0s autopkgtest [14:45:09]: starting date and time: 2025-05-02 14:45:09+0000 0s autopkgtest [14:45:09]: git checkout: 9986aa8c Merge branch 'skia/fix_network_interface' into 'ubuntu/production' 0s autopkgtest [14:45:09]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.gd2q5jfe/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base,src:r-bioc-bioccheck --apt-upgrade r-bioc-keggrest --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.5.0-3 r-bioc-bioccheck/1.42.1+dfsg-2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu2-ram4-disk20-arm64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@sto01-arm64-8.secgroup --name adt-questing-arm64-r-bioc-keggrest-20250502-143826-juju-7f2275-prod-proposed-migration-environment-15-7cc6bde3-77dc-4c51-b594-1c1552547456 --image adt/ubuntu-questing-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-autopkgtest-workers-arm64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 101s autopkgtest [14:46:50]: testbed dpkg architecture: arm64 101s autopkgtest [14:46:50]: testbed apt version: 3.0.0 101s autopkgtest [14:46:50]: @@@@@@@@@@@@@@@@@@@@ test bed setup 101s autopkgtest [14:46:50]: testbed release detected to be: None 102s autopkgtest [14:46:51]: updating testbed package index (apt update) 102s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB] 102s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 102s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 102s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 102s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [2024 kB] 102s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [44.2 kB] 102s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [164 kB] 103s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 Packages [204 kB] 103s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 Packages [1467 kB] 103s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse arm64 Packages [14.8 kB] 103s Fetched 4028 kB in 1s (7094 kB/s) 104s Reading package lists... 104s autopkgtest [14:46:53]: upgrading testbed (apt dist-upgrade and autopurge) 104s Reading package lists... 105s Building dependency tree... 105s Reading state information... 105s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 105s Starting 2 pkgProblemResolver with broken count: 0 105s Done 106s Entering ResolveByKeep 106s 106s Calculating upgrade... 107s The following packages will be upgraded: 107s libperl5.40 perl perl-base perl-modules-5.40 107s 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 107s Need to get 10.0 MB of archives. 107s After this operation, 0 B of additional disk space will be used. 107s Get:1 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libperl5.40 arm64 5.40.1-3 [4780 kB] 107s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 perl arm64 5.40.1-3 [262 kB] 107s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 perl-base arm64 5.40.1-3 [1786 kB] 107s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 perl-modules-5.40 all 5.40.1-3 [3217 kB] 107s Fetched 10.0 MB in 0s (24.6 MB/s) 108s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 85225 files and directories currently installed.) 108s Preparing to unpack .../libperl5.40_5.40.1-3_arm64.deb ... 108s Unpacking libperl5.40:arm64 (5.40.1-3) over (5.40.1-2ubuntu0.1) ... 108s Preparing to unpack .../perl_5.40.1-3_arm64.deb ... 108s Unpacking perl (5.40.1-3) over (5.40.1-2ubuntu0.1) ... 108s Preparing to unpack .../perl-base_5.40.1-3_arm64.deb ... 108s Unpacking perl-base (5.40.1-3) over (5.40.1-2ubuntu0.1) ... 108s Setting up perl-base (5.40.1-3) ... 108s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 85225 files and directories currently installed.) 108s Preparing to unpack .../perl-modules-5.40_5.40.1-3_all.deb ... 108s Unpacking perl-modules-5.40 (5.40.1-3) over (5.40.1-2ubuntu0.1) ... 108s Setting up perl-modules-5.40 (5.40.1-3) ... 108s Setting up libperl5.40:arm64 (5.40.1-3) ... 108s Setting up perl (5.40.1-3) ... 108s Processing triggers for man-db (2.13.0-1) ... 109s Processing triggers for libc-bin (2.41-6ubuntu1) ... 109s Reading package lists... 109s Building dependency tree... 109s Reading state information... 110s Starting pkgProblemResolver with broken count: 0 110s Starting 2 pkgProblemResolver with broken count: 0 110s Done 110s Solving dependencies... 111s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 113s autopkgtest [14:47:02]: testbed running kernel: Linux 6.14.0-15-generic #15-Ubuntu SMP PREEMPT_DYNAMIC Sun Apr 6 14:37:51 UTC 2025 113s autopkgtest [14:47:02]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-keggrest 114s Get:1 http://ftpmaster.internal/ubuntu questing/universe r-bioc-keggrest 1.46.0+dfsg-2 (dsc) [2147 B] 114s Get:2 http://ftpmaster.internal/ubuntu questing/universe r-bioc-keggrest 1.46.0+dfsg-2 (tar) [16.4 kB] 114s Get:3 http://ftpmaster.internal/ubuntu questing/universe r-bioc-keggrest 1.46.0+dfsg-2 (diff) [5980 B] 114s gpgv: Signature made Sun Jan 12 19:16:45 2025 UTC 114s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 114s gpgv: issuer "crusoe@debian.org" 114s gpgv: Can't check signature: No public key 114s dpkg-source: warning: cannot verify inline signature for ./r-bioc-keggrest_1.46.0+dfsg-2.dsc: no acceptable signature found 114s autopkgtest [14:47:03]: testing package r-bioc-keggrest version 1.46.0+dfsg-2 115s autopkgtest [14:47:04]: build not needed 116s autopkgtest [14:47:05]: test pkg-r-autopkgtest: preparing testbed 116s Reading package lists... 116s Building dependency tree... 116s Reading state information... 117s Starting pkgProblemResolver with broken count: 13 117s Starting 2 pkgProblemResolver with broken count: 13 117s Investigating (0) r-cran-shiny:arm64 < none -> 1.10.0+dfsg-2 @un puN Ib > 117s Broken r-cran-shiny:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 0.4.10) 117s Considering r-cran-rlang:arm64 8 as a solution to r-cran-shiny:arm64 56 117s Considering r-cran-rlang:arm64 8 as a solution to r-cran-shiny:arm64 56 117s Investigating (0) r-cran-sass:arm64 < none -> 0.4.9+dfsg-1 @un puN Ib > 117s Broken r-cran-sass:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 0.4.10) 117s Considering r-cran-rlang:arm64 8 as a solution to r-cran-sass:arm64 54 117s Considering r-cran-rlang:arm64 8 as a solution to r-cran-sass:arm64 54 117s Investigating (0) r-cran-bslib:arm64 < none -> 0.9.0+dfsg-1syncable1 @un puN Ib > 117s Broken r-cran-bslib:arm64 Depends on r-cran-rlang:arm64 < none @un pH > 117s Considering r-cran-rlang:arm64 8 as a solution to r-cran-bslib:arm64 51 117s Considering r-cran-rlang:arm64 8 as a solution to r-cran-bslib:arm64 51 117s Investigating (0) r-cran-htmltools:arm64 < none -> 0.5.8.1-1 @un puN Ib > 117s Broken r-cran-htmltools:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.0.0) 117s Considering r-cran-rlang:arm64 8 as a solution to r-cran-htmltools:arm64 41 117s Considering r-cran-rlang:arm64 8 as a solution to r-cran-htmltools:arm64 41 117s Investigating (0) r-cran-fontawesome:arm64 < none -> 0.5.3-1 @un puN Ib > 117s Broken r-cran-fontawesome:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.0.6) 117s Considering r-cran-rlang:arm64 8 as a solution to r-cran-fontawesome:arm64 29 117s Considering r-cran-rlang:arm64 8 as a solution to r-cran-fontawesome:arm64 29 117s Investigating (0) r-cran-later:arm64 < none -> 1.4.1+dfsg-1 @un puN Ib > 117s Broken r-cran-later:arm64 Depends on r-cran-rlang:arm64 < none @un pH > 117s Considering r-cran-rlang:arm64 8 as a solution to r-cran-later:arm64 18 117s Considering r-cran-rlang:arm64 8 as a solution to r-cran-later:arm64 18 117s Investigating (0) r-cran-cachem:arm64 < none -> 1.1.0-1 @un puN Ib > 117s Broken r-cran-cachem:arm64 Depends on r-cran-rlang:arm64 < none @un pH > 117s Considering r-cran-rlang:arm64 8 as a solution to r-cran-cachem:arm64 10 117s Considering r-cran-rlang:arm64 8 as a solution to r-cran-cachem:arm64 10 117s Investigating (0) r-cran-lifecycle:arm64 < none -> 1.0.4+dfsg-1 @un puN Ib > 117s Broken r-cran-lifecycle:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.1.0) 117s Considering r-cran-rlang:arm64 8 as a solution to r-cran-lifecycle:arm64 9 117s Considering r-cran-rlang:arm64 8 as a solution to r-cran-lifecycle:arm64 9 117s Investigating (0) r-cran-promises:arm64 < none -> 1.3.2+dfsg-1 @un puN Ib > 117s Broken r-cran-promises:arm64 Depends on r-cran-rlang:arm64 < none @un pH > 117s Considering r-cran-rlang:arm64 8 as a solution to r-cran-promises:arm64 8 117s Considering r-cran-rlang:arm64 8 as a solution to r-cran-promises:arm64 8 117s Investigating (0) r-cran-memoise:arm64 < none -> 2.0.1-1 @un puN Ib > 117s Broken r-cran-memoise:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 0.4.10) 117s Considering r-cran-rlang:arm64 8 as a solution to r-cran-memoise:arm64 3 117s Considering r-cran-rlang:arm64 8 as a solution to r-cran-memoise:arm64 3 117s Investigating (0) r-bioc-xvector:arm64 < none -> 0.46.0-2 @un puN Ib > 117s Broken r-bioc-xvector:arm64 Depends on r-bioc-iranges:arm64 < none @un pH > (>= 2.23.9) 117s Considering r-bioc-iranges:arm64 0 as a solution to r-bioc-xvector:arm64 0 117s Considering r-bioc-iranges:arm64 0 as a solution to r-bioc-xvector:arm64 0 117s Investigating (0) r-bioc-genomeinfodb:arm64 < none -> 1.42.3+dfsg-1 @un puN Ib > 117s Broken r-bioc-genomeinfodb:arm64 Depends on r-bioc-iranges:arm64 < none @un pH > (>= 2.13.12) 117s Considering r-bioc-iranges:arm64 0 as a solution to r-bioc-genomeinfodb:arm64 0 117s Considering r-bioc-iranges:arm64 0 as a solution to r-bioc-genomeinfodb:arm64 0 117s Investigating (0) r-bioc-biostrings:arm64 < none -> 2.74.1+dfsg-2 @un puN Ib > 117s Broken r-bioc-biostrings:arm64 Depends on r-bioc-iranges:arm64 < none @un pH > (>= 2.31.2) 117s Considering r-bioc-iranges:arm64 0 as a solution to r-bioc-biostrings:arm64 0 117s Considering r-bioc-iranges:arm64 0 as a solution to r-bioc-biostrings:arm64 0 117s Done 117s Some packages could not be installed. This may mean that you have 117s requested an impossible situation or if you are using the unstable 117s distribution that some required packages have not yet been created 117s or been moved out of Incoming. 