0s autopkgtest [20:49:19]: starting date and time: 2025-05-02 20:49:19+0000 0s autopkgtest [20:49:19]: git checkout: 9986aa8c Merge branch 'skia/fix_network_interface' into 'ubuntu/production' 0s autopkgtest [20:49:19]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.305mb56j/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:mpich,src:python3.13 --apt-upgrade nwchem --timeout-short=300 --timeout-copy=20000 --timeout-test=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=mpich/4.3.0-5 python3.13/3.13.3-2' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-cpu4-ram16-disk100-arm64 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@sto01-arm64-4.secgroup --name adt-questing-arm64-nwchem-20250502-204919-juju-7f2275-prod-proposed-migration-environment-15-40bfb3b9-b919-4638-89ea-4080387a58f4 --image adt/ubuntu-questing-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-autopkgtest-workers-arm64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 77s autopkgtest [20:50:36]: testbed dpkg architecture: arm64 77s autopkgtest [20:50:36]: testbed apt version: 3.0.0 78s autopkgtest [20:50:37]: @@@@@@@@@@@@@@@@@@@@ test bed setup 78s autopkgtest [20:50:37]: testbed release detected to be: None 78s autopkgtest [20:50:37]: updating testbed package index (apt update) 78s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB] 79s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 79s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 79s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 79s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [43.1 kB] 79s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [167 kB] 79s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [1968 kB] 79s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 Packages [220 kB] 79s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 Packages [1473 kB] 79s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse arm64 Packages [14.3 kB] 79s Fetched 3997 kB in 1s (6276 kB/s) 80s Reading package lists... 80s autopkgtest [20:50:39]: upgrading testbed (apt dist-upgrade and autopurge) 81s Reading package lists... 81s Building dependency tree... 81s Reading state information... 81s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 82s Starting 2 pkgProblemResolver with broken count: 0 82s Done 82s Entering ResolveByKeep 83s 83s Calculating upgrade... 83s The following packages will be upgraded: 83s libperl5.40 libpython3.13 libpython3.13-minimal libpython3.13-stdlib perl 83s perl-base perl-modules-5.40 python3.13 python3.13-gdbm python3.13-minimal 83s 10 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 83s Need to get 18.3 MB of archives. 83s After this operation, 0 B of additional disk space will be used. 83s Get:1 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libperl5.40 arm64 5.40.1-3 [4780 kB] 83s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 perl arm64 5.40.1-3 [262 kB] 83s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 perl-base arm64 5.40.1-3 [1786 kB] 83s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 perl-modules-5.40 all 5.40.1-3 [3217 kB] 84s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 python3.13 arm64 3.13.3-2 [739 kB] 84s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libpython3.13 arm64 3.13.3-2 [2281 kB] 84s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libpython3.13-stdlib arm64 3.13.3-2 [2038 kB] 84s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 python3.13-minimal arm64 3.13.3-2 [2273 kB] 84s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libpython3.13-minimal arm64 3.13.3-2 [881 kB] 84s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 python3.13-gdbm arm64 3.13.3-2 [31.5 kB] 84s Fetched 18.3 MB in 1s (31.1 MB/s) 84s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 85225 files and directories currently installed.) 84s Preparing to unpack .../libperl5.40_5.40.1-3_arm64.deb ... 84s Unpacking libperl5.40:arm64 (5.40.1-3) over (5.40.1-2ubuntu0.1) ... 85s Preparing to unpack .../perl_5.40.1-3_arm64.deb ... 85s Unpacking perl (5.40.1-3) over (5.40.1-2ubuntu0.1) ... 85s Preparing to unpack .../perl-base_5.40.1-3_arm64.deb ... 85s Unpacking perl-base (5.40.1-3) over (5.40.1-2ubuntu0.1) ... 85s Setting up perl-base (5.40.1-3) ... 85s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 85225 files and directories currently installed.) 85s Preparing to unpack .../0-perl-modules-5.40_5.40.1-3_all.deb ... 85s Unpacking perl-modules-5.40 (5.40.1-3) over (5.40.1-2ubuntu0.1) ... 85s Preparing to unpack .../1-python3.13_3.13.3-2_arm64.deb ... 85s Unpacking python3.13 (3.13.3-2) over (3.13.3-1) ... 85s Preparing to unpack .../2-libpython3.13_3.13.3-2_arm64.deb ... 85s Unpacking libpython3.13:arm64 (3.13.3-2) over (3.13.3-1) ... 85s Preparing to unpack .../3-libpython3.13-stdlib_3.13.3-2_arm64.deb ... 85s Unpacking libpython3.13-stdlib:arm64 (3.13.3-2) over (3.13.3-1) ... 85s Preparing to unpack .../4-python3.13-minimal_3.13.3-2_arm64.deb ... 85s Unpacking python3.13-minimal (3.13.3-2) over (3.13.3-1) ... 86s Preparing to unpack .../5-libpython3.13-minimal_3.13.3-2_arm64.deb ... 86s Unpacking libpython3.13-minimal:arm64 (3.13.3-2) over (3.13.3-1) ... 86s Preparing to unpack .../6-python3.13-gdbm_3.13.3-2_arm64.deb ... 86s Unpacking python3.13-gdbm (3.13.3-2) over (3.13.3-1) ... 86s Setting up libpython3.13-minimal:arm64 (3.13.3-2) ... 86s Setting up perl-modules-5.40 (5.40.1-3) ... 86s Setting up python3.13-minimal (3.13.3-2) ... 87s Setting up libpython3.13-stdlib:arm64 (3.13.3-2) ... 87s Setting up python3.13-gdbm (3.13.3-2) ... 87s Setting up libpython3.13:arm64 (3.13.3-2) ... 87s Setting up python3.13 (3.13.3-2) ... 87s Setting up libperl5.40:arm64 (5.40.1-3) ... 87s Setting up perl (5.40.1-3) ... 87s Processing triggers for systemd (257.4-1ubuntu3) ... 87s Processing triggers for man-db (2.13.0-1) ... 88s Processing triggers for libc-bin (2.41-6ubuntu1) ... 88s Reading package lists... 89s Building dependency tree... 89s Reading state information... 89s Starting pkgProblemResolver with broken count: 0 89s Starting 2 pkgProblemResolver with broken count: 0 89s Done 89s Solving dependencies... 90s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 92s autopkgtest [20:50:51]: testbed running kernel: Linux 6.14.0-15-generic #15-Ubuntu SMP PREEMPT_DYNAMIC Sun Apr 6 14:37:51 UTC 2025 92s autopkgtest [20:50:51]: @@@@@@@@@@@@@@@@@@@@ apt-source nwchem 99s Get:1 http://ftpmaster.internal/ubuntu questing/universe nwchem 7.2.3-7build1 (dsc) [2834 B] 99s Get:2 http://ftpmaster.internal/ubuntu questing/universe nwchem 7.2.3-7build1 (tar) [168 MB] 99s Get:3 http://ftpmaster.internal/ubuntu questing/universe nwchem 7.2.3-7build1 (diff) [560 kB] 100s gpgv: Signature made Fri Jan 3 11:06:21 2025 UTC 100s gpgv: using RSA key 568BF22A66337CBFC9A6B9B72C83DBC8E9BD0E37 100s gpgv: Can't check signature: No public key 100s dpkg-source: warning: cannot verify inline signature for ./nwchem_7.2.3-7build1.dsc: no acceptable signature found 157s autopkgtest [20:51:56]: testing package nwchem version 7.2.3-7build1 157s autopkgtest [20:51:56]: build not needed 207s autopkgtest [20:52:46]: test testsuite.sh: preparing testbed 207s Reading package lists... 207s Building dependency tree... 207s Reading state information... 207s Starting pkgProblemResolver with broken count: 0 207s Starting 2 pkgProblemResolver with broken count: 0 207s Done 208s The following NEW packages will be installed: 208s libamd-comgr2 libamdhip64-5 libblas3 libevent-pthreads-2.1-7t64 libfabric1 208s libgfortran5 libgomp1 libhsa-runtime64-1 libhsakmt1 libhwloc-plugins 208s libhwloc15 libibmad5 libibumad3 liblapack3 libllvm17t64 libmunge2 208s libopenmpi40 libpciaccess0 libpmix2t64 librdmacm1t64 libscalapack-openmpi2.2 208s libucx0 libxnvctrl0 mpi-default-bin nwchem nwchem-data nwchem-openmpi 208s ocl-icd-libopencl1 openmpi-bin openmpi-common 208s 0 upgraded, 30 newly installed, 0 to remove and 0 not upgraded. 208s Need to get 78.4 MB of archives. 208s After this operation, 353 MB of additional disk space will be used. 208s Get:1 http://ftpmaster.internal/ubuntu questing/universe arm64 libllvm17t64 arm64 1:17.0.6-21 [24.9 MB] 209s Get:2 http://ftpmaster.internal/ubuntu questing/universe arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3build2 [14.1 MB] 209s Get:3 http://ftpmaster.internal/ubuntu questing/universe arm64 libhsakmt1 arm64 5.7.0-1build1 [63.6 kB] 209s Get:4 http://ftpmaster.internal/ubuntu questing/universe arm64 libhsa-runtime64-1 arm64 5.7.1-2build1 [286 kB] 209s Get:5 http://ftpmaster.internal/ubuntu questing/universe arm64 libamdhip64-5 arm64 5.7.1-5build1 [9707 kB] 209s Get:6 http://ftpmaster.internal/ubuntu questing/main arm64 libblas3 arm64 3.12.1-2 [161 kB] 209s Get:7 http://ftpmaster.internal/ubuntu questing/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.12-stable-10 [7922 B] 209s Get:8 http://ftpmaster.internal/ubuntu questing/main arm64 librdmacm1t64 arm64 56.0-4ubuntu1 [71.4 kB] 209s Get:9 http://ftpmaster.internal/ubuntu questing/universe arm64 libfabric1 arm64 1.17.0-3.1 [542 kB] 209s Get:10 http://ftpmaster.internal/ubuntu questing/main arm64 libgfortran5 arm64 15-20250404-0ubuntu1 [444 kB] 209s Get:11 http://ftpmaster.internal/ubuntu questing/main arm64 libgomp1 arm64 15-20250404-0ubuntu1 [147 kB] 209s Get:12 http://ftpmaster.internal/ubuntu questing/universe arm64 libhwloc15 arm64 2.12.0-1 [162 kB] 209s Get:13 http://ftpmaster.internal/ubuntu questing/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB] 209s Get:14 http://ftpmaster.internal/ubuntu