0s autopkgtest [14:38:23]: starting date and time: 2025-05-02 14:38:23+0000 0s autopkgtest [14:38:23]: git checkout: 9986aa8c Merge branch 'skia/fix_network_interface' into 'ubuntu/production' 0s autopkgtest [14:38:23]: host juju-7f2275-prod-proposed-migration-environment-23; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.6nmbspcy/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-base,src:r-bioc-bioccheck --apt-upgrade r-bioc-iranges --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=r-base/4.5.0-3 r-bioc-bioccheck/1.42.1+dfsg-2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-23@bos03-arm64-21.secgroup --name adt-questing-arm64-r-bioc-iranges-20250502-143822-juju-7f2275-prod-proposed-migration-environment-23-bb0a5a26-c460-4e5d-82ef-4264b0859e17 --image adt/ubuntu-questing-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-23 --net-id=net_prod-proposed-migration -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 284s autopkgtest [14:43:07]: testbed dpkg architecture: arm64 285s autopkgtest [14:43:08]: testbed apt version: 3.0.0 286s autopkgtest [14:43:09]: @@@@@@@@@@@@@@@@@@@@ test bed setup 286s autopkgtest [14:43:09]: testbed release detected to be: None 288s autopkgtest [14:43:11]: updating testbed package index (apt update) 288s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB] 289s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 289s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 289s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 289s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [44.2 kB] 289s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [2024 kB] 289s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [164 kB] 289s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 Packages [204 kB] 289s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 Packages [1467 kB] 289s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse arm64 Packages [14.8 kB] 290s Fetched 4028 kB in 1s (3258 kB/s) 291s Reading package lists... 292s autopkgtest [14:43:15]: upgrading testbed (apt dist-upgrade and autopurge) 293s Reading package lists... 293s Building dependency tree... 293s Reading state information... 294s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 294s Starting 2 pkgProblemResolver with broken count: 0 294s Done 295s Entering ResolveByKeep 295s 295s Calculating upgrade... 296s The following packages will be upgraded: 296s fwupd htop libftdi1-2 libfwupd3 libnpth0t64 libsensors-config libsensors5 296s liburcu8t64 mokutil mtd-utils nano usb.ids 296s 12 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 296s Need to get 6772 kB of archives. 296s After this operation, 736 kB of additional disk space will be used. 296s Get:1 http://ftpmaster.internal/ubuntu questing/main arm64 libnpth0t64 arm64 1.8-3 [8818 B] 296s Get:2 http://ftpmaster.internal/ubuntu questing/main arm64 libsensors-config all 1:3.6.2-2 [6756 B] 296s Get:3 http://ftpmaster.internal/ubuntu questing/main arm64 libsensors5 arm64 1:3.6.2-2 [28.9 kB] 296s Get:4 http://ftpmaster.internal/ubuntu questing/main arm64 liburcu8t64 arm64 0.15.2-2 [64.2 kB] 296s Get:5 http://ftpmaster.internal/ubuntu questing/main arm64 nano arm64 8.4-1 [290 kB] 296s Get:6 http://ftpmaster.internal/ubuntu questing/main arm64 usb.ids all 2025.04.01-1 [223 kB] 297s Get:7 http://ftpmaster.internal/ubuntu questing/main arm64 fwupd arm64 2.0.8-3 [5315 kB] 297s Get:8 http://ftpmaster.internal/ubuntu questing/main arm64 libfwupd3 arm64 2.0.8-3 [131 kB] 297s Get:9 http://ftpmaster.internal/ubuntu questing/main arm64 htop arm64 3.4.1-4 [177 kB] 297s Get:10 http://ftpmaster.internal/ubuntu questing/main arm64 libftdi1-2 arm64 1.5-10 [30.6 kB] 297s Get:11 http://ftpmaster.internal/ubuntu questing/main arm64 mokutil arm64 0.7.2-1 [28.4 kB] 297s Get:12 http://ftpmaster.internal/ubuntu questing/main arm64 mtd-utils arm64 1:2.3.0-1ubuntu1 [469 kB] 299s Fetched 6772 kB in 1s (6116 kB/s) 300s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117820 files and directories currently installed.) 300s Preparing to unpack .../libnpth0t64_1.8-3_arm64.deb ... 300s Unpacking libnpth0t64:arm64 (1.8-3) over (1.8-2) ... 301s Setting up libnpth0t64:arm64 (1.8-3) ... 301s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117820 files and directories currently installed.) 301s Preparing to unpack .../00-libsensors-config_1%3a3.6.2-2_all.deb ... 301s Unpacking libsensors-config (1:3.6.2-2) over (1:3.6.0-10) ... 301s Preparing to unpack .../01-libsensors5_1%3a3.6.2-2_arm64.deb ... 301s Unpacking libsensors5:arm64 (1:3.6.2-2) over (1:3.6.0-10) ... 302s Preparing to unpack .../02-liburcu8t64_0.15.2-2_arm64.deb ... 302s Unpacking liburcu8t64:arm64 (0.15.2-2) over (0.15.1-1) ... 302s Preparing to unpack .../03-nano_8.4-1_arm64.deb ... 302s Unpacking nano (8.4-1) over (8.3-1) ... 303s Preparing to unpack .../04-usb.ids_2025.04.01-1_all.deb ... 303s Unpacking usb.ids (2025.04.01-1) over (2025.01.14-1) ... 303s Preparing to unpack .../05-fwupd_2.0.8-3_arm64.deb ... 304s Unpacking fwupd (2.0.8-3) over (2.0.7-1) ... 306s Preparing to unpack .../06-libfwupd3_2.0.8-3_arm64.deb ... 306s Unpacking libfwupd3:arm64 (2.0.8-3) over (2.0.7-1) ... 306s Preparing to unpack .../07-htop_3.4.1-4_arm64.deb ... 306s Unpacking htop (3.4.1-4) over (3.4.0-2) ... 307s Preparing to unpack .../08-libftdi1-2_1.5-10_arm64.deb ... 307s Unpacking libftdi1-2:arm64 (1.5-10) over (1.5-8build1) ... 307s Preparing to unpack .../09-mokutil_0.7.2-1_arm64.deb ... 307s Unpacking mokutil (0.7.2-1) over (0.6.0-2build3) ... 308s Preparing to unpack .../10-mtd-utils_1%3a2.3.0-1ubuntu1_arm64.deb ... 308s Unpacking mtd-utils (1:2.3.0-1ubuntu1) over (1:2.2.0-2ubuntu2) ... 308s Setting up liburcu8t64:arm64 (0.15.2-2) ... 308s Setting up mokutil (0.7.2-1) ... 308s Setting up htop (3.4.1-4) ... 308s Setting up libsensors-config (1:3.6.2-2) ... 308s Installing new version of config file /etc/sensors3.conf ... 308s Setting up libfwupd3:arm64 (2.0.8-3) ... 308s Setting up mtd-utils (1:2.3.0-1ubuntu1) ... 308s Setting up libftdi1-2:arm64 (1.5-10) ... 308s Setting up usb.ids (2025.04.01-1) ... 308s Setting up libsensors5:arm64 (1:3.6.2-2) ... 308s Setting up nano (8.4-1) ... 308s Installing new version of config file /etc/nanorc ... 308s Setting up fwupd (2.0.8-3) ... 310s fwupd-refresh.service is a disabled or a static unit not running, not starting it. 310s fwupd.service is a disabled or a static unit not running, not starting it. 310s Processing triggers for man-db (2.13.0-1) ... 312s Processing triggers for dbus (1.16.2-2ubuntu1) ... 312s Processing triggers for install-info (7.1.1-1) ... 312s Processing triggers for libc-bin (2.41-6ubuntu1) ... 313s Reading package lists... 313s Building dependency tree... 313s Reading state information... 313s Starting pkgProblemResolver with broken count: 0 314s Starting 2 pkgProblemResolver with broken count: 0 314s Done 314s Solving dependencies... 315s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 315s autopkgtest [14:43:38]: rebooting testbed after setup commands that affected boot 320s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 353s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 379s autopkgtest [14:44:42]: testbed running kernel: Linux 6.14.0-15-generic #15-Ubuntu SMP PREEMPT_DYNAMIC Sun Apr 6 14:37:51 UTC 2025 385s autopkgtest [14:44:48]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-iranges 388s Get:1 http://ftpmaster.internal/ubuntu questing/universe r-bioc-iranges 2.40.1-2 (dsc) [2182 B] 388s Get:2 http://ftpmaster.internal/ubuntu questing/universe r-bioc-iranges 2.40.1-2 (tar) [487 kB] 388s Get:3 http://ftpmaster.internal/ubuntu questing/universe r-bioc-iranges 2.40.1-2 (diff) [5564 B] 388s gpgv: Signature made Sun Jan 12 02:44:20 2025 UTC 388s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 388s gpgv: issuer "crusoe@debian.org" 388s gpgv: Can't check signature: No public key 388s dpkg-source: warning: cannot verify inline signature for ./r-bioc-iranges_2.40.1-2.dsc: no acceptable signature found 388s autopkgtest [14:44:51]: testing package r-bioc-iranges version 2.40.1-2 389s autopkgtest [14:44:52]: build not needed 391s autopkgtest [14:44:54]: test pkg-r-autopkgtest: preparing testbed 392s Reading package lists... 392s Building dependency tree... 392s Reading state information... 393s Starting pkgProblemResolver with broken count: 14 393s Starting 2 pkgProblemResolver with broken count: 14 393s Investigating (0) r-base-core:arm64 < none -> 4.5.0-3 @un puN Ib > 393s Broken r-base-core:arm64 Breaks on r-bioc-iranges:arm64 < none -> 2.40.1-2 @un puN > (< 2.40.1-3~) 393s Considering r-bioc-iranges:arm64 43 as a solution to r-base-core:arm64 132 393s Investigating (0) r-cran-shiny:arm64 < none -> 1.10.0+dfsg-2 @un puN Ib > 393s Broken r-cran-shiny:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 0.4.10) 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-shiny:arm64 66 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-shiny:arm64 66 393s Investigating (0) r-cran-sass:arm64 < none -> 0.4.9+dfsg-1 @un puN Ib > 393s Broken r-cran-sass:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 0.4.10) 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-sass:arm64 62 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-sass:arm64 62 393s Investigating (0) r-cran-bslib:arm64 < none -> 0.9.0+dfsg-1syncable1 @un puN Ib > 393s Broken r-cran-bslib:arm64 Depends on r-cran-rlang:arm64 < none @un pH > 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-bslib:arm64 59 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-bslib:arm64 59 393s Investigating (0) r-cran-htmltools:arm64 < none -> 0.5.8.1-1 @un puN Ib > 393s Broken r-cran-htmltools:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.0.0) 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-htmltools:arm64 49 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-htmltools:arm64 49 393s Investigating (0) r-cran-vctrs:arm64 < none -> 0.6.5-1 @un puN Ib > 393s Broken r-cran-vctrs:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.1.0) 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-vctrs:arm64 44 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-vctrs:arm64 44 393s Investigating (0) r-cran-fontawesome:arm64 < none -> 0.5.3-1 @un puN Ib > 393s Broken r-cran-fontawesome:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.0.6) 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-fontawesome:arm64 34 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-fontawesome:arm64 34 393s Investigating (0) r-cran-rsqlite:arm64 < none -> 2.3.9-1 @un puN Ib > 393s Broken r-cran-rsqlite:arm64 Depends on r-cran-rlang:arm64 < none @un pH > 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-rsqlite:arm64 22 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-rsqlite:arm64 22 393s Investigating (0) r-cran-later:arm64 < none -> 1.4.1+dfsg-1 @un puN Ib > 393s Broken r-cran-later:arm64 Depends on r-cran-rlang:arm64 < none @un pH > 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-later:arm64 20 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-later:arm64 20 393s Investigating (0) r-cran-lifecycle:arm64 < none -> 1.0.4+dfsg-1 @un puN Ib > 393s Broken r-cran-lifecycle:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 1.1.0) 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-lifecycle:arm64 17 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-lifecycle:arm64 17 393s Investigating (0) r-cran-cachem:arm64 < none -> 1.1.0-1 @un puN Ib > 393s Broken r-cran-cachem:arm64 Depends on r-cran-rlang:arm64 < none @un pH > 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-cachem:arm64 12 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-cachem:arm64 12 393s Investigating (0) r-cran-promises:arm64 < none -> 1.3.2+dfsg-1 @un puN Ib > 393s Broken r-cran-promises:arm64 Depends on r-cran-rlang:arm64 < none @un pH > 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-promises:arm64 9 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-promises:arm64 9 393s Investigating (0) r-cran-memoise:arm64 < none -> 2.0.1-1 @un puN Ib > 393s Broken r-cran-memoise:arm64 Depends on r-cran-rlang:arm64 < none @un pH > (>= 0.4.10) 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-memoise:arm64 6 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-memoise:arm64 6 393s Investigating (0) r-cran-blob:arm64 < none -> 1.2.4-1 @un puN Ib > 393s Broken r-cran-blob:arm64 Depends on r-cran-rlang:arm64 < none @un pH > 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-blob:arm64 2 393s Considering r-cran-rlang:arm64 10 as a solution to r-cran-blob:arm64 2 393s Done 393s Some packages could not be installed. This may mean that you have 393s requested an impossible situation or if you are using the unstable 393s distribution that some required packages have not yet been created 393s or been moved out of Incoming. 