117s The following information may help to resolve the situation: 117s 117s The following packages have unmet dependencies: 117s r-bioc-biostrings : Depends: r-bioc-iranges (>= 2.31.2) but it is not installable 117s r-bioc-genomeinfodb : Depends: r-bioc-iranges (>= 2.13.12) but it is not installable 117s r-bioc-xvector : Depends: r-bioc-iranges (>= 2.23.9) but it is not installable 117s r-cran-bslib : Depends: r-cran-rlang but it is not installable 117s r-cran-cachem : Depends: r-cran-rlang but it is not installable 117s r-cran-fontawesome : Depends: r-cran-rlang (>= 1.0.6) but it is not installable 117s r-cran-htmltools : Depends: r-cran-rlang (>= 1.0.0) but it is not installable 117s r-cran-later : Depends: r-cran-rlang but it is not installable 117s r-cran-lifecycle : Depends: r-cran-rlang (>= 1.1.0) but it is not installable 117s r-cran-memoise : Depends: r-cran-rlang (>= 0.4.10) but it is not installable 117s r-cran-promises : Depends: r-cran-rlang but it is not installable 117s r-cran-sass : Depends: r-cran-rlang (>= 0.4.10) but it is not installable 117s r-cran-shiny : Depends: r-cran-rlang (>= 0.4.10) but it is not installable 117s E: Unable to correct problems, you have held broken packages. 117s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from questing-proposed 117s Reading package lists... 118s Building dependency tree... 118s Reading state information... 118s Starting pkgProblemResolver with broken count: 0 118s Starting 2 pkgProblemResolver with broken count: 0 118s Done 119s The following NEW packages will be installed: 119s build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu 119s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 119s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 119s g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14 119s gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14 119s gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 119s javascript-common libasan8 libbibtex-parser-perl libblas-dev libblas3 119s libbz2-dev libcairo2 libcc1-0 libdatrie1 libdeflate-dev libdeflate0 119s libfontconfig1 libgcc-14-dev libgfortran-14-dev libgfortran5 libgomp1 119s libgraphite2-3 libharfbuzz0b libhwasan0 libice6 libicu-dev libio-string-perl 119s libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev 119s libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 119s libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables 119s libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr 119s libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js 119s libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker 119s libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblerc4 119s liblsan0 liblua5.4-0 liblzma-dev libmpc3 libmpfi0 libncurses-dev 119s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 119s libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 119s libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libptexenc1 libreadline-dev 119s libsharpyuv0 libsm6 libstdc++-14-dev libsynctex2 libtcl8.6 libteckit0 119s libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libtsan2 119s libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 119s libxpm4 libxrender1 libxss1 libxt6t64 libzstd-dev libzzip-0-13t64 littler 119s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 119s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 119s r-bioc-biocgenerics r-bioc-biocstyle r-bioc-biocversion r-bioc-biostrings 119s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-iranges r-bioc-keggrest 119s r-bioc-s4vectors r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc 119s r-cran-askpass r-cran-base64enc r-cran-biocmanager r-cran-bookdown 119s r-cran-bslib r-cran-cachem r-cran-cli r-cran-commonmark r-cran-crayon 119s r-cran-curl r-cran-digest r-cran-evaluate r-cran-fastmap r-cran-fontawesome 119s r-cran-fs r-cran-glue r-cran-highr r-cran-htmltools r-cran-httpuv 119s r-cran-httr r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-later 119s r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-markdown 119s r-cran-memoise r-cran-mime r-cran-openssl r-cran-pkgkitten r-cran-png 119s r-cran-promises r-cran-r6 r-cran-rappdirs r-cran-rcpp r-cran-rlang 119s r-cran-rmarkdown r-cran-runit r-cran-sass r-cran-shiny r-cran-sourcetools 119s r-cran-sys r-cran-tinytex r-cran-withr r-cran-xfun r-cran-xtable r-cran-yaml 119s t1utils tex-common texlive-base texlive-bibtex-extra texlive-binaries 119s texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev 119s The following packages will be upgraded: 119s gcc-14-base gcc-15-base libatomic1 libgcc-s1 libstdc++6 libtirpc-common 119s libtirpc3t64 libzstd1 zstd 119s 9 upgraded, 211 newly installed, 0 to remove and 86 not upgraded. 119s Need to get 353 MB of archives. 119s After this operation, 1070 MB of additional disk space will be used. 119s Get:1 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 gcc-15-base arm64 15.1.0-1ubuntu1 [54.5 kB] 119s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libgcc-s1 arm64 15.1.0-1ubuntu1 [61.0 kB] 119s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libatomic1 arm64 15.1.0-1ubuntu1 [11.3 kB] 119s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libstdc++6 arm64 15.1.0-1ubuntu1 [761 kB] 119s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libzstd1 arm64 1.5.7+dfsg-1 [283 kB] 119s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 gcc-14-base arm64 14.2.0-22ubuntu1 [55.2 kB] 119s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libtirpc-common all 1.3.6+ds-1 [8198 B] 119s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libtirpc3t64 arm64 1.3.6+ds-1 [83.9 kB] 119s Get:9 http://ftpmaster.internal/ubuntu questing/main arm64 libisl23 arm64 0.27-1 [676 kB] 119s Get:10 http://ftpmaster.internal/ubuntu questing/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB] 119s Get:11 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-22ubuntu1 [10.6 MB] 120s Get:12 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 cpp-14 arm64 14.2.0-22ubuntu1 [1030 B] 120s Get:13 http://ftpmaster.internal/ubuntu questing/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [5558 B] 120s Get:14 http://ftpmaster.internal/ubuntu questing/main arm64 cpp arm64 4:14.2.0-1ubuntu1 [22.4 kB] 120s Get:15 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libcc1-0 arm64 15.1.0-1ubuntu1 [49.1 kB] 120s Get:16 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libgomp1 arm64 15.1.0-1ubuntu1 [147 kB] 120s Get:17 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libitm1 arm64 15.1.0-1ubuntu1 [28.1 kB] 120s Get:18 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libasan8 arm64 15.1.0-1ubuntu1 [2922 kB] 120s Get:19 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 liblsan0 arm64 15.1.0-1ubuntu1 [1317 kB] 120s Get:20 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libtsan2 arm64 15.1.0-1ubuntu1 [2691 kB] 120s Get:21 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libubsan1 arm64 15.1.0-1ubuntu1 [1176 kB] 120s Get:22 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libhwasan0 arm64 15.1.0-1ubuntu1 [1639 kB] 120s Get:23 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libgcc-14-dev arm64 14.2.0-22ubuntu1 [2593 kB] 120s Get:24 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-22ubuntu1 [20.9 MB] 121s Get:25 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 gcc-14 arm64 14.2.0-22ubuntu1 [536 kB] 121s Get:26 http://ftpmaster.internal/ubuntu questing/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1200 B] 121s Get:27 http://ftpmaster.internal/ubuntu questing/main arm64 gcc arm64 4:14.2.0-1ubuntu1 [4998 B] 121s Get:28 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libstdc++-14-dev arm64 14.2.0-22ubuntu1 [2820 kB] 121s Get:29 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-22ubuntu1 [12.1 MB] 121s Get:30 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 g++-14 arm64 14.2.0-22ubuntu1 [24.0 kB] 121s Get:31 http://ftpmaster.internal/ubuntu questing/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [956 B] 121s Get:32 http://ftpmaster.internal/ubuntu questing/main arm64 g++ arm64 4:14.2.0-1ubuntu1 [1080 B] 121s Get:33 http://ftpmaster.internal/ubuntu questing/main arm64 build-essential arm64 12.12ubuntu1 [5082 B] 121s Get:34 http://ftpmaster.internal/ubuntu questing/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB] 121s Get:35 http://ftpmaster.internal/ubuntu questing/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 121s Get:36 http://ftpmaster.internal/ubuntu questing/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 121s Get:37 http://ftpmaster.internal/ubuntu questing/main arm64 fontconfig-config arm64 2.15.0-2.2ubuntu1 [37.9 kB] 121s Get:38 http://ftpmaster.internal/ubuntu questing/main arm64 libfontconfig1 arm64 2.15.0-2.2ubuntu1 [144 kB] 121s Get:39 http://ftpmaster.internal/ubuntu questing/main arm64 fontconfig arm64 2.15.0-2.2ubuntu1 [191 kB] 121s Get:40 http://ftpmaster.internal/ubuntu questing/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 121s Get:41 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-4 [119 kB] 121s Get:42 http://ftpmaster.internal/ubuntu questing/universe arm64 fonts-lmodern all 2.005-1 [4799 kB] 121s Get:43 http://ftpmaster.internal/ubuntu questing/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 121s Get:44 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libgfortran5 arm64 15.1.0-1ubuntu1 [444 kB] 121s Get:45 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libgfortran-14-dev arm64 14.2.0-22ubuntu1 [498 kB] 121s Get:46 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-22ubuntu1 [11.4 MB] 121s Get:47 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 gfortran-14 arm64 14.2.0-22ubuntu1 [14.4 kB] 121s Get:48 http://ftpmaster.internal/ubuntu questing/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1022 B] 121s Get:49 http://ftpmaster.internal/ubuntu questing/main arm64 gfortran arm64 4:14.2.0-1ubuntu1 [1166 B] 121s Get:50 http://ftpmaster.internal/ubuntu questing/main arm64 icu-devtools arm64 76.1-1ubuntu2 [213 kB] 121s Get:51 http://ftpmaster.internal/ubuntu questing/main arm64 javascript-common all 12 [5216 B] 121s Get:52 http://ftpmaster.internal/ubuntu questing/main arm64 libio-string-perl all 1.08-4 [11.1 kB] 121s Get:53 http://ftpmaster.internal/ubuntu questing/universe arm64 liblatex-tounicode-perl all 0.55-1 [28.8 kB] 121s Get:54 http://ftpmaster.internal/ubuntu questing/universe arm64 libbibtex-parser-perl all 1.05+dfsg-1 [16.5 kB] 121s Get:55 http://ftpmaster.internal/ubuntu questing/main arm64 libblas3 arm64 3.12.1-2 [161 kB] 121s Get:56 http://ftpmaster.internal/ubuntu questing/main