questing/universe arm64 libmunge2 arm64 0.5.16-1 [15.2 kB] 209s Get:15 http://ftpmaster.internal/ubuntu questing/main arm64 libpciaccess0 arm64 0.17-3build1 [18.9 kB] 209s Get:16 http://ftpmaster.internal/ubuntu questing/main arm64 libxnvctrl0 arm64 510.47.03-0ubuntu4 [12.4 kB] 209s Get:17 http://ftpmaster.internal/ubuntu questing/universe arm64 ocl-icd-libopencl1 arm64 2.3.2-1build1 [37.6 kB] 209s Get:18 http://ftpmaster.internal/ubuntu questing/universe arm64 libhwloc-plugins arm64 2.12.0-1 [15.9 kB] 210s Get:19 http://ftpmaster.internal/ubuntu questing/universe arm64 libpmix2t64 arm64 5.0.6-5 [666 kB] 210s Get:20 http://ftpmaster.internal/ubuntu questing/main arm64 libibumad3 arm64 56.0-4ubuntu1 [31.3 kB] 210s Get:21 http://ftpmaster.internal/ubuntu questing/main arm64 libibmad5 arm64 56.0-4ubuntu1 [44.1 kB] 210s Get:22 http://ftpmaster.internal/ubuntu questing/universe arm64 libucx0 arm64 1.18.1+ds-2 [1161 kB] 210s Get:23 http://ftpmaster.internal/ubuntu questing/universe arm64 libopenmpi40 arm64 5.0.7-1 [2419 kB] 210s Get:24 http://ftpmaster.internal/ubuntu questing/universe arm64 openmpi-common all 5.0.7-1 [97.9 kB] 210s Get:25 http://ftpmaster.internal/ubuntu questing/universe arm64 openmpi-bin arm64 5.0.7-1 [195 kB] 210s Get:26 http://ftpmaster.internal/ubuntu questing/universe arm64 mpi-default-bin arm64 1.18 [2510 B] 210s Get:27 http://ftpmaster.internal/ubuntu questing/universe arm64 libscalapack-openmpi2.2 arm64 2.2.2-1ubuntu1 [1649 kB] 210s Get:28 http://ftpmaster.internal/ubuntu questing/universe arm64 nwchem-data all 7.2.3-7build1 [6076 kB] 210s Get:29 http://ftpmaster.internal/ubuntu questing/universe arm64 nwchem-openmpi arm64 7.2.3-7build1 [13.1 MB] 210s Get:30 http://ftpmaster.internal/ubuntu questing/universe arm64 nwchem all 7.2.3-7build1 [17.9 kB] 210s Fetched 78.4 MB in 2s (41.2 MB/s) 210s Selecting previously unselected package libllvm17t64:arm64. 210s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 85225 files and directories currently installed.) 210s Preparing to unpack .../00-libllvm17t64_1%3a17.0.6-21_arm64.deb ... 210s Unpacking libllvm17t64:arm64 (1:17.0.6-21) ... 211s Selecting previously unselected package libamd-comgr2:arm64. 211s Preparing to unpack .../01-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3build2_arm64.deb ... 211s Unpacking libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3build2) ... 211s Selecting previously unselected package libhsakmt1:arm64. 211s Preparing to unpack .../02-libhsakmt1_5.7.0-1build1_arm64.deb ... 211s Unpacking libhsakmt1:arm64 (5.7.0-1build1) ... 211s Selecting previously unselected package libhsa-runtime64-1. 211s Preparing to unpack .../03-libhsa-runtime64-1_5.7.1-2build1_arm64.deb ... 211s Unpacking libhsa-runtime64-1 (5.7.1-2build1) ... 211s Selecting previously unselected package libamdhip64-5. 211s Preparing to unpack .../04-libamdhip64-5_5.7.1-5build1_arm64.deb ... 211s Unpacking libamdhip64-5 (5.7.1-5build1) ... 212s Selecting previously unselected package libblas3:arm64. 212s Preparing to unpack .../05-libblas3_3.12.1-2_arm64.deb ... 212s Unpacking libblas3:arm64 (3.12.1-2) ... 212s Selecting previously unselected package libevent-pthreads-2.1-7t64:arm64. 212s Preparing to unpack .../06-libevent-pthreads-2.1-7t64_2.1.12-stable-10_arm64.deb ... 212s Unpacking libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10) ... 212s Selecting previously unselected package librdmacm1t64:arm64. 212s Preparing to unpack .../07-librdmacm1t64_56.0-4ubuntu1_arm64.deb ... 212s Unpacking librdmacm1t64:arm64 (56.0-4ubuntu1) ... 212s Selecting previously unselected package libfabric1:arm64. 212s Preparing to unpack .../08-libfabric1_1.17.0-3.1_arm64.deb ... 212s Unpacking libfabric1:arm64 (1.17.0-3.1) ... 212s Selecting previously unselected package libgfortran5:arm64. 212s Preparing to unpack .../09-libgfortran5_15-20250404-0ubuntu1_arm64.deb ... 212s Unpacking libgfortran5:arm64 (15-20250404-0ubuntu1) ... 212s Selecting previously unselected package libgomp1:arm64. 212s Preparing to unpack .../10-libgomp1_15-20250404-0ubuntu1_arm64.deb ... 212s Unpacking libgomp1:arm64 (15-20250404-0ubuntu1) ... 212s Selecting previously unselected package libhwloc15:arm64. 212s Preparing to unpack .../11-libhwloc15_2.12.0-1_arm64.deb ... 212s Unpacking libhwloc15:arm64 (2.12.0-1) ... 212s Selecting previously unselected package liblapack3:arm64. 212s Preparing to unpack .../12-liblapack3_3.12.1-2_arm64.deb ... 212s Unpacking liblapack3:arm64 (3.12.1-2) ... 212s Selecting previously unselected package libmunge2:arm64. 212s Preparing to unpack .../13-libmunge2_0.5.16-1_arm64.deb ... 212s Unpacking libmunge2:arm64 (0.5.16-1) ... 212s Selecting previously unselected package libpciaccess0:arm64. 212s Preparing to unpack .../14-libpciaccess0_0.17-3build1_arm64.deb ... 212s Unpacking libpciaccess0:arm64 (0.17-3build1) ... 212s Selecting previously unselected package libxnvctrl0:arm64. 212s Preparing to unpack .../15-libxnvctrl0_510.47.03-0ubuntu4_arm64.deb ... 212s Unpacking libxnvctrl0:arm64 (510.47.03-0ubuntu4) ... 212s Selecting previously unselected package ocl-icd-libopencl1:arm64. 212s Preparing to unpack .../16-ocl-icd-libopencl1_2.3.2-1build1_arm64.deb ... 212s Unpacking ocl-icd-libopencl1:arm64 (2.3.2-1build1) ... 212s Selecting previously unselected package libhwloc-plugins:arm64. 212s Preparing to unpack .../17-libhwloc-plugins_2.12.0-1_arm64.deb ... 212s Unpacking libhwloc-plugins:arm64 (2.12.0-1) ... 212s Selecting previously unselected package libpmix2t64:arm64. 212s Preparing to unpack .../18-libpmix2t64_5.0.6-5_arm64.deb ... 212s Unpacking libpmix2t64:arm64 (5.0.6-5) ... 212s Selecting previously unselected package libibumad3:arm64. 212s Preparing to unpack .../19-libibumad3_56.0-4ubuntu1_arm64.deb ... 212s Unpacking libibumad3:arm64 (56.0-4ubuntu1) ... 212s Selecting previously unselected package libibmad5:arm64. 212s Preparing to unpack .../20-libibmad5_56.0-4ubuntu1_arm64.deb ... 212s Unpacking libibmad5:arm64 (56.0-4ubuntu1) ... 212s Selecting previously unselected package libucx0:arm64. 212s Preparing to unpack .../21-libucx0_1.18.1+ds-2_arm64.deb ... 212s Unpacking libucx0:arm64 (1.18.1+ds-2) ... 212s Selecting previously unselected package libopenmpi40:arm64. 212s Preparing to unpack .../22-libopenmpi40_5.0.7-1_arm64.deb ... 212s Unpacking libopenmpi40:arm64 (5.0.7-1) ... 212s Selecting previously unselected package openmpi-common. 212s Preparing to unpack .../23-openmpi-common_5.0.7-1_all.deb ... 212s Unpacking openmpi-common (5.0.7-1) ... 212s Selecting previously unselected package openmpi-bin. 212s Preparing to unpack .../24-openmpi-bin_5.0.7-1_arm64.deb ... 212s Unpacking openmpi-bin (5.0.7-1) ... 212s Selecting previously unselected package mpi-default-bin. 212s Preparing to unpack .../25-mpi-default-bin_1.18_arm64.deb ... 212s Unpacking mpi-default-bin (1.18) ... 212s Selecting previously unselected package libscalapack-openmpi2.2:arm64. 212s Preparing to unpack .../26-libscalapack-openmpi2.2_2.2.2-1ubuntu1_arm64.deb ... 212s Unpacking libscalapack-openmpi2.2:arm64 (2.2.2-1ubuntu1) ... 212s Selecting previously unselected package nwchem-data. 213s Preparing to unpack .../27-nwchem-data_7.2.3-7build1_all.deb ... 213s Unpacking nwchem-data (7.2.3-7build1) ... 213s Selecting previously unselected package nwchem-openmpi. 213s Preparing to unpack .../28-nwchem-openmpi_7.2.3-7build1_arm64.deb ... 213s Unpacking nwchem-openmpi (7.2.3-7build1) ... 213s Selecting previously unselected package nwchem. 213s Preparing to unpack .../29-nwchem_7.2.3-7build1_all.deb ... 213s Unpacking nwchem (7.2.3-7build1) ... 213s Setting up libpciaccess0:arm64 (0.17-3build1) ... 213s Setting up libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10) ... 213s Setting up nwchem-data (7.2.3-7build1) ... 213s Setting up libibumad3:arm64 (56.0-4ubuntu1) ... 213s Setting up libibmad5:arm64 (56.0-4ubuntu1) ... 213s Setting up libgomp1:arm64 (15-20250404-0ubuntu1) ... 213s Setting up libxnvctrl0:arm64 (510.47.03-0ubuntu4) ... 213s Setting up libblas3:arm64 (3.12.1-2) ... 213s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 213s Setting up libmunge2:arm64 (0.5.16-1) ... 213s Setting up libllvm17t64:arm64 (1:17.0.6-21) ... 213s Setting up libhwloc15:arm64 (2.12.0-1) ... 213s Setting up libgfortran5:arm64 (15-20250404-0ubuntu1) ... 213s Setting up ocl-icd-libopencl1:arm64 (2.3.2-1build1) ... 213s Setting up openmpi-common (5.0.7-1) ... 213s Setting up librdmacm1t64:arm64 (56.0-4ubuntu1) ... 213s Setting up libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3build2) ... 213s Setting up libhsakmt1:arm64 (5.7.0-1build1) ... 213s Setting up libfabric1:arm64 (1.17.0-3.1) ... 213s Setting up liblapack3:arm64 (3.12.1-2) ... 213s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 213s Setting up libhwloc-plugins:arm64 (2.12.0-1) ... 213s Setting up libpmix2t64:arm64 (5.0.6-5) ... 213s Setting up libhsa-runtime64-1 (5.7.1-2build1) ... 213s Setting up libamdhip64-5 (5.7.1-5build1) ... 213s Setting up libucx0:arm64 (1.18.1+ds-2) ... 213s Setting up libopenmpi40:arm64 (5.0.7-1) ... 213s Setting up openmpi-bin (5.0.7-1) ... 213s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 213s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 213s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 213s Setting up mpi-default-bin (1.18) ... 213s Setting up libscalapack-openmpi2.2:arm64 (2.2.2-1ubuntu1) ... 213s Setting up nwchem-openmpi (7.2.3-7build1) ... 213s Setting up nwchem (7.2.3-7build1) ... 213s Processing triggers for man-db (2.13.0-1) ... 