393s The following information may help to resolve the situation: 393s 393s The following packages have unmet dependencies: 393s r-base-core : Breaks: r-bioc-iranges (< 2.40.1-3~) but 2.40.1-2 is to be installed 393s r-cran-blob : Depends: r-cran-rlang but it is not installable 393s r-cran-bslib : Depends: r-cran-rlang but it is not installable 393s r-cran-cachem : Depends: r-cran-rlang but it is not installable 393s r-cran-fontawesome : Depends: r-cran-rlang (>= 1.0.6) but it is not installable 393s r-cran-htmltools : Depends: r-cran-rlang (>= 1.0.0) but it is not installable 393s r-cran-later : Depends: r-cran-rlang but it is not installable 393s r-cran-lifecycle : Depends: r-cran-rlang (>= 1.1.0) but it is not installable 393s r-cran-memoise : Depends: r-cran-rlang (>= 0.4.10) but it is not installable 393s r-cran-promises : Depends: r-cran-rlang but it is not installable 393s r-cran-rsqlite : Depends: r-cran-rlang but it is not installable 393s r-cran-sass : Depends: r-cran-rlang (>= 0.4.10) but it is not installable 393s r-cran-shiny : Depends: r-cran-rlang (>= 0.4.10) but it is not installable 393s r-cran-vctrs : Depends: r-cran-rlang (>= 1.1.0) but it is not installable 393s E: Unable to correct problems, you have held broken packages. 393s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from questing-proposed 394s Reading package lists... 394s Building dependency tree... 394s Reading state information... 395s Starting pkgProblemResolver with broken count: 0 395s Starting 2 pkgProblemResolver with broken count: 0 395s Done 396s The following NEW packages will be installed: 396s build-essential cpp cpp-14 cpp-14-aarch64-linux-gnu cpp-aarch64-linux-gnu 396s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 396s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 396s g++ g++-14 g++-14-aarch64-linux-gnu g++-aarch64-linux-gnu gcc gcc-14 396s gcc-14-aarch64-linux-gnu gcc-aarch64-linux-gnu gfortran gfortran-14 396s gfortran-14-aarch64-linux-gnu gfortran-aarch64-linux-gnu icu-devtools 396s javascript-common libasan8 libbibtex-parser-perl libblas-dev libblas3 396s libboost-dev libboost1.83-dev libbz2-dev libcairo2 libcc1-0 libdatrie1 396s libdeflate-dev libdeflate0 libfontconfig1 libgcc-14-dev libgfortran-14-dev 396s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhwasan0 libice6 396s libicu-dev libio-string-perl libisl23 libitm1 libjbig0 libjpeg-dev 396s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap 396s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 396s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 396s libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 396s libjs-popper.js libjs-prettify libjs-sifter.js 396s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 396s liblatex-tounicode-perl liblerc4 liblsan0 liblua5.4-0 liblzma-dev libmpc3 396s libmpfi0 libncurses-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 396s libpaper-utils libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 396s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libptexenc1 396s libreadline-dev libsharpyuv0 libsm6 libstdc++-14-dev libsynctex2 libtcl8.6 396s libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev 396s libtk8.6 libtsan2 libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 396s libxft2 libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6t64 libzstd-dev 396s libzzip-0-13t64 littler node-bootstrap-sass node-html5shiv 396s node-normalize.css pandoc pandoc-data pkg-r-autopkgtest pkgconf pkgconf-bin 396s r-base-core r-base-dev r-bioc-annotationdbi r-bioc-biobase 396s r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel r-bioc-biocstyle 396s r-bioc-biocversion r-bioc-biostrings r-bioc-delayedarray r-bioc-genomeinfodb 396s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 396s r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics 396s r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays 396s r-bioc-s4vectors r-bioc-sparsearray r-bioc-summarizedexperiment 396s r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass 396s r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 396s r-cran-bitops r-cran-blob r-cran-bookdown r-cran-bslib r-cran-cachem 396s r-cran-cli r-cran-codetools r-cran-commonmark r-cran-cpp11 r-cran-crayon 396s r-cran-curl r-cran-dbi r-cran-digest r-cran-evaluate r-cran-fastmap 396s r-cran-fontawesome r-cran-formatr r-cran-fs r-cran-futile.logger 396s r-cran-futile.options r-cran-glue r-cran-highr r-cran-htmltools 396s r-cran-httpuv r-cran-httr r-cran-jquerylib r-cran-jsonlite r-cran-knitr 396s r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lifecycle r-cran-littler 396s r-cran-magrittr r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mime 396s r-cran-openssl r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr r-cran-png 396s r-cran-promises r-cran-r6 r-cran-rappdirs r-cran-rcpp r-cran-rcurl 396s r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite 396s r-cran-runit r-cran-sass r-cran-shiny r-cran-snow r-cran-sourcetools 396s r-cran-sys r-cran-tinytex r-cran-vctrs r-cran-withr r-cran-xfun r-cran-xml 396s r-cran-xtable r-cran-yaml t1utils tex-common texlive-base 396s texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common 396s xdg-utils zip zlib1g-dev 396s The following packages will be upgraded: 396s gcc-14-base gcc-15-base libatomic1 libgcc-s1 libstdc++6 libtirpc-common 396s libtirpc3t64 libzstd1 zstd 396s 9 upgraded, 252 newly installed, 0 to remove and 93 not upgraded. 396s Need to get 408 MB of archives. 396s After this operation, 1314 MB of additional disk space will be used. 396s Get:1 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 gcc-15-base arm64 15.1.0-1ubuntu1 [54.5 kB] 397s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libgcc-s1 arm64 15.1.0-1ubuntu1 [61.0 kB] 397s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libatomic1 arm64 15.1.0-1ubuntu1 [11.3 kB] 397s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libstdc++6 arm64 15.1.0-1ubuntu1 [761 kB] 397s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libzstd1 arm64 1.5.7+dfsg-1 [283 kB] 397s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 gcc-14-base arm64 14.2.0-22ubuntu1 [55.2 kB] 397s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libtirpc-common all 1.3.6+ds-1 [8198 B] 397s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libtirpc3t64 arm64 1.3.6+ds-1 [83.9 kB] 397s Get:9 http://ftpmaster.internal/ubuntu questing/main arm64 libisl23 arm64 0.27-1 [676 kB] 397s Get:10 http://ftpmaster.internal/ubuntu questing/main arm64 libmpc3 arm64 1.3.1-1build2 [56.8 kB] 397s Get:11 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-22ubuntu1 [10.6 MB] 397s Get:12 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 cpp-14 arm64 14.2.0-22ubuntu1 [1030 B] 397s Get:13 http://ftpmaster.internal/ubuntu questing/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [5558 B] 397s Get:14 http://ftpmaster.internal/ubuntu questing/main arm64 cpp arm64 4:14.2.0-1ubuntu1 [22.4 kB] 397s Get:15 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libcc1-0 arm64 15.1.0-1ubuntu1 [49.1 kB] 397s Get:16 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libgomp1 arm64 15.1.0-1ubuntu1 [147 kB] 397s Get:17 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libitm1 arm64 15.1.0-1ubuntu1 [28.1 kB] 397s Get:18 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libasan8 arm64 15.1.0-1ubuntu1 [2922 kB] 397s Get:19 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 liblsan0 arm64 15.1.0-1ubuntu1 [1317 kB] 397s Get:20 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libtsan2 arm64 15.1.0-1ubuntu1 [2691 kB] 397s Get:21 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libubsan1 arm64 15.1.0-1ubuntu1 [1176 kB] 398s Get:22 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libhwasan0 arm64 15.1.0-1ubuntu1 [1639 kB] 398s Get:23 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libgcc-14-dev arm64 14.2.0-22ubuntu1 [2593 kB] 398s Get:24 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-22ubuntu1 [20.9 MB] 398s Get:25 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 gcc-14 arm64 14.2.0-22ubuntu1 [536 kB] 398s Get:26 http://ftpmaster.internal/ubuntu questing/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1200 B] 398s Get:27 http://ftpmaster.internal/ubuntu questing/main arm64 gcc arm64 4:14.2.0-1ubuntu1 [4998 B] 398s Get:28 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libstdc++-14-dev arm64 14.2.0-22ubuntu1 [2820 kB] 398s Get:29 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-22ubuntu1 [12.1 MB] 399s Get:30 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 g++-14 arm64 14.2.0-22ubuntu1 [24.0 kB] 399s Get:31 http://ftpmaster.internal/ubuntu questing/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [956 B] 399s Get:32 http://ftpmaster.internal/ubuntu questing/main arm64 g++ arm64 4:14.2.0-1ubuntu1 [1080 B] 399s Get:33 http://ftpmaster.internal/ubuntu questing/main arm64 build-essential arm64 12.12ubuntu1 [5082 B] 399s Get:34 http://ftpmaster.internal/ubuntu questing/main arm64 dctrl-tools arm64 2.24-3build3 [103 kB] 399s Get:35 http://ftpmaster.internal/ubuntu questing/main arm64 fonts-dejavu-mono all 2.37-8 [502 kB] 399s Get:36 http://ftpmaster.internal/ubuntu questing/main arm64 fonts-dejavu-core all 2.37-8 [835 kB] 399s Get:37 http://ftpmaster.internal/ubuntu questing/main arm64 fontconfig-config arm64 2.15.0-2.2ubuntu1 [37.9 kB] 399s Get:38 http://ftpmaster.internal/ubuntu questing/main arm64 libfontconfig1 arm64 2.15.0-2.2ubuntu1 [144 kB] 399s Get:39 http://ftpmaster.internal/ubuntu questing/main arm64 fontconfig arm64 2.15.0-2.2ubuntu1 [191 kB] 399s Get:40 http://ftpmaster.internal/ubuntu questing/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 399s Get:41 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-4 [119 kB] 399s Get:42 http://ftpmaster.internal/ubuntu questing/universe arm64 fonts-lmodern all 2.005-1 [4799 kB] 399s Get:43 http://ftpmaster.internal/ubuntu questing/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 399s Get:44 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libgfortran5 arm64 15.1.0-1ubuntu1 [444 kB] 399s Get:45 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libgfortran-14-dev arm64 14.2.0-22ubuntu1 [498 kB] 399s Get:46 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-22ubuntu1 [11.4 MB] 399s Get:47 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 gfortran-14 arm64 14.2.0-22ubuntu1 [14.4 kB] 399s Get:48 http://ftpmaster.internal/ubuntu questing/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.2.0-1ubuntu1 [1022 B] 399s Get:49 http://ftpmaster.internal/ubuntu questing/main arm64 gfortran arm64 4:14.2.0-1ubuntu1 [1166 B] 399s Get:50 http://ftpmaster.internal/ubuntu questing/main arm64 icu-devtools arm64 76.1-1ubuntu2 [213 kB] 399s Get:51 http://ftpmaster.internal/ubuntu questing/main arm64 javascript-common all 12 [5216 B] 399s Get:52 http://ftpmaster.internal/ubuntu questing/main arm64 libio-string-perl all 1.08-4 [11.1 kB] 399s Get:53 http://ftpmaster.internal/ubuntu questing/universe arm64 liblatex-tounicode-perl all 0.55-1 [28.8 kB] 399s Get:54 http://ftpmaster.internal/ubuntu questing/universe arm64 libbibtex-parser-perl all 1.05+dfsg-1 [16.5 kB] 399s Get:55 http://ftpmaster.internal/ubuntu questing/main arm64 libblas3 arm64 3.12.1-2 [161 kB] 399s Get:56 http://ftpmaster.internal/ubuntu questing/main arm64 libblas-dev arm64 3.12.1-2 [126 kB] 399s Get:57 http://ftpmaster.internal/ubuntu questing/main arm64 libboost1.83-dev arm64 1.83.0-4.2ubuntu1 [10.7 MB] 400s Get:58 http://ftpmaster.internal/ubuntu questing/main arm64 libboost-dev arm64 1.83.0.2ubuntu1 [4468 B] 400s Get:59 http://ftpmaster.internal/ubuntu questing/main arm64 libbz2-dev arm64 1.0.8-6 [36.1 kB] 400s Get:60 http://ftpmaster.internal/ubuntu questing/main arm64 libpixman-1-0 arm64 0.44.0-3 [197 kB] 400s Get:61 http://ftpmaster.internal/ubuntu questing/main arm64 libxcb-render0 arm64 1.17.0-2 [16.6 kB] 400s Get:62 http://ftpmaster.internal/ubuntu questing/main arm64 libxcb-shm0 arm64 1.17.0-2 [5884 B] 400s Get:63 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libxrender1 arm64 1:0.9.12-1 [19.5 kB] 400s Get:64 http://ftpmaster.internal/ubuntu questing/main arm64 libcairo2 arm64 1.18.4-1 [560 kB] 400s Get:65 http://ftpmaster.internal/ubuntu questing/main arm64 libdatrie1 arm64 0.2.13-3build1 [19.2 kB] 400s Get:66 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libdeflate0 