.9.12-1) ... 213s Selecting previously unselected package libcairo2:arm64. 213s Preparing to unpack .../056-libcairo2_1.18.4-1_arm64.deb ... 213s Unpacking libcairo2:arm64 (1.18.4-1) ... 213s Selecting previously unselected package libdatrie1:arm64. 213s Preparing to unpack .../057-libdatrie1_0.2.13-3build1_arm64.deb ... 213s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 213s Selecting previously unselected package libdeflate0:arm64. 214s Preparing to unpack .../058-libdeflate0_1.23-2_arm64.deb ... 214s Unpacking libdeflate0:arm64 (1.23-2) ... 214s Selecting previously unselected package libdeflate-dev:arm64. 214s Preparing to unpack .../059-libdeflate-dev_1.23-2_arm64.deb ... 214s Unpacking libdeflate-dev:arm64 (1.23-2) ... 214s Selecting previously unselected package libgraphite2-3:arm64. 214s Preparing to unpack .../060-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 214s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 214s Selecting previously unselected package libharfbuzz0b:arm64. 214s Preparing to unpack .../061-libharfbuzz0b_10.2.0-1_arm64.deb ... 214s Unpacking libharfbuzz0b:arm64 (10.2.0-1) ... 214s Selecting previously unselected package x11-common. 214s Preparing to unpack .../062-x11-common_1%3a7.7+23ubuntu4_all.deb ... 214s Unpacking x11-common (1:7.7+23ubuntu4) ... 214s Selecting previously unselected package libice6:arm64. 214s Preparing to unpack .../063-libice6_2%3a1.1.1-1_arm64.deb ... 214s Unpacking libice6:arm64 (2:1.1.1-1) ... 214s Selecting previously unselected package libicu-dev:arm64. 214s Preparing to unpack .../064-libicu-dev_76.1-1ubuntu2_arm64.deb ... 214s Unpacking libicu-dev:arm64 (76.1-1ubuntu2) ... 214s Selecting previously unselected package libjpeg-turbo8:arm64. 214s Preparing to unpack .../065-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ... 214s Unpacking libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 214s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 214s Preparing to unpack .../066-libjpeg-turbo8-dev_2.1.5-3ubuntu2_arm64.deb ... 214s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ... 214s Selecting previously unselected package libjpeg8:arm64. 214s Preparing to unpack .../067-libjpeg8_8c-2ubuntu11_arm64.deb ... 214s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 214s Selecting previously unselected package libjpeg8-dev:arm64. 214s Preparing to unpack .../068-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 214s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 214s Selecting previously unselected package libjpeg-dev:arm64. 214s Preparing to unpack .../069-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 214s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 214s Selecting previously unselected package libjs-bootstrap. 214s Preparing to unpack .../070-libjs-bootstrap_3.4.1+dfsg-4_all.deb ... 214s Unpacking libjs-bootstrap (3.4.1+dfsg-4) ... 214s Selecting previously unselected package libjs-popper.js. 215s Preparing to unpack .../071-libjs-popper.js_1.16.1+ds-6_all.deb ... 215s Unpacking libjs-popper.js (1.16.1+ds-6) ... 215s Selecting previously unselected package libjs-bootstrap4. 215s Preparing to unpack .../072-libjs-bootstrap4_4.6.2+dfsg-1_all.deb ... 215s Unpacking libjs-bootstrap4 (4.6.2+dfsg-1) ... 215s Selecting previously unselected package libjs-d3. 215s Preparing to unpack .../073-libjs-d3_3.5.17-4_all.deb ... 215s Unpacking libjs-d3 (3.5.17-4) ... 215s Selecting previously unselected package libjs-es5-shim. 215s Preparing to unpack .../074-libjs-es5-shim_4.6.7-2_all.deb ... 215s Unpacking libjs-es5-shim (4.6.7-2) ... 215s Selecting previously unselected package libjs-highlight.js. 215s Preparing to unpack .../075-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 215s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 215s Selecting previously unselected package libjs-jquery. 215s Preparing to unpack .../076-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 215s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 215s Selecting previously unselected package libjs-jquery-datatables. 215s Preparing to unpack .../077-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 215s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 215s Selecting previously unselected package libjs-sifter.js. 215s Preparing to unpack .../078-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 215s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 215s Selecting previously unselected package libjs-microplugin.js. 215s Preparing to unpack .../079-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 215s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 215s Selecting previously unselected package libjs-jquery-selectize.js. 215s Preparing to unpack .../080-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 215s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 215s Selecting previously unselected package libjs-jquery-ui. 215s Preparing to unpack .../081-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 215s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 215s Selecting previously unselected package libjs-json. 215s Preparing to unpack .../082-libjs-json_0~20221030+~1.0.8-1_all.deb ... 215s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 215s Selecting previously unselected package libjs-lunr. 215s Preparing to unpack .../083-libjs-lunr_2.3.9~dfsg-2_all.deb ... 