arm64 libblas-dev arm64 3.12.1-2 [126 kB] 121s Get:57 http://ftpmaster.internal/ubuntu questing/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB] 121s Get:58 http://ftpmaster.internal/ubuntu questing/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 121s Get:59 http://ftpmaster.internal/ubuntu questing/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 121s Get:60 http://ftpmaster.internal/ubuntu questing/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 121s Get:61 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libxrender1 arm64 1:0.9.12-1 [19.5 kB] 121s Get:62 http://ftpmaster.internal/ubuntu questing/main arm64 libcairo2 arm64 1.18.4-1 [560 kB] 121s Get:63 http://ftpmaster.internal/ubuntu questing/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 121s Get:64 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libdeflate0 arm64 1.23-2 [46.4 kB] 121s Get:65 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libdeflate-dev arm64 1.23-2 [53.6 kB] 121s Get:66 http://ftpmaster.internal/ubuntu questing/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 121s Get:67 http://ftpmaster.internal/ubuntu questing/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB] 121s Get:68 http://ftpmaster.internal/ubuntu questing/main arm64 x11-common all 1:7.7+23ubuntu4 [21.8 kB] 121s Get:69 http://ftpmaster.internal/ubuntu questing/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 121s Get:70 http://ftpmaster.internal/ubuntu questing/main arm64 libicu-dev arm64 76.1-1ubuntu2 [12.2 MB] 121s Get:71 http://ftpmaster.internal/ubuntu questing/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB] 121s Get:72 http://ftpmaster.internal/ubuntu questing/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB] 121s Get:73 http://ftpmaster.internal/ubuntu questing/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 121s Get:74 http://ftpmaster.internal/ubuntu questing/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 121s Get:75 http://ftpmaster.internal/ubuntu questing/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 121s Get:76 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 libjs-bootstrap all 3.4.1+dfsg-4 [129 kB] 121s Get:77 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 121s Get:78 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB] 121s Get:79 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 121s Get:80 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 121s Get:81 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 121s Get:82 http://ftpmaster.internal/ubuntu questing/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 121s Get:83 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 121s Get:84 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 121s Get:85 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 121s Get:86 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 121s Get:87 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 121s Get:88 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 121s Get:89 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 121s Get:90 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 121s Get:91 http://ftpmaster.internal/ubuntu questing/universe arm64 libkpathsea6 arm64 2024.20240313.70630+ds-6 [64.4 kB] 121s Get:92 http://ftpmaster.internal/ubuntu questing/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB] 122s Get:93 http://ftpmaster.internal/ubuntu questing/main arm64 liblapack-dev arm64 3.12.1-2 [4439 kB] 122s Get:94 http://ftpmaster.internal/ubuntu questing/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 122s Get:95 http://ftpmaster.internal/ubuntu questing/main arm64 liblua5.4-0 arm64 5.4.7-1 [158 kB] 122s Get:96 http://ftpmaster.internal/ubuntu questing/universe arm64 libmpfi0 arm64 1.5.4+ds-4 [35.3 kB] 122s Get:97 http://ftpmaster.internal/ubuntu questing/main arm64 libncurses-dev arm64 6.5+20250216-2 [389 kB] 122s Get:98 http://ftpmaster.internal/ubuntu questing/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 122s Get:99 http://ftpmaster.internal/ubuntu questing/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 122s Get:100 http://ftpmaster.internal/ubuntu questing/main arm64 libpango-1.0-0 arm64 1.56.3-1 [238 kB] 122s Get:101 http://ftpmaster.internal/ubuntu questing/main arm64 libpangoft2-1.0-0 arm64 1.56.3-1 [49.8 kB] 122s Get:102 http://ftpmaster.internal/ubuntu questing/main arm64 libpangocairo-1.0-0 arm64 1.56.3-1 [27.6 kB] 122s Get:103 http://ftpmaster.internal/ubuntu questing/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB] 122s Get:104 http://ftpmaster.internal/ubuntu questing/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB] 122s Get:105 http://ftpmaster.internal/ubuntu questing/main arm64 libpcre2-16-0 arm64 10.45-1 [222 kB] 122s Get:106 http://ftpmaster.internal/ubuntu questing/main arm64 libpcre2-32-0 arm64 10.45-1 [210 kB] 122s Get:107 http://ftpmaster.internal/ubuntu questing/main arm64 libpcre2-posix3 arm64 10.45-1 [7084 B] 122s Get:108 http://ftpmaster.internal/ubuntu questing/main arm64 libpcre2-dev arm64 10.45-1 [768 kB] 122s Get:109 http://ftpmaster.internal/ubuntu questing/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB] 122s Get:110 http://ftpmaster.internal/ubuntu questing/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB] 122s Get:111 http://ftpmaster.internal/ubuntu questing/main arm64 libpng-dev arm64 1.6.47-1.1 [269 kB] 122s Get:112 http://ftpmaster.internal/ubuntu questing/universe arm64 libpotrace0 arm64 1.16-2build1 [16.0 kB] 122s Get:113 http://ftpmaster.internal/ubuntu questing/universe arm64 libptexenc1 arm64 2024.20240313.70630+ds-6 [41.7 kB] 122s Get:114 http://ftpmaster.internal/ubuntu questing/main arm64 libreadline-dev arm64 8.2-6 [179 kB] 122s Get:115 http://ftpmaster.internal/ubuntu questing/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB] 122s Get:116 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libsm6 arm64 2:1.2.6-1 [16.6 kB] 122s Get:117 http://ftpmaster.internal/ubuntu questing/universe arm64 libsynctex2 arm64 2024.20240313.70630+ds-6 [60.4 kB] 122s Get:118 http://ftpmaster.internal/ubuntu questing/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB] 122s Get:119 http://ftpmaster.internal/ubuntu questing/universe arm64 libteckit0 arm64 2.5.12+ds1-1 [405 kB] 122s Get:120 http://ftpmaster.internal/ubuntu questing/universe arm64 libtexlua53-5 arm64 2024.20240313.70630+ds-6 [122 kB] 122s Get:121 http://ftpmaster.internal/ubuntu questing/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 122s Get:122 http://ftpmaster.internal/ubuntu questing/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB] 122s Get:123 http://ftpmaster.internal/ubuntu questing/main arm64 libtiff6 arm64 4.7.0-3ubuntu1 [197 kB] 122s Get:124 http://ftpmaster.internal/ubuntu questing/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 122s Get:125 http://ftpmaster.internal/ubuntu questing/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 122s Get:126 http://ftpmaster.internal/ubuntu questing/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB] 122s Get:127 http://ftpmaster.internal/ubuntu questing/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 122s Get:128 http://ftpmaster.internal/ubuntu questing/main arm64 libxmu6 arm64 2:1.1.3-3build2 [47.5 kB] 122s Get:129 http://ftpmaster.internal/ubuntu questing/main arm64 libxpm4 arm64 1:3.5.17-1build2 [35.1 kB] 122s Get:130 http://ftpmaster.internal/ubuntu questing/main arm64 libxaw7 arm64 2:1.0.16-1 [184 kB] 122s Get:131 http://ftpmaster.internal/ubuntu questing/main arm64 libxi6 arm64 2:1.8.2-1 [32.4 kB] 122s Get:132 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libzstd-dev arm64 1.5.7+dfsg-1 [358 kB] 122s Get:133 http://ftpmaster.internal/ubuntu questing/universe arm64 libzzip-0-13t64 arm64 0.13.78+dfsg.1-0.1 [30.8 kB] 122s Get:134 http://ftpmaster.internal/ubuntu questing/main arm64 zip arm64 3.0-14ubuntu2 [173 kB] 122s Get:135 http://ftpmaster.internal/ubuntu questing/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 122s Get:136 http://ftpmaster.internal/ubuntu questing/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 122s Get:137 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-base-core arm64 4.5.0-3 [28.7 MB] 122s Get:138 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-cran-littler arm64 0.3.21-1 [99.7 kB] 122s Get:139 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 littler all 0.3.21-1 [2584 B] 122s Get:140 http://ftpmaster.internal/ubuntu questing/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 122s Get:141 http://ftpmaster.internal/ubuntu questing/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 122s Get:142 http://ftpmaster.internal/ubuntu questing/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 122s Get:143 http://ftpmaster.internal/ubuntu questing/universe arm64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 122s Get:144 http://ftpmaster.internal/ubuntu questing/universe arm64 pandoc arm64 3.1.11.1+ds-2 [28.1 MB] 123s Get:145 http://ftpmaster.internal/ubuntu questing/main arm64 liblzma-dev arm64 5.6.4-1ubuntu1 [180 kB] 123s Get:146 http://ftpmaster.internal/ubuntu questing/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB] 123s Get:147 http://ftpmaster.internal/ubuntu questing/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB] 123s Get:148 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libtirpc-dev arm64 1.3.6+ds-1 [202 kB] 123s Get:149 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-base-dev all 4.5.0-3 [4188 B] 123s Get:150 http://ftpmaster.internal/ubuntu questing/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 123s Get:151 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 123s Get:152 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 123s Get:153 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB] 123s Get:154 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB] 123s Get:155 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-cran-rlang arm64 1.1.5-3 [1706 kB] 123s Get:156 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB] 123s Get:157 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-evaluate all 1.0.3-1 [114 kB] 123s Get:158 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-xfun arm64 0.51+dfsg-1 [573 kB] 123s Get:159 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 123s Get:160 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB] 