214s Processing triggers for libc-bin (2.41-6ubuntu1) ... 214s autopkgtest [20:52:53]: test testsuite.sh: [----------------------- 215s ===== TESTING NWCHEM WITH DEFAULT MPI INSTALLATION ===== 215s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 215s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 215s 215s 215s Running tests/dft_he2+/dft_he2+ 215s 215s cleaning scratch 215s copying input and verified output files 215s running nwchem (/usr/bin/nwchem) with 1 processors 215s 248s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 248s OK 248s 248s Running tests/qmmm_grad0/qmmm_grad0 248s 248s cleaning scratch 248s copying input and verified output files 248s running nwchem (/usr/bin/nwchem) with 1 processors 248s 254s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 254s OK 254s 254s Running tests/auh2o/auh2o 254s 254s cleaning scratch 254s copying input and verified output files 254s running nwchem (/usr/bin/nwchem) with 1 processors 254s 257s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 257s OK 257s 257s Running tests/autosym/autosym 257s 257s cleaning scratch 257s copying input and verified output files 257s running nwchem (/usr/bin/nwchem) with 1 processors 257s 286s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 286s OK 286s 286s Running tests/h2mp2/h2mp2 286s 286s cleaning scratch 286s copying input and verified output files 286s running nwchem (/usr/bin/nwchem) with 1 processors 286s 292s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 292s OK 292s 292s Running tests/h2o/h2o 292s 292s cleaning scratch 292s copying input and verified output files 292s running nwchem (/usr/bin/nwchem) with 1 processors 292s 294s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 294s OK 294s 294s Running tests/hess_h2o/hess_h2o 294s 294s cleaning scratch 294s copying input and verified output files 294s running nwchem (/usr/bin/nwchem) with 1 processors 294s 308s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 308s OK 308s 308s Running tests/prop_h2o/prop_h2o 308s 308s cleaning scratch 308s copying input and verified output files 308s running nwchem (/usr/bin/nwchem) with 1 processors 308s 316s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 316s OK 316s 316s Running tests/geom_zmatrix/geom_zmatrix 316s 316s cleaning scratch 316s copying input and verified output files 316s running nwchem (/usr/bin/nwchem) with 1 processors 316s 322s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 322s OK 322s 322s Running tests/rimp2_ne/rimp2_ne 322s 322s cleaning scratch 322s copying input and verified output files 322s running nwchem (/usr/bin/nwchem) with 1 processors 322s 327s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 327s OK 327s 327s Running tests/small_intchk/small_intchk 327s 327s cleaning scratch 327s copying input and verified output files 327s running nwchem (/usr/bin/nwchem) with 1 processors 327s 337s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 337s OK 337s 337s Running tests/tagcheck/tagcheck 337s 337s cleaning scratch 337s copying input and verified output files 337s running nwchem (/usr/bin/nwchem) with 1 processors 337s 342s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 342s OK 342s 342s Running tests/testtab/testtab 342s 342s cleaning scratch 342s copying input and verified output files 342s running nwchem (/usr/bin/nwchem) with 1 processors 342s 343s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 343s OK 343s 343s Running tests/h2o_dk/h2o_dk 343s 343s cleaning scratch 343s copying input and verified output files 343s running nwchem (/usr/bin/nwchem) with 1 processors 343s 350s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 350s OK 350s 350s Running tests/cosmo_h2o/cosmo_h2o 350s 350s cleaning scratch 350s copying input and verified output files 350s running nwchem (/usr/bin/nwchem) with 1 processors 350s 354s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 354s OK 354s 354s Running tests/ch5n_nbo/ch5n_nbo 354s 354s cleaning scratch 354s copying input and verified output files 354s running nwchem (/usr/bin/nwchem) with 1 processors 354s 355s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 355s OK 355s 355s Running tests/h2s_finite/h2s_finite 355s 355s cleaning scratch 355s copying input and verified output files 355s running nwchem (/usr/bin/nwchem) with 1 processors 355s 362s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 362s OK 362s 362s Running tests/pyqa3/pyqa3 362s 362s cleaning scratch 362s copying input and verified output files 362s running nwchem (/usr/bin/nwchem) with 1 processors 362s 370s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 370s OK 370s 370s Running tests/startag/startag 370s 370s cleaning scratch 370s copying input and verified output files 370s running nwchem (/usr/bin/nwchem) with 1 processors 370s 373s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 373s OK 373s 373s Running tests/esp/esp 373s 373s cleaning scratch 373s copying input and verified output files 373s running nwchem (/usr/bin/nwchem) with 1 processors 373s 376s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 376s ESP charges match 376s 376s 376s Running tests/esp_uhf/esp_uhf 376s 376s cleaning scratch 376s copying input and verified output files 376s running nwchem (/usr/bin/nwchem) with 1 processors 376s 381s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 381s ESP charges match 381s 381s 381s Running tests/dft_bsse/dft_bsse 381s 381s cleaning scratch 381s copying input and verified output files 381s running nwchem (/usr/bin/nwchem) with 1 processors 381s 387s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 387s OK 387s 387s Running tests/dplot_dft/dplot_dft 387s 387s cleaning scratch 387s copying input and verified output files 387s running nwchem (/usr/bin/nwchem) with 1 processors 387s 389s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 389s OK 389s 389s Running tests/dft_meta/dft_meta 389s 389s cleaning scratch 389s copying input and verified output files 389s running nwchem (/usr/bin/nwchem) with 1 processors 389s 447s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 447s OK 447s 447s Running tests/dft_mpwb1khf/dft_mpwb1khf 447s 447s cleaning scratch 447s copying input and verified output files 447s running nwchem (/usr/bin/nwchem) with 1 processors 447s 455s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 455s OK 455s 455s Running tests/prop_uhf_h2o/prop_uhf_h2o 455s 455s cleaning scratch 455s copying input and verified output files 455s running nwchem (/usr/bin/nwchem) with 1 processors 455s 498s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 498s OK 498s 498s Running tests/et_zn_dimer/et_zn_dimer 498s 498s cleaning scratch 498s copying input and verified output files 498s running nwchem (/usr/bin/nwchem) with 1 processors 498s 534s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 534s OK 534s 534s Running tests/vectors_rotate/vectors_rotate 534s 534s cleaning scratch 534s copying input and verified output files 534s running nwchem (/usr/bin/nwchem) with 1 processors 534s 539s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 539s OK 539s 539s Running tests/sad_ch3hf/sad_ch3hf 539s 539s cleaning scratch 539s copying input and verified output files 539s running nwchem (/usr/bin/nwchem) with 1 processors 539s 573s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 573s OK 573s 573s Running tests/band/band 573s 573s cleaning scratch 573s copying input and verified output files 573s running nwchem (/usr/bin/nwchem) with 1 processors 573s 581s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 581s OK 581s 581s Running tests/pspw/pspw 581s 581s cleaning scratch 581s copying input and verified output files 581s running nwchem (/usr/bin/nwchem) with 1 processors 581s 596s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 596s OK 596s 596s Running tests/pspw_stress/pspw_stress 596s 596s cleaning scratch 596s copying input and verified output files 596s running nwchem (/usr/bin/nwchem) with 1 processors 596s 614s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 614s OK 614s 614s Running tests/mcscf_ch2/mcscf_ch2 614s 614s cleaning scratch 614s copying input and verified output files 614s running nwchem (/usr/bin/nwchem) with 1 processors 614s 679s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 679s OK 679s 679s Running tests/dft_li2freq/dft_li2freq 679s 679s cleaning scratch 679s copying input and verified output files 679s running nwchem (/usr/bin/nwchem) with 1 processors 679s 745s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 745s OK 745s 745s Running tests/n2_ccsd/n2_ccsd 745s 745s cleaning scratch 745s copying input and verified output files 745s running nwchem (/usr/bin/nwchem) with 1 processors 745s 807s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 807s OK 807s 807s Running tests/tce_ccsd_t_h2o/tce_ccsd_t_h2o 807s 807s cleaning scratch 807s copying input and verified output files 807s running nwchem (/usr/bin/nwchem) with 1 processors 807s 811s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 811s OK 811s 811s Running tests/tddft_h2o/tddft_h2o 811s 811s cleaning scratch 811s copying input and verified output files 811s running nwchem (/usr/bin/nwchem) with 1 processors 811s 855s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 855s OK 855s 855s Running tests/rt_tddft_dimer_charge/rt_tddft_dimer_charge 855s 855s cleaning scratch 855s copying input and verified output files 855s running nwchem (/usr/bin/nwchem) with 1 processors 855s 1494s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1494s OK 1494s 