215s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 215s Selecting previously unselected package libjs-prettify. 215s Preparing to unpack .../084-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 215s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 215s Selecting previously unselected package libkpathsea6:arm64. 215s Preparing to unpack .../085-libkpathsea6_2024.20240313.70630+ds-6_arm64.deb ... 215s Unpacking libkpathsea6:arm64 (2024.20240313.70630+ds-6) ... 215s Selecting previously unselected package liblapack3:arm64. 215s Preparing to unpack .../086-liblapack3_3.12.1-2_arm64.deb ... 215s Unpacking liblapack3:arm64 (3.12.1-2) ... 215s Selecting previously unselected package liblapack-dev:arm64. 216s Preparing to unpack .../087-liblapack-dev_3.12.1-2_arm64.deb ... 216s Unpacking liblapack-dev:arm64 (3.12.1-2) ... 216s Selecting previously unselected package liblerc4:arm64. 216s Preparing to unpack .../088-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ... 216s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 216s Selecting previously unselected package liblua5.4-0:arm64. 216s Preparing to unpack .../089-liblua5.4-0_5.4.7-1_arm64.deb ... 216s Unpacking liblua5.4-0:arm64 (5.4.7-1) ... 216s Selecting previously unselected package libmpfi0:arm64. 216s Preparing to unpack .../090-libmpfi0_1.5.4+ds-4_arm64.deb ... 216s Unpacking libmpfi0:arm64 (1.5.4+ds-4) ... 216s Selecting previously unselected package libncurses-dev:arm64. 216s Preparing to unpack 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libpcre2-posix3:arm64 (10.45-1) ... 216s Selecting previously unselected package libpcre2-dev:arm64. 216s Preparing to unpack .../102-libpcre2-dev_10.45-1_arm64.deb ... 216s Unpacking libpcre2-dev:arm64 (10.45-1) ... 217s Selecting previously unselected package libpkgconf3:arm64. 217s Preparing to unpack .../103-libpkgconf3_1.8.1-4_arm64.deb ... 217s Unpacking libpkgconf3:arm64 (1.8.1-4) ... 217s Selecting previously unselected package zlib1g-dev:arm64. 217s Preparing to unpack .../104-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ... 217s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 217s Selecting previously unselected package libpng-dev:arm64. 217s Preparing to unpack .../105-libpng-dev_1.6.47-1.1_arm64.deb ... 217s Unpacking libpng-dev:arm64 (1.6.47-1.1) ... 217s Selecting previously unselected package libpotrace0:arm64. 217s Preparing to unpack .../106-libpotrace0_1.16-2build1_arm64.deb ... 217s Unpacking libpotrace0:arm64 (1.16-2build1) ... 217s Selecting previously unselected package libptexenc1:arm64. 217s Preparing to unpack .../107-libptexenc1_2024.20240313.70630+ds-6_arm64.deb ... 217s Unpacking libptexenc1:arm64 (2024.20240313.70630+ds-6) ... 217s Selecting previously unselected package libreadline-dev:arm64. 217s Preparing to unpack .../108-libreadline-dev_8.2-6_arm64.deb ... 217s Unpacking libreadline-dev:arm64 (8.2-6) ... 217s Selecting previously unselected package libsharpyuv0:arm64. 217s Preparing to unpack .../109-libsharpyuv0_1.5.0-0.1_arm64.deb ... 217s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ... 217s Selecting previously unselected package libsm6:arm64. 217s Preparing to unpack .../110-libsm6_2%3a1.2.6-1_arm64.deb ... 217s Unpacking libsm6:arm64 (2:1.2.6-1) ... 217s Selecting previously unselected package libsynctex2:arm64. 217s Preparing to unpack .../111-libsynctex2_2024.20240313.70630+ds-6_arm64.deb ... 217s Unpacking libsynctex2:arm64 (2024.20240313.70630+ds-6) ... 217s Selecting previously unselected package libtcl8.6:arm64. 217s Preparing to unpack .../112-libtcl8.6_8.6.16+dfsg-1_arm64.deb ... 217s Unpacking libtcl8.6:arm64 (8.6.16+dfsg-1) ... 217s Selecting previously unselected package libteckit0:arm64. 217s Preparing to unpack .../113-libteckit0_2.5.12+ds1-1_arm64.deb ... 217s Unpacking libteckit0:arm64 (2.5.12+ds1-1) ... 217s Selecting previously unselected package libtexlua53-5:arm64. 217s Preparing to unpack .../114-libtexlua53-5_2024.20240313.70630+ds-6_arm64.deb ... 217s Unpacking libtexlua53-5:arm64 (2024.20240313.70630+ds-6) ... 217s Selecting previously unselected package libjbig0:arm64. 217s Preparing to unpack .../115-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 217s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 217s Selecting previously unselected package libwebp7:arm64. 217s Preparing to unpack .../116-libwebp7_1.5.0-0.1_arm64.deb ... 217s Unpacking libwebp7:arm64 (1.5.0-0.1) ... 217s Selecting previously unselected package libtiff6:arm64. 217s Preparing to unpack .../117-libtiff6_4.7.0-3ubuntu1_arm64.deb ... 217s Unpacking libtiff6:arm64 (4.7.0-3ubuntu1) ... 217s Selecting previously unselected package libxft2:arm64. 217s Preparing to unpack .../118-libxft2_2.3.6-1build1_arm64.deb ... 217s Unpacking libxft2:arm64 (2.3.6-1build1) ... 217s Selecting previously unselected package libxss1:arm64. 217s Preparing to unpack .../119-libxss1_1%3a1.2.3-1build3_arm64.deb ... 217s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 217s Selecting previously unselected package libtk8.6:arm64. 217s Preparing to unpack .../120-libtk8.6_8.6.16-1_arm64.deb ... 217s Unpacking libtk8.6:arm64 (8.6.16-1) ... 218s Selecting previously unselected package libxt6t64:arm64. 218s Preparing to unpack .../121-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ... 218s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ... 218s Selecting previously unselected package libxmu6:arm64. 