123s Get:161 http://ftpmaster.internal/ubuntu questing/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 123s Get:162 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-knitr all 1.50+dfsg-1 [840 kB] 123s Get:163 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB] 123s Get:164 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 123s Get:165 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-jsonlite arm64 1.9.1+dfsg-1 [445 kB] 123s Get:166 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB] 123s Get:167 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 123s Get:168 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 123s Get:169 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 123s Get:170 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 123s Get:171 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB] 123s Get:172 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB] 123s Get:173 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 123s Get:174 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB] 123s Get:175 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-cran-bslib all 0.9.0+dfsg-3 [4562 kB] 123s Get:176 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 123s Get:177 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-tinytex all 0.56-1 [148 kB] 123s Get:178 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-modernizr all 3.13.0-0.1 [101 kB] 123s Get:179 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 123s Get:180 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-rcpp arm64 1.0.14-1 [1978 kB] 123s Get:181 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-later arm64 1.4.1+dfsg-1 [141 kB] 123s Get:182 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 123s Get:183 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-promises arm64 1.3.2+dfsg-1 [290 kB] 123s Get:184 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB] 123s Get:185 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 123s Get:186 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 123s Get:187 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB] 123s Get:188 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 123s Get:189 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-commonmark arm64 1.9.5-1 [130 kB] 123s Get:190 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 123s Get:191 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 123s Get:192 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 123s Get:193 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-bookdown all 0.42+dfsg-1 [1409 kB] 123s Get:194 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 123s Get:195 http://ftpmaster.internal/ubuntu questing/universe arm64 tex-common all 6.19 [29.8 kB] 123s Get:196 http://ftpmaster.internal/ubuntu questing/main arm64 t1utils arm64 1.41-4build3 [61.0 kB] 124s Get:197 http://ftpmaster.internal/ubuntu questing/universe arm64 texlive-binaries arm64 2024.20240313.70630+ds-6 [8349 kB] 124s Get:198 http://ftpmaster.internal/ubuntu questing/universe arm64 texlive-base all 2024.20250309-1 [22.7 MB] 124s Get:199 http://ftpmaster.internal/ubuntu questing/universe arm64 texlive-latex-base all 2024.20250309-1 [1276 kB] 124s Get:200 http://ftpmaster.internal/ubuntu questing/universe arm64 texlive-bibtex-extra all 2024.20250309-2 [79.3 MB] 125s Get:201 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-biocversion all 3.20.0-2 [11.1 kB] 125s Get:202 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-biocstyle all 2.34.0+dfsg-1 [451 kB] 125s Get:203 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-s4vectors arm64 0.44.0+dfsg-2 [2054 kB] 125s Get:204 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-bioc-iranges arm64 2.40.1-3 [2301 kB] 125s Get:205 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 125s Get:206 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-xvector arm64 0.46.0-2 [618 kB] 125s Get:207 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-curl arm64 6.2.1+dfsg-1ubuntu1 [196 kB] 125s Get:208 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-sys arm64 3.4.3-1 [45.2 kB] 125s Get:209 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-askpass arm64 1.2.1-1 [24.8 kB] 125s Get:210 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-openssl arm64 2.3.2+dfsg-1 [406 kB] 125s Get:211 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 125s Get:212 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 125s Get:213 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 125s Get:214 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 125s Get:215 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-biostrings arm64 2.74.1+dfsg-2 [13.3 MB] 126s Get:216 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-png arm64 0.1-8-1build2 [40.1 kB] 126s Get:217 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-bioc-keggrest all 1.46.0+dfsg-3 [183 kB] 126s Get:218 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-markdown all 1.13-1 [162 kB] 126s Get:219 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-runit all 0.4.33-1 [377 kB] 126s Get:220 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 zstd arm64 1.5.7+dfsg-1 [607 kB] 126s Preconfiguring packages ... 126s Fetched 353 MB in 7s (51.1 MB/s) 126s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 85225 files and directories currently installed.) 126s Preparing to unpack .../gcc-15-base_15.1.0-1ubuntu1_arm64.deb ... 126s Unpacking gcc-15-base:arm64 (15.1.0-1ubuntu1) over (15-20250404-0ubuntu1) ... 126s Setting up gcc-15-base:arm64 (15.1.0-1ubuntu1) ... 126s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 85225 files and directories currently installed.) 126s Preparing to unpack .../libgcc-s1_15.1.0-1ubuntu1_arm64.deb ... 126s Unpacking libgcc-s1:arm64 (15.1.0-1ubuntu1) over (15-20250404-0ubuntu1) ... 126s Setting up libgcc-s1:arm64 (15.1.0-1ubuntu1) ... 127s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 85225 files and directories currently installed.) 127s Preparing to unpack .../libatomic1_15.1.0-1ubuntu1_arm64.deb ... 127s Unpacking libatomic1:arm64 (15.1.0-1ubuntu1) over (15-20250404-0ubuntu1) ... 127s Preparing to unpack .../libstdc++6_15.1.0-1ubuntu1_arm64.deb ... 127s Unpacking libstdc++6:arm64 (15.1.0-1ubuntu1) over (15-20250404-0ubuntu1) ... 127s Setting up libstdc++6:arm64 (15.1.0-1ubuntu1) ... 127s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 85225 files and directories currently installed.) 127s Preparing to unpack .../libzstd1_1.5.7+dfsg-1_arm64.deb ... 127s Unpacking libzstd1:arm64 (1.5.7+dfsg-1) over (1.5.6+dfsg-2) ... 127s Setting up libzstd1:arm64 (1.5.7+dfsg-1) ... 127s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 85225 files and directories currently installed.) 127s Preparing to unpack .../000-gcc-14-base_14.2.0-22ubuntu1_arm64.deb ... 127s Unpacking gcc-14-base:arm64 (14.2.0-22ubuntu1) over (14.2.0-19ubuntu2) ... 127s Preparing to unpack .../001-libtirpc-common_1.3.6+ds-1_all.deb ... 127s Unpacking libtirpc-common (1.3.6+ds-1) over (1.3.4+ds-1.3) ... 127s Preparing to unpack .../002-libtirpc3t64_1.3.6+ds-1_arm64.deb ... 127s Unpacking libtirpc3t64:arm64 (1.3.6+ds-1) over (1.3.4+ds-1.3) ... 127s Selecting previously unselected package libisl23:arm64. 127s Preparing to unpack .../003-libisl23_0.27-1_arm64.deb ... 127s Unpacking libisl23:arm64 (0.27-1) ... 127s Selecting previously unselected package libmpc3:arm64. 127s Preparing to unpack .../004-libmpc3_1.3.1-1build2_arm64.deb ... 127s Unpacking libmpc3:arm64 (1.3.1-1build2) ... 127s Selecting previously unselected package cpp-14-aarch64-linux-gnu. 127s Preparing to unpack .../005-cpp-14-aarch64-linux-gnu_14.2.0-22ubuntu1_arm64.deb ... 127s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-22ubuntu1) ... 127s Selecting previously unselected package cpp-14. 127s Preparing to unpack .../006-cpp-14_14.2.0-22ubuntu1_arm64.deb ... 127s Unpacking cpp-14 (14.2.0-22ubuntu1) ... 127s Selecting previously unselected package cpp-aarch64-linux-gnu. 127s Preparing to unpack .../007-cpp-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 127s Unpacking cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 127s Selecting previously unselected package cpp. 127s Preparing to unpack .../008-cpp_4%3a14.2.0-1ubuntu1_arm64.deb ... 127s Unpacking cpp (4:14.2.0-1ubuntu1) ... 127s Selecting previously unselected package libcc1-0:arm64. 127s Preparing to unpack .../009-libcc1-0_15.1.0-1ubuntu1_arm64.deb ... 127s Unpacking libcc1-0:arm64 (15.1.0-1ubuntu1) ... 127s Selecting previously unselected package libgomp1:arm64. 127s Preparing to unpack .../010-libgomp1_15.1.0-1ubuntu1_arm64.deb ... 127s Unpacking libgomp1:arm64 (15.1.0-1ubuntu1) ... 127s Selecting previously unselected package libitm1:arm64. 127s Preparing to unpack .../011-libitm1_15.1.0-1ubuntu1_arm64.deb ... 127s Unpacking libitm1:arm64 (15.1.0-1ubuntu1) ... 127s Selecting previously unselected package libasan8:arm64. 127s Preparing to unpack .../012-libasan8_15.1.0-1ubuntu1_arm64.deb ... 127s Unpacking libasan8:arm64 (15.1.0-1ubuntu1) ... 127s Selecting previously unselected package liblsan0:arm64. 127s Preparing to unpack .../013-liblsan0_15.1.0-1ubuntu1_arm64.deb ... 127s Unpacking liblsan0:arm64 (15.1.0-1ubuntu1) ... 127s Selecting previously unselected package libtsan2:arm64. 127s Preparing to unpack .../014-libtsan2_15.1.0-1ubuntu1_arm64.deb ... 127s Unpacking libtsan2:arm64 (15.1.0-1ubuntu1) ... 128s Selecting previously unselected package libubsan1:arm64. 128s Preparing to unpack .../015-libubsan1_15.1.0-1ubuntu1_arm64.deb ... 128s Unpacking libubsan1:arm64 (15.1.0-1ubuntu1) ... 128s Selecting previously unselected package libhwasan0:arm64. 128s Preparing to unpack .../016-libhwasan0_15.1.0-1ubuntu1_arm64.deb ... 128s Unpacking libhwasan0:arm64 (15.1.0-1ubuntu1) ... 128s Selecting previously unselected package libgcc-14-dev:arm64. 128s Preparing to unpack .../017-libgcc-14-dev_14.2.0-22ubuntu1_arm64.deb ... 128s Unpacking libgcc-14-dev:arm64 (14.2.0-22ubuntu1) ... 128s Selecting previously unselected package gcc-14-aarch64-linux-gnu. 128s Preparing to unpack .../018-gcc-14-aarch64-linux-gnu_14.2.0-22ubuntu1_arm64.deb ... 128s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-22ubuntu1) ... 128s Selecting previously unselected package gcc-14. 128s Preparing to unpack .../019-gcc-14_14.2.0-22ubuntu1_arm64.deb ... 