1494s Running tests/tce_eaccsd_ozone/tce_eaccsd_ozone 1494s 1494s cleaning scratch 1494s copying input and verified output files 1494s running nwchem (/usr/bin/nwchem) with 1 processors 1494s 1511s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1511s OK 1511s 1511s Running tests/tce_ipccsd_f2/tce_ipccsd_f2 1511s 1511s cleaning scratch 1511s copying input and verified output files 1511s running nwchem (/usr/bin/nwchem) with 1 processors 1511s 1515s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1515s OK 1515s 1515s Running tests/tce_hyperpolar_ccsd_small/tce_hyperpolar_ccsd_small 1515s 1515s cleaning scratch 1515s copying input and verified output files 1515s running nwchem (/usr/bin/nwchem) with 1 processors 1515s 1584s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1584s OK 1584s 1584s Running tests/mp2_scs_n2/mp2_scs_n2 1584s 1584s cleaning scratch 1584s copying input and verified output files 1584s running nwchem (/usr/bin/nwchem) with 1 processors 1584s 1608s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1608s OK 1608s 1608s Running tests/tddftgrad_n2_uks/tddftgrad_n2_uks 1608s 1608s cleaning scratch 1608s copying input and verified output files 1608s running nwchem (/usr/bin/nwchem) with 1 processors 1608s 1655s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1655s OK 1655s 1655s Running tests/tddftgrad_ch2o/tddftgrad_ch2o 1655s 1655s cleaning scratch 1655s copying input and verified output files 1655s running nwchem (/usr/bin/nwchem) with 1 processors 1655s 1668s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1668s OK 1668s 1668s Running tests/water/water_md 1668s 1668s cleaning scratch 1668s copying input and verified output files 1668s running nwchem (/usr/bin/nwchem) with 1 processors 1668s 1668s verifying nwout ...... skipped 1668s verifying test ....... completed 1668s 1668s Running tests/water/water_pme 1668s 1668s cleaning scratch 1668s copying input and verified output files 1668s running nwchem (/usr/bin/nwchem) with 1 processors 1668s 1668s verifying nwout ...... skipped 1668s verifying test ....... completed 1668s 1668s Running tests/pspw_md/pspw_md 1668s 1668s cleaning scratch 1668s copying input and verified output files 1668s running nwchem (/usr/bin/nwchem) with 1 processors 1668s 1686s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1686s OK 1686s 1686s Running tests/cosmo_h3co/cosmo_h3co 1686s 1686s cleaning scratch 1686s copying input and verified output files 1686s running nwchem (/usr/bin/nwchem) with 1 processors 1686s 1704s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1704s OK 1704s 1704s OK 1705s autopkgtest [21:17:44]: test testsuite.sh: -----------------------] 1705s autopkgtest [21:17:44]: test testsuite.sh: - - - - - - - - - - results - - - - - - - - - - 1705s testsuite.sh PASS 1705s autopkgtest [21:17:44]: test testsuite-openmpi: preparing testbed 1778s autopkgtest [21:18:57]: testbed dpkg architecture: arm64 1778s autopkgtest [21:18:57]: testbed apt version: 3.0.0 1778s autopkgtest [21:18:57]: @@@@@@@@@@@@@@@@@@@@ test bed setup 1778s autopkgtest [21:18:57]: testbed release detected to be: questing 1779s autopkgtest [21:18:58]: updating testbed package index (apt update) 1779s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB] 1779s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 1779s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 1779s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 1779s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [1968 kB] 1780s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [43.1 kB] 1780s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [167 kB] 1780s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 Packages [220 kB] 1780s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 Packages [1473 kB] 1780s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse arm64 Packages [14.3 kB] 1780s Fetched 3997 kB in 1s (4132 kB/s) 1781s Reading package lists... 1782s autopkgtest [21:19:01]: upgrading testbed (apt dist-upgrade and autopurge) 1782s Reading package lists... 1782s Building dependency tree... 1782s Reading state information... 1782s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 1782s Starting 2 pkgProblemResolver with broken count: 0 1782s Done 1783s Entering ResolveByKeep 1783s 1783s Calculating upgrade... 1784s The following packages will be upgraded: 1784s libperl5.40 libpython3.13 libpython3.13-minimal libpython3.13-stdlib perl 1784s perl-base perl-modules-5.40 python3.13 python3.13-gdbm python3.13-minimal 1784s 10 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1784s Need to get 18.3 MB of archives. 1784s After this operation, 0 B of additional disk space will be used. 1784s Get:1 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libperl5.40 arm64 5.40.1-3 [4780 kB] 1784s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 perl arm64 5.40.1-3 [262 kB] 1784s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 perl-base arm64 5.40.1-3 [1786 kB] 1784s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 perl-modules-5.40 all 5.40.1-3 [3217 kB] 1784s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 python3.13 arm64 3.13.3-2 [739 kB] 1784s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libpython3.13 arm64 3.13.3-2 [2281 kB] 1784s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libpython3.13-stdlib arm64 3.13.3-2 [2038 kB] 1784s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 python3.13-minimal arm64 3.13.3-2 [2273 kB] 1785s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libpython3.13-minimal arm64 3.13.3-2 [881 kB] 1785s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 python3.13-gdbm arm64 3.13.3-2 [31.5 kB] 1785s Fetched 18.3 MB in 1s (23.1 MB/s) 1785s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 85225 files and directories currently installed.) 1785s Preparing to unpack .../libperl5.40_5.40.1-3_arm64.deb ... 1785s Unpacking libperl5.40:arm64 (5.40.1-3) over (5.40.1-2ubuntu0.1) ... 1785s Preparing to unpack .../perl_5.40.1-3_arm64.deb ... 1785s Unpacking perl (5.40.1-3) over (5.40.1-2ubuntu0.1) ... 1785s Preparing to unpack .../perl-base_5.40.1-3_arm64.deb ... 1785s Unpacking perl-base (5.40.1-3) over (5.40.1-2ubuntu0.1) ... 1785s Setting up perl-base (5.40.1-3) ... 1786s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 85225 files and directories currently installed.) 1786s Preparing to unpack .../0-perl-modules-5.40_5.40.1-3_all.deb ... 1786s Unpacking perl-modules-5.40 (5.40.1-3) over (5.40.1-2ubuntu0.1) ... 1786s Preparing to unpack .../1-python3.13_3.13.3-2_arm64.deb ... 1786s Unpacking python3.13 (3.13.3-2) over (3.13.3-1) ... 1786s Preparing to unpack .../2-libpython3.13_3.13.3-2_arm64.deb ... 1786s Unpacking libpython3.13:arm64 (3.13.3-2) over (3.13.3-1) ... 1786s Preparing to unpack .../3-libpython3.13-stdlib_3.13.3-2_arm64.deb ... 1786s Unpacking libpython3.13-stdlib:arm64 (3.13.3-2) over (3.13.3-1) ... 1786s Preparing to unpack .../4-python3.13-minimal_3.13.3-2_arm64.deb ... 1786s Unpacking python3.13-minimal (3.13.3-2) over (3.13.3-1) ... 1786s Preparing to unpack .../5-libpython3.13-minimal_3.13.3-2_arm64.deb ... 1786s Unpacking libpython3.13-minimal:arm64 (3.13.3-2) over (3.13.3-1) ... 1786s Preparing to unpack .../6-python3.13-gdbm_3.13.3-2_arm64.deb ... 1786s Unpacking python3.13-gdbm (3.13.3-2) over (3.13.3-1) ... 1786s Setting up libpython3.13-minimal:arm64 (3.13.3-2) ... 1786s Setting up perl-modules-5.40 (5.40.1-3) ... 1786s Setting up python3.13-minimal (3.13.3-2) ... 1787s Setting up libpython3.13-stdlib:arm64 (3.13.3-2) ... 1787s Setting up python3.13-gdbm (3.13.3-2) ... 1787s Setting up libpython3.13:arm64 (3.13.3-2) ... 1787s Setting up python3.13 (3.13.3-2) ... 1788s Setting up libperl5.40:arm64 (5.40.1-3) ... 1788s Setting up perl (5.40.1-3) ... 1788s Processing triggers for systemd (257.4-1ubuntu3) ... 1788s Processing triggers for man-db (2.13.0-1) ... 1788s Processing triggers for libc-bin (2.41-6ubuntu1) ... 1789s Reading package lists... 1789s Building dependency tree... 1789s Reading state information... 1789s Starting pkgProblemResolver with broken count: 0 1789s Starting 2 pkgProblemResolver with broken count: 0 1789s Done 1790s Solving dependencies... 1790s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1793s Reading package lists... 1793s Building dependency tree... 1793s Reading state information... 1793s Starting pkgProblemResolver with broken count: 0 1793s Starting 2 pkgProblemResolver with broken count: 0 1793s Done 1794s The following NEW packages will be installed: 1794s libamd-comgr2 libamdhip64-5 libblas3 libevent-pthreads-2.1-7t64 libfabric1 1794s libgfortran5 libgomp1 libhsa-runtime64-1 libhsakmt1 libhwloc-plugins 1794s libhwloc15 libibmad5 libibumad3 liblapack3 libllvm17t64 libmunge2 1794s libopenmpi40 libpciaccess0 libpmix2t64 librdmacm1t64 libscalapack-openmpi2.2 1794s libucx0 libxnvctrl0 mpi-default-bin nwchem-data nwchem-openmpi 1794s ocl-icd-libopencl1 openmpi-bin openmpi-common 1794s 0 upgraded, 29 newly installed, 0 to remove and 0 not upgraded. 1794s Need to get 78.4 MB of archives. 