218s Preparing to unpack .../122-libxmu6_2%3a1.1.3-3build2_arm64.deb ... 218s Unpacking libxmu6:arm64 (2:1.1.3-3build2) ... 218s Selecting previously unselected package libxpm4:arm64. 218s Preparing to unpack .../123-libxpm4_1%3a3.5.17-1build2_arm64.deb ... 218s Unpacking libxpm4:arm64 (1:3.5.17-1build2) ... 218s Selecting previously unselected package libxaw7:arm64. 218s Preparing to unpack .../124-libxaw7_2%3a1.0.16-1_arm64.deb ... 218s Unpacking libxaw7:arm64 (2:1.0.16-1) ... 218s Selecting previously unselected package libxi6:arm64. 218s Preparing to unpack .../125-libxi6_2%3a1.8.2-1_arm64.deb ... 218s Unpacking libxi6:arm64 (2:1.8.2-1) ... 218s Selecting previously unselected package libzstd-dev:arm64. 218s Preparing to unpack .../126-libzstd-dev_1.5.7+dfsg-1_arm64.deb ... 218s Unpacking libzstd-dev:arm64 (1.5.7+dfsg-1) ... 218s Selecting previously unselected package libzzip-0-13t64:arm64. 218s Preparing to unpack .../127-libzzip-0-13t64_0.13.78+dfsg.1-0.1_arm64.deb ... 218s Unpacking libzzip-0-13t64:arm64 (0.13.78+dfsg.1-0.1) ... 218s Selecting previously unselected package zip. 218s Preparing to unpack .../128-zip_3.0-14ubuntu2_arm64.deb ... 218s Unpacking zip (3.0-14ubuntu2) ... 218s Selecting previously unselected package unzip. 218s Preparing to unpack .../129-unzip_6.0-28ubuntu6_arm64.deb ... 218s Unpacking unzip (6.0-28ubuntu6) ... 218s Selecting previously unselected package xdg-utils. 218s Preparing to unpack .../130-xdg-utils_1.2.1-2ubuntu1_all.deb ... 218s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 218s Selecting previously unselected package r-base-core. 218s Preparing to unpack .../131-r-base-core_4.5.0-3_arm64.deb ... 218s Unpacking r-base-core (4.5.0-3) ... 218s Selecting previously unselected package r-cran-littler. 218s Preparing to unpack .../132-r-cran-littler_0.3.21-1_arm64.deb ... 218s Unpacking r-cran-littler (0.3.21-1) ... 218s Selecting previously unselected package littler. 218s Preparing to unpack .../133-littler_0.3.21-1_all.deb ... 218s Unpacking littler (0.3.21-1) ... 219s Selecting previously unselected package node-bootstrap-sass. 219s Preparing to unpack .../134-node-bootstrap-sass_3.4.3-2_all.deb ... 219s Unpacking node-bootstrap-sass (3.4.3-2) ... 219s Selecting previously unselected package node-html5shiv. 219s Preparing to unpack .../135-node-html5shiv_3.7.3+dfsg-5_all.deb ... 219s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 219s Selecting previously unselected package node-normalize.css. 219s Preparing to unpack .../136-node-normalize.css_8.0.1-5_all.deb ... 219s Unpacking node-normalize.css (8.0.1-5) ... 219s Selecting previously unselected package pandoc-data. 219s Preparing to unpack .../137-pandoc-data_3.1.11.1-3build1_all.deb ... 219s Unpacking pandoc-data (3.1.11.1-3build1) ... 219s Selecting previously unselected package pandoc. 219s Preparing to unpack .../138-pandoc_3.1.11.1+ds-2_arm64.deb ... 219s Unpacking pandoc (3.1.11.1+ds-2) ... 220s Selecting previously unselected package liblzma-dev:arm64. 220s Preparing to unpack .../139-liblzma-dev_5.6.4-1ubuntu1_arm64.deb ... 220s Unpacking liblzma-dev:arm64 (5.6.4-1ubuntu1) ... 220s Selecting previously unselected package pkgconf-bin. 220s Preparing to unpack .../140-pkgconf-bin_1.8.1-4_arm64.deb ... 220s Unpacking pkgconf-bin (1.8.1-4) ... 220s Selecting previously unselected package pkgconf:arm64. 220s Preparing to unpack .../141-pkgconf_1.8.1-4_arm64.deb ... 220s Unpacking pkgconf:arm64 (1.8.1-4) ... 220s Selecting previously unselected package libtirpc-dev:arm64. 220s Preparing to unpack .../142-libtirpc-dev_1.3.6+ds-1_arm64.deb ... 220s Unpacking libtirpc-dev:arm64 (1.3.6+ds-1) ... 220s Selecting previously unselected package r-base-dev. 220s Preparing to unpack .../143-r-base-dev_4.5.0-3_all.deb ... 220s Unpacking r-base-dev (4.5.0-3) ... 220s Selecting previously unselected package pkg-r-autopkgtest. 220s Preparing to unpack .../144-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 220s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 220s Selecting previously unselected package r-bioc-biocgenerics. 220s Preparing to unpack .../145-r-bioc-biocgenerics_0.52.0-2_all.deb ... 220s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 220s Selecting previously unselected package r-bioc-affxparser. 220s Preparing to unpack .../146-r-bioc-affxparser_1.78.0-3_arm64.deb ... 220s Unpacking r-bioc-affxparser (1.78.0-3) ... 220s Selecting previously unselected package r-bioc-zlibbioc. 220s Preparing to unpack .../147-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 220s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 220s Selecting previously unselected package r-bioc-affyio. 220s Preparing to unpack .../148-r-bioc-affyio_1.76.0-2_arm64.deb ... 220s Unpacking r-bioc-affyio (1.76.0-2) ... 220s Selecting previously unselected package r-bioc-biobase. 220s Preparing to unpack .../149-r-bioc-biobase_2.66.0-2_arm64.deb ... 220s Unpacking r-bioc-biobase (2.66.0-2) ... 220s Selecting previously unselected package r-bioc-s4vectors. 220s Preparing to unpack .../150-r-bioc-s4vectors_0.44.0+dfsg-2_arm64.deb ... 220s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 220s Selecting previously unselected package r-bioc-iranges. 220s Preparing to unpack .../151-r-bioc-iranges_2.40.1-3_arm64.deb ... 220s Unpacking r-bioc-iranges (2.40.1-3) ... 220s Selecting previously unselected package r-cran-dbi. 221s Preparing to unpack .../152-r-cran-dbi_1.2.3-1_all.deb ... 