128s Unpacking gcc-14 (14.2.0-22ubuntu1) ... 128s Selecting previously unselected package gcc-aarch64-linux-gnu. 128s Preparing to unpack .../020-gcc-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 128s Unpacking gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 128s Selecting previously unselected package gcc. 128s Preparing to unpack .../021-gcc_4%3a14.2.0-1ubuntu1_arm64.deb ... 128s Unpacking gcc (4:14.2.0-1ubuntu1) ... 128s Selecting previously unselected package libstdc++-14-dev:arm64. 128s Preparing to unpack .../022-libstdc++-14-dev_14.2.0-22ubuntu1_arm64.deb ... 128s Unpacking libstdc++-14-dev:arm64 (14.2.0-22ubuntu1) ... 128s Selecting previously unselected package g++-14-aarch64-linux-gnu. 128s Preparing to unpack .../023-g++-14-aarch64-linux-gnu_14.2.0-22ubuntu1_arm64.deb ... 128s Unpacking g++-14-aarch64-linux-gnu (14.2.0-22ubuntu1) ... 129s Selecting previously unselected package g++-14. 129s Preparing to unpack .../024-g++-14_14.2.0-22ubuntu1_arm64.deb ... 129s Unpacking g++-14 (14.2.0-22ubuntu1) ... 129s Selecting previously unselected package g++-aarch64-linux-gnu. 129s Preparing to unpack .../025-g++-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 129s Unpacking g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 129s Selecting previously unselected package g++. 129s Preparing to unpack .../026-g++_4%3a14.2.0-1ubuntu1_arm64.deb ... 129s Unpacking g++ (4:14.2.0-1ubuntu1) ... 129s Selecting previously unselected package build-essential. 129s Preparing to unpack .../027-build-essential_12.12ubuntu1_arm64.deb ... 129s Unpacking build-essential (12.12ubuntu1) ... 129s Selecting previously unselected package dctrl-tools. 129s Preparing to unpack .../028-dctrl-tools_2.24-3build3_arm64.deb ... 129s Unpacking dctrl-tools (2.24-3build3) ... 129s Selecting previously unselected package fonts-dejavu-mono. 129s Preparing to unpack .../029-fonts-dejavu-mono_2.37-8_all.deb ... 129s Unpacking fonts-dejavu-mono (2.37-8) ... 129s Selecting previously unselected package fonts-dejavu-core. 129s Preparing to unpack .../030-fonts-dejavu-core_2.37-8_all.deb ... 129s Unpacking fonts-dejavu-core (2.37-8) ... 129s Selecting previously unselected package fontconfig-config. 129s Preparing to unpack .../031-fontconfig-config_2.15.0-2.2ubuntu1_arm64.deb ... 129s Unpacking fontconfig-config (2.15.0-2.2ubuntu1) ... 129s Selecting previously unselected package libfontconfig1:arm64. 129s Preparing to unpack .../032-libfontconfig1_2.15.0-2.2ubuntu1_arm64.deb ... 129s Unpacking libfontconfig1:arm64 (2.15.0-2.2ubuntu1) ... 129s Selecting previously unselected package fontconfig. 129s Preparing to unpack .../033-fontconfig_2.15.0-2.2ubuntu1_arm64.deb ... 129s Unpacking fontconfig (2.15.0-2.2ubuntu1) ... 129s Selecting previously unselected package fonts-font-awesome. 129s Preparing to unpack .../034-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 129s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 129s Selecting previously unselected package fonts-glyphicons-halflings. 129s Preparing to unpack .../035-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-4_all.deb ... 129s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-4) ... 129s Selecting previously unselected package fonts-lmodern. 129s Preparing to unpack .../036-fonts-lmodern_2.005-1_all.deb ... 129s Unpacking fonts-lmodern (2.005-1) ... 129s Selecting previously unselected package fonts-mathjax. 129s Preparing to unpack .../037-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 129s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 130s Selecting previously unselected package libgfortran5:arm64. 130s Preparing to unpack .../038-libgfortran5_15.1.0-1ubuntu1_arm64.deb ... 130s Unpacking libgfortran5:arm64 (15.1.0-1ubuntu1) ... 130s Selecting previously unselected package libgfortran-14-dev:arm64. 130s Preparing to unpack .../039-libgfortran-14-dev_14.2.0-22ubuntu1_arm64.deb ... 130s Unpacking libgfortran-14-dev:arm64 (14.2.0-22ubuntu1) ... 130s Selecting previously unselected package gfortran-14-aarch64-linux-gnu. 130s Preparing to unpack .../040-gfortran-14-aarch64-linux-gnu_14.2.0-22ubuntu1_arm64.deb ... 130s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-22ubuntu1) ... 130s Selecting previously unselected package gfortran-14. 130s Preparing to unpack .../041-gfortran-14_14.2.0-22ubuntu1_arm64.deb ... 130s Unpacking gfortran-14 (14.2.0-22ubuntu1) ... 130s Selecting previously unselected package gfortran-aarch64-linux-gnu. 130s Preparing to unpack .../042-gfortran-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 130s Unpacking gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 130s Selecting previously unselected package gfortran. 130s Preparing to unpack .../043-gfortran_4%3a14.2.0-1ubuntu1_arm64.deb ... 130s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 130s Selecting previously unselected package icu-devtools. 130s Preparing to unpack .../044-icu-devtools_76.1-1ubuntu2_arm64.deb ... 130s Unpacking icu-devtools (76.1-1ubuntu2) ... 130s Selecting previously unselected package javascript-common. 130s Preparing to unpack .../045-javascript-common_12_all.deb ... 130s Unpacking javascript-common (12) ... 130s Selecting previously unselected package libio-string-perl. 130s Preparing to unpack .../046-libio-string-perl_1.08-4_all.deb ... 130s Unpacking libio-string-perl (1.08-4) ... 130s Selecting previously unselected package liblatex-tounicode-perl. 130s Preparing to unpack .../047-liblatex-tounicode-perl_0.55-1_all.deb ... 130s Unpacking liblatex-tounicode-perl (0.55-1) ... 130s Selecting previously unselected package libbibtex-parser-perl. 130s Preparing to unpack .../048-libbibtex-parser-perl_1.05+dfsg-1_all.deb ... 130s Unpacking libbibtex-parser-perl (1.05+dfsg-1) ... 130s Selecting previously unselected package libblas3:arm64. 130s Preparing to unpack .../049-libblas3_3.12.1-2_arm64.deb ... 130s Unpacking libblas3:arm64 (3.12.1-2) ... 130s Selecting previously unselected package libblas-dev:arm64. 130s Preparing to unpack .../050-libblas-dev_3.12.1-2_arm64.deb ... 130s Unpacking libblas-dev:arm64 (3.12.1-2) ... 130s Selecting previously unselected package libbz2-dev:arm64. 130s Preparing to unpack .../051-libbz2-dev_1.0.8-6_arm64.deb ... 130s Unpacking libbz2-dev:arm64 (1.0.8-6) ... 130s Selecting previously unselected package libpixman-1-0:arm64. 130s Preparing to unpack .../052-libpixman-1-0_0.44.0-3_arm64.deb ... 130s Unpacking libpixman-1-0:arm64 (0.44.0-3) ... 130s Selecting previously unselected package libxcb-render0:arm64. 130s Preparing to unpack .../053-libxcb-render0_1.17.0-2_arm64.deb ... 130s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 130s Selecting previously unselected package libxcb-shm0:arm64. 130s Preparing to unpack .../054-libxcb-shm0_1.17.0-2_arm64.deb ... 130s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 130s Selecting previously unselected package libxrender1:arm64. 130s Preparing to unpack .../055-libxrender1_1%3a0.9.12-1_arm64.deb ... 130s Unpacking libxrender1:arm64 (1:0.9.12-1) ... 130s Selecting previously unselected package libcairo2:arm64. 130s Preparing to unpack .../056-libcairo2_1.18.4-1_arm64.deb ... 130s Unpacking libcairo2:arm64 (1.18.4-1) ... 130s Selecting previously unselected package libdatrie1:arm64. 130s Preparing to unpack .../057-libdatrie1_0.2.13-3build1_arm64.deb ... 130s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 130s Selecting previously unselected package libdeflate0:arm64. 130s Preparing to unpack .../058-libdeflate0_1.23-2_arm64.deb ... 130s Unpacking libdeflate0:arm64 (1.23-2) ... 130s Selecting previously unselected package libdeflate-dev:arm64. 130s Preparing to unpack .../059-libdeflate-dev_1.23-2_arm64.deb ... 130s Unpacking libdeflate-dev:arm64 (1.23-2) ... 130s Selecting previously unselected package libgraphite2-3:arm64. 130s Preparing to unpack .../060-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 130s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 130s Selecting previously unselected package libharfbuzz0b:arm64. 130s Preparing to unpack .../061-libharfbuzz0b_10.2.0-1_arm64.deb ... 130s Unpacking libharfbuzz0b:arm64 (10.2.0-1) ... 131s Selecting previously unselected package x11-common. 131s Preparing to unpack .../062-x11-common_1%3a7.7+23ubuntu4_all.deb ... 131s Unpacking x11-common (1:7.7+23ubuntu4) ... 131s Selecting previously unselected package libice6:arm64. 131s Preparing to unpack .../063-libice6_2%3a1.1.1-1_arm64.deb ... 131s Unpacking libice6:arm64 (2:1.1.1-1) ... 131s Selecting previously unselected package libicu-dev:arm64. 131s Preparing to unpack .../064-libicu-dev_76.1-1ubuntu2_arm64.deb ... 131s Unpacking libicu-dev:arm64 (76.1-1ubuntu2) ... 131s Selecting previously unselected package libjpeg-turbo8:arm64. 131s Preparing to unpack .../065-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ... 131s Unpacking libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 131s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 131s Preparing to unpack .../066-libjpeg-turbo8-dev_2.1.5-3ubuntu2_arm64.deb ... 131s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ... 131s Selecting previously unselected package libjpeg8:arm64. 131s Preparing to unpack .../067-libjpeg8_8c-2ubuntu11_arm64.deb ... 131s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 131s Selecting previously unselected package libjpeg8-dev:arm64. 131s Preparing to unpack .../068-libjpeg8-dev_8c-2ubuntu11_arm64.deb ... 131s Unpacking libjpeg8-dev:arm64 (8c-2ubuntu11) ... 131s Selecting previously unselected package libjpeg-dev:arm64. 131s Preparing to unpack .../069-libjpeg-dev_8c-2ubuntu11_arm64.deb ... 131s Unpacking libjpeg-dev:arm64 (8c-2ubuntu11) ... 131s Selecting previously unselected package libjs-bootstrap. 131s Preparing to unpack .../070-libjs-bootstrap_3.4.1+dfsg-4_all.deb ... 131s Unpacking libjs-bootstrap (3.4.1+dfsg-4) ... 131s Selecting previously unselected package libjs-popper.js. 131s Preparing to unpack .../071-libjs-popper.js_1.16.1+ds-6_all.deb ... 131s Unpacking libjs-popper.js (1.16.1+ds-6) ... 131s Selecting previously unselected package libjs-bootstrap4. 131s Preparing to unpack .../072-libjs-bootstrap4_4.6.2+dfsg-1_all.deb ... 131s Unpacking libjs-bootstrap4 (4.6.2+dfsg-1) ... 131s Selecting previously unselected package libjs-d3. 131s Preparing to unpack .../073-libjs-d3_3.5.17-4_all.deb ... 