arm64 1.23-2 [46.4 kB] 400s Get:67 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libdeflate-dev arm64 1.23-2 [53.6 kB] 400s Get:68 http://ftpmaster.internal/ubuntu questing/main arm64 libgraphite2-3 arm64 1.3.14-2ubuntu1 [70.6 kB] 400s Get:69 http://ftpmaster.internal/ubuntu questing/main arm64 libharfbuzz0b arm64 10.2.0-1 [490 kB] 400s Get:70 http://ftpmaster.internal/ubuntu questing/main arm64 x11-common all 1:7.7+23ubuntu4 [21.8 kB] 400s Get:71 http://ftpmaster.internal/ubuntu questing/main arm64 libice6 arm64 2:1.1.1-1 [42.3 kB] 400s Get:72 http://ftpmaster.internal/ubuntu questing/main arm64 libicu-dev arm64 76.1-1ubuntu2 [12.2 MB] 400s Get:73 http://ftpmaster.internal/ubuntu questing/main arm64 libjpeg-turbo8 arm64 2.1.5-3ubuntu2 [165 kB] 400s Get:74 http://ftpmaster.internal/ubuntu questing/main arm64 libjpeg-turbo8-dev arm64 2.1.5-3ubuntu2 [306 kB] 400s Get:75 http://ftpmaster.internal/ubuntu questing/main arm64 libjpeg8 arm64 8c-2ubuntu11 [2148 B] 400s Get:76 http://ftpmaster.internal/ubuntu questing/main arm64 libjpeg8-dev arm64 8c-2ubuntu11 [1484 B] 400s Get:77 http://ftpmaster.internal/ubuntu questing/main arm64 libjpeg-dev arm64 8c-2ubuntu11 [1482 B] 400s Get:78 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 libjs-bootstrap all 3.4.1+dfsg-4 [129 kB] 400s Get:79 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 400s Get:80 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 libjs-bootstrap4 all 4.6.2+dfsg-1 [532 kB] 400s Get:81 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-d3 all 3.5.17-4 [132 kB] 400s Get:82 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-es5-shim all 4.6.7-2 [39.8 kB] 400s Get:83 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 400s Get:84 http://ftpmaster.internal/ubuntu questing/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 400s Get:85 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 400s Get:86 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 400s Get:87 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 400s Get:88 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 400s Get:89 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 400s Get:90 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 400s Get:91 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 400s Get:92 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 400s Get:93 http://ftpmaster.internal/ubuntu questing/universe arm64 libkpathsea6 arm64 2024.20240313.70630+ds-6 [64.4 kB] 400s Get:94 http://ftpmaster.internal/ubuntu questing/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB] 400s Get:95 http://ftpmaster.internal/ubuntu questing/main arm64 liblapack-dev arm64 3.12.1-2 [4439 kB] 400s Get:96 http://ftpmaster.internal/ubuntu questing/main arm64 liblerc4 arm64 4.0.0+ds-5ubuntu1 [167 kB] 400s Get:97 http://ftpmaster.internal/ubuntu questing/main arm64 liblua5.4-0 arm64 5.4.7-1 [158 kB] 400s Get:98 http://ftpmaster.internal/ubuntu questing/universe arm64 libmpfi0 arm64 1.5.4+ds-4 [35.3 kB] 400s Get:99 http://ftpmaster.internal/ubuntu questing/main arm64 libncurses-dev arm64 6.5+20250216-2 [389 kB] 400s Get:100 http://ftpmaster.internal/ubuntu questing/main arm64 libthai-data all 0.1.29-2build1 [158 kB] 400s Get:101 http://ftpmaster.internal/ubuntu questing/main arm64 libthai0 arm64 0.1.29-2build1 [18.2 kB] 400s Get:102 http://ftpmaster.internal/ubuntu questing/main arm64 libpango-1.0-0 arm64 1.56.3-1 [238 kB] 401s Get:103 http://ftpmaster.internal/ubuntu questing/main arm64 libpangoft2-1.0-0 arm64 1.56.3-1 [49.8 kB] 401s Get:104 http://ftpmaster.internal/ubuntu questing/main arm64 libpangocairo-1.0-0 arm64 1.56.3-1 [27.6 kB] 401s Get:105 http://ftpmaster.internal/ubuntu questing/main arm64 libpaper2 arm64 2.2.5-0.3 [17.3 kB] 401s Get:106 http://ftpmaster.internal/ubuntu questing/main arm64 libpaper-utils arm64 2.2.5-0.3 [15.4 kB] 401s Get:107 http://ftpmaster.internal/ubuntu questing/main arm64 libpcre2-16-0 arm64 10.45-1 [222 kB] 401s Get:108 http://ftpmaster.internal/ubuntu questing/main arm64 libpcre2-32-0 arm64 10.45-1 [210 kB] 401s Get:109 http://ftpmaster.internal/ubuntu questing/main arm64 libpcre2-posix3 arm64 10.45-1 [7084 B] 401s Get:110 http://ftpmaster.internal/ubuntu questing/main arm64 libpcre2-dev arm64 10.45-1 [768 kB] 401s Get:111 http://ftpmaster.internal/ubuntu questing/main arm64 libpkgconf3 arm64 1.8.1-4 [31.4 kB] 401s Get:112 http://ftpmaster.internal/ubuntu questing/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1ubuntu1 [894 kB] 401s Get:113 http://ftpmaster.internal/ubuntu questing/main arm64 libpng-dev arm64 1.6.47-1.1 [269 kB] 401s Get:114 http://ftpmaster.internal/ubuntu questing/universe arm64 libpotrace0 arm64 1.16-2build1 [16.0 kB] 401s Get:115 http://ftpmaster.internal/ubuntu questing/universe arm64 libptexenc1 arm64 2024.20240313.70630+ds-6 [41.7 kB] 401s Get:116 http://ftpmaster.internal/ubuntu questing/main arm64 libreadline-dev arm64 8.2-6 [179 kB] 401s Get:117 http://ftpmaster.internal/ubuntu questing/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [16.9 kB] 401s Get:118 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libsm6 arm64 2:1.2.6-1 [16.6 kB] 401s Get:119 http://ftpmaster.internal/ubuntu questing/universe arm64 libsynctex2 arm64 2024.20240313.70630+ds-6 [60.4 kB] 401s Get:120 http://ftpmaster.internal/ubuntu questing/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [987 kB] 401s Get:121 http://ftpmaster.internal/ubuntu questing/universe arm64 libteckit0 arm64 2.5.12+ds1-1 [405 kB] 401s Get:122 http://ftpmaster.internal/ubuntu questing/universe arm64 libtexlua53-5 arm64 2024.20240313.70630+ds-6 [122 kB] 401s Get:123 http://ftpmaster.internal/ubuntu questing/main arm64 libjbig0 arm64 2.1-6.1ubuntu2 [29.3 kB] 401s Get:124 http://ftpmaster.internal/ubuntu questing/main arm64 libwebp7 arm64 1.5.0-0.1 [194 kB] 401s Get:125 http://ftpmaster.internal/ubuntu questing/main arm64 libtiff6 arm64 4.7.0-3ubuntu1 [197 kB] 401s Get:126 http://ftpmaster.internal/ubuntu questing/main arm64 libxft2 arm64 2.3.6-1build1 [44.1 kB] 401s Get:127 http://ftpmaster.internal/ubuntu questing/main arm64 libxss1 arm64 1:1.2.3-1build3 [7244 B] 401s Get:128 http://ftpmaster.internal/ubuntu questing/main arm64 libtk8.6 arm64 8.6.16-1 [776 kB] 401s Get:129 http://ftpmaster.internal/ubuntu questing/main arm64 libxt6t64 arm64 1:1.2.1-1.2build1 [168 kB] 401s Get:130 http://ftpmaster.internal/ubuntu questing/main arm64 libxmu6 arm64 2:1.1.3-3build2 [47.5 kB] 401s Get:131 http://ftpmaster.internal/ubuntu questing/main arm64 libxpm4 arm64 1:3.5.17-1build2 [35.1 kB] 401s Get:132 http://ftpmaster.internal/ubuntu questing/main arm64 libxaw7 arm64 2:1.0.16-1 [184 kB] 401s Get:133 http://ftpmaster.internal/ubuntu questing/main arm64 libxi6 arm64 2:1.8.2-1 [32.4 kB] 401s Get:134 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libzstd-dev arm64 1.5.7+dfsg-1 [358 kB] 401s Get:135 http://ftpmaster.internal/ubuntu questing/universe arm64 libzzip-0-13t64 arm64 0.13.78+dfsg.1-0.1 [30.8 kB] 401s Get:136 http://ftpmaster.internal/ubuntu questing/main arm64 zip arm64 3.0-14ubuntu2 [173 kB] 401s Get:137 http://ftpmaster.internal/ubuntu questing/main arm64 unzip arm64 6.0-28ubuntu6 [178 kB] 401s Get:138 http://ftpmaster.internal/ubuntu questing/main arm64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 401s Get:139 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-base-core arm64 4.5.0-3 [28.7 MB] 402s Get:140 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-cran-littler arm64 0.3.21-1 [99.7 kB] 402s Get:141 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 littler all 0.3.21-1 [2584 B] 402s Get:142 http://ftpmaster.internal/ubuntu questing/universe arm64 node-bootstrap-sass all 3.4.3-2 [187 kB] 402s Get:143 http://ftpmaster.internal/ubuntu questing/universe arm64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 402s Get:144 http://ftpmaster.internal/ubuntu questing/universe arm64 node-normalize.css all 8.0.1-5 [10.8 kB] 402s Get:145 http://ftpmaster.internal/ubuntu questing/universe arm64 pandoc-data all 3.1.11.1-3build1 [78.8 kB] 402s Get:146 http://ftpmaster.internal/ubuntu questing/universe arm64 pandoc arm64 3.1.11.1+ds-2 [28.1 MB] 403s Get:147 http://ftpmaster.internal/ubuntu questing/main arm64 liblzma-dev arm64 5.6.4-1ubuntu1 [180 kB] 403s Get:148 http://ftpmaster.internal/ubuntu questing/main arm64 pkgconf-bin arm64 1.8.1-4 [20.9 kB] 403s Get:149 http://ftpmaster.internal/ubuntu questing/main arm64 pkgconf arm64 1.8.1-4 [16.7 kB] 403s Get:150 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libtirpc-dev arm64 1.3.6+ds-1 [202 kB] 404s Get:151 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-base-dev all 4.5.0-3 [4188 B] 404s Get:152 http://ftpmaster.internal/ubuntu questing/universe arm64 pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 404s Get:153 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-biocgenerics all 0.52.0-2 [624 kB] 404s Get:154 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-biobase arm64 2.66.0-2 [2331 kB] 404s Get:155 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-s4vectors arm64 0.44.0+dfsg-2 [2054 kB] 404s Get:156 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-bioc-iranges arm64 2.40.1-3 [2301 kB] 404s Get:157 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-dbi all 1.2.3-1 [853 kB] 404s Get:158 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-bit arm64 4.6.0+dfsg-1 [450 kB] 404s Get:159 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-bit64 arm64 4.6.0-1-1ubuntu2 [497 kB] 404s Get:160 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-cran-rlang arm64 1.1.5-3 [1706 kB] 404s Get:161 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-cli arm64 3.6.4-1 [1374 kB] 404s Get:162 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-glue arm64 1.8.0-1 [163 kB] 404s Get:163 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 404s Get:164 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-vctrs arm64 0.6.5-1 [1327 kB] 404s Get:165 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-blob all 1.2.4-1 [49.8 kB] 404s Get:166 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-fastmap arm64 1.2.0-1 [70.6 kB] 404s Get:167 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-cachem arm64 1.1.0-1 [74.1 kB] 404s Get:168 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-memoise all 2.0.1-1 [53.9 kB] 404s Get:169 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 404s Get:170 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-plogr all 0.2.0-3build1 [15.1 kB] 404s Get:171 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-cpp11 all 0.5.2-1 [233 kB] 404s Get:172 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-rsqlite arm64 2.3.9-1 [1247 kB] 404s Get:173 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-curl arm64 6.2.1+dfsg-1ubuntu1 [196 kB] 404s Get:174 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-jsonlite arm64 1.9.1+dfsg-1 [445 kB] 404s Get:175 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-mime arm64 0.12-2 [35.8 kB] 404s Get:176 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-sys arm64 3.4.3-1 [45.2 kB] 404s Get:177 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-askpass arm64 1.2.1-1 [24.8 kB] 404s Get:178 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-openssl arm64 2.3.2+dfsg-1 [406 kB] 404s Get:179 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-r6 all 2.6.1-1 [101 kB] 404s Get:180 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] 404s Get:181 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-png arm64 0.1-8-1build2 [40.1 kB] 404s Get:182 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 404s Get:183 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-xvector arm64 0.46.0-2 [618 kB] 404s Get:184 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 404s Get:185 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 405s Get:186 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 405s Get:187 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-crayon all 1.5.3-1 [165 kB] 405s Get:188 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-biostrings arm64 2.74.1+dfsg-2 [13.3 MB] 406s Get:189 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-bioc-keggrest all 1.46.0+dfsg-3 [183 kB] 406s Get:190 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-annotationdbi all 1.68.0-2 [4857 kB] 406s Get:191 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 406s Get:192 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-formatr all 1.14-2 [152 kB] 406s Get:193 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-lambda.r all 1.2.4-2build1 [119 