221s Unpacking r-cran-dbi (1.2.3-1) ... 221s Selecting previously unselected package r-cran-bit. 221s Preparing to unpack .../153-r-cran-bit_4.6.0+dfsg-1_arm64.deb ... 221s Unpacking r-cran-bit (4.6.0+dfsg-1) ... 221s Selecting previously unselected package r-cran-bit64. 221s Preparing to unpack .../154-r-cran-bit64_4.6.0-1-1ubuntu2_arm64.deb ... 221s Unpacking r-cran-bit64 (4.6.0-1-1ubuntu2) ... 221s Selecting previously unselected package r-cran-rlang. 221s Preparing to unpack .../155-r-cran-rlang_1.1.5-3_arm64.deb ... 221s Unpacking r-cran-rlang (1.1.5-3) ... 221s Selecting previously unselected package r-cran-cli. 221s Preparing to unpack .../156-r-cran-cli_3.6.4-1_arm64.deb ... 221s Unpacking r-cran-cli (3.6.4-1) ... 221s Selecting previously unselected package r-cran-glue. 221s Preparing to unpack .../157-r-cran-glue_1.8.0-1_arm64.deb ... 221s Unpacking r-cran-glue (1.8.0-1) ... 221s Selecting previously unselected package r-cran-lifecycle. 221s Preparing to unpack .../158-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 221s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 221s Selecting previously unselected package r-cran-vctrs. 221s Preparing to unpack .../159-r-cran-vctrs_0.6.5-1_arm64.deb ... 221s Unpacking r-cran-vctrs (0.6.5-1) ... 221s Selecting previously unselected package r-cran-blob. 221s Preparing to unpack .../160-r-cran-blob_1.2.4-1_all.deb ... 221s Unpacking r-cran-blob (1.2.4-1) ... 221s Selecting previously unselected package r-cran-fastmap. 221s Preparing to unpack .../161-r-cran-fastmap_1.2.0-1_arm64.deb ... 221s Unpacking r-cran-fastmap (1.2.0-1) ... 221s Selecting previously unselected package r-cran-cachem. 221s Preparing to unpack .../162-r-cran-cachem_1.1.0-1_arm64.deb ... 221s Unpacking r-cran-cachem (1.1.0-1) ... 221s Selecting previously unselected package r-cran-memoise. 221s Preparing to unpack .../163-r-cran-memoise_2.0.1-1_all.deb ... 221s Unpacking r-cran-memoise (2.0.1-1) ... 221s Selecting previously unselected package r-cran-pkgconfig. 221s Preparing to unpack .../164-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 221s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 221s Selecting previously unselected package r-cran-plogr. 221s Preparing to unpack .../165-r-cran-plogr_0.2.0-3build1_all.deb ... 221s Unpacking r-cran-plogr (0.2.0-3build1) ... 221s Selecting previously unselected package r-cran-cpp11. 221s Preparing to unpack .../166-r-cran-cpp11_0.5.2-1_all.deb ... 221s Unpacking r-cran-cpp11 (0.5.2-1) ... 221s Selecting previously unselected package r-cran-rsqlite. 221s Preparing to unpack .../167-r-cran-rsqlite_2.3.9-1_arm64.deb ... 221s Unpacking r-cran-rsqlite (2.3.9-1) ... 221s Selecting previously unselected package r-cran-curl. 221s Preparing to unpack .../168-r-cran-curl_6.2.1+dfsg-1ubuntu1_arm64.deb ... 221s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 222s Selecting previously unselected package r-cran-jsonlite. 222s Preparing to unpack .../169-r-cran-jsonlite_1.9.1+dfsg-1_arm64.deb ... 222s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 222s Selecting previously unselected package r-cran-mime. 222s Preparing to unpack .../170-r-cran-mime_0.12-2_arm64.deb ... 222s Unpacking r-cran-mime (0.12-2) ... 222s Selecting previously unselected package r-cran-sys. 222s Preparing to unpack .../171-r-cran-sys_3.4.3-1_arm64.deb ... 222s Unpacking r-cran-sys (3.4.3-1) ... 222s Selecting previously unselected package r-cran-askpass. 222s Preparing to unpack .../172-r-cran-askpass_1.2.1-1_arm64.deb ... 222s Unpacking r-cran-askpass (1.2.1-1) ... 222s Selecting previously unselected package r-cran-openssl. 222s Preparing to unpack .../173-r-cran-openssl_2.3.2+dfsg-1_arm64.deb ... 222s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 222s Selecting previously unselected package r-cran-r6. 222s Preparing to unpack .../174-r-cran-r6_2.6.1-1_all.deb ... 222s Unpacking r-cran-r6 (2.6.1-1) ... 222s Selecting previously unselected package r-cran-httr. 222s Preparing to unpack .../175-r-cran-httr_1.4.7+dfsg-1_all.deb ... 222s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 222s Selecting previously unselected package r-cran-png. 222s Preparing to unpack .../176-r-cran-png_0.1-8-1build2_arm64.deb ... 222s Unpacking r-cran-png (0.1-8-1build2) ... 222s Selecting previously unselected package r-bioc-xvector. 222s Preparing to unpack .../177-r-bioc-xvector_0.46.0-2_arm64.deb ... 222s Unpacking r-bioc-xvector (0.46.0-2) ... 222s Selecting previously unselected package r-bioc-ucsc.utils. 222s Preparing to unpack .../178-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 222s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 222s Selecting previously unselected package r-bioc-genomeinfodbdata. 222s Preparing to unpack .../179-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 222s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 222s Selecting previously unselected package r-bioc-genomeinfodb. 222s Preparing to unpack .../180-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 222s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 222s Selecting previously unselected package r-cran-crayon. 222s Preparing to unpack .../181-r-cran-crayon_1.5.3-1_all.deb ... 222s Unpacking r-cran-crayon (1.5.3-1) ... 222s Selecting previously unselected package r-bioc-biostrings. 222s Preparing to unpack .../182-r-bioc-biostrings_2.74.1+dfsg-2_arm64.deb ... 