1794s After this operation, 352 MB of additional disk space will be used. 1794s Get:1 http://ftpmaster.internal/ubuntu questing/universe arm64 libllvm17t64 arm64 1:17.0.6-21 [24.9 MB] 1794s Get:2 http://ftpmaster.internal/ubuntu questing/universe arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3build2 [14.1 MB] 1795s Get:3 http://ftpmaster.internal/ubuntu questing/universe arm64 libhsakmt1 arm64 5.7.0-1build1 [63.6 kB] 1795s Get:4 http://ftpmaster.internal/ubuntu questing/universe arm64 libhsa-runtime64-1 arm64 5.7.1-2build1 [286 kB] 1795s Get:5 http://ftpmaster.internal/ubuntu questing/universe arm64 libamdhip64-5 arm64 5.7.1-5build1 [9707 kB] 1795s Get:6 http://ftpmaster.internal/ubuntu questing/main arm64 libblas3 arm64 3.12.1-2 [161 kB] 1795s Get:7 http://ftpmaster.internal/ubuntu questing/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.12-stable-10 [7922 B] 1795s Get:8 http://ftpmaster.internal/ubuntu questing/main arm64 librdmacm1t64 arm64 56.0-4ubuntu1 [71.4 kB] 1795s Get:9 http://ftpmaster.internal/ubuntu questing/universe arm64 libfabric1 arm64 1.17.0-3.1 [542 kB] 1795s Get:10 http://ftpmaster.internal/ubuntu questing/main arm64 libgfortran5 arm64 15-20250404-0ubuntu1 [444 kB] 1795s Get:11 http://ftpmaster.internal/ubuntu questing/main arm64 libgomp1 arm64 15-20250404-0ubuntu1 [147 kB] 1795s Get:12 http://ftpmaster.internal/ubuntu questing/universe arm64 libhwloc15 arm64 2.12.0-1 [162 kB] 1795s Get:13 http://ftpmaster.internal/ubuntu questing/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB] 1795s Get:14 http://ftpmaster.internal/ubuntu questing/universe arm64 libmunge2 arm64 0.5.16-1 [15.2 kB] 1795s Get:15 http://ftpmaster.internal/ubuntu questing/main arm64 libpciaccess0 arm64 0.17-3build1 [18.9 kB] 1795s Get:16 http://ftpmaster.internal/ubuntu questing/main arm64 libxnvctrl0 arm64 510.47.03-0ubuntu4 [12.4 kB] 1795s Get:17 http://ftpmaster.internal/ubuntu questing/universe arm64 ocl-icd-libopencl1 arm64 2.3.2-1build1 [37.6 kB] 1795s Get:18 http://ftpmaster.internal/ubuntu questing/universe arm64 libhwloc-plugins arm64 2.12.0-1 [15.9 kB] 1795s Get:19 http://ftpmaster.internal/ubuntu questing/universe arm64 libpmix2t64 arm64 5.0.6-5 [666 kB] 1795s Get:20 http://ftpmaster.internal/ubuntu questing/main arm64 libibumad3 arm64 56.0-4ubuntu1 [31.3 kB] 1795s Get:21 http://ftpmaster.internal/ubuntu questing/main arm64 libibmad5 arm64 56.0-4ubuntu1 [44.1 kB] 1795s Get:22 http://ftpmaster.internal/ubuntu questing/universe arm64 libucx0 arm64 1.18.1+ds-2 [1161 kB] 1795s Get:23 http://ftpmaster.internal/ubuntu questing/universe arm64 libopenmpi40 arm64 5.0.7-1 [2419 kB] 1795s Get:24 http://ftpmaster.internal/ubuntu questing/universe arm64 openmpi-common all 5.0.7-1 [97.9 kB] 1795s Get:25 http://ftpmaster.internal/ubuntu questing/universe arm64 openmpi-bin arm64 5.0.7-1 [195 kB] 1795s Get:26 http://ftpmaster.internal/ubuntu questing/universe arm64 mpi-default-bin arm64 1.18 [2510 B] 1795s Get:27 http://ftpmaster.internal/ubuntu questing/universe arm64 libscalapack-openmpi2.2 arm64 2.2.2-1ubuntu1 [1649 kB] 1795s Get:28 http://ftpmaster.internal/ubuntu questing/universe arm64 nwchem-data all 7.2.3-7build1 [6076 kB] 1796s Get:29 http://ftpmaster.internal/ubuntu questing/universe arm64 nwchem-openmpi arm64 7.2.3-7build1 [13.1 MB] 1796s Fetched 78.4 MB in 2s (41.9 MB/s) 1796s Selecting previously unselected package libllvm17t64:arm64. 1796s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 85225 files and directories currently installed.) 1796s Preparing to unpack .../00-libllvm17t64_1%3a17.0.6-21_arm64.deb ... 1796s Unpacking libllvm17t64:arm64 (1:17.0.6-21) ... 1797s Selecting previously unselected package libamd-comgr2:arm64. 1797s Preparing to unpack .../01-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3build2_arm64.deb ... 1797s Unpacking libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3build2) ... 1797s Selecting previously unselected package libhsakmt1:arm64. 1797s Preparing to unpack .../02-libhsakmt1_5.7.0-1build1_arm64.deb ... 1797s Unpacking libhsakmt1:arm64 (5.7.0-1build1) ... 1797s Selecting previously unselected package libhsa-runtime64-1. 1797s Preparing to unpack .../03-libhsa-runtime64-1_5.7.1-2build1_arm64.deb ... 1797s Unpacking libhsa-runtime64-1 (5.7.1-2build1) ... 1797s Selecting previously unselected package libamdhip64-5. 1797s Preparing to unpack .../04-libamdhip64-5_5.7.1-5build1_arm64.deb ... 1797s Unpacking libamdhip64-5 (5.7.1-5build1) ... 1797s Selecting previously unselected package libblas3:arm64. 1797s Preparing to unpack .../05-libblas3_3.12.1-2_arm64.deb ... 1797s Unpacking libblas3:arm64 (3.12.1-2) ... 1797s Selecting previously unselected package libevent-pthreads-2.1-7t64:arm64. 1797s Preparing to unpack .../06-libevent-pthreads-2.1-7t64_2.1.12-stable-10_arm64.deb ... 1797s Unpacking libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10) ... 1797s Selecting previously unselected package librdmacm1t64:arm64. 1797s Preparing to unpack .../07-librdmacm1t64_56.0-4ubuntu1_arm64.deb ... 1797s Unpacking librdmacm1t64:arm64 (56.0-4ubuntu1) ... 1797s Selecting previously unselected package libfabric1:arm64. 1797s Preparing to unpack .../08-libfabric1_1.17.0-3.1_arm64.deb ... 1797s Unpacking libfabric1:arm64 (1.17.0-3.1) ... 1797s Selecting previously unselected package libgfortran5:arm64. 1797s Preparing to unpack .../09-libgfortran5_15-20250404-0ubuntu1_arm64.deb ... 1797s Unpacking libgfortran5:arm64 (15-20250404-0ubuntu1) ... 1797s Selecting previously unselected package libgomp1:arm64. 1797s Preparing to unpack .../10-libgomp1_15-20250404-0ubuntu1_arm64.deb ... 1797s Unpacking libgomp1:arm64 (15-20250404-0ubuntu1) ... 1797s Selecting previously unselected package libhwloc15:arm64. 1797s Preparing to unpack .../11-libhwloc15_2.12.0-1_arm64.deb ... 1797s Unpacking libhwloc15:arm64 (2.12.0-1) ... 1797s Selecting previously unselected package liblapack3:arm64. 1797s Preparing to unpack .../12-liblapack3_3.12.1-2_arm64.deb ... 1797s Unpacking liblapack3:arm64 (3.12.1-2) ... 1797s Selecting previously unselected package libmunge2:arm64. 1797s Preparing to unpack .../13-libmunge2_0.5.16-1_arm64.deb ... 1797s Unpacking libmunge2:arm64 (0.5.16-1) ... 1797s Selecting previously unselected package libpciaccess0:arm64. 1797s Preparing to unpack .../14-libpciaccess0_0.17-3build1_arm64.deb ... 1797s Unpacking libpciaccess0:arm64 (0.17-3build1) ... 1798s Selecting previously unselected package libxnvctrl0:arm64. 1798s Preparing to unpack .../15-libxnvctrl0_510.47.03-0ubuntu4_arm64.deb ... 1798s Unpacking libxnvctrl0:arm64 (510.47.03-0ubuntu4) ... 1798s Selecting previously unselected package ocl-icd-libopencl1:arm64. 1798s Preparing to unpack .../16-ocl-icd-libopencl1_2.3.2-1build1_arm64.deb ... 1798s Unpacking ocl-icd-libopencl1:arm64 (2.3.2-1build1) ... 1798s Selecting previously unselected package libhwloc-plugins:arm64. 1798s Preparing to unpack .../17-libhwloc-plugins_2.12.0-1_arm64.deb ... 1798s Unpacking libhwloc-plugins:arm64 (2.12.0-1) ... 1798s Selecting previously unselected package libpmix2t64:arm64. 1798s Preparing to unpack .../18-libpmix2t64_5.0.6-5_arm64.deb ... 1798s Unpacking libpmix2t64:arm64 (5.0.6-5) ... 1798s Selecting previously unselected package libibumad3:arm64. 1798s Preparing to unpack .../19-libibumad3_56.0-4ubuntu1_arm64.deb ... 1798s Unpacking libibumad3:arm64 (56.0-4ubuntu1) ... 1798s Selecting previously unselected package libibmad5:arm64. 1798s Preparing to unpack .../20-libibmad5_56.0-4ubuntu1_arm64.deb ... 1798s Unpacking libibmad5:arm64 (56.0-4ubuntu1) ... 1798s Selecting previously unselected package libucx0:arm64. 1798s Preparing to unpack .../21-libucx0_1.18.1+ds-2_arm64.deb ... 1798s Unpacking libucx0:arm64 (1.18.1+ds-2) ... 1798s Selecting previously unselected package libopenmpi40:arm64. 1798s Preparing to unpack .../22-libopenmpi40_5.0.7-1_arm64.deb ... 1798s Unpacking libopenmpi40:arm64 (5.0.7-1) ... 1798s Selecting previously unselected package openmpi-common. 1798s Preparing to unpack .../23-openmpi-common_5.0.7-1_all.deb ... 1798s Unpacking openmpi-common (5.0.7-1) ... 1798s Selecting previously unselected package openmpi-bin. 1798s Preparing to unpack .../24-openmpi-bin_5.0.7-1_arm64.deb ... 1798s Unpacking openmpi-bin (5.0.7-1) ... 1798s Selecting previously unselected package mpi-default-bin. 1798s Preparing to unpack .../25-mpi-default-bin_1.18_arm64.deb ... 1798s Unpacking mpi-default-bin (1.18) ... 1798s Selecting previously unselected package libscalapack-openmpi2.2:arm64. 1798s Preparing to unpack .../26-libscalapack-openmpi2.2_2.2.2-1ubuntu1_arm64.deb ... 1798s Unpacking libscalapack-openmpi2.2:arm64 (2.2.2-1ubuntu1) ... 1798s Selecting previously unselected package nwchem-data. 1798s Preparing to unpack .../27-nwchem-data_7.2.3-7build1_all.deb ... 1798s Unpacking nwchem-data (7.2.3-7build1) ... 1798s Selecting previously unselected package nwchem-openmpi. 1798s Preparing to unpack .../28-nwchem-openmpi_7.2.3-7build1_arm64.deb ... 1798s Unpacking nwchem-openmpi (7.2.3-7build1) ... 1799s Setting up libpciaccess0:arm64 (0.17-3build1) ... 1799s Setting up libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10) ... 1799s Setting up nwchem-data (7.2.3-7build1) ... 1799s Setting up libibumad3:arm64 (56.0-4ubuntu1) ... 1799s Setting up libibmad5:arm64 (56.0-4ubuntu1) ... 1799s Setting up libgomp1:arm64 (15-20250404-0ubuntu1) ... 1799s Setting up libxnvctrl0:arm64 (510.47.03-0ubuntu4) ... 1799s Setting up libblas3:arm64 (3.12.1-2) ... 1799s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 1799s Setting up libmunge2:arm64 (0.5.16-1) ... 1799s Setting up libllvm17t64:arm64 (1:17.0.6-21) ... 1799s Setting up libhwloc15:arm64 (2.12.0-1) ... 1799s Setting up libgfortran5:arm64 (15-20250404-0ubuntu1) ... 1799s Setting up ocl-icd-libopencl1:arm64 (2.3.2-1build1) ... 1799s Setting up openmpi-common (5.0.7-1) ... 1799s Setting up librdmacm1t64:arm64 (56.0-4ubuntu1) ... 1799s Setting up libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3build2) ... 