kB] 406s Get:194 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 406s Get:195 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 406s Get:196 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-snow all 1:0.4.4-2 [97.6 kB] 406s Get:197 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-codetools all 0.2-20-1 [90.5 kB] 406s Get:198 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-bh all 1.84.0-1 [5962 B] 406s Get:199 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-biocparallel arm64 1.40.0-2 [1333 kB] 406s Get:200 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-base64enc arm64 0.1-3-3 [27.4 kB] 406s Get:201 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-digest arm64 0.6.37-1 [200 kB] 406s Get:202 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-htmltools arm64 0.5.8.1-1 [373 kB] 406s Get:203 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-evaluate all 1.0.3-1 [114 kB] 406s Get:204 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-xfun arm64 0.51+dfsg-1 [573 kB] 406s Get:205 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-highr all 0.11+dfsg-1 [38.5 kB] 406s Get:206 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-yaml arm64 2.3.10-1 [108 kB] 406s Get:207 http://ftpmaster.internal/ubuntu questing/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 407s Get:208 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-knitr all 1.50+dfsg-1 [840 kB] 407s Get:209 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 407s Get:210 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-fs arm64 1.6.5+dfsg-1 [244 kB] 407s Get:211 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-rappdirs arm64 0.3.3-1 [47.5 kB] 407s Get:212 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-sass arm64 0.4.9+dfsg-1 [957 kB] 407s Get:213 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-cran-bslib all 0.9.0+dfsg-3 [4562 kB] 407s Get:214 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-fontawesome all 0.5.3-1 [1331 kB] 407s Get:215 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-tinytex all 0.56-1 [148 kB] 407s Get:216 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-modernizr all 3.13.0-0.1 [101 kB] 407s Get:217 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 407s Get:218 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-rcpp arm64 1.0.14-1 [1978 kB] 407s Get:219 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-later arm64 1.4.1+dfsg-1 [141 kB] 407s Get:220 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-magrittr arm64 2.0.3-1 [154 kB] 407s Get:221 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-promises arm64 1.3.2+dfsg-1 [290 kB] 407s Get:222 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-httpuv arm64 1.6.15+dfsg-1 [489 kB] 407s Get:223 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-xtable all 1:1.8-4-2 [689 kB] 408s Get:224 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-sourcetools arm64 0.1.7-1-1 [47.2 kB] 408s Get:225 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-withr all 3.0.2+dfsg-1 [214 kB] 408s Get:226 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-commonmark arm64 1.9.5-1 [130 kB] 408s Get:227 http://ftpmaster.internal/ubuntu questing/universe arm64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 408s Get:228 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 408s Get:229 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 408s Get:230 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-bookdown all 0.42+dfsg-1 [1409 kB] 408s Get:231 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 408s Get:232 http://ftpmaster.internal/ubuntu questing/universe arm64 tex-common all 6.19 [29.8 kB] 408s Get:233 http://ftpmaster.internal/ubuntu questing/main arm64 t1utils arm64 1.41-4build3 [61.0 kB] 408s Get:234 http://ftpmaster.internal/ubuntu questing/universe arm64 texlive-binaries arm64 2024.20240313.70630+ds-6 [8349 kB] 409s Get:235 http://ftpmaster.internal/ubuntu questing/universe arm64 texlive-base all 2024.20250309-1 [22.7 MB] 410s Get:236 http://ftpmaster.internal/ubuntu questing/universe arm64 texlive-latex-base all 2024.20250309-1 [1276 kB] 410s Get:237 http://ftpmaster.internal/ubuntu questing/universe arm64 texlive-bibtex-extra all 2024.20250309-2 [79.3 MB] 423s Get:238 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-biocversion all 3.20.0-2 [11.1 kB] 423s Get:239 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-biocstyle all 2.34.0+dfsg-1 [451 kB] 423s Get:240 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-cran-lattice arm64 0.22-7-1 [1365 kB] 423s Get:241 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-matrix arm64 1.7-3-1 [4045 kB] 424s Get:242 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-matrixstats arm64 1.5.0-1 [496 kB] 424s Get:243 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 424s Get:244 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-abind all 1.4-8-1 [66.9 kB] 424s Get:245 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-s4arrays arm64 1.6.0+dfsg-2 [698 kB] 424s Get:246 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-bioc-sparsearray arm64 1.6.2+dfsg-2 [1369 kB] 424s Get:247 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-delayedarray arm64 0.32.0+dfsg-2 [2064 kB] 425s Get:248 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-genomicranges arm64 1.58.0+dfsg-2 [2083 kB] 425s Get:249 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 425s Get:250 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-bitops arm64 1.0-9-1 [30.2 kB] 425s Get:251 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-rhtslib arm64 3.2.0+dfsg-2 [1429 kB] 425s Get:252 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-rsamtools arm64 2.22.0+dfsg-2 [3668 kB] 426s Get:253 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-genomicalignments arm64 1.42.0-2 [2164 kB] 426s Get:254 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-xml arm64 3.99-0.18-1 [1745 kB] 427s Get:255 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-rcurl arm64 1.98-1.16+dfsg-1 [806 kB] 427s Get:256 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-rjson arm64 0.2.23-1 [104 kB] 427s Get:257 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-restfulr arm64 0.0.15-1 [380 kB] 427s Get:258 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 r-bioc-rtracklayer arm64 1.66.0-3 [5216 kB] 428s Get:259 http://ftpmaster.internal/ubuntu questing/universe arm64 r-bioc-genomicfeatures all 1.58.0+dfsg-2 [937 kB] 428s Get:260 http://ftpmaster.internal/ubuntu questing/universe arm64 r-cran-runit all 0.4.33-1 [377 kB] 428s Get:261 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 zstd arm64 1.5.7+dfsg-1 [607 kB] 431s Preconfiguring packages ... 432s Fetched 408 MB in 32s (12.8 MB/s) 433s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117821 files and directories currently installed.) 433s Preparing to unpack .../gcc-15-base_15.1.0-1ubuntu1_arm64.deb ... 433s Unpacking gcc-15-base:arm64 (15.1.0-1ubuntu1) over (15-20250404-0ubuntu1) ... 434s Setting up gcc-15-base:arm64 (15.1.0-1ubuntu1) ... 434s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117821 files and directories currently installed.) 434s Preparing to unpack .../libgcc-s1_15.1.0-1ubuntu1_arm64.deb ... 434s Unpacking libgcc-s1:arm64 (15.1.0-1ubuntu1) over (15-20250404-0ubuntu1) ... 435s Setting up libgcc-s1:arm64 (15.1.0-1ubuntu1) ... 435s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117821 files and directories currently installed.) 435s Preparing to unpack .../libatomic1_15.1.0-1ubuntu1_arm64.deb ... 435s Unpacking libatomic1:arm64 (15.1.0-1ubuntu1) over (15-20250404-0ubuntu1) ... 436s Preparing to unpack .../libstdc++6_15.1.0-1ubuntu1_arm64.deb ... 437s Unpacking libstdc++6:arm64 (15.1.0-1ubuntu1) over (15-20250404-0ubuntu1) ... 438s Setting up libstdc++6:arm64 (15.1.0-1ubuntu1) ... 438s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117821 files and directories currently installed.) 438s Preparing to unpack .../libzstd1_1.5.7+dfsg-1_arm64.deb ... 438s Unpacking libzstd1:arm64 (1.5.7+dfsg-1) over (1.5.6+dfsg-2) ... 438s Setting up libzstd1:arm64 (1.5.7+dfsg-1) ... 439s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117821 files and directories currently installed.) 439s Preparing to unpack .../000-gcc-14-base_14.2.0-22ubuntu1_arm64.deb ... 439s Unpacking gcc-14-base:arm64 (14.2.0-22ubuntu1) over (14.2.0-19ubuntu2) ... 440s Preparing to unpack .../001-libtirpc-common_1.3.6+ds-1_all.deb ... 440s Unpacking libtirpc-common (1.3.6+ds-1) over (1.3.4+ds-1.3) ... 440s Preparing to unpack .../002-libtirpc3t64_1.3.6+ds-1_arm64.deb ... 440s Unpacking libtirpc3t64:arm64 (1.3.6+ds-1) over (1.3.4+ds-1.3) ... 441s Selecting previously unselected package libisl23:arm64. 441s Preparing to unpack .../003-libisl23_0.27-1_arm64.deb ... 441s Unpacking libisl23:arm64 (0.27-1) ... 442s Selecting previously unselected package libmpc3:arm64. 442s Preparing to unpack .../004-libmpc3_1.3.1-1build2_arm64.deb ... 442s Unpacking libmpc3:arm64 (1.3.1-1build2) ... 442s Selecting previously unselected package cpp-14-aarch64-linux-gnu. 443s Preparing to unpack .../005-cpp-14-aarch64-linux-gnu_14.2.0-22ubuntu1_arm64.deb ... 443s Unpacking cpp-14-aarch64-linux-gnu (14.2.0-22ubuntu1) ... 443s Selecting previously unselected package cpp-14. 444s Preparing to unpack .../006-cpp-14_14.2.0-22ubuntu1_arm64.deb ... 444s Unpacking cpp-14 (14.2.0-22ubuntu1) ... 444s Selecting previously unselected package cpp-aarch64-linux-gnu. 445s Preparing to unpack .../007-cpp-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 445s Unpacking cpp-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 445s Selecting previously unselected package cpp. 446s Preparing to unpack .../008-cpp_4%3a14.2.0-1ubuntu1_arm64.deb ... 446s Unpacking cpp (4:14.2.0-1ubuntu1) ... 446s Selecting previously unselected package libcc1-0:arm64. 447s Preparing to unpack .../009-libcc1-0_15.1.0-1ubuntu1_arm64.deb ... 447s Unpacking libcc1-0:arm64 (15.1.0-1ubuntu1) ... 447s Selecting previously unselected package libgomp1:arm64. 448s Preparing to unpack .../010-libgomp1_15.1.0-1ubuntu1_arm64.deb ... 448s Unpacking libgomp1:arm64 (15.1.0-1ubuntu1) ... 448s Selecting previously unselected package libitm1:arm64. 449s Preparing to unpack .../011-libitm1_15.1.0-1ubuntu1_arm64.deb ... 449s Unpacking libitm1:arm64 (15.1.0-1ubuntu1) ... 449s Selecting previously unselected package libasan8:arm64. 450s Preparing to unpack .../012-libasan8_15.1.0-1ubuntu1_arm64.deb ... 450s Unpacking libasan8:arm64 (15.1.0-1ubuntu1) ... 450s Selecting previously unselected package liblsan0:arm64. 451s Preparing to unpack .../013-liblsan0_15.1.0-1ubuntu1_arm64.deb ... 451s Unpacking liblsan0:arm64 (15.1.0-1ubuntu1) ... 451s Selecting previously unselected package libtsan2:arm64. 453s Preparing to unpack .../014-libtsan2_15.1.0-1ubuntu1_arm64.deb ... 453s Unpacking libtsan2:arm64 (15.1.0-1ubuntu1) ... 453s Selecting previously unselected package libubsan1:arm64. 454s Preparing to unpack .../015-libubsan1_15.1.0-1ubuntu1_arm64.deb ... 454s Unpacking libubsan1:arm64 (15.1.0-1ubuntu1) ... 454s Selecting previously unselected package libhwasan0:arm64. 455s Preparing to unpack .../016-libhwasan0_15.1.0-1ubuntu1_arm64.deb ... 455s Unpacking libhwasan0:arm64 (15.1.0-1ubuntu1) ... 455s Selecting previously unselected package libgcc-14-dev:arm64. 456s Preparing to unpack .../017-libgcc-14-dev_14.2.0-22ubuntu1_arm64.deb ... 456s Unpacking libgcc-14-dev:arm64 (14.2.0-22ubuntu1) ... 456s Selecting previously unselected package gcc-14-aarch64-linux-gnu. 457s Preparing to unpack .../018-gcc-14-aarch64-linux-gnu_14.2.0-22ubuntu1_arm64.deb ... 457s Unpacking gcc-14-aarch64-linux-gnu (14.2.0-22ubuntu1) ... 457s Selecting previously unselected package gcc-14. 458s Preparing to unpack .../019-gcc-14_14.2.0-22ubuntu1_arm64.deb ... 458s Unpacking gcc-14 (14.2.0-22ubuntu1) ... 458s Selecting previously unselected package gcc-aarch64-linux-gnu. 459s Preparing to unpack .../020-gcc-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 459s Unpacking gcc-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 459s Selecting previously unselected package gcc. 460s Preparing to unpack .../021-gcc_4%3a14.2.0-1ubuntu1_arm64.deb ... 460s Unpacking gcc (4:14.2.0-1ubuntu1) ... 460s Selecting previously unselected package libstdc++-14-dev:arm64. 461s Preparing to unpack .../022-libstdc++-14-dev_14.2.0-22ubuntu1_arm64.deb ... 461s Unpacking libstdc++-14-dev:arm64 (14.2.0-22ubuntu1) ... 461s Selecting previously unselected package g++-14-aarch64-linux-gnu. 462s Preparing to unpack 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Unpacking dctrl-tools (2.24-3build3) ... 