222s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 222s Selecting previously unselected package r-bioc-keggrest. 222s Preparing to unpack .../183-r-bioc-keggrest_1.46.0+dfsg-3_all.deb ... 222s Unpacking r-bioc-keggrest (1.46.0+dfsg-3) ... 223s Selecting previously unselected package r-bioc-annotationdbi. 223s Preparing to unpack .../184-r-bioc-annotationdbi_1.68.0-2_all.deb ... 223s Unpacking r-bioc-annotationdbi (1.68.0-2) ... 223s Selecting previously unselected package r-cran-xml. 223s Preparing to unpack .../185-r-cran-xml_3.99-0.18-1_arm64.deb ... 223s Unpacking r-cran-xml (3.99-0.18-1) ... 223s Selecting previously unselected package r-cran-xtable. 223s Preparing to unpack .../186-r-cran-xtable_1%3a1.8-4-2_all.deb ... 223s Unpacking r-cran-xtable (1:1.8-4-2) ... 223s Selecting previously unselected package r-bioc-annotate. 223s Preparing to unpack .../187-r-bioc-annotate_1.84.0+dfsg-2_all.deb ... 223s Unpacking r-bioc-annotate (1.84.0+dfsg-2) ... 223s Selecting previously unselected package r-cran-generics. 223s Preparing to unpack .../188-r-cran-generics_0.1.3-1_all.deb ... 223s Unpacking r-cran-generics (0.1.3-1) ... 223s Selecting previously unselected package r-cran-magrittr. 223s Preparing to unpack .../189-r-cran-magrittr_2.0.3-1_arm64.deb ... 223s Unpacking r-cran-magrittr (2.0.3-1) ... 223s Selecting previously unselected package r-cran-utf8. 223s Preparing to unpack .../190-r-cran-utf8_1.2.4-1_arm64.deb ... 223s Unpacking r-cran-utf8 (1.2.4-1) ... 223s Selecting previously unselected package r-cran-pillar. 223s Preparing to unpack .../191-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 223s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 223s Selecting previously unselected package r-cran-fansi. 223s Preparing to unpack .../192-r-cran-fansi_1.0.6-1ubuntu1_arm64.deb ... 223s Unpacking r-cran-fansi (1.0.6-1ubuntu1) ... 223s Selecting previously unselected package r-cran-tibble. 223s Preparing to unpack .../193-r-cran-tibble_3.2.1+dfsg-3_arm64.deb ... 223s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 223s Selecting previously unselected package r-cran-withr. 223s Preparing to unpack .../194-r-cran-withr_3.0.2+dfsg-1_all.deb ... 223s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 223s Selecting previously unselected package r-cran-tidyselect. 223s Preparing to unpack .../195-r-cran-tidyselect_1.2.1+dfsg-1_arm64.deb ... 223s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 224s Selecting previously unselected package r-cran-dplyr. 224s Preparing to unpack .../196-r-cran-dplyr_1.1.4-4_arm64.deb ... 224s Unpacking r-cran-dplyr (1.1.4-4) ... 224s Selecting previously unselected package r-cran-purrr. 224s Preparing to unpack .../197-r-cran-purrr_1.0.4-1_arm64.deb ... 224s Unpacking r-cran-purrr (1.0.4-1) ... 224s Selecting previously unselected package r-cran-stringi. 224s Preparing to unpack .../198-r-cran-stringi_1.8.4-1build1_arm64.deb ... 224s Unpacking r-cran-stringi (1.8.4-1build1) ... 224s Selecting previously unselected package r-cran-stringr. 224s Preparing to unpack .../199-r-cran-stringr_1.5.1-1_all.deb ... 224s Unpacking r-cran-stringr (1.5.1-1) ... 224s Selecting previously unselected package r-cran-tidyr. 224s Preparing to unpack .../200-r-cran-tidyr_1.3.1-1_arm64.deb ... 224s Unpacking r-cran-tidyr (1.3.1-1) ... 224s Selecting previously unselected package r-cran-dbplyr. 224s Preparing to unpack .../201-r-cran-dbplyr_2.5.0+dfsg-1_all.deb ... 224s Unpacking r-cran-dbplyr (2.5.0+dfsg-1) ... 224s Selecting previously unselected package r-cran-filelock. 224s Preparing to unpack .../202-r-cran-filelock_1.0.3-1_arm64.deb ... 224s Unpacking r-cran-filelock (1.0.3-1) ... 224s Selecting previously unselected package r-bioc-biocfilecache. 224s Preparing to unpack .../203-r-bioc-biocfilecache_2.14.0+dfsg-2_all.deb ... 224s Unpacking r-bioc-biocfilecache (2.14.0+dfsg-2) ... 224s Selecting previously unselected package r-cran-base64enc. 224s Preparing to unpack .../204-r-cran-base64enc_0.1-3-3_arm64.deb ... 224s Unpacking r-cran-base64enc (0.1-3-3) ... 224s Selecting previously unselected package r-cran-digest. 224s Preparing to unpack .../205-r-cran-digest_0.6.37-1_arm64.deb ... 224s Unpacking r-cran-digest (0.6.37-1) ... 224s Selecting previously unselected package r-cran-htmltools. 224s Preparing to unpack .../206-r-cran-htmltools_0.5.8.1-1_arm64.deb ... 224s Unpacking r-cran-htmltools (0.5.8.1-1) ... 224s Selecting previously unselected package r-cran-evaluate. 224s Preparing to unpack .../207-r-cran-evaluate_1.0.3-1_all.deb ... 224s Unpacking r-cran-evaluate (1.0.3-1) ... 225s Selecting previously unselected package r-cran-xfun. 225s Preparing to unpack .../208-r-cran-xfun_0.51+dfsg-1_arm64.deb ... 225s Unpacking r-cran-xfun (0.51+dfsg-1) ... 225s Selecting previously unselected package r-cran-highr. 225s Preparing to unpack .../209-r-cran-highr_0.11+dfsg-1_all.deb ... 225s Unpacking r-cran-highr (0.11+dfsg-1) ... 225s Selecting previously unselected package r-cran-yaml. 225s Preparing to unpack .../210-r-cran-yaml_2.3.10-1_arm64.deb ... 225s Unpacking r-cran-yaml (2.3.10-1) ... 225s Selecting previously unselected package libjs-mathjax. 225s Preparing to unpack .../211-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 225s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 225s Selecting previously unselected package r-cran-knitr. 