1799s Setting up libhsakmt1:arm64 (5.7.0-1build1) ... 1799s Setting up libfabric1:arm64 (1.17.0-3.1) ... 1799s Setting up liblapack3:arm64 (3.12.1-2) ... 1799s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 1799s Setting up libhwloc-plugins:arm64 (2.12.0-1) ... 1799s Setting up libpmix2t64:arm64 (5.0.6-5) ... 1799s Setting up libhsa-runtime64-1 (5.7.1-2build1) ... 1799s Setting up libamdhip64-5 (5.7.1-5build1) ... 1799s Setting up libucx0:arm64 (1.18.1+ds-2) ... 1799s Setting up libopenmpi40:arm64 (5.0.7-1) ... 1799s Setting up openmpi-bin (5.0.7-1) ... 1799s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 1799s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 1799s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 1799s Setting up mpi-default-bin (1.18) ... 1799s Setting up libscalapack-openmpi2.2:arm64 (2.2.2-1ubuntu1) ... 1799s Setting up nwchem-openmpi (7.2.3-7build1) ... 1799s Processing triggers for man-db (2.13.0-1) ... 1799s Processing triggers for libc-bin (2.41-6ubuntu1) ... 1949s autopkgtest [21:21:48]: test testsuite-openmpi: [----------------------- 1949s ===== TESTING NWCHEM BUILD FOR openmpi ===== 1949s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 1949s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 1949s 1949s 1949s Running tests/dft_he2+/dft_he2+ 1949s 1949s cleaning scratch 1949s copying input and verified output files 1949s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1949s 1982s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1982s OK 1982s 1982s Running tests/qmmm_grad0/qmmm_grad0 1982s 1982s cleaning scratch 1982s copying input and verified output files 1982s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1982s 1987s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1987s OK 1987s 1987s Running tests/auh2o/auh2o 1987s 1987s cleaning scratch 1987s copying input and verified output files 1987s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1987s 1990s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1990s OK 1990s 1990s Running tests/autosym/autosym 1990s 1990s cleaning scratch 1990s copying input and verified output files 1990s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1990s 2019s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2019s OK 2019s 2019s Running tests/h2mp2/h2mp2 2019s 2019s cleaning scratch 2019s copying input and verified output files 2019s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2019s 2024s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2024s OK 2024s 2024s Running tests/h2o/h2o 2024s 2024s cleaning scratch 2024s copying input and verified output files 2024s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2024s 2026s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2026s OK 2026s 2026s Running tests/hess_h2o/hess_h2o 2026s 2026s cleaning scratch 2026s copying input and verified output files 2026s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2026s 2040s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2040s OK 2040s 2040s Running tests/prop_h2o/prop_h2o 2040s 2040s cleaning scratch 2040s copying input and verified output files 2040s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2040s 2047s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2047s OK 2047s 2047s Running tests/geom_zmatrix/geom_zmatrix 2047s 2047s cleaning scratch 2047s copying input and verified output files 2047s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2047s 2053s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2053s OK 2053s 2053s Running tests/rimp2_ne/rimp2_ne 2053s 2053s cleaning scratch 2053s copying input and verified output files 2053s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2053s 2058s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2058s OK 2058s 2058s Running tests/small_intchk/small_intchk 2058s 2058s cleaning scratch 2058s copying input and verified output files 2058s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2058s 2067s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2067s OK 2067s 2067s Running tests/tagcheck/tagcheck 2067s 2067s cleaning scratch 2067s copying input and verified output files 2067s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2067s 2072s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2072s OK 2072s 2072s Running tests/testtab/testtab 2072s 2072s cleaning scratch 2072s copying input and verified output files 2072s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2072s 2073s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2073s OK 2073s 2073s Running tests/h2o_dk/h2o_dk 2073s 2073s cleaning scratch 2073s copying input and verified output files 2074s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2074s 2080s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2080s OK 2080s 2080s Running tests/cosmo_h2o/cosmo_h2o 2080s 2080s cleaning scratch 2080s copying input and verified output files 2080s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2080s 2084s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2084s OK 2084s 2084s Running tests/ch5n_nbo/ch5n_nbo 2084s 2084s cleaning scratch 2084s copying input and verified output files 2084s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2084s 2085s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2085s OK 2085s 2085s Running tests/h2s_finite/h2s_finite 2085s 2085s cleaning scratch 2085s copying input and verified output files 2085s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2085s 2091s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2091s OK 2091s 2091s Running tests/pyqa3/pyqa3 2091s 2091s cleaning scratch 2091s copying input and verified output files 2091s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2091s 2099s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2099s OK 2099s 2099s Running tests/startag/startag 2099s 2099s cleaning scratch 2099s copying input and verified output files 2099s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2099s 2102s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2102s OK 2102s 2102s Running tests/esp/esp 2102s 2102s cleaning scratch 2102s copying input and verified output files 2102s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2102s 2105s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2105s ESP charges match 2105s 2105s 2105s Running tests/esp_uhf/esp_uhf 2105s 2105s cleaning scratch 2105s copying input and verified output files 2105s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2105s 2110s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2110s ESP charges match 2110s 2110s 2110s Running tests/dft_bsse/dft_bsse 2110s 2110s cleaning scratch 2110s copying input and verified output files 2110s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2110s 2116s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2116s OK 2116s 2116s Running tests/dplot_dft/dplot_dft 2116s 2116s cleaning scratch 2116s copying input and verified output files 2116s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2116s 2118s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2118s OK 2118s 2118s Running tests/dft_meta/dft_meta 2118s 2118s cleaning scratch 2118s copying input and verified output files 2118s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2118s 2175s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2175s OK 2175s 2175s Running tests/dft_mpwb1khf/dft_mpwb1khf 2175s 2175s cleaning scratch 2175s copying input and verified output files 2175s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2175s 2183s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2183s OK 2183s 2183s Running tests/prop_uhf_h2o/prop_uhf_h2o 2183s 2183s cleaning scratch 2183s copying input and verified output files 2183s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2183s 2226s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2226s OK 2226s 2226s Running tests/et_zn_dimer/et_zn_dimer 2226s 2226s cleaning scratch 2226s copying input and verified output files 2226s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2226s 2262s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2262s OK 2262s 2262s Running tests/vectors_rotate/vectors_rotate 2262s 2262s cleaning scratch 2262s copying input and verified output files 2262s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2262s 2266s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2266s OK 2266s 2266s Running tests/sad_ch3hf/sad_ch3hf 2266s 2266s cleaning scratch 2266s copying input and verified output files 2266s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2266s 2299s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2299s OK 2299s 2299s Running tests/band/band 2299s 2299s cleaning scratch 2299s copying input and verified output files 2299s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2299s 2307s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2307s OK 2307s 2307s Running tests/pspw/pspw 2307s 2307s cleaning scratch 2307s copying input and verified output files 2307s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2307s 2321s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2321s OK 2321s 2321s Running tests/pspw_stress/pspw_stress 2321s 2321s cleaning scratch 2321s copying input and verified output files 2321s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2321s 2340s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2340s OK 2340s 2340s Running tests/mcscf_ch2/mcscf_ch2 2340s 2340s cleaning scratch 2340s copying input and verified output files 2340s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2340s 2404s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2404s