131s Unpacking libjs-d3 (3.5.17-4) ... 131s Selecting previously unselected package libjs-es5-shim. 131s Preparing to unpack .../074-libjs-es5-shim_4.6.7-2_all.deb ... 131s Unpacking libjs-es5-shim (4.6.7-2) ... 131s Selecting previously unselected package libjs-highlight.js. 131s Preparing to unpack .../075-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 131s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 131s Selecting previously unselected package libjs-jquery. 131s Preparing to unpack .../076-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 131s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 131s Selecting previously unselected package libjs-jquery-datatables. 131s Preparing to unpack .../077-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 131s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 131s Selecting previously unselected package libjs-sifter.js. 131s Preparing to unpack .../078-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 131s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 131s Selecting previously unselected package libjs-microplugin.js. 131s Preparing to unpack .../079-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 131s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 131s Selecting previously unselected package libjs-jquery-selectize.js. 131s Preparing to unpack .../080-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 131s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 131s Selecting previously unselected package libjs-jquery-ui. 132s Preparing to unpack .../081-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 132s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 132s Selecting previously unselected package libjs-json. 132s Preparing to unpack .../082-libjs-json_0~20221030+~1.0.8-1_all.deb ... 132s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 132s Selecting previously unselected package libjs-lunr. 132s Preparing to unpack .../083-libjs-lunr_2.3.9~dfsg-2_all.deb ... 132s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 132s Selecting previously unselected package libjs-prettify. 132s Preparing to unpack .../084-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 132s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 132s Selecting previously unselected package libkpathsea6:arm64. 132s Preparing to unpack .../085-libkpathsea6_2024.20240313.70630+ds-6_arm64.deb ... 132s Unpacking libkpathsea6:arm64 (2024.20240313.70630+ds-6) ... 132s Selecting previously unselected package liblapack3:arm64. 132s Preparing to unpack .../086-liblapack3_3.12.1-2_arm64.deb ... 132s Unpacking liblapack3:arm64 (3.12.1-2) ... 132s Selecting previously unselected package liblapack-dev:arm64. 132s Preparing to unpack .../087-liblapack-dev_3.12.1-2_arm64.deb ... 132s Unpacking liblapack-dev:arm64 (3.12.1-2) ... 132s Selecting previously unselected package liblerc4:arm64. 132s Preparing to unpack .../088-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ... 132s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 132s Selecting previously unselected package liblua5.4-0:arm64. 132s Preparing to unpack .../089-liblua5.4-0_5.4.7-1_arm64.deb ... 132s Unpacking liblua5.4-0:arm64 (5.4.7-1) ... 132s Selecting previously unselected package libmpfi0:arm64. 132s Preparing to unpack .../090-libmpfi0_1.5.4+ds-4_arm64.deb ... 132s Unpacking libmpfi0:arm64 (1.5.4+ds-4) ... 132s Selecting previously unselected package libncurses-dev:arm64. 132s Preparing to unpack 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.../096-libpangocairo-1.0-0_1.56.3-1_arm64.deb ... 132s Unpacking libpangocairo-1.0-0:arm64 (1.56.3-1) ... 132s Selecting previously unselected package libpaper2:arm64. 132s Preparing to unpack .../097-libpaper2_2.2.5-0.3_arm64.deb ... 132s Unpacking libpaper2:arm64 (2.2.5-0.3) ... 132s Selecting previously unselected package libpaper-utils. 132s Preparing to unpack .../098-libpaper-utils_2.2.5-0.3_arm64.deb ... 132s Unpacking libpaper-utils (2.2.5-0.3) ... 132s Selecting previously unselected package libpcre2-16-0:arm64. 132s Preparing to unpack .../099-libpcre2-16-0_10.45-1_arm64.deb ... 132s Unpacking libpcre2-16-0:arm64 (10.45-1) ... 132s Selecting previously unselected package libpcre2-32-0:arm64. 132s Preparing to unpack .../100-libpcre2-32-0_10.45-1_arm64.deb ... 132s Unpacking libpcre2-32-0:arm64 (10.45-1) ... 132s Selecting previously unselected package libpcre2-posix3:arm64. 132s Preparing to unpack .../101-libpcre2-posix3_10.45-1_arm64.deb ... 132s Unpacking libpcre2-posix3:arm64 (10.45-1) ... 132s Selecting previously unselected package libpcre2-dev:arm64. 132s Preparing to unpack .../102-libpcre2-dev_10.45-1_arm64.deb ... 132s Unpacking libpcre2-dev:arm64 (10.45-1) ... 132s Selecting previously unselected package libpkgconf3:arm64. 132s Preparing to unpack .../103-libpkgconf3_1.8.1-4_arm64.deb ... 132s Unpacking libpkgconf3:arm64 (1.8.1-4) ... 132s Selecting previously unselected package zlib1g-dev:arm64. 132s Preparing to unpack .../104-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ... 132s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 132s Selecting previously unselected package libpng-dev:arm64. 132s Preparing to unpack .../105-libpng-dev_1.6.47-1.1_arm64.deb ... 132s Unpacking libpng-dev:arm64 (1.6.47-1.1) ... 132s Selecting previously unselected package libpotrace0:arm64. 133s Preparing to unpack .../106-libpotrace0_1.16-2build1_arm64.deb ... 133s Unpacking libpotrace0:arm64 (1.16-2build1) ... 133s Selecting previously unselected package libptexenc1:arm64. 133s Preparing to unpack .../107-libptexenc1_2024.20240313.70630+ds-6_arm64.deb ... 133s Unpacking libptexenc1:arm64 (2024.20240313.70630+ds-6) ... 133s Selecting previously unselected package libreadline-dev:arm64. 133s Preparing to unpack .../108-libreadline-dev_8.2-6_arm64.deb ... 133s Unpacking libreadline-dev:arm64 (8.2-6) ... 133s Selecting previously unselected package libsharpyuv0:arm64. 133s Preparing to unpack .../109-libsharpyuv0_1.5.0-0.1_arm64.deb ... 133s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ... 133s Selecting previously unselected package libsm6:arm64. 133s Preparing to unpack .../110-libsm6_2%3a1.2.6-1_arm64.deb ... 133s Unpacking libsm6:arm64 (2:1.2.6-1) ... 133s Selecting previously unselected package libsynctex2:arm64. 133s Preparing to unpack .../111-libsynctex2_2024.20240313.70630+ds-6_arm64.deb ... 133s Unpacking libsynctex2:arm64 (2024.20240313.70630+ds-6) ... 133s Selecting previously unselected package libtcl8.6:arm64. 133s Preparing to unpack .../112-libtcl8.6_8.6.16+dfsg-1_arm64.deb ... 133s Unpacking libtcl8.6:arm64 (8.6.16+dfsg-1) ... 133s Selecting previously unselected package libteckit0:arm64. 133s Preparing to unpack .../113-libteckit0_2.5.12+ds1-1_arm64.deb ... 133s Unpacking libteckit0:arm64 (2.5.12+ds1-1) ... 133s Selecting previously unselected package libtexlua53-5:arm64. 133s Preparing to unpack .../114-libtexlua53-5_2024.20240313.70630+ds-6_arm64.deb ... 133s Unpacking libtexlua53-5:arm64 (2024.20240313.70630+ds-6) ... 133s Selecting previously unselected package libjbig0:arm64. 133s Preparing to unpack .../115-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 133s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 133s Selecting previously unselected package libwebp7:arm64. 133s Preparing to unpack .../116-libwebp7_1.5.0-0.1_arm64.deb ... 133s Unpacking libwebp7:arm64 (1.5.0-0.1) ... 133s Selecting previously unselected package libtiff6:arm64. 133s Preparing to unpack .../117-libtiff6_4.7.0-3ubuntu1_arm64.deb ... 133s Unpacking libtiff6:arm64 (4.7.0-3ubuntu1) ... 133s Selecting previously unselected package libxft2:arm64. 133s Preparing to unpack .../118-libxft2_2.3.6-1build1_arm64.deb ... 133s Unpacking libxft2:arm64 (2.3.6-1build1) ... 133s Selecting previously unselected package libxss1:arm64. 133s Preparing to unpack .../119-libxss1_1%3a1.2.3-1build3_arm64.deb ... 133s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 133s Selecting previously unselected package libtk8.6:arm64. 133s Preparing to unpack .../120-libtk8.6_8.6.16-1_arm64.deb ... 133s Unpacking libtk8.6:arm64 (8.6.16-1) ... 133s Selecting previously unselected package libxt6t64:arm64. 133s Preparing to unpack .../121-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ... 133s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ... 133s Selecting previously unselected package libxmu6:arm64. 133s Preparing to unpack .../122-libxmu6_2%3a1.1.3-3build2_arm64.deb ... 133s Unpacking libxmu6:arm64 (2:1.1.3-3build2) ... 133s Selecting previously unselected package libxpm4:arm64. 133s Preparing to unpack .../123-libxpm4_1%3a3.5.17-1build2_arm64.deb ... 133s Unpacking libxpm4:arm64 (1:3.5.17-1build2) ... 133s Selecting previously unselected package libxaw7:arm64. 133s Preparing to unpack .../124-libxaw7_2%3a1.0.16-1_arm64.deb ... 133s Unpacking libxaw7:arm64 (2:1.0.16-1) ... 133s Selecting previously unselected package libxi6:arm64. 133s Preparing to unpack .../125-libxi6_2%3a1.8.2-1_arm64.deb ... 133s Unpacking libxi6:arm64 (2:1.8.2-1) ... 133s Selecting previously unselected package libzstd-dev:arm64. 133s Preparing to unpack .../126-libzstd-dev_1.5.7+dfsg-1_arm64.deb ... 133s Unpacking libzstd-dev:arm64 (1.5.7+dfsg-1) ... 133s Selecting previously unselected package libzzip-0-13t64:arm64. 133s Preparing to unpack .../127-libzzip-0-13t64_0.13.78+dfsg.1-0.1_arm64.deb ... 133s Unpacking libzzip-0-13t64:arm64 (0.13.78+dfsg.1-0.1) ... 133s Selecting previously unselected package zip. 133s Preparing to unpack .../128-zip_3.0-14ubuntu2_arm64.deb ... 133s Unpacking zip (3.0-14ubuntu2) ... 133s Selecting previously unselected package unzip. 133s Preparing to unpack .../129-unzip_6.0-28ubuntu6_arm64.deb ... 133s Unpacking unzip (6.0-28ubuntu6) ... 133s Selecting previously unselected package xdg-utils. 133s Preparing to unpack .../130-xdg-utils_1.2.1-2ubuntu1_all.deb ... 133s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 133s Selecting previously unselected package r-base-core. 133s Preparing to unpack .../131-r-base-core_4.5.0-3_arm64.deb ... 133s Unpacking r-base-core (4.5.0-3) ... 134s Selecting previously unselected package r-cran-littler. 134s Preparing to unpack .../132-r-cran-littler_0.3.21-1_arm64.deb ... 134s Unpacking r-cran-littler (0.3.21-1) ... 134s Selecting previously unselected package littler. 