468s Selecting previously unselected package fonts-dejavu-mono. 469s Preparing to unpack .../029-fonts-dejavu-mono_2.37-8_all.deb ... 469s Unpacking fonts-dejavu-mono (2.37-8) ... 469s Selecting previously unselected package fonts-dejavu-core. 470s Preparing to unpack .../030-fonts-dejavu-core_2.37-8_all.deb ... 471s Unpacking fonts-dejavu-core (2.37-8) ... 471s Selecting previously unselected package fontconfig-config. 472s Preparing to unpack .../031-fontconfig-config_2.15.0-2.2ubuntu1_arm64.deb ... 473s Unpacking fontconfig-config (2.15.0-2.2ubuntu1) ... 473s Selecting previously unselected package libfontconfig1:arm64. 473s Preparing to unpack .../032-libfontconfig1_2.15.0-2.2ubuntu1_arm64.deb ... 473s Unpacking libfontconfig1:arm64 (2.15.0-2.2ubuntu1) ... 473s Selecting previously unselected package fontconfig. 474s Preparing to unpack .../033-fontconfig_2.15.0-2.2ubuntu1_arm64.deb ... 474s Unpacking fontconfig (2.15.0-2.2ubuntu1) ... 474s Selecting previously unselected package fonts-font-awesome. 475s Preparing to unpack .../034-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 475s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 475s Selecting previously unselected package fonts-glyphicons-halflings. 476s Preparing to unpack .../035-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-4_all.deb ... 476s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-4) ... 476s Selecting previously unselected package fonts-lmodern. 477s Preparing to unpack .../036-fonts-lmodern_2.005-1_all.deb ... 477s Unpacking fonts-lmodern (2.005-1) ... 477s Selecting previously unselected package fonts-mathjax. 477s Preparing to unpack .../037-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 477s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 478s Selecting previously unselected package libgfortran5:arm64. 478s Preparing to unpack .../038-libgfortran5_15.1.0-1ubuntu1_arm64.deb ... 478s Unpacking libgfortran5:arm64 (15.1.0-1ubuntu1) ... 479s Selecting previously unselected package libgfortran-14-dev:arm64. 479s Preparing to unpack .../039-libgfortran-14-dev_14.2.0-22ubuntu1_arm64.deb ... 479s Unpacking libgfortran-14-dev:arm64 (14.2.0-22ubuntu1) ... 479s Selecting previously unselected package gfortran-14-aarch64-linux-gnu. 480s Preparing to unpack .../040-gfortran-14-aarch64-linux-gnu_14.2.0-22ubuntu1_arm64.deb ... 480s Unpacking gfortran-14-aarch64-linux-gnu (14.2.0-22ubuntu1) ... 481s Selecting previously unselected package gfortran-14. 482s Preparing to unpack .../041-gfortran-14_14.2.0-22ubuntu1_arm64.deb ... 482s Unpacking gfortran-14 (14.2.0-22ubuntu1) ... 482s Selecting previously unselected package gfortran-aarch64-linux-gnu. 483s Preparing to unpack .../042-gfortran-aarch64-linux-gnu_4%3a14.2.0-1ubuntu1_arm64.deb ... 483s Unpacking gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 483s Selecting previously unselected package gfortran. 484s Preparing to unpack .../043-gfortran_4%3a14.2.0-1ubuntu1_arm64.deb ... 484s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 484s Selecting previously unselected package icu-devtools. 485s Preparing to unpack .../044-icu-devtools_76.1-1ubuntu2_arm64.deb ... 485s Unpacking icu-devtools (76.1-1ubuntu2) ... 485s Selecting previously unselected package javascript-common. 486s Preparing to unpack .../045-javascript-common_12_all.deb ... 486s Unpacking javascript-common (12) ... 487s Selecting previously unselected package libio-string-perl. 488s Preparing to unpack .../046-libio-string-perl_1.08-4_all.deb ... 488s Unpacking libio-string-perl (1.08-4) ... 488s Selecting previously unselected package liblatex-tounicode-perl. 489s Preparing to unpack .../047-liblatex-tounicode-perl_0.55-1_all.deb ... 489s Unpacking liblatex-tounicode-perl (0.55-1) ... 489s Selecting previously unselected package libbibtex-parser-perl. 489s Preparing to unpack .../048-libbibtex-parser-perl_1.05+dfsg-1_all.deb ... 489s Unpacking libbibtex-parser-perl (1.05+dfsg-1) ... 489s Selecting previously unselected package libblas3:arm64. 490s Preparing to unpack .../049-libblas3_3.12.1-2_arm64.deb ... 490s Unpacking libblas3:arm64 (3.12.1-2) ... 490s Selecting previously unselected package libblas-dev:arm64. 491s Preparing to unpack .../050-libblas-dev_3.12.1-2_arm64.deb ... 491s Unpacking libblas-dev:arm64 (3.12.1-2) ... 491s Selecting previously unselected package libboost1.83-dev:arm64. 491s Preparing to unpack .../051-libboost1.83-dev_1.83.0-4.2ubuntu1_arm64.deb ... 491s Unpacking libboost1.83-dev:arm64 (1.83.0-4.2ubuntu1) ... 494s Selecting previously unselected package libboost-dev:arm64. 495s Preparing to unpack .../052-libboost-dev_1.83.0.2ubuntu1_arm64.deb ... 495s Unpacking libboost-dev:arm64 (1.83.0.2ubuntu1) ... 495s Selecting previously unselected package libbz2-dev:arm64. 496s Preparing to unpack .../053-libbz2-dev_1.0.8-6_arm64.deb ... 496s Unpacking libbz2-dev:arm64 (1.0.8-6) ... 497s Selecting previously unselected package libpixman-1-0:arm64. 498s Preparing to unpack .../054-libpixman-1-0_0.44.0-3_arm64.deb ... 498s Unpacking libpixman-1-0:arm64 (0.44.0-3) ... 498s Selecting previously unselected package libxcb-render0:arm64. 499s Preparing to unpack .../055-libxcb-render0_1.17.0-2_arm64.deb ... 499s Unpacking libxcb-render0:arm64 (1.17.0-2) ... 499s Selecting previously unselected package libxcb-shm0:arm64. 502s Preparing to unpack .../056-libxcb-shm0_1.17.0-2_arm64.deb ... 502s Unpacking libxcb-shm0:arm64 (1.17.0-2) ... 502s Selecting previously unselected package libxrender1:arm64. 503s Preparing to unpack .../057-libxrender1_1%3a0.9.12-1_arm64.deb ... 503s Unpacking libxrender1:arm64 (1:0.9.12-1) ... 503s Selecting previously unselected package libcairo2:arm64. 505s Preparing to unpack .../058-libcairo2_1.18.4-1_arm64.deb ... 505s Unpacking libcairo2:arm64 (1.18.4-1) ... 505s Selecting previously unselected package libdatrie1:arm64. 507s Preparing to unpack .../059-libdatrie1_0.2.13-3build1_arm64.deb ... 507s Unpacking libdatrie1:arm64 (0.2.13-3build1) ... 507s Selecting previously unselected package libdeflate0:arm64. 508s Preparing to unpack .../060-libdeflate0_1.23-2_arm64.deb ... 508s Unpacking libdeflate0:arm64 (1.23-2) ... 508s Selecting previously unselected package libdeflate-dev:arm64. 509s Preparing to unpack .../061-libdeflate-dev_1.23-2_arm64.deb ... 509s Unpacking libdeflate-dev:arm64 (1.23-2) ... 509s Selecting previously unselected package libgraphite2-3:arm64. 511s Preparing to unpack .../062-libgraphite2-3_1.3.14-2ubuntu1_arm64.deb ... 511s Unpacking libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 511s Selecting previously unselected package libharfbuzz0b:arm64. 512s Preparing to unpack .../063-libharfbuzz0b_10.2.0-1_arm64.deb ... 512s Unpacking libharfbuzz0b:arm64 (10.2.0-1) ... 512s Selecting previously unselected package x11-common. 514s Preparing to unpack .../064-x11-common_1%3a7.7+23ubuntu4_all.deb ... 514s Unpacking x11-common (1:7.7+23ubuntu4) ... 514s Selecting previously unselected package libice6:arm64. 515s Preparing to unpack .../065-libice6_2%3a1.1.1-1_arm64.deb ... 515s Unpacking libice6:arm64 (2:1.1.1-1) ... 515s Selecting previously unselected package libicu-dev:arm64. 516s Preparing to unpack .../066-libicu-dev_76.1-1ubuntu2_arm64.deb ... 516s Unpacking libicu-dev:arm64 (76.1-1ubuntu2) ... 517s Selecting previously unselected package libjpeg-turbo8:arm64. 519s Preparing to unpack .../067-libjpeg-turbo8_2.1.5-3ubuntu2_arm64.deb ... 519s Unpacking libjpeg-turbo8:arm64 (2.1.5-3ubuntu2) ... 519s Selecting previously unselected package libjpeg-turbo8-dev:arm64. 522s Preparing to unpack .../068-libjpeg-turbo8-dev_2.1.5-3ubuntu2_arm64.deb ... 522s Unpacking libjpeg-turbo8-dev:arm64 (2.1.5-3ubuntu2) ... 522s Selecting previously unselected package libjpeg8:arm64. 523s Preparing to unpack .../069-libjpeg8_8c-2ubuntu11_arm64.deb ... 523s Unpacking libjpeg8:arm64 (8c-2ubuntu11) ... 523s Selecting previously unselected package libjpeg8-dev:arm64. 525s 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libjs-d3 (3.5.17-4) ... 534s Selecting previously unselected package libjs-es5-shim. 535s Preparing to unpack .../076-libjs-es5-shim_4.6.7-2_all.deb ... 535s Unpacking libjs-es5-shim (4.6.7-2) ... 535s Selecting previously unselected package libjs-highlight.js. 536s Preparing to unpack .../077-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 536s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 536s Selecting previously unselected package libjs-jquery. 538s Preparing to unpack .../078-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 538s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 538s Selecting previously unselected package libjs-jquery-datatables. 539s Preparing to unpack .../079-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 539s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 539s Selecting previously unselected package libjs-sifter.js. 541s Preparing to unpack .../080-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 541s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 541s Selecting previously unselected package libjs-microplugin.js. 542s Preparing to unpack .../081-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 542s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 542s Selecting previously unselected package libjs-jquery-selectize.js. 544s Preparing to unpack .../082-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 544s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 544s Selecting previously unselected package libjs-jquery-ui. 546s Preparing to unpack .../083-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 546s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 546s Selecting previously unselected package libjs-json. 547s Preparing to unpack .../084-libjs-json_0~20221030+~1.0.8-1_all.deb ... 547s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 547s Selecting previously unselected package libjs-lunr. 549s Preparing to unpack .../085-libjs-lunr_2.3.9~dfsg-2_all.deb ... 549s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 549s Selecting previously unselected package libjs-prettify. 551s Preparing to unpack .../086-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 551s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 551s Selecting previously unselected package libkpathsea6:arm64. 553s Preparing to unpack .../087-libkpathsea6_2024.20240313.70630+ds-6_arm64.deb ... 553s Unpacking libkpathsea6:arm64 (2024.20240313.70630+ds-6) ... 553s Selecting previously unselected package liblapack3:arm64. 555s Preparing to unpack .../088-liblapack3_3.12.1-2_arm64.deb ... 555s Unpacking liblapack3:arm64 (3.12.1-2) ... 555s Selecting previously unselected package liblapack-dev:arm64. 557s Preparing to unpack .../089-liblapack-dev_3.12.1-2_arm64.deb ... 557s Unpacking liblapack-dev:arm64 (3.12.1-2) ... 557s Selecting previously unselected package liblerc4:arm64. 560s Preparing to unpack .../090-liblerc4_4.0.0+ds-5ubuntu1_arm64.deb ... 560s Unpacking liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 560s Selecting previously unselected package liblua5.4-0:arm64. 562s Preparing to unpack .../091-liblua5.4-0_5.4.7-1_arm64.deb ... 562s Unpacking liblua5.4-0:arm64 (5.4.7-1) ... 562s Selecting previously unselected package libmpfi0:arm64. 563s Preparing to unpack .../092-libmpfi0_1.5.4+ds-4_arm64.deb ... 563s Unpacking libmpfi0:arm64 (1.5.4+ds-4) ... 563s Selecting previously unselected package libncurses-dev:arm64. 565s Preparing to unpack .../093-libncurses-dev_6.5+20250216-2_arm64.deb ... 565s Unpacking libncurses-dev:arm64 (6.5+20250216-2) ... 565s Selecting previously unselected package libthai-data. 566s Preparing to unpack .../094-libthai-data_0.1.29-2build1_all.deb ... 566s Unpacking libthai-data (0.1.29-2build1) ... 566s Selecting previously unselected package libthai0:arm64. 567s Preparing to unpack .../095-libthai0_0.1.29-2build1_arm64.deb ... 567s Unpacking libthai0:arm64 (0.1.29-2build1) ... 568s Selecting previously unselected package libpango-1.0-0:arm64. 569s Preparing to unpack .../096-libpango-1.0-0_1.56.3-1_arm64.deb ... 569s Unpacking libpango-1.0-0:arm64 (1.56.3-1) ... 569s Selecting previously unselected package libpangoft2-1.0-0:arm64. 571s Preparing to unpack .../097-libpangoft2-1.0-0_1.56.3-1_arm64.deb ... 571s Unpacking libpangoft2-1.0-0:arm64 (1.56.3-1) ... 571s Selecting previously unselected package libpangocairo-1.0-0:arm64. 573s Preparing to unpack .../098-libpangocairo-1.0-0_1.56.3-1_arm64.deb ... 573s Unpacking libpangocairo-1.0-0:arm64 (1.56.3-1) ... 573s Selecting previously unselected package libpaper2:arm64. 