OK 2404s 2404s Running tests/dft_li2freq/dft_li2freq 2404s 2404s cleaning scratch 2404s copying input and verified output files 2404s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2404s 2468s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2468s OK 2468s 2468s Running tests/n2_ccsd/n2_ccsd 2468s 2468s cleaning scratch 2468s copying input and verified output files 2468s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2468s 2528s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2528s OK 2528s 2528s Running tests/tce_ccsd_t_h2o/tce_ccsd_t_h2o 2528s 2528s cleaning scratch 2528s copying input and verified output files 2528s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2528s 2533s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2533s OK 2533s 2533s Running tests/tddft_h2o/tddft_h2o 2533s 2533s cleaning scratch 2533s copying input and verified output files 2533s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2533s 2575s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2575s OK 2575s 2575s Running tests/rt_tddft_dimer_charge/rt_tddft_dimer_charge 2575s 2575s cleaning scratch 2575s copying input and verified output files 2575s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2575s 3187s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3187s OK 3187s 3187s Running tests/tce_eaccsd_ozone/tce_eaccsd_ozone 3187s 3187s cleaning scratch 3187s copying input and verified output files 3187s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 3187s 3203s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3203s OK 3203s 3203s Running tests/tce_ipccsd_f2/tce_ipccsd_f2 3203s 3203s cleaning scratch 3203s copying input and verified output files 3203s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 3203s 3207s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3207s OK 3207s 3207s Running tests/tce_hyperpolar_ccsd_small/tce_hyperpolar_ccsd_small 3207s 3207s cleaning scratch 3207s copying input and verified output files 3207s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 3207s 3276s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3276s OK 3276s 3276s Running tests/mp2_scs_n2/mp2_scs_n2 3276s 3276s cleaning scratch 3276s copying input and verified output files 3276s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 3276s 3298s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3298s OK 3298s 3298s Running tests/tddftgrad_n2_uks/tddftgrad_n2_uks 3298s 3298s cleaning scratch 3298s copying input and verified output files 3298s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 3298s 3346s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3346s OK 3346s 3346s Running tests/tddftgrad_ch2o/tddftgrad_ch2o 3346s 3346s cleaning scratch 3346s copying input and verified output files 3346s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 3346s 3359s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3359s OK 3359s 3359s Running tests/water/water_md 3359s 3359s cleaning scratch 3359s copying input and verified output files 3359s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 3359s 3360s verifying nwout ...... skipped 3360s verifying test ....... completed 3360s 3360s Running tests/water/water_pme 3360s 3360s cleaning scratch 3360s copying input and verified output files 3360s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 3360s 3360s verifying nwout ...... skipped 3360s verifying test ....... completed 3360s 3360s Running tests/pspw_md/pspw_md 3360s 3360s cleaning scratch 3360s copying input and verified output files 3360s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 3360s 3378s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3378s OK 3378s 3378s Running tests/cosmo_h3co/cosmo_h3co 3378s 3378s cleaning scratch 3378s copying input and verified output files 3378s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 3378s 3396s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3396s OK 3396s 3396s OK 3396s autopkgtest [21:45:55]: test testsuite-openmpi: -----------------------] 3396s testsuite-openmpi PASS 3396s autopkgtest [21:45:55]: test testsuite-openmpi: - - - - - - - - - - results - - - - - - - - - - 3397s autopkgtest [21:45:56]: test testsuite-mpich: preparing testbed 3470s autopkgtest [21:47:09]: testbed dpkg architecture: arm64 3470s autopkgtest [21:47:09]: testbed apt version: 3.0.0 3470s autopkgtest [21:47:09]: @@@@@@@@@@@@@@@@@@@@ test bed setup 3471s autopkgtest [21:47:10]: testbed release detected to be: questing 3471s autopkgtest [21:47:10]: updating testbed package index (apt update) 3471s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB] 3471s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 3471s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 3471s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 3471s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [167 kB] 3472s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [1968 kB] 3472s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [43.1 kB] 3472s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 Packages [220 kB] 3472s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 Packages [1473 kB] 3472s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse arm64 Packages [14.3 kB] 3472s Fetched 3997 kB in 1s (7607 kB/s) 3473s Reading package lists... 3473s autopkgtest [21:47:12]: upgrading testbed (apt dist-upgrade and autopurge) 3473s Reading package lists... 3474s Building dependency tree... 3474s Reading state information... 3474s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 3474s Starting 2 pkgProblemResolver with broken count: 0 3474s Done 3475s Entering ResolveByKeep 3475s 3475s Calculating upgrade... 3476s The following packages will be upgraded: 3476s libperl5.40 libpython3.13 libpython3.13-minimal libpython3.13-stdlib perl 3476s perl-base perl-modules-5.40 python3.13 python3.13-gdbm python3.13-minimal 3476s 10 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 3476s Need to get 18.3 MB of archives. 3476s After this operation, 0 B of additional disk space will be used. 3476s Get:1 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libperl5.40 arm64 5.40.1-3 [4780 kB] 3476s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 perl arm64 5.40.1-3 [262 kB] 3476s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 perl-base arm64 5.40.1-3 [1786 kB] 3476s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 perl-modules-5.40 all 5.40.1-3 [3217 kB] 3476s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 python3.13 arm64 3.13.3-2 [739 kB] 3476s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libpython3.13 arm64 3.13.3-2 [2281 kB] 3477s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libpython3.13-stdlib arm64 3.13.3-2 [2038 kB] 3477s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 python3.13-minimal arm64 3.13.3-2 [2273 kB] 3477s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 libpython3.13-minimal arm64 3.13.3-2 [881 kB] 3477s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 python3.13-gdbm arm64 3.13.3-2 [31.5 kB] 3477s Fetched 18.3 MB in 1s (17.7 MB/s) 3477s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 85225 files and directories currently installed.) 3477s Preparing to unpack .../libperl5.40_5.40.1-3_arm64.deb ... 3477s Unpacking libperl5.40:arm64 (5.40.1-3) over (5.40.1-2ubuntu0.1) ... 3478s Preparing to unpack .../perl_5.40.1-3_arm64.deb ... 3478s Unpacking perl (5.40.1-3) over (5.40.1-2ubuntu0.1) ... 3478s Preparing to unpack .../perl-base_5.40.1-3_arm64.deb ... 3478s Unpacking perl-base (5.40.1-3) over (5.40.1-2ubuntu0.1) ... 3478s Setting up perl-base (5.40.1-3) ... 3478s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 85225 files and directories currently installed.) 3478s Preparing to unpack .../0-perl-modules-5.40_5.40.1-3_all.deb ... 3478s Unpacking perl-modules-5.40 (5.40.1-3) over (5.40.1-2ubuntu0.1) ... 3478s Preparing to unpack .../1-python3.13_3.13.3-2_arm64.deb ... 3478s Unpacking python3.13 (3.13.3-2) over (3.13.3-1) ... 3478s Preparing to unpack .../2-libpython3.13_3.13.3-2_arm64.deb ... 3478s Unpacking libpython3.13:arm64 (3.13.3-2) over (3.13.3-1) ... 3478s Preparing to unpack .../3-libpython3.13-stdlib_3.13.3-2_arm64.deb ... 3478s Unpacking libpython3.13-stdlib:arm64 (3.13.3-2) over (3.13.3-1) ... 3478s Preparing to unpack .../4-python3.13-minimal_3.13.3-2_arm64.deb ... 3478s Unpacking python3.13-minimal (3.13.3-2) over (3.13.3-1) ... 3478s Preparing to unpack .../5-libpython3.13-minimal_3.13.3-2_arm64.deb ... 3479s Unpacking libpython3.13-minimal:arm64 (3.13.3-2) over (3.13.3-1) ... 3479s Preparing to unpack .../6-python3.13-gdbm_3.13.3-2_arm64.deb ... 3479s Unpacking python3.13-gdbm (3.13.3-2) over (3.13.3-1) ... 3479s Setting up libpython3.13-minimal:arm64 (3.13.3-2) ... 3479s Setting up perl-modules-5.40 (5.40.1-3) ... 3479s Setting up python3.13-minimal (3.13.3-2) ... 3479s Setting up libpython3.13-stdlib:arm64 (3.13.3-2) ... 3479s Setting up python3.13-gdbm (3.13.3-2) ... 3479s Setting up libpython3.13:arm64 (3.13.3-2) ... 3479s Setting up python3.13 (3.13.3-2) ... 3480s Setting up libperl5.40:arm64 (5.40.1-3) ... 3480s Setting up perl (5.40.1-3) ... 3480s Processing triggers for systemd (257.4-1ubuntu3) ... 3480s Processing triggers for man-db (2.13.0-1) ... 3481s Processing triggers for libc-bin (2.41-6ubuntu1) ... 3481s Reading package lists... 3481s Building dependency tree... 3481s Reading state information... 3482s Starting pkgProblemResolver with broken count: 0 3482s Starting 2 pkgProblemResolver with broken count: 0 3482s Done 3482s Solving dependencies... 