225s Preparing to unpack .../212-r-cran-knitr_1.50+dfsg-1_all.deb ... 225s Unpacking r-cran-knitr (1.50+dfsg-1) ... 225s Selecting previously unselected package r-cran-jquerylib. 225s Preparing to unpack .../213-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 225s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 225s Selecting previously unselected package r-cran-fs. 225s Preparing to unpack .../214-r-cran-fs_1.6.5+dfsg-1_arm64.deb ... 225s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 225s Selecting previously unselected package r-cran-rappdirs. 226s Preparing to unpack .../215-r-cran-rappdirs_0.3.3-1_arm64.deb ... 226s Unpacking r-cran-rappdirs (0.3.3-1) ... 226s Selecting previously unselected package r-cran-sass. 226s Preparing to unpack .../216-r-cran-sass_0.4.9+dfsg-1_arm64.deb ... 226s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 226s Selecting previously unselected package r-cran-bslib. 226s Preparing to unpack .../217-r-cran-bslib_0.9.0+dfsg-3_all.deb ... 226s Unpacking r-cran-bslib (0.9.0+dfsg-3) ... 226s Selecting previously unselected package r-cran-fontawesome. 226s Preparing to unpack .../218-r-cran-fontawesome_0.5.3-1_all.deb ... 226s Unpacking r-cran-fontawesome (0.5.3-1) ... 226s Selecting previously unselected package r-cran-tinytex. 226s Preparing to unpack .../219-r-cran-tinytex_0.56-1_all.deb ... 226s Unpacking r-cran-tinytex (0.56-1) ... 226s Selecting previously unselected package libjs-modernizr. 226s Preparing to unpack .../220-libjs-modernizr_3.13.0-0.1_all.deb ... 226s Unpacking libjs-modernizr (3.13.0-0.1) ... 226s Selecting previously unselected package r-cran-pkgkitten. 226s Preparing to unpack .../221-r-cran-pkgkitten_0.2.4-1_all.deb ... 226s Unpacking r-cran-pkgkitten (0.2.4-1) ... 226s Selecting previously unselected package r-cran-rcpp. 226s Preparing to unpack .../222-r-cran-rcpp_1.0.14-1_arm64.deb ... 226s Unpacking r-cran-rcpp (1.0.14-1) ... 226s Selecting previously unselected package r-cran-later. 226s Preparing to unpack .../223-r-cran-later_1.4.1+dfsg-1_arm64.deb ... 226s Unpacking r-cran-later (1.4.1+dfsg-1) ... 226s Selecting previously unselected package r-cran-promises. 226s Preparing to unpack .../224-r-cran-promises_1.3.2+dfsg-1_arm64.deb ... 226s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 226s Selecting previously unselected package r-cran-httpuv. 226s Preparing to unpack .../225-r-cran-httpuv_1.6.15+dfsg-1_arm64.deb ... 226s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 226s Selecting previously unselected package r-cran-sourcetools. 226s Preparing to unpack .../226-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 226s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 226s Selecting previously unselected package r-cran-commonmark. 226s Preparing to unpack .../227-r-cran-commonmark_1.9.5-1_arm64.deb ... 226s Unpacking r-cran-commonmark (1.9.5-1) ... 226s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 226s Preparing to unpack .../228-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 226s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 227s Selecting previously unselected package r-cran-shiny. 227s Preparing to unpack .../229-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 227s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 227s Selecting previously unselected package r-cran-rmarkdown. 227s Preparing to unpack .../230-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 227s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 227s Selecting previously unselected package r-cran-bookdown. 227s Preparing to unpack .../231-r-cran-bookdown_0.42+dfsg-1_all.deb ... 227s Unpacking r-cran-bookdown (0.42+dfsg-1) ... 227s Selecting previously unselected package r-cran-biocmanager. 227s Preparing to unpack .../232-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 227s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 227s Selecting previously unselected package tex-common. 227s Preparing to unpack .../233-tex-common_6.19_all.deb ... 227s Unpacking tex-common (6.19) ... 227s Selecting previously unselected package t1utils. 227s Preparing to unpack .../234-t1utils_1.41-4build3_arm64.deb ... 227s Unpacking t1utils (1.41-4build3) ... 227s Selecting previously unselected package texlive-binaries. 227s Preparing to unpack .../235-texlive-binaries_2024.20240313.70630+ds-6_arm64.deb ... 227s Unpacking texlive-binaries (2024.20240313.70630+ds-6) ... 227s Selecting previously unselected package texlive-base. 227s Preparing to unpack .../236-texlive-base_2024.20250309-1_all.deb ... 227s Unpacking texlive-base (2024.20250309-1) ... 228s Selecting previously unselected package texlive-latex-base. 228s Preparing to unpack .../237-texlive-latex-base_2024.20250309-1_all.deb ... 228s Unpacking texlive-latex-base (2024.20250309-1) ... 229s Selecting previously unselected package texlive-bibtex-extra. 229s Preparing to unpack .../238-texlive-bibtex-extra_2024.20250309-2_all.deb ... 229s Unpacking texlive-bibtex-extra (2024.20250309-2) ... 232s Selecting previously unselected package r-bioc-biocversion. 232s Preparing to unpack .../239-r-bioc-biocversion_3.20.0-2_all.deb ... 232s Unpacking r-bioc-biocversion (3.20.0-2) ... 232s Selecting previously unselected package r-bioc-biocstyle. 232s Preparing to unpack .../240-r-bioc-biocstyle_2.34.0+dfsg-1_all.deb ... 232s Unpacking r-bioc-biocstyle (2.34.0+dfsg-1) ... 