574s Preparing to unpack .../099-libpaper2_2.2.5-0.3_arm64.deb ... 574s Unpacking libpaper2:arm64 (2.2.5-0.3) ... 574s Selecting previously unselected package libpaper-utils. 576s Preparing to unpack .../100-libpaper-utils_2.2.5-0.3_arm64.deb ... 576s Unpacking libpaper-utils (2.2.5-0.3) ... 576s Selecting previously unselected package libpcre2-16-0:arm64. 578s Preparing to unpack .../101-libpcre2-16-0_10.45-1_arm64.deb ... 578s Unpacking libpcre2-16-0:arm64 (10.45-1) ... 578s Selecting previously unselected package libpcre2-32-0:arm64. 579s Preparing to unpack .../102-libpcre2-32-0_10.45-1_arm64.deb ... 579s Unpacking libpcre2-32-0:arm64 (10.45-1) ... 579s Selecting previously unselected package libpcre2-posix3:arm64. 580s Preparing to unpack .../103-libpcre2-posix3_10.45-1_arm64.deb ... 580s Unpacking libpcre2-posix3:arm64 (10.45-1) ... 580s Selecting previously unselected package libpcre2-dev:arm64. 581s Preparing to unpack .../104-libpcre2-dev_10.45-1_arm64.deb ... 581s Unpacking libpcre2-dev:arm64 (10.45-1) ... 581s Selecting previously unselected package libpkgconf3:arm64. 582s Preparing to unpack .../105-libpkgconf3_1.8.1-4_arm64.deb ... 582s Unpacking libpkgconf3:arm64 (1.8.1-4) ... 582s Selecting previously unselected package zlib1g-dev:arm64. 584s Preparing to unpack .../106-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_arm64.deb ... 584s Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 584s Selecting previously unselected package libpng-dev:arm64. 586s Preparing to unpack .../107-libpng-dev_1.6.47-1.1_arm64.deb ... 586s Unpacking libpng-dev:arm64 (1.6.47-1.1) ... 586s Selecting previously unselected package libpotrace0:arm64. 587s Preparing to unpack .../108-libpotrace0_1.16-2build1_arm64.deb ... 587s Unpacking libpotrace0:arm64 (1.16-2build1) ... 587s Selecting previously unselected package libptexenc1:arm64. 589s Preparing to unpack .../109-libptexenc1_2024.20240313.70630+ds-6_arm64.deb ... 589s Unpacking libptexenc1:arm64 (2024.20240313.70630+ds-6) ... 589s Selecting previously unselected package libreadline-dev:arm64. 591s Preparing to unpack .../110-libreadline-dev_8.2-6_arm64.deb ... 591s Unpacking libreadline-dev:arm64 (8.2-6) ... 591s Selecting previously unselected package libsharpyuv0:arm64. 593s Preparing to unpack .../111-libsharpyuv0_1.5.0-0.1_arm64.deb ... 593s Unpacking libsharpyuv0:arm64 (1.5.0-0.1) ... 593s Selecting previously unselected package libsm6:arm64. 594s Preparing to unpack .../112-libsm6_2%3a1.2.6-1_arm64.deb ... 594s Unpacking libsm6:arm64 (2:1.2.6-1) ... 594s Selecting previously unselected package libsynctex2:arm64. 595s Preparing to unpack .../113-libsynctex2_2024.20240313.70630+ds-6_arm64.deb ... 595s Unpacking libsynctex2:arm64 (2024.20240313.70630+ds-6) ... 595s Selecting previously unselected package libtcl8.6:arm64. 597s Preparing to unpack .../114-libtcl8.6_8.6.16+dfsg-1_arm64.deb ... 597s Unpacking libtcl8.6:arm64 (8.6.16+dfsg-1) ... 597s Selecting previously unselected package libteckit0:arm64. 598s Preparing to unpack .../115-libteckit0_2.5.12+ds1-1_arm64.deb ... 598s Unpacking libteckit0:arm64 (2.5.12+ds1-1) ... 598s Selecting previously unselected package libtexlua53-5:arm64. 601s Preparing to unpack .../116-libtexlua53-5_2024.20240313.70630+ds-6_arm64.deb ... 601s Unpacking libtexlua53-5:arm64 (2024.20240313.70630+ds-6) ... 601s Selecting previously unselected package libjbig0:arm64. 602s Preparing to unpack .../117-libjbig0_2.1-6.1ubuntu2_arm64.deb ... 602s Unpacking libjbig0:arm64 (2.1-6.1ubuntu2) ... 602s Selecting previously unselected package libwebp7:arm64. 604s Preparing to unpack .../118-libwebp7_1.5.0-0.1_arm64.deb ... 604s Unpacking libwebp7:arm64 (1.5.0-0.1) ... 604s Selecting previously unselected package libtiff6:arm64. 605s Preparing to unpack .../119-libtiff6_4.7.0-3ubuntu1_arm64.deb ... 605s Unpacking libtiff6:arm64 (4.7.0-3ubuntu1) ... 606s Selecting previously unselected package libxft2:arm64. 606s Preparing to unpack .../120-libxft2_2.3.6-1build1_arm64.deb ... 606s Unpacking libxft2:arm64 (2.3.6-1build1) ... 607s Selecting previously unselected package libxss1:arm64. 607s Preparing to unpack .../121-libxss1_1%3a1.2.3-1build3_arm64.deb ... 607s Unpacking libxss1:arm64 (1:1.2.3-1build3) ... 608s Selecting previously unselected package libtk8.6:arm64. 609s Preparing to unpack .../122-libtk8.6_8.6.16-1_arm64.deb ... 609s Unpacking libtk8.6:arm64 (8.6.16-1) ... 609s Selecting previously unselected package libxt6t64:arm64. 610s Preparing to unpack .../123-libxt6t64_1%3a1.2.1-1.2build1_arm64.deb ... 610s Unpacking libxt6t64:arm64 (1:1.2.1-1.2build1) ... 610s Selecting previously unselected package libxmu6:arm64. 611s Preparing to unpack .../124-libxmu6_2%3a1.1.3-3build2_arm64.deb ... 611s Unpacking libxmu6:arm64 (2:1.1.3-3build2) ... 611s Selecting previously unselected package libxpm4:arm64. 612s Preparing to unpack .../125-libxpm4_1%3a3.5.17-1build2_arm64.deb ... 612s Unpacking libxpm4:arm64 (1:3.5.17-1build2) ... 612s Selecting previously unselected package libxaw7:arm64. 613s Preparing to unpack .../126-libxaw7_2%3a1.0.16-1_arm64.deb ... 613s Unpacking libxaw7:arm64 (2:1.0.16-1) ... 613s Selecting previously unselected package libxi6:arm64. 614s Preparing to unpack .../127-libxi6_2%3a1.8.2-1_arm64.deb ... 614s Unpacking libxi6:arm64 (2:1.8.2-1) ... 614s Selecting previously unselected package libzstd-dev:arm64. 615s Preparing to unpack .../128-libzstd-dev_1.5.7+dfsg-1_arm64.deb ... 615s Unpacking libzstd-dev:arm64 (1.5.7+dfsg-1) ... 615s Selecting previously unselected package libzzip-0-13t64:arm64. 616s Preparing to unpack .../129-libzzip-0-13t64_0.13.78+dfsg.1-0.1_arm64.deb ... 616s Unpacking libzzip-0-13t64:arm64 (0.13.78+dfsg.1-0.1) ... 616s Selecting previously unselected package zip. 617s Preparing to unpack .../130-zip_3.0-14ubuntu2_arm64.deb ... 617s Unpacking zip (3.0-14ubuntu2) ... 617s Selecting previously unselected package unzip. 620s Preparing to unpack .../131-unzip_6.0-28ubuntu6_arm64.deb ... 620s Unpacking unzip (6.0-28ubuntu6) ... 620s Selecting previously unselected package xdg-utils. 623s Preparing to unpack .../132-xdg-utils_1.2.1-2ubuntu1_all.deb ... 623s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 623s Selecting previously unselected package r-base-core. 625s Preparing to unpack .../133-r-base-core_4.5.0-3_arm64.deb ... 625s Unpacking r-base-core (4.5.0-3) ... 626s Selecting previously unselected package r-cran-littler. 627s Preparing to unpack .../134-r-cran-littler_0.3.21-1_arm64.deb ... 627s Unpacking r-cran-littler (0.3.21-1) ... 627s Selecting previously unselected package littler. 628s Preparing to unpack .../135-littler_0.3.21-1_all.deb ... 628s Unpacking littler (0.3.21-1) ... 628s Selecting previously unselected package node-bootstrap-sass. 629s Preparing to unpack .../136-node-bootstrap-sass_3.4.3-2_all.deb ... 629s Unpacking node-bootstrap-sass (3.4.3-2) ... 629s Selecting previously unselected package node-html5shiv. 630s Preparing to unpack .../137-node-html5shiv_3.7.3+dfsg-5_all.deb ... 630s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 630s Selecting previously unselected package node-normalize.css. 631s Preparing to unpack .../138-node-normalize.css_8.0.1-5_all.deb ... 631s Unpacking node-normalize.css (8.0.1-5) ... 631s Selecting previously unselected package pandoc-data. 632s Preparing to unpack .../139-pandoc-data_3.1.11.1-3build1_all.deb ... 632s Unpacking pandoc-data (3.1.11.1-3build1) ... 632s Selecting previously unselected package pandoc. 633s Preparing to unpack .../140-pandoc_3.1.11.1+ds-2_arm64.deb ... 633s Unpacking pandoc (3.1.11.1+ds-2) ... 634s Selecting previously unselected package liblzma-dev:arm64. 635s Preparing to unpack .../141-liblzma-dev_5.6.4-1ubuntu1_arm64.deb ... 635s Unpacking liblzma-dev:arm64 (5.6.4-1ubuntu1) ... 635s Selecting previously unselected package pkgconf-bin. 636s Preparing to unpack .../142-pkgconf-bin_1.8.1-4_arm64.deb ... 636s Unpacking pkgconf-bin (1.8.1-4) ... 637s Selecting previously unselected package pkgconf:arm64. 637s Preparing to unpack .../143-pkgconf_1.8.1-4_arm64.deb ... 637s Unpacking pkgconf:arm64 (1.8.1-4) ... 637s Selecting previously unselected package libtirpc-dev:arm64. 638s Preparing to unpack .../144-libtirpc-dev_1.3.6+ds-1_arm64.deb ... 638s Unpacking libtirpc-dev:arm64 (1.3.6+ds-1) ... 638s Selecting previously unselected package r-base-dev. 640s Preparing to unpack .../145-r-base-dev_4.5.0-3_all.deb ... 640s Unpacking r-base-dev (4.5.0-3) ... 641s Selecting previously unselected package pkg-r-autopkgtest. 641s Preparing to unpack .../146-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 641s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 641s Selecting previously unselected package r-bioc-biocgenerics. 642s Preparing to unpack .../147-r-bioc-biocgenerics_0.52.0-2_all.deb ... 642s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 643s Selecting previously unselected package r-bioc-biobase. 644s Preparing to unpack .../148-r-bioc-biobase_2.66.0-2_arm64.deb ... 644s Unpacking r-bioc-biobase (2.66.0-2) ... 644s Selecting previously unselected package r-bioc-s4vectors. 645s Preparing to unpack .../149-r-bioc-s4vectors_0.44.0+dfsg-2_arm64.deb ... 645s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 645s Selecting previously unselected package r-bioc-iranges. 647s Preparing to unpack .../150-r-bioc-iranges_2.40.1-3_arm64.deb ... 647s Unpacking r-bioc-iranges (2.40.1-3) ... 647s Selecting previously unselected package r-cran-dbi. 648s Preparing to unpack .../151-r-cran-dbi_1.2.3-1_all.deb ... 648s Unpacking r-cran-dbi (1.2.3-1) ... 649s Selecting previously unselected package r-cran-bit. 650s Preparing to unpack .../152-r-cran-bit_4.6.0+dfsg-1_arm64.deb ... 650s Unpacking r-cran-bit (4.6.0+dfsg-1) ... 650s Selecting previously unselected package r-cran-bit64. 652s Preparing to unpack .../153-r-cran-bit64_4.6.0-1-1ubuntu2_arm64.deb ... 652s Unpacking r-cran-bit64 (4.6.0-1-1ubuntu2) ... 652s Selecting previously unselected package r-cran-rlang. 653s Preparing to unpack .../154-r-cran-rlang_1.1.5-3_arm64.deb ... 653s Unpacking r-cran-rlang (1.1.5-3) ... 653s Selecting previously unselected package r-cran-cli. 654s Preparing to unpack .../155-r-cran-cli_3.6.4-1_arm64.deb ... 654s Unpacking r-cran-cli (3.6.4-1) ... 655s Selecting previously unselected package r-cran-glue. 656s Preparing to unpack .../156-r-cran-glue_1.8.0-1_arm64.deb ... 656s Unpacking r-cran-glue (1.8.0-1) ... 656s Selecting previously unselected package r-cran-lifecycle. 657s Preparing to unpack .../157-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 657s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 658s Selecting previously unselected package r-cran-vctrs. 659s Preparing to unpack .../158-r-cran-vctrs_0.6.5-1_arm64.deb ... 659s Unpacking r-cran-vctrs (0.6.5-1) ... 659s Selecting previously unselected package r-cran-blob. 659s Preparing to unpack .../159-r-cran-blob_1.2.4-1_all.deb ... 659s Unpacking r-cran-blob (1.2.4-1) ... 660s Selecting previously unselected package r-cran-fastmap. 661s Preparing to unpack .../160-r-cran-fastmap_1.2.0-1_arm64.deb ... 661s Unpacking r-cran-fastmap (1.2.0-1) ... 661s Selecting previously unselected package r-cran-cachem. 663s Preparing to unpack .../161-r-cran-cachem_1.1.0-1_arm64.deb ... 663s Unpacking r-cran-cachem (1.1.0-1) ... 663s Selecting previously unselected package r-cran-memoise. 665s Preparing to unpack .../162-r-cran-memoise_2.0.1-1_all.deb ... 665s Unpacking r-cran-memoise (2.0.1-1) ... 665s Selecting previously unselected package r-cran-pkgconfig. 667s Preparing to unpack .../163-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 667s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 667s Selecting previously unselected package r-cran-plogr. 669s Preparing to unpack .../164-r-cran-plogr_0.2.0-3build1_all.deb ... 669s Unpacking r-cran-plogr (0.2.0-3build1) ... 670s Selecting previously unselected package r-cran-cpp11. 672s Preparing to unpack .../165-r-cran-cpp11_0.5.2-1_all.deb ... 672s Unpacking r-cran-cpp11 (0.5.2-1) ... 672s Selecting previously unselected package r-cran-rsqlite. 675s Preparing to unpack .../166-r-cran-rsqlite_2.3.9-1_arm64.deb ... 675s Unpacking r-cran-rsqlite (2.3.9-1) ... 675s Selecting previously unselected package r-cran-curl. 678s Preparing to unpack .../167-r-cran-curl_6.2.1+dfsg-1ubuntu1_arm64.deb ... 678s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 678s Selecting previously unselected package r-cran-jsonlite. 680s Preparing to unpack .../168-r-cran-jsonlite_1.9.1+dfsg-1_arm64.deb ... 