134s Preparing to unpack .../133-littler_0.3.21-1_all.deb ... 134s Unpacking littler (0.3.21-1) ... 134s Selecting previously unselected package node-bootstrap-sass. 134s Preparing to unpack .../134-node-bootstrap-sass_3.4.3-2_all.deb ... 134s Unpacking node-bootstrap-sass (3.4.3-2) ... 134s Selecting previously unselected package node-html5shiv. 134s Preparing to unpack .../135-node-html5shiv_3.7.3+dfsg-5_all.deb ... 134s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 134s Selecting previously unselected package node-normalize.css. 134s Preparing to unpack .../136-node-normalize.css_8.0.1-5_all.deb ... 134s Unpacking node-normalize.css (8.0.1-5) ... 134s Selecting previously unselected package pandoc-data. 134s Preparing to unpack .../137-pandoc-data_3.1.11.1-3build1_all.deb ... 134s Unpacking pandoc-data (3.1.11.1-3build1) ... 134s Selecting previously unselected package pandoc. 134s Preparing to unpack .../138-pandoc_3.1.11.1+ds-2_arm64.deb ... 134s Unpacking pandoc (3.1.11.1+ds-2) ... 135s Selecting previously unselected package liblzma-dev:arm64. 135s Preparing to unpack .../139-liblzma-dev_5.6.4-1ubuntu1_arm64.deb ... 135s Unpacking liblzma-dev:arm64 (5.6.4-1ubuntu1) ... 135s Selecting previously unselected package pkgconf-bin. 135s Preparing to unpack .../140-pkgconf-bin_1.8.1-4_arm64.deb ... 135s Unpacking pkgconf-bin (1.8.1-4) ... 135s Selecting previously unselected package pkgconf:arm64. 135s Preparing to unpack .../141-pkgconf_1.8.1-4_arm64.deb ... 135s Unpacking pkgconf:arm64 (1.8.1-4) ... 135s Selecting previously unselected package libtirpc-dev:arm64. 135s Preparing to unpack .../142-libtirpc-dev_1.3.6+ds-1_arm64.deb ... 135s Unpacking libtirpc-dev:arm64 (1.3.6+ds-1) ... 135s Selecting previously unselected package r-base-dev. 135s Preparing to unpack .../143-r-base-dev_4.5.0-3_all.deb ... 135s Unpacking r-base-dev (4.5.0-3) ... 135s Selecting previously unselected package pkg-r-autopkgtest. 135s Preparing to unpack .../144-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 135s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 135s Selecting previously unselected package r-bioc-biocgenerics. 135s Preparing to unpack .../145-r-bioc-biocgenerics_0.52.0-2_all.deb ... 135s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 135s Selecting previously unselected package r-cran-base64enc. 135s Preparing to unpack .../146-r-cran-base64enc_0.1-3-3_arm64.deb ... 135s Unpacking r-cran-base64enc (0.1-3-3) ... 135s Selecting previously unselected package r-cran-digest. 135s Preparing to unpack .../147-r-cran-digest_0.6.37-1_arm64.deb ... 135s Unpacking r-cran-digest (0.6.37-1) ... 135s Selecting previously unselected package r-cran-fastmap. 135s Preparing to unpack .../148-r-cran-fastmap_1.2.0-1_arm64.deb ... 135s Unpacking r-cran-fastmap (1.2.0-1) ... 135s Selecting previously unselected package r-cran-rlang. 135s Preparing to unpack .../149-r-cran-rlang_1.1.5-3_arm64.deb ... 135s Unpacking r-cran-rlang (1.1.5-3) ... 135s Selecting previously unselected package r-cran-htmltools. 135s Preparing to unpack .../150-r-cran-htmltools_0.5.8.1-1_arm64.deb ... 135s Unpacking r-cran-htmltools (0.5.8.1-1) ... 135s Selecting previously unselected package r-cran-evaluate. 135s Preparing to unpack .../151-r-cran-evaluate_1.0.3-1_all.deb ... 135s Unpacking r-cran-evaluate (1.0.3-1) ... 135s Selecting previously unselected package r-cran-xfun. 135s Preparing to unpack .../152-r-cran-xfun_0.51+dfsg-1_arm64.deb ... 135s Unpacking r-cran-xfun (0.51+dfsg-1) ... 135s Selecting previously unselected package r-cran-highr. 135s Preparing to unpack .../153-r-cran-highr_0.11+dfsg-1_all.deb ... 135s Unpacking r-cran-highr (0.11+dfsg-1) ... 135s Selecting previously unselected package r-cran-yaml. 135s Preparing to unpack .../154-r-cran-yaml_2.3.10-1_arm64.deb ... 135s Unpacking r-cran-yaml (2.3.10-1) ... 136s Selecting previously unselected package libjs-mathjax. 136s Preparing to unpack .../155-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 136s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 136s Selecting previously unselected package r-cran-knitr. 136s Preparing to unpack .../156-r-cran-knitr_1.50+dfsg-1_all.deb ... 136s Unpacking r-cran-knitr (1.50+dfsg-1) ... 136s Selecting previously unselected package r-cran-cachem. 136s Preparing to unpack .../157-r-cran-cachem_1.1.0-1_arm64.deb ... 136s Unpacking r-cran-cachem (1.1.0-1) ... 136s Selecting previously unselected package r-cran-jquerylib. 136s Preparing to unpack .../158-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 136s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 136s Selecting previously unselected package r-cran-jsonlite. 136s Preparing to unpack .../159-r-cran-jsonlite_1.9.1+dfsg-1_arm64.deb ... 136s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 136s Selecting previously unselected package r-cran-cli. 136s Preparing to unpack .../160-r-cran-cli_3.6.4-1_arm64.deb ... 136s Unpacking r-cran-cli (3.6.4-1) ... 136s Selecting previously unselected package r-cran-glue. 136s Preparing to unpack .../161-r-cran-glue_1.8.0-1_arm64.deb ... 136s Unpacking r-cran-glue (1.8.0-1) ... 136s Selecting previously unselected package r-cran-lifecycle. 136s Preparing to unpack .../162-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 136s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 136s Selecting previously unselected package r-cran-memoise. 136s Preparing to unpack .../163-r-cran-memoise_2.0.1-1_all.deb ... 136s Unpacking r-cran-memoise (2.0.1-1) ... 136s Selecting previously unselected package r-cran-mime. 136s Preparing to unpack .../164-r-cran-mime_0.12-2_arm64.deb ... 136s Unpacking r-cran-mime (0.12-2) ... 136s Selecting previously unselected package r-cran-fs. 136s Preparing to unpack .../165-r-cran-fs_1.6.5+dfsg-1_arm64.deb ... 136s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 136s Selecting previously unselected package r-cran-r6. 136s Preparing to unpack .../166-r-cran-r6_2.6.1-1_all.deb ... 136s Unpacking r-cran-r6 (2.6.1-1) ... 136s Selecting previously unselected package r-cran-rappdirs. 136s Preparing to unpack .../167-r-cran-rappdirs_0.3.3-1_arm64.deb ... 136s Unpacking r-cran-rappdirs (0.3.3-1) ... 137s Selecting previously unselected package r-cran-sass. 137s Preparing to unpack .../168-r-cran-sass_0.4.9+dfsg-1_arm64.deb ... 137s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 137s Selecting previously unselected package r-cran-bslib. 137s Preparing to unpack .../169-r-cran-bslib_0.9.0+dfsg-3_all.deb ... 137s Unpacking r-cran-bslib (0.9.0+dfsg-3) ... 137s Selecting previously unselected package r-cran-fontawesome. 137s Preparing to unpack .../170-r-cran-fontawesome_0.5.3-1_all.deb ... 137s Unpacking r-cran-fontawesome (0.5.3-1) ... 137s Selecting previously unselected package r-cran-tinytex. 137s Preparing to unpack .../171-r-cran-tinytex_0.56-1_all.deb ... 137s Unpacking r-cran-tinytex (0.56-1) ... 137s Selecting previously unselected package libjs-modernizr. 137s Preparing to unpack .../172-libjs-modernizr_3.13.0-0.1_all.deb ... 137s Unpacking libjs-modernizr (3.13.0-0.1) ... 137s Selecting previously unselected package r-cran-pkgkitten. 137s Preparing to unpack .../173-r-cran-pkgkitten_0.2.4-1_all.deb ... 137s Unpacking r-cran-pkgkitten (0.2.4-1) ... 137s Selecting previously unselected package r-cran-rcpp. 137s Preparing to unpack .../174-r-cran-rcpp_1.0.14-1_arm64.deb ... 137s Unpacking r-cran-rcpp (1.0.14-1) ... 137s Selecting previously unselected package r-cran-later. 137s Preparing to unpack .../175-r-cran-later_1.4.1+dfsg-1_arm64.deb ... 137s Unpacking r-cran-later (1.4.1+dfsg-1) ... 137s Selecting previously unselected package r-cran-magrittr. 137s Preparing to unpack .../176-r-cran-magrittr_2.0.3-1_arm64.deb ... 137s Unpacking r-cran-magrittr (2.0.3-1) ... 137s Selecting previously unselected package r-cran-promises. 137s Preparing to unpack .../177-r-cran-promises_1.3.2+dfsg-1_arm64.deb ... 137s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 137s Selecting previously unselected package r-cran-httpuv. 137s Preparing to unpack .../178-r-cran-httpuv_1.6.15+dfsg-1_arm64.deb ... 137s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 137s Selecting previously unselected package r-cran-xtable. 137s Preparing to unpack .../179-r-cran-xtable_1%3a1.8-4-2_all.deb ... 137s Unpacking r-cran-xtable (1:1.8-4-2) ... 137s Selecting previously unselected package r-cran-sourcetools. 137s Preparing to unpack .../180-r-cran-sourcetools_0.1.7-1-1_arm64.deb ... 137s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 137s Selecting previously unselected package r-cran-crayon. 137s Preparing to unpack .../181-r-cran-crayon_1.5.3-1_all.deb ... 137s Unpacking r-cran-crayon (1.5.3-1) ... 137s Selecting previously unselected package r-cran-withr. 137s Preparing to unpack .../182-r-cran-withr_3.0.2+dfsg-1_all.deb ... 137s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 137s Selecting previously unselected package r-cran-commonmark. 137s Preparing to unpack .../183-r-cran-commonmark_1.9.5-1_arm64.deb ... 137s Unpacking r-cran-commonmark (1.9.5-1) ... 137s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 137s Preparing to unpack .../184-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 137s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 137s Selecting previously unselected package r-cran-shiny. 137s Preparing to unpack .../185-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 137s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 138s Selecting previously unselected package r-cran-rmarkdown. 138s Preparing to unpack .../186-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 138s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 138s Selecting previously unselected package r-cran-bookdown. 138s Preparing to unpack .../187-r-cran-bookdown_0.42+dfsg-1_all.deb ... 138s Unpacking r-cran-bookdown (0.42+dfsg-1) ... 138s Selecting previously unselected package r-cran-biocmanager. 138s Preparing to unpack .../188-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 138s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 138s Selecting previously unselected package tex-common. 138s Preparing to unpack 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texlive-bibtex-extra (2024.20250309-2) ... 142s Selecting previously unselected package r-bioc-biocversion. 