232s Selecting previously unselected package r-cran-hms. 232s Preparing to unpack .../241-r-cran-hms_1.1.3-1_all.deb ... 232s Unpacking r-cran-hms (1.1.3-1) ... 232s Selecting previously unselected package r-cran-prettyunits. 232s Preparing to unpack .../242-r-cran-prettyunits_1.2.0-1_all.deb ... 232s Unpacking r-cran-prettyunits (1.2.0-1) ... 232s Selecting previously unselected package r-cran-progress. 232s Preparing to unpack .../243-r-cran-progress_1.2.3-1_all.deb ... 232s Unpacking r-cran-progress (1.2.3-1) ... 232s Selecting previously unselected package r-cran-httr2. 232s Preparing to unpack .../244-r-cran-httr2_1.1.1-1_all.deb ... 232s Unpacking r-cran-httr2 (1.1.1-1) ... 232s Selecting previously unselected package r-cran-xml2. 232s Preparing to unpack .../245-r-cran-xml2_1.3.8-1_arm64.deb ... 232s Unpacking r-cran-xml2 (1.3.8-1) ... 232s Selecting previously unselected package r-bioc-biomart. 232s Preparing to unpack .../246-r-bioc-biomart_2.62.1+dfsg-1_all.deb ... 232s Unpacking r-bioc-biomart (2.62.1+dfsg-1) ... 232s Selecting previously unselected package r-cran-lattice. 232s Preparing to unpack .../247-r-cran-lattice_0.22-7-1_arm64.deb ... 232s Unpacking r-cran-lattice (0.22-7-1) ... 232s Selecting previously unselected package r-cran-matrix. 232s Preparing to unpack .../248-r-cran-matrix_1.7-3-1_arm64.deb ... 232s Unpacking r-cran-matrix (1.7-3-1) ... 232s Selecting previously unselected package r-cran-matrixstats. 233s Preparing to unpack .../249-r-cran-matrixstats_1.5.0-1_arm64.deb ... 233s Unpacking r-cran-matrixstats (1.5.0-1) ... 233s Selecting previously unselected package r-bioc-matrixgenerics. 233s Preparing to unpack .../250-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 233s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 233s Selecting previously unselected package r-cran-abind. 233s Preparing to unpack .../251-r-cran-abind_1.4-8-1_all.deb ... 233s Unpacking r-cran-abind (1.4-8-1) ... 233s Selecting previously unselected package r-bioc-s4arrays. 233s Preparing to unpack .../252-r-bioc-s4arrays_1.6.0+dfsg-2_arm64.deb ... 233s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 233s Selecting previously unselected package r-bioc-sparsearray. 233s Preparing to unpack .../253-r-bioc-sparsearray_1.6.2+dfsg-2_arm64.deb ... 233s Unpacking r-bioc-sparsearray (1.6.2+dfsg-2) ... 233s Selecting previously unselected package r-bioc-delayedarray. 233s Preparing to unpack .../254-r-bioc-delayedarray_0.32.0+dfsg-2_arm64.deb ... 233s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 233s Selecting previously unselected package r-cran-survival. 233s Preparing to unpack .../255-r-cran-survival_3.8-3-1_arm64.deb ... 233s Unpacking r-cran-survival (3.8-3-1) ... 233s Selecting previously unselected package r-bioc-genefilter. 233s Preparing to unpack .../256-r-bioc-genefilter_1.88.0-2_arm64.deb ... 233s Unpacking r-bioc-genefilter (1.88.0-2) ... 233s Selecting previously unselected package r-bioc-genomicranges. 233s Preparing to unpack .../257-r-bioc-genomicranges_1.58.0+dfsg-2_arm64.deb ... 233s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 233s Selecting previously unselected package r-cran-statmod. 233s Preparing to unpack .../258-r-cran-statmod_1.5.0-1_arm64.deb ... 233s Unpacking r-cran-statmod (1.5.0-1) ... 233s Selecting previously unselected package r-bioc-limma. 233s Preparing to unpack .../259-r-bioc-limma_3.62.2+dfsg-1_arm64.deb ... 233s Unpacking r-bioc-limma (3.62.2+dfsg-1) ... 233s Selecting previously unselected package r-bioc-summarizedexperiment. 233s Preparing to unpack .../260-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 233s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 233s Selecting previously unselected package r-cran-codetools. 233s Preparing to unpack .../261-r-cran-codetools_0.2-20-1_all.deb ... 233s Unpacking r-cran-codetools (0.2-20-1) ... 233s Selecting previously unselected package r-cran-iterators. 233s Preparing to unpack .../262-r-cran-iterators_1.0.14-1_all.deb ... 233s Unpacking r-cran-iterators (1.0.14-1) ... 233s Selecting previously unselected package r-cran-foreach. 233s Preparing to unpack .../263-r-cran-foreach_1.5.2-1_all.deb ... 233s Unpacking r-cran-foreach (1.5.2-1) ... 234s Selecting previously unselected package r-cran-ff. 234s Preparing to unpack .../264-r-cran-ff_4.5.2+ds-1_arm64.deb ... 234s Unpacking r-cran-ff (4.5.2+ds-1) ... 234s Selecting previously unselected package r-bioc-oligoclasses. 234s Preparing to unpack .../265-r-bioc-oligoclasses_1.68.0-2_all.deb ... 234s Unpacking r-bioc-oligoclasses (1.68.0-2) ... 234s Selecting previously unselected package r-bioc-preprocesscore. 234s Preparing to unpack .../266-r-bioc-preprocesscore_1.68.0+ds-2_arm64.deb ... 234s Unpacking r-bioc-preprocesscore (1.68.0+ds-2) ... 234s Selecting previously unselected package r-bioc-oligo. 234s Preparing to unpack .../267-r-bioc-oligo_1.70.0+ds-3_arm64.deb ... 234s Unpacking r-bioc-oligo (1.70.0+ds-3) ... 234s Selecting previously unselected package r-cran-bitops. 234s Preparing to unpack .../268-r-cran-bitops_1.0-9-1_arm64.deb ... 234s Unpacking r-cran-bitops (1.0-9-1) ... 234s Selecting previously unselected package r-cran-rcolorbrewer. 234s Preparing to unpack .../269-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 234s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 234s Selecting previously unselected package r-cran-rcurl. 234s Preparing to unpack .../270-r-cran-rcurl_1.98-1.16+dfsg-1_arm64.deb ... 