3482s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 3485s Reading package lists... 3485s Building dependency tree... 3485s Reading state information... 3485s Starting pkgProblemResolver with broken count: 0 3485s Starting 2 pkgProblemResolver with broken count: 0 3485s Done 3486s The following NEW packages will be installed: 3486s hwloc-nox libamd-comgr2 libamdhip64-5 libblas3 libevent-pthreads-2.1-7t64 3486s libfabric1 libgfortran5 libgomp1 libhsa-runtime64-1 libhsakmt1 3486s libhwloc-plugins libhwloc15 libibmad5 libibumad3 liblapack3 libllvm17t64 3486s libmpich12 libmunge2 libopenmpi40 libpciaccess0 libpmix2t64 librdmacm1t64 3486s libscalapack-mpich2.2 libslurm42t64 libucx0 libxnvctrl0 mpi-default-bin 3486s mpich nwchem-data nwchem-mpich ocl-icd-libopencl1 openmpi-bin openmpi-common 3486s 0 upgraded, 33 newly installed, 0 to remove and 0 not upgraded. 3486s Need to get 81.6 MB of archives. 3486s After this operation, 367 MB of additional disk space will be used. 3486s Get:1 http://ftpmaster.internal/ubuntu questing/universe arm64 libllvm17t64 arm64 1:17.0.6-21 [24.9 MB] 3487s Get:2 http://ftpmaster.internal/ubuntu questing/universe arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3build2 [14.1 MB] 3487s Get:3 http://ftpmaster.internal/ubuntu questing/universe arm64 libhsakmt1 arm64 5.7.0-1build1 [63.6 kB] 3487s Get:4 http://ftpmaster.internal/ubuntu questing/universe arm64 libhsa-runtime64-1 arm64 5.7.1-2build1 [286 kB] 3487s Get:5 http://ftpmaster.internal/ubuntu questing/universe arm64 libamdhip64-5 arm64 5.7.1-5build1 [9707 kB] 3487s Get:6 http://ftpmaster.internal/ubuntu questing/main arm64 libblas3 arm64 3.12.1-2 [161 kB] 3487s Get:7 http://ftpmaster.internal/ubuntu questing/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.12-stable-10 [7922 B] 3487s Get:8 http://ftpmaster.internal/ubuntu questing/main arm64 librdmacm1t64 arm64 56.0-4ubuntu1 [71.4 kB] 3487s Get:9 http://ftpmaster.internal/ubuntu questing/universe arm64 libfabric1 arm64 1.17.0-3.1 [542 kB] 3487s Get:10 http://ftpmaster.internal/ubuntu questing/main arm64 libgfortran5 arm64 15-20250404-0ubuntu1 [444 kB] 3487s Get:11 http://ftpmaster.internal/ubuntu questing/main arm64 libgomp1 arm64 15-20250404-0ubuntu1 [147 kB] 3487s Get:12 http://ftpmaster.internal/ubuntu questing/universe arm64 libhwloc15 arm64 2.12.0-1 [162 kB] 3487s Get:13 http://ftpmaster.internal/ubuntu questing/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB] 3487s Get:14 http://ftpmaster.internal/ubuntu questing/universe arm64 libmunge2 arm64 0.5.16-1 [15.2 kB] 3487s Get:15 http://ftpmaster.internal/ubuntu questing/main arm64 libpciaccess0 arm64 0.17-3build1 [18.9 kB] 3487s Get:16 http://ftpmaster.internal/ubuntu questing/main arm64 libxnvctrl0 arm64 510.47.03-0ubuntu4 [12.4 kB] 3487s Get:17 http://ftpmaster.internal/ubuntu questing/universe arm64 ocl-icd-libopencl1 arm64 2.3.2-1build1 [37.6 kB] 3487s Get:18 http://ftpmaster.internal/ubuntu questing/universe arm64 libhwloc-plugins arm64 2.12.0-1 [15.9 kB] 3487s Get:19 http://ftpmaster.internal/ubuntu questing/universe arm64 libpmix2t64 arm64 5.0.6-5 [666 kB] 3487s Get:20 http://ftpmaster.internal/ubuntu questing/main arm64 libibumad3 arm64 56.0-4ubuntu1 [31.3 kB] 3487s Get:21 http://ftpmaster.internal/ubuntu questing/main arm64 libibmad5 arm64 56.0-4ubuntu1 [44.1 kB] 3487s Get:22 http://ftpmaster.internal/ubuntu questing/universe arm64 libucx0 arm64 1.18.1+ds-2 [1161 kB] 3487s Get:23 http://ftpmaster.internal/ubuntu questing/universe arm64 libopenmpi40 arm64 5.0.7-1 [2419 kB] 3487s Get:24 http://ftpmaster.internal/ubuntu questing/universe arm64 openmpi-common all 5.0.7-1 [97.9 kB] 3487s Get:25 http://ftpmaster.internal/ubuntu questing/universe arm64 openmpi-bin arm64 5.0.7-1 [195 kB] 3487s Get:26 http://ftpmaster.internal/ubuntu questing/universe arm64 mpi-default-bin arm64 1.18 [2510 B] 3487s Get:27 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 libmpich12 arm64 4.3.0-5 [2193 kB] 3487s Get:28 http://ftpmaster.internal/ubuntu questing/universe arm64 libscalapack-mpich2.2 arm64 2.2.2-1ubuntu1 [1648 kB] 3487s Get:29 http://ftpmaster.internal/ubuntu questing/universe arm64 libslurm42t64 arm64 24.11.3-2 [566 kB] 3488s Get:30 http://ftpmaster.internal/ubuntu questing/universe arm64 nwchem-data all 7.2.3-7build1 [6076 kB] 3488s Get:31 http://ftpmaster.internal/ubuntu questing/universe arm64 hwloc-nox arm64 2.12.0-1 [217 kB] 3488s Get:32 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 mpich arm64 4.3.0-5 [186 kB] 3488s Get:33 http://ftpmaster.internal/ubuntu questing/universe arm64 nwchem-mpich arm64 7.2.3-7build1 [13.1 MB] 3488s Fetched 81.6 MB in 2s (45.4 MB/s) 3488s Selecting previously unselected package libllvm17t64:arm64. 3488s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 85225 files and directories currently installed.) 3488s Preparing to unpack .../00-libllvm17t64_1%3a17.0.6-21_arm64.deb ... 3488s Unpacking libllvm17t64:arm64 (1:17.0.6-21) ... 3489s Selecting previously unselected package libamd-comgr2:arm64. 3489s Preparing to unpack .../01-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3build2_arm64.deb ... 3489s Unpacking libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3build2) ... 3489s Selecting previously unselected package libhsakmt1:arm64. 3489s Preparing to unpack .../02-libhsakmt1_5.7.0-1build1_arm64.deb ... 3489s Unpacking libhsakmt1:arm64 (5.7.0-1build1) ... 3489s Selecting previously unselected package libhsa-runtime64-1. 3489s Preparing to unpack .../03-libhsa-runtime64-1_5.7.1-2build1_arm64.deb ... 3489s Unpacking libhsa-runtime64-1 (5.7.1-2build1) ... 3489s Selecting previously unselected package libamdhip64-5. 3489s Preparing to unpack .../04-libamdhip64-5_5.7.1-5build1_arm64.deb ... 3489s Unpacking libamdhip64-5 (5.7.1-5build1) ... 3489s Selecting previously unselected package libblas3:arm64. 3489s Preparing to unpack .../05-libblas3_3.12.1-2_arm64.deb ... 3489s Unpacking libblas3:arm64 (3.12.1-2) ... 3489s Selecting previously unselected package libevent-pthreads-2.1-7t64:arm64. 3489s Preparing to unpack .../06-libevent-pthreads-2.1-7t64_2.1.12-stable-10_arm64.deb ... 3489s Unpacking libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10) ... 3489s Selecting previously unselected package librdmacm1t64:arm64. 3489s Preparing to unpack .../07-librdmacm1t64_56.0-4ubuntu1_arm64.deb ... 3489s Unpacking librdmacm1t64:arm64 (56.0-4ubuntu1) ... 3489s Selecting previously unselected package libfabric1:arm64. 3489s Preparing to unpack .../08-libfabric1_1.17.0-3.1_arm64.deb ... 3489s Unpacking libfabric1:arm64 (1.17.0-3.1) ... 3489s Selecting previously unselected package libgfortran5:arm64. 3489s Preparing to unpack .../09-libgfortran5_15-20250404-0ubuntu1_arm64.deb ... 3489s Unpacking libgfortran5:arm64 (15-20250404-0ubuntu1) ... 3490s Selecting previously unselected package libgomp1:arm64. 3490s Preparing to unpack .../10-libgomp1_15-20250404-0ubuntu1_arm64.deb ... 3490s Unpacking libgomp1:arm64 (15-20250404-0ubuntu1) ... 3490s Selecting previously unselected package libhwloc15:arm64. 3490s Preparing to unpack .../11-libhwloc15_2.12.0-1_arm64.deb ... 3490s Unpacking libhwloc15:arm64 (2.12.0-1) ... 3490s Selecting previously unselected package liblapack3:arm64. 3490s Preparing to unpack .../12-liblapack3_3.12.1-2_arm64.deb ... 3490s Unpacking liblapack3:arm64 (3.12.1-2) ... 3490s Selecting previously unselected package libmunge2:arm64. 3490s Preparing to unpack .../13-libmunge2_0.5.16-1_arm64.deb ... 3490s Unpacking libmunge2:arm64 (0.5.16-1) ... 3490s Selecting previously unselected package libpciaccess0:arm64. 3490s Preparing to unpack .../14-libpciaccess0_0.17-3build1_arm64.deb ... 3490s Unpacking libpciaccess0:arm64 (0.17-3build1) ... 3490s Selecting previously unselected package libxnvctrl0:arm64. 3490s Preparing to unpack .../15-libxnvctrl0_510.47.03-0ubuntu4_arm64.deb ... 3490s Unpacking libxnvctrl0:arm64 (510.47.03-0ubuntu4) ... 3490s Selecting previously unselected package ocl-icd-libopencl1:arm64. 3490s Preparing to unpack .../16-ocl-icd-libopencl1_2.3.2-1build1_arm64.deb ... 3490s Unpacking ocl-icd-libopencl1:arm64 (2.3.2-1build1) ... 3490s Selecting previously unselected package libhwloc-plugins:arm64. 3490s Preparing to unpack .../17-libhwloc-plugins_2.12.0-1_arm64.deb ... 3490s Unpacking libhwloc-plugins:arm64 (2.12.0-1) ... 3490s Selecting previously unselected package libpmix2t64:arm64. 3490s Preparing to unpack .../18-libpmix2t64_5.0.6-5_arm64.deb ... 3490s Unpacking libpmix2t64:arm64 (5.0.6-5) ... 3490s Selecting previously unselected package libibumad3:arm64. 3490s Preparing to unpack .../19-libibumad3_56.0-4ubuntu1_arm64.deb ... 3490s Unpacking libibumad3:arm64 (56.0-4ubuntu1) ... 3490s Selecting previously unselected package libibmad5:arm64. 3490s Preparing to unpack .../20-libibmad5_56.0-4ubuntu1_arm64.deb ... 3490s Unpacking libibmad5:arm64 (56.0-4ubuntu1) ... 3490s Selecting previously unselected package libucx0:arm64. 3490s Preparing to unpack .../21-libucx0_1.18.1+ds-2_arm64.deb ... 3490s Unpacking libucx0:arm64 (1.18.1+ds-2) ... 3490s Selecting previously unselected package libopenmpi40:arm64. 3490s Preparing to unpack .../22-libopenmpi40_5.0.7-1_arm64.deb ... 3490s Unpacking libopenmpi40:arm64 (5.0.7-1) ... 3490s Selecting previously unselected package openmpi-common. 3490s Preparing to unpack .../23-openmpi-common_5.0.7-1_all.deb ... 3490s Unpacking openmpi-common (5.0.7-1) ... 3490s Selecting previously unselected package openmpi-bin. 3490s Preparing to unpack .../24-openmpi-bin_5.0.7-1_arm64.deb ... 3490s