680s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 681s Selecting previously unselected package r-cran-mime. 683s Preparing to unpack .../169-r-cran-mime_0.12-2_arm64.deb ... 683s Unpacking r-cran-mime (0.12-2) ... 684s Selecting previously unselected package r-cran-sys. 686s Preparing to unpack .../170-r-cran-sys_3.4.3-1_arm64.deb ... 686s Unpacking r-cran-sys (3.4.3-1) ... 686s Selecting previously unselected package r-cran-askpass. 688s Preparing to unpack .../171-r-cran-askpass_1.2.1-1_arm64.deb ... 688s Unpacking r-cran-askpass (1.2.1-1) ... 689s Selecting previously unselected package r-cran-openssl. 690s Preparing to unpack .../172-r-cran-openssl_2.3.2+dfsg-1_arm64.deb ... 690s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 691s Selecting previously unselected package r-cran-r6. 693s Preparing to unpack .../173-r-cran-r6_2.6.1-1_all.deb ... 693s Unpacking r-cran-r6 (2.6.1-1) ... 693s Selecting previously unselected package r-cran-httr. 695s Preparing to unpack .../174-r-cran-httr_1.4.7+dfsg-1_all.deb ... 695s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 695s Selecting previously unselected package r-cran-png. 697s Preparing to unpack .../175-r-cran-png_0.1-8-1build2_arm64.deb ... 697s Unpacking r-cran-png (0.1-8-1build2) ... 697s Selecting previously unselected package r-bioc-zlibbioc. 699s Preparing to unpack .../176-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 699s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 699s Selecting previously unselected package r-bioc-xvector. 700s Preparing to unpack .../177-r-bioc-xvector_0.46.0-2_arm64.deb ... 700s Unpacking r-bioc-xvector (0.46.0-2) ... 701s Selecting previously unselected package r-bioc-ucsc.utils. 702s Preparing to unpack .../178-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 702s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 703s Selecting previously unselected package r-bioc-genomeinfodbdata. 704s Preparing to unpack .../179-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 704s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 705s Selecting previously unselected package r-bioc-genomeinfodb. 706s Preparing to unpack .../180-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 706s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 707s Selecting previously unselected package r-cran-crayon. 709s Preparing to unpack .../181-r-cran-crayon_1.5.3-1_all.deb ... 709s Unpacking r-cran-crayon (1.5.3-1) ... 709s Selecting previously unselected package r-bioc-biostrings. 711s Preparing to unpack .../182-r-bioc-biostrings_2.74.1+dfsg-2_arm64.deb ... 711s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 712s Selecting previously unselected package r-bioc-keggrest. 714s Preparing to unpack .../183-r-bioc-keggrest_1.46.0+dfsg-3_all.deb ... 714s Unpacking r-bioc-keggrest (1.46.0+dfsg-3) ... 714s Selecting previously unselected package r-bioc-annotationdbi. 716s Preparing to unpack .../184-r-bioc-annotationdbi_1.68.0-2_all.deb ... 716s Unpacking r-bioc-annotationdbi (1.68.0-2) ... 717s Selecting previously unselected package r-bioc-biocio. 719s Preparing to unpack .../185-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 719s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 719s Selecting previously unselected package r-cran-formatr. 721s Preparing to unpack .../186-r-cran-formatr_1.14-2_all.deb ... 721s Unpacking r-cran-formatr (1.14-2) ... 721s Selecting previously unselected package r-cran-lambda.r. 723s Preparing to unpack .../187-r-cran-lambda.r_1.2.4-2build1_all.deb ... 723s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 723s Selecting previously unselected package r-cran-futile.options. 725s Preparing to unpack .../188-r-cran-futile.options_1.0.1-3build1_all.deb ... 725s Unpacking r-cran-futile.options (1.0.1-3build1) ... 725s Selecting previously unselected package r-cran-futile.logger. 727s Preparing to unpack .../189-r-cran-futile.logger_1.4.3-4build1_all.deb ... 727s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 727s Selecting previously unselected package r-cran-snow. 729s Preparing to unpack .../190-r-cran-snow_1%3a0.4.4-2_all.deb ... 729s Unpacking r-cran-snow (1:0.4.4-2) ... 729s Selecting previously unselected package r-cran-codetools. 731s Preparing to unpack .../191-r-cran-codetools_0.2-20-1_all.deb ... 731s Unpacking r-cran-codetools (0.2-20-1) ... 731s Selecting previously unselected package r-cran-bh. 732s Preparing to unpack .../192-r-cran-bh_1.84.0-1_all.deb ... 732s Unpacking r-cran-bh (1.84.0-1) ... 733s Selecting previously unselected package r-bioc-biocparallel. 734s Preparing to unpack .../193-r-bioc-biocparallel_1.40.0-2_arm64.deb ... 734s Unpacking r-bioc-biocparallel (1.40.0-2) ... 734s Selecting previously unselected package r-cran-base64enc. 736s Preparing to unpack .../194-r-cran-base64enc_0.1-3-3_arm64.deb ... 736s Unpacking r-cran-base64enc (0.1-3-3) ... 736s Selecting previously unselected package r-cran-digest. 737s Preparing to unpack .../195-r-cran-digest_0.6.37-1_arm64.deb ... 737s Unpacking r-cran-digest (0.6.37-1) ... 737s Selecting previously unselected package r-cran-htmltools. 738s Preparing to unpack .../196-r-cran-htmltools_0.5.8.1-1_arm64.deb ... 738s Unpacking r-cran-htmltools (0.5.8.1-1) ... 739s Selecting previously unselected package r-cran-evaluate. 740s Preparing to unpack .../197-r-cran-evaluate_1.0.3-1_all.deb ... 740s Unpacking r-cran-evaluate (1.0.3-1) ... 740s Selecting previously unselected package r-cran-xfun. 742s Preparing to unpack .../198-r-cran-xfun_0.51+dfsg-1_arm64.deb ... 742s Unpacking r-cran-xfun (0.51+dfsg-1) ... 742s Selecting previously unselected package r-cran-highr. 743s Preparing to unpack .../199-r-cran-highr_0.11+dfsg-1_all.deb ... 743s Unpacking r-cran-highr (0.11+dfsg-1) ... 743s Selecting previously unselected package r-cran-yaml. 744s Preparing to unpack .../200-r-cran-yaml_2.3.10-1_arm64.deb ... 744s Unpacking r-cran-yaml (2.3.10-1) ... 745s Selecting previously unselected package libjs-mathjax. 746s Preparing to unpack .../201-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 746s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 748s Selecting previously unselected package r-cran-knitr. 749s Preparing to unpack .../202-r-cran-knitr_1.50+dfsg-1_all.deb ... 749s Unpacking r-cran-knitr (1.50+dfsg-1) ... 749s Selecting previously unselected package r-cran-jquerylib. 751s Preparing to unpack .../203-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 751s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 751s Selecting previously unselected package r-cran-fs. 752s Preparing to unpack .../204-r-cran-fs_1.6.5+dfsg-1_arm64.deb ... 752s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 752s Selecting previously unselected package r-cran-rappdirs. 753s Preparing to unpack .../205-r-cran-rappdirs_0.3.3-1_arm64.deb ... 753s Unpacking r-cran-rappdirs (0.3.3-1) ... 753s Selecting previously unselected package r-cran-sass. 754s Preparing to unpack .../206-r-cran-sass_0.4.9+dfsg-1_arm64.deb ... 754s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 754s Selecting previously unselected package r-cran-bslib. 756s Preparing to unpack .../207-r-cran-bslib_0.9.0+dfsg-3_all.deb ... 756s Unpacking r-cran-bslib (0.9.0+dfsg-3) ... 756s Selecting previously unselected package r-cran-fontawesome. 758s Preparing to unpack .../208-r-cran-fontawesome_0.5.3-1_all.deb ... 758s Unpacking r-cran-fontawesome (0.5.3-1) ... 758s Selecting previously unselected package r-cran-tinytex. 759s Preparing to unpack .../209-r-cran-tinytex_0.56-1_all.deb ... 759s Unpacking r-cran-tinytex (0.56-1) ... 759s Selecting previously unselected package libjs-modernizr. 761s Preparing to unpack .../210-libjs-modernizr_3.13.0-0.1_all.deb ... 761s Unpacking libjs-modernizr (3.13.0-0.1) ... 761s Selecting previously unselected package r-cran-pkgkitten. 762s Preparing to unpack .../211-r-cran-pkgkitten_0.2.4-1_all.deb ... 762s Unpacking r-cran-pkgkitten (0.2.4-1) ... 762s Selecting previously unselected package r-cran-rcpp. 763s Preparing to unpack .../212-r-cran-rcpp_1.0.14-1_arm64.deb ... 763s Unpacking r-cran-rcpp (1.0.14-1) ... 764s Selecting previously unselected package r-cran-later. 765s Preparing to unpack .../213-r-cran-later_1.4.1+dfsg-1_arm64.deb ... 765s Unpacking r-cran-later (1.4.1+dfsg-1) ... 765s Selecting previously unselected package r-cran-magrittr. 766s Preparing to unpack .../214-r-cran-magrittr_2.0.3-1_arm64.deb ... 766s Unpacking r-cran-magrittr (2.0.3-1) ... 766s Selecting previously unselected package r-cran-promises. 767s Preparing to unpack .../215-r-cran-promises_1.3.2+dfsg-1_arm64.deb ... 767s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 767s Selecting previously unselected package r-cran-httpuv. 769s Preparing to unpack .../216-r-cran-httpuv_1.6.15+dfsg-1_arm64.deb ... 769s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 769s Selecting previously unselected package r-cran-xtable. 770s Preparing to unpack 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.../222-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 777s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 777s Selecting previously unselected package r-cran-rmarkdown. 779s Preparing to unpack .../223-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 779s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 779s Selecting previously unselected package r-cran-bookdown. 780s Preparing to unpack .../224-r-cran-bookdown_0.42+dfsg-1_all.deb ... 780s Unpacking r-cran-bookdown (0.42+dfsg-1) ... 781s Selecting previously unselected package r-cran-biocmanager. 782s Preparing to unpack .../225-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 782s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 782s Selecting previously unselected package tex-common. 783s Preparing to unpack .../226-tex-common_6.19_all.deb ... 783s Unpacking tex-common (6.19) ... 784s Selecting previously unselected package t1utils. 785s Preparing to unpack .../227-t1utils_1.41-4build3_arm64.deb ... 785s Unpacking t1utils (1.41-4build3) ... 785s Selecting previously unselected package texlive-binaries. 787s Preparing to unpack .../228-texlive-binaries_2024.20240313.70630+ds-6_arm64.deb ... 787s Unpacking texlive-binaries (2024.20240313.70630+ds-6) ... 788s Selecting previously unselected package texlive-base. 789s Preparing to unpack .../229-texlive-base_2024.20250309-1_all.deb ... 789s Unpacking texlive-base (2024.20250309-1) ... 792s Selecting previously unselected package texlive-latex-base. 794s Preparing to unpack .../230-texlive-latex-base_2024.20250309-1_all.deb ... 794s Unpacking texlive-latex-base (2024.20250309-1) ... 795s Selecting previously unselected package texlive-bibtex-extra. 798s Preparing to unpack .../231-texlive-bibtex-extra_2024.20250309-2_all.deb ... 798s Unpacking texlive-bibtex-extra (2024.20250309-2) ... 802s Selecting previously unselected package r-bioc-biocversion. 804s Preparing to unpack .../232-r-bioc-biocversion_3.20.0-2_all.deb ... 804s Unpacking r-bioc-biocversion (3.20.0-2) ... 804s Selecting previously unselected package r-bioc-biocstyle. 807s Preparing to unpack .../233-r-bioc-biocstyle_2.34.0+dfsg-1_all.deb ... 807s Unpacking r-bioc-biocstyle (2.34.0+dfsg-1) ... 807s Selecting previously unselected package r-cran-lattice. 809s Preparing to unpack .../234-r-cran-lattice_0.22-7-1_arm64.deb ... 809s Unpacking r-cran-lattice (0.22-7-1) ... 809s Selecting previously unselected package r-cran-matrix. 811s Preparing to unpack .../235-r-cran-matrix_1.7-3-1_arm64.deb ... 811s Unpacking r-cran-matrix (1.7-3-1) ... 812s Selecting previously unselected package r-cran-matrixstats. 814s Preparing to unpack .../236-r-cran-matrixstats_1.5.0-1_arm64.deb ... 814s Unpacking r-cran-matrixstats (1.5.0-1) ... 815s Selecting previously unselected package r-bioc-matrixgenerics. 819s Preparing to unpack .../237-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 819s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 819s Selecting previously unselected package r-cran-abind. 823s Preparing to unpack .../238-r-cran-abind_1.4-8-1_all.deb ... 823s Unpacking r-cran-abind (1.4-8-1) ... 823s Selecting previously unselected package r-bioc-s4arrays. 827s Preparing to unpack .../239-r-bioc-s4arrays_1.6.0+dfsg-2_arm64.deb ... 827s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 828s Selecting previously unselected package r-bioc-sparsearray. 831s Preparing to unpack .../240-r-bioc-sparsearray_1.6.2+dfsg-2_arm64.deb ... 831s Unpacking r-bioc-sparsearray (1.6.2+dfsg-2) ... 831s Selecting previously unselected package r-bioc-delayedarray. 834s Preparing to unpack .../241-r-bioc-delayedarray_0.32.0+dfsg-2_arm64.deb ... 