234s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 234s Selecting previously unselected package 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240s Setting up r-cran-progress (1.2.3-1) ... 240s Setting up r-base-dev (4.5.0-3) ... 240s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 240s Setting up r-bioc-sparsearray (1.6.2+dfsg-2) ... 240s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 240s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 240s Setting up r-cran-bslib (0.9.0+dfsg-3) ... 240s Setting up r-cran-tidyr (1.3.1-1) ... 240s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 240s Setting up r-cran-dbplyr (2.5.0+dfsg-1) ... 240s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 240s Setting up r-bioc-biocfilecache (2.14.0+dfsg-2) ... 240s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 240s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 240s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 240s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 240s Setting up r-cran-bookdown (0.42+dfsg-1) ... 240s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 240s Setting up r-bioc-keggrest (1.46.0+dfsg-3) ... 240s Setting up r-bioc-annotationdbi (1.68.0-2) ... 240s Setting up r-bioc-annotate (1.84.0+dfsg-2) ... 240s Setting up r-bioc-biomart (2.62.1+dfsg-1) ... 240s Setting up r-bioc-genefilter (1.88.0-2) ... 240s Setting up r-bioc-biocstyle (2.34.0+dfsg-1) ... 240s Setting up r-bioc-oligoclasses (1.68.0-2) ... 240s Setting up r-bioc-oligo (1.70.0+ds-3) ... 240s Processing triggers for man-db (2.13.0-1) ... 242s Processing triggers for install-info (7.1.1-1) ... 242s Processing triggers for libc-bin (2.41-6ubuntu1) ... 242s Processing triggers for tex-common (6.19) ... 243s Running updmap-sys. This may take some time... done. 243s Running mktexlsr /var/lib/texmf ... done. 243s Building format(s) --all. 281s This may take some time... done. 282s autopkgtest [14:43:41]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 282s autopkgtest [14:43:41]: test pkg-r-autopkgtest: [----------------------- 282s Test: Try to load the R library oligo 283s 283s R version 4.5.0 (2025-04-11) -- "How About a Twenty-Six" 283s Copyright (C) 2025 The R Foundation for Statistical Computing 283s Platform: aarch64-unknown-linux-gnu 283s 283s R is free software and comes with ABSOLUTELY NO WARRANTY. 283s You are welcome to redistribute it under certain conditions. 283s Type 'license()' or 'licence()' for distribution details. 283s 283s R is a collaborative project with many contributors. 283s Type 'contributors()' for more information and 283s 'citation()' on how to cite R or R packages in publications. 283s 283s Type 'demo()' for some demos, 'help()' for on-line help, or 283s 'help.start()' for an HTML browser interface to help. 283s Type 'q()' to quit R. 283s 283s > library('oligo') 283s Loading required package: BiocGenerics 283s 283s Attaching package: ‘BiocGenerics’ 283s 283s The following objects are masked from ‘package:stats’: 283s 283s IQR, mad, sd, var, xtabs 283s 283s The following objects are masked from ‘package:base’: 283s 283s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 283s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 283s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 283s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 283s Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff, 283s table, tapply, union, unique, unsplit, which.max, which.min 283s 283s Loading required package: oligoClasses 290s Welcome to oligoClasses version 1.68.0 290s Loading required package: Biobase 290s Welcome to Bioconductor 290s 290s Vignettes contain introductory material; view with 290s 'browseVignettes()'. To cite Bioconductor, see 290s 'citation("Biobase")', and for packages 'citation("pkgname")'. 290s 290s Loading required package: Biostrings 290s Loading required package: S4Vectors 290s Loading required package: stats4 290s 290s Attaching package: ‘S4Vectors’ 290s 290s The following object is masked from ‘package:utils’: 290s 290s findMatches 290s 290s The following objects are masked from ‘package:base’: 290s 290s expand.grid, I, unname 290s 290s Loading required package: IRanges 290s Loading required package: XVector 290s Loading required package: GenomeInfoDb 290s 290s Attaching package: ‘Biostrings’ 290s 290s The following object is masked from ‘package:base’: 290s 290s strsplit 290s 290s ================================================================================ 290s Welcome to oligo version 1.70.0 290s ================================================================================ 290s > 290s Other tests are currently unsupported! 290s They will be progressively added. 291s autopkgtest [14:43:50]: test pkg-r-autopkgtest: -----------------------] 291s pkg-r-autopkgtest PASS 291s autopkgtest [14:43:50]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 291s autopkgtest [14:43:50]: @@@@@@@@@@@@@@@@@@@@ summary 291s pkg-r-autopkgtest PASS 309s nova [W] Using flock in prodstack6-arm64 309s Creating nova instance adt-questing-arm64-r-bioc-oligo-20250502-143859-juju-7f2275-prod-proposed-migration-environment-2-b0f1150f-311f-4e5f-8143-271c34056737 from image adt/ubuntu-questing-arm64-server-20250502.img (UUID a0b7b7fd-ad05-4ea9-97eb-0f52dbbe98e1)... 309s nova [W] Timed out waiting for 61c21fed-10d4-497c-aef7-88aaf076c8c2 to get deleted.