142s Preparing to unpack .../195-r-bioc-biocversion_3.20.0-2_all.deb ... 142s Unpacking r-bioc-biocversion (3.20.0-2) ... 142s Selecting previously unselected package r-bioc-biocstyle. 142s Preparing to unpack .../196-r-bioc-biocstyle_2.34.0+dfsg-1_all.deb ... 142s Unpacking r-bioc-biocstyle (2.34.0+dfsg-1) ... 142s Selecting previously unselected package r-bioc-s4vectors. 142s Preparing to unpack .../197-r-bioc-s4vectors_0.44.0+dfsg-2_arm64.deb ... 142s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 142s Selecting previously unselected package r-bioc-iranges. 142s Preparing to unpack .../198-r-bioc-iranges_2.40.1-3_arm64.deb ... 142s Unpacking r-bioc-iranges (2.40.1-3) ... 142s Selecting previously unselected package r-bioc-zlibbioc. 142s Preparing to unpack .../199-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 142s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 142s Selecting previously unselected package r-bioc-xvector. 142s Preparing to unpack .../200-r-bioc-xvector_0.46.0-2_arm64.deb ... 142s Unpacking r-bioc-xvector (0.46.0-2) ... 142s Selecting previously unselected package r-cran-curl. 142s Preparing to unpack .../201-r-cran-curl_6.2.1+dfsg-1ubuntu1_arm64.deb ... 142s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 142s Selecting previously unselected package r-cran-sys. 142s Preparing to unpack .../202-r-cran-sys_3.4.3-1_arm64.deb ... 142s Unpacking r-cran-sys (3.4.3-1) ... 142s Selecting previously unselected package r-cran-askpass. 142s Preparing to unpack .../203-r-cran-askpass_1.2.1-1_arm64.deb ... 142s Unpacking r-cran-askpass (1.2.1-1) ... 142s Selecting previously unselected package r-cran-openssl. 142s Preparing to unpack .../204-r-cran-openssl_2.3.2+dfsg-1_arm64.deb ... 142s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 142s Selecting previously unselected package r-cran-httr. 142s Preparing to unpack .../205-r-cran-httr_1.4.7+dfsg-1_all.deb 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144s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 144s Setting up libptexenc1:arm64 (2024.20240313.70630+ds-6) ... 144s Setting up pandoc (3.1.11.1+ds-2) ... 144s Setting up liblapack-dev:arm64 (3.12.1-2) ... 144s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode 144s Setting up cpp-14-aarch64-linux-gnu (14.2.0-22ubuntu1) ... 144s Setting up libtiff6:arm64 (4.7.0-3ubuntu1) ... 144s Setting up libfontconfig1:arm64 (2.15.0-2.2ubuntu1) ... 144s Setting up libgcc-14-dev:arm64 (14.2.0-22ubuntu1) ... 144s Setting up libjpeg8-dev:arm64 (8c-2ubuntu11) ... 144s Setting up libstdc++-14-dev:arm64 (14.2.0-22ubuntu1) ... 144s Setting up libsm6:arm64 (2:1.2.6-1) ... 144s Setting up libgfortran-14-dev:arm64 (14.2.0-22ubuntu1) ... 144s Setting up fontconfig (2.15.0-2.2ubuntu1) ... 146s Regenerating fonts cache... done. 146s Setting up libxft2:arm64 (2.3.6-1build1) ... 146s Setting up libtk8.6:arm64 (8.6.16-1) ... 146s Setting up libpango-1.0-0:arm64 (1.56.3-1) ... 146s Setting up libjpeg-dev:arm64 (8c-2ubuntu11) ... 146s Setting up libcairo2:arm64 (1.18.4-1) ... 146s Setting up cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 146s Setting up libxt6t64:arm64 (1:1.2.1-1.2build1) ... 146s Setting up cpp-14 (14.2.0-22ubuntu1) ... 146s Setting up cpp (4:14.2.0-1ubuntu1) ... 146s Setting up gcc-14-aarch64-linux-gnu (14.2.0-22ubuntu1) ... 146s Setting up libpangoft2-1.0-0:arm64 (1.56.3-1) ... 146s Setting up libpangocairo-1.0-0:arm64 (1.56.3-1) ... 146s Setting up gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 146s Setting up libxmu6:arm64 (2:1.1.3-3build2) ... 146s Setting up g++-14-aarch64-linux-gnu (14.2.0-22ubuntu1) ... 146s Setting up libxaw7:arm64 (2:1.0.16-1) ... 146s Setting up gcc-14 (14.2.0-22ubuntu1) ... 146s Setting up r-base-core (4.5.0-3) ... 146s Creating config file /etc/R/Renviron with new version 146s Setting up r-cran-crayon (1.5.3-1) ... 146s Setting up r-cran-sourcetools (0.1.7-1-1) ... 146s Setting up texlive-binaries (2024.20240313.70630+ds-6) ... 146s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 146s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 146s Setting up gfortran-14-aarch64-linux-gnu (14.2.0-22ubuntu1) ... 146s Setting up g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 146s Setting up gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 146s Setting up r-cran-commonmark (1.9.5-1) ... 146s Setting up g++-14 (14.2.0-22ubuntu1) ... 146s Setting up r-cran-r6 (2.6.1-1) ... 146s Setting up r-cran-pkgkitten (0.2.4-1) ... 146s Setting up gfortran-14 (14.2.0-22ubuntu1) ... 146s Setting up texlive-base (2024.20250309-1) ... 147s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 147s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 147s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 147s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 148s Setting up r-cran-magrittr (2.0.3-1) ... 148s Setting up r-cran-rappdirs (0.3.3-1) ... 148s Setting up r-bioc-genomeinfodbdata (1.2.13-2) ... 148s Setting up r-cran-littler (0.3.21-1) ... 148s Setting up r-cran-fs (1.6.5+dfsg-1) ... 148s Setting up r-cran-rcpp (1.0.14-1) ... 148s Setting up r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 148s Setting up r-bioc-biocgenerics (0.52.0-2) ... 148s Setting up r-cran-rlang (1.1.5-3) ... 148s Setting up littler (0.3.21-1) ... 148s Setting up r-cran-xfun (0.51+dfsg-1) ... 148s Setting up r-cran-sys (3.4.3-1) ... 148s Setting up r-cran-withr (3.0.2+dfsg-1) ... 148s Setting up r-cran-mime (0.12-2) ... 148s Setting up r-cran-base64enc (0.1-3-3) ... 148s Setting up r-cran-digest (0.6.37-1) ... 148s Setting up r-cran-yaml (2.3.10-1) ... 148s Setting up r-cran-evaluate (1.0.3-1) ... 148s Setting up r-cran-highr (0.11+dfsg-1) ... 148s Setting up r-cran-glue (1.8.0-1) ... 148s Setting up r-cran-xtable (1:1.8-4-2) ... 148s Setting up r-cran-cli (3.6.4-1) ... 148s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 148s Setting up r-bioc-biocversion (3.20.0-2) ... 148s Setting up r-cran-biocmanager (1.30.25+dfsg-1) ... 148s Setting up gcc (4:14.2.0-1ubuntu1) ... 148s Setting up r-bioc-zlibbioc (1.52.0+dfsg-2) ... 148s Setting up r-cran-askpass (1.2.1-1) ... 148s Setting up r-cran-fastmap (1.2.0-1) ... 148s Setting up r-cran-png (0.1-8-1build2) ... 148s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ... 148s Setting up texlive-latex-base (2024.20250309-1) ... 148s Setting up r-cran-markdown (1.13-1) ... 148s Setting up r-bioc-s4vectors (0.44.0+dfsg-2) ... 148s Setting up r-cran-runit (0.4.33-1) ... 148s Setting up r-cran-later (1.4.1+dfsg-1) ... 148s Setting up r-cran-htmltools (0.5.8.1-1) ... 148s Setting up r-cran-tinytex (0.56-1) ... 148s Setting up r-cran-knitr (1.50+dfsg-1) ... 148s Setting up g++ (4:14.2.0-1ubuntu1) ... 148s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 148s Setting up r-cran-cachem (1.1.0-1) ... 148s Setting up r-cran-sass (0.4.9+dfsg-1) ... 148s Setting up build-essential (12.12ubuntu1) ... 148s Setting up r-bioc-iranges (2.40.1-3) ... 148s Setting up r-cran-openssl (2.3.2+dfsg-1) ... 148s Setting up r-cran-fontawesome (0.5.3-1) ... 148s Setting up gfortran (4:14.2.0-1ubuntu1) ... 148s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 148s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 148s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 148s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 148s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 148s Setting up texlive-bibtex-extra (2024.20250309-2) ... 148s Setting up r-cran-httr (1.4.7+dfsg-1) ... 148s Setting up r-cran-memoise (2.0.1-1) ... 148s Setting up r-cran-promises (1.3.2+dfsg-1) ... 148s Setting up r-bioc-xvector (0.46.0-2) ... 148s Setting up r-base-dev (4.5.0-3) ... 148s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 148s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 148s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 148s Setting up r-cran-bslib (0.9.0+dfsg-3) ... 148s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 148s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 148s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 148s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 148s Setting up r-cran-bookdown (0.42+dfsg-1) ... 148s Setting up r-bioc-keggrest (1.46.0+dfsg-3) ... 148s Setting up r-bioc-biocstyle (2.34.0+dfsg-1) ... 148s Processing triggers for libc-bin (2.41-6ubuntu1) ... 148s Processing triggers for man-db (2.13.0-1) ... 149s Processing triggers for install-info (7.1.1-1) ... 149s Processing triggers for tex-common (6.19) ... 150s Running updmap-sys. This may take some time... done. 150s Running mktexlsr /var/lib/texmf ... done. 150s Building format(s) --all. 186s This may take some time... done. 187s autopkgtest [14:48:16]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 187s autopkgtest [14:48:16]: test pkg-r-autopkgtest: [----------------------- 187s Test: Try to load the R library KEGGREST 188s 188s R version 4.5.0 (2025-04-11) -- "How About a Twenty-Six" 188s Copyright (C) 2025 The R Foundation for Statistical Computing 188s Platform: aarch64-unknown-linux-gnu 188s 188s R is free software and comes with ABSOLUTELY NO WARRANTY. 188s You are welcome to redistribute it under certain conditions. 188s Type 'license()' or 'licence()' for distribution details. 188s 188s R is a collaborative project with many contributors. 188s Type 'contributors()' for more information and 188s 'citation()' on how to cite R or R packages in publications. 188s 188s Type 'demo()' for some demos, 'help()' for on-line help, or 188s 'help.start()' for an HTML browser interface to help. 188s Type 'q()' to quit R. 188s 188s > library('KEGGREST') 190s > 190s Other tests are currently unsupported! 190s They will be progressively added. 190s autopkgtest [14:48:19]: test pkg-r-autopkgtest: -----------------------] 191s pkg-r-autopkgtest PASS 191s autopkgtest [14:48:20]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 191s autopkgtest [14:48:20]: @@@@@@@@@@@@@@@@@@@@ summary 191s pkg-r-autopkgtest PASS 207s nova [W] Using flock in prodstack7-arm64 207s Creating nova instance adt-questing-arm64-r-bioc-keggrest-20250502-143826-juju-7f2275-prod-proposed-migration-environment-15-7cc6bde3-77dc-4c51-b594-1c1552547456 from image adt/ubuntu-questing-arm64-server-20250502.img (UUID 8e5d326b-32f5-49da-83ce-e406e786e537)... 207s nova [W] Timed out waiting for a1fd7ced-a2ac-41f5-8458-8c42983ff817 to get deleted.