834s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 835s Selecting previously unselected package r-bioc-genomicranges. 838s Preparing to unpack .../242-r-bioc-genomicranges_1.58.0+dfsg-2_arm64.deb ... 838s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 838s Selecting previously unselected package r-bioc-summarizedexperiment. 841s Preparing to unpack .../243-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 841s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 841s Selecting previously unselected package r-cran-bitops. 844s Preparing to unpack .../244-r-cran-bitops_1.0-9-1_arm64.deb ... 844s Unpacking r-cran-bitops (1.0-9-1) ... 845s Selecting previously unselected package r-bioc-rhtslib. 847s Preparing to unpack .../245-r-bioc-rhtslib_3.2.0+dfsg-2_arm64.deb ... 847s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 848s Selecting previously unselected package r-bioc-rsamtools. 851s Preparing to unpack .../246-r-bioc-rsamtools_2.22.0+dfsg-2_arm64.deb ... 851s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 851s Selecting previously unselected package r-bioc-genomicalignments. 854s Preparing to unpack .../247-r-bioc-genomicalignments_1.42.0-2_arm64.deb ... 854s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 855s Selecting previously unselected package r-cran-xml. 857s Preparing to unpack .../248-r-cran-xml_3.99-0.18-1_arm64.deb ... 857s Unpacking r-cran-xml (3.99-0.18-1) ... 858s Selecting previously unselected package r-cran-rcurl. 861s Preparing to unpack .../249-r-cran-rcurl_1.98-1.16+dfsg-1_arm64.deb ... 861s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 861s Selecting previously unselected package r-cran-rjson. 865s Preparing to unpack .../250-r-cran-rjson_0.2.23-1_arm64.deb ... 865s Unpacking r-cran-rjson (0.2.23-1) ... 865s Selecting previously unselected package r-cran-restfulr. 868s Preparing to unpack .../251-r-cran-restfulr_0.0.15-1_arm64.deb ... 868s Unpacking r-cran-restfulr (0.0.15-1) ... 869s Selecting previously unselected package r-bioc-rtracklayer. 871s Preparing to unpack .../252-r-bioc-rtracklayer_1.66.0-3_arm64.deb ... 871s Unpacking r-bioc-rtracklayer (1.66.0-3) ... 872s Selecting previously unselected package r-bioc-genomicfeatures. 874s Preparing to unpack .../253-r-bioc-genomicfeatures_1.58.0+dfsg-2_all.deb ... 874s Unpacking r-bioc-genomicfeatures (1.58.0+dfsg-2) ... 875s Selecting previously unselected package r-cran-runit. 877s Preparing to unpack .../254-r-cran-runit_0.4.33-1_all.deb ... 877s Unpacking r-cran-runit (0.4.33-1) ... 881s Preparing to unpack .../255-zstd_1.5.7+dfsg-1_arm64.deb ... 881s Unpacking zstd (1.5.7+dfsg-1) over (1.5.6+dfsg-2) ... 882s Setting up libjs-json (0~20221030+~1.0.8-1) ... 882s Setting up javascript-common (12) ... 882s Setting up libgraphite2-3:arm64 (1.3.14-2ubuntu1) ... 882s Setting up libpixman-1-0:arm64 (0.44.0-3) ... 882s Setting up libsharpyuv0:arm64 (1.5.0-0.1) ... 882s Setting up libncurses-dev:arm64 (6.5+20250216-2) ... 882s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 882s Setting up liblerc4:arm64 (4.0.0+ds-5ubuntu1) ... 882s Setting up libzstd-dev:arm64 (1.5.7+dfsg-1) ... 882s Setting up libxpm4:arm64 (1:3.5.17-1build2) ... 883s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 883s Setting up libxi6:arm64 (2:1.8.2-1) ... 883s Setting up libxrender1:arm64 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r-cran-formatr (1.14-2) ... 898s Setting up r-cran-xml (3.99-0.18-1) ... 898s Setting up texlive-binaries (2024.20240313.70630+ds-6) ... 898s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode 898s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode 898s Setting up gfortran-14-aarch64-linux-gnu (14.2.0-22ubuntu1) ... 898s Setting up g++-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 898s Setting up gfortran-aarch64-linux-gnu (4:14.2.0-1ubuntu1) ... 898s Setting up r-cran-commonmark (1.9.5-1) ... 898s Setting up g++-14 (14.2.0-22ubuntu1) ... 898s Setting up r-cran-rjson (0.2.23-1) ... 898s Setting up r-cran-r6 (2.6.1-1) ... 898s Setting up r-cran-pkgkitten (0.2.4-1) ... 898s Setting up gfortran-14 (14.2.0-22ubuntu1) ... 898s Setting up texlive-base (2024.20250309-1) ... 904s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps 905s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg 906s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper 907s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex 910s Setting up r-cran-magrittr (2.0.3-1) ... 910s Setting up r-cran-rappdirs (0.3.3-1) ... 910s Setting up r-bioc-genomeinfodbdata (1.2.13-2) ... 910s Setting up r-cran-littler (0.3.21-1) ... 910s Setting up r-cran-bh (1.84.0-1) ... 910s Setting up r-cran-fs (1.6.5+dfsg-1) ... 910s Setting up r-cran-rcpp (1.0.14-1) ... 910s Setting up r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 910s Setting up r-cran-codetools (0.2-20-1) ... 910s Setting up r-bioc-biocgenerics (0.52.0-2) ... 910s Setting up r-cran-rlang (1.1.5-3) ... 910s Setting up r-cran-matrixstats (1.5.0-1) ... 910s Setting up littler (0.3.21-1) ... 910s Setting up r-bioc-matrixgenerics (1.18.1-1) ... 910s Setting up r-cran-xfun (0.51+dfsg-1) ... 910s Setting up r-cran-sys (3.4.3-1) ... 910s Setting up r-cran-plogr (0.2.0-3build1) ... 910s Setting up r-cran-withr (3.0.2+dfsg-1) ... 910s Setting up r-cran-mime (0.12-2) ... 910s Setting up r-cran-base64enc (0.1-3-3) ... 910s Setting up r-cran-abind (1.4-8-1) ... 910s Setting up r-cran-digest (0.6.37-1) ... 910s Setting up r-cran-yaml (2.3.10-1) ... 910s Setting up r-cran-lambda.r (1.2.4-2build1) ... 910s Setting up r-cran-evaluate (1.0.3-1) ... 910s Setting up r-cran-dbi (1.2.3-1) ... 910s Setting up r-cran-highr (0.11+dfsg-1) ... 910s Setting up r-cran-snow (1:0.4.4-2) ... 910s Setting up r-cran-glue (1.8.0-1) ... 910s Setting up r-cran-bit (4.6.0+dfsg-1) ... 910s Setting up r-cran-xtable (1:1.8-4-2) ... 910s Setting up r-cran-cli (3.6.4-1) ... 910s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 910s Setting up r-cran-bitops (1.0-9-1) ... 910s Setting up r-bioc-biocversion (3.20.0-2) ... 910s Setting up r-cran-bit64 (4.6.0-1-1ubuntu2) ... 910s Setting up r-cran-biocmanager (1.30.25+dfsg-1) ... 910s Setting up gcc (4:14.2.0-1ubuntu1) ... 910s Setting up r-bioc-zlibbioc (1.52.0+dfsg-2) ... 910s Setting up r-cran-askpass (1.2.1-1) ... 910s Setting up r-cran-fastmap (1.2.0-1) ... 910s Setting up r-cran-png (0.1-8-1build2) ... 910s Setting up r-bioc-biobase (2.66.0-2) ... 910s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ... 910s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 910s Setting up texlive-latex-base (2024.20250309-1) ... 910s Setting up r-cran-cpp11 (0.5.2-1) ... 910s Setting up r-bioc-s4vectors (0.44.0+dfsg-2) ... 910s Setting up r-cran-runit (0.4.33-1) ... 910s Setting up r-cran-futile.logger (1.4.3-4build1) ... 910s Setting up r-cran-later (1.4.1+dfsg-1) ... 910s Setting up r-cran-matrix (1.7-3-1) ... 910s Setting up r-cran-htmltools (0.5.8.1-1) ... 910s Setting up r-cran-tinytex (0.56-1) ... 910s Setting up r-cran-knitr (1.50+dfsg-1) ... 910s Setting up g++ (4:14.2.0-1ubuntu1) ... 910s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 910s Setting up r-cran-cachem (1.1.0-1) ... 910s Setting up r-cran-sass (0.4.9+dfsg-1) ... 910s Setting up build-essential (12.12ubuntu1) ... 910s Setting up r-bioc-iranges (2.40.1-3) ... 910s Setting up r-cran-rcurl (1.98-1.16+dfsg-1) ... 910s Setting up r-cran-restfulr (0.0.15-1) ... 910s Setting up r-cran-vctrs (0.6.5-1) ... 910s Setting up r-cran-openssl (2.3.2+dfsg-1) ... 910s Setting up r-bioc-s4arrays (1.6.0+dfsg-2) ... 910s Setting up r-bioc-biocparallel (1.40.0-2) ... 910s Setting up r-bioc-rhtslib (3.2.0+dfsg-2) ... 910s Setting up r-cran-fontawesome (0.5.3-1) ... 910s Setting up r-bioc-biocio (1.16.0+dfsg-2) ... 910s Setting up gfortran (4:14.2.0-1ubuntu1) ... 910s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 910s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 910s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 910s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 910s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 910s Setting up texlive-bibtex-extra (2024.20250309-2) ... 910s Setting up r-cran-httr (1.4.7+dfsg-1) ... 910s Setting up r-cran-memoise (2.0.1-1) ... 910s Setting up r-cran-promises (1.3.2+dfsg-1) ... 910s Setting up r-cran-blob (1.2.4-1) ... 910s Setting up r-bioc-xvector (0.46.0-2) ... 910s Setting up r-cran-rsqlite (2.3.9-1) ... 910s Setting up r-base-dev (4.5.0-3) ... 910s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 910s Setting up r-bioc-sparsearray (1.6.2+dfsg-2) ... 910s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 910s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 910s Setting up r-cran-bslib (0.9.0+dfsg-3) ... 910s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 910s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 910s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 910s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 910s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 910s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 910s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 910s Setting up r-cran-bookdown (0.42+dfsg-1) ... 910s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 910s Setting up r-bioc-keggrest (1.46.0+dfsg-3) ... 910s Setting up r-bioc-annotationdbi (1.68.0-2) ... 910s Setting up r-bioc-biocstyle (2.34.0+dfsg-1) ... 910s Setting up r-bioc-genomicalignments (1.42.0-2) ... 910s Setting up r-bioc-rtracklayer (1.66.0-3) ... 910s Setting up r-bioc-genomicfeatures (1.58.0+dfsg-2) ... 910s Processing triggers for man-db (2.13.0-1) ... 915s Processing triggers for install-info (7.1.1-1) ... 915s Processing triggers for libc-bin (2.41-6ubuntu1) ... 916s Processing triggers for tex-common (6.19) ... 918s Running updmap-sys. This may take some time... done. 919s Running mktexlsr /var/lib/texmf ... done. 919s Building format(s) --all. 961s This may take some time... done. 963s autopkgtest [14:54:26]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 963s autopkgtest [14:54:26]: test pkg-r-autopkgtest: [----------------------- 963s Test: Try to load the R library IRanges 964s 964s R version 4.5.0 (2025-04-11) -- "How About a Twenty-Six" 964s Copyright (C) 2025 The R Foundation for Statistical Computing 964s Platform: aarch64-unknown-linux-gnu 964s 964s R is free software and comes with ABSOLUTELY NO WARRANTY. 964s You are welcome to redistribute it under certain conditions. 964s Type 'license()' or 'licence()' for distribution details. 964s 964s R is a collaborative project with many contributors. 964s Type 'contributors()' for more information and 964s 'citation()' on how to cite R or R packages in publications. 964s 964s Type 'demo()' for some demos, 'help()' for on-line help, or 964s 'help.start()' for an HTML browser interface to help. 964s Type 'q()' to quit R. 964s 964s > library('IRanges') 964s Loading required package: BiocGenerics 965s 965s Attaching package: ‘BiocGenerics’ 965s 965s The following objects are masked from ‘package:stats’: 965s 965s IQR, mad, sd, var, xtabs 965s 965s The following objects are masked from ‘package:base’: 965s 965s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 965s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 965s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 965s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 965s Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff, 965s table, tapply, union, unique, unsplit, which.max, which.min 965s 965s Loading required package: S4Vectors 965s Loading required package: stats4 965s 965s Attaching package: ‘S4Vectors’ 965s 965s The following object is masked from ‘package:utils’: 965s 965s findMatches 965s 965s The following objects are masked from ‘package:base’: 965s 965s expand.grid, I, unname 965s 966s > 966s Other tests are currently unsupported! 966s They will be progressively added. 966s autopkgtest [14:54:29]: test pkg-r-autopkgtest: -----------------------] 967s pkg-r-autopkgtest PASS 967s autopkgtest [14:54:30]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 968s autopkgtest [14:54:31]: @@@@@@@@@@@@@@@@@@@@ summary 968s pkg-r-autopkgtest PASS 1099s nova [W] Using flock in prodstack6-arm64 1099s Creating nova instance adt-questing-arm64-r-bioc-iranges-20250502-143822-juju-7f2275-prod-proposed-migration-environment-23-bb0a5a26-c460-4e5d-82ef-4264b0859e17 from image adt/ubuntu-questing-arm64-server-20250502.img (UUID a0b7b7fd-ad05-4ea9-97eb-0f52dbbe98e1)... 1099s nova [W] Timed out waiting for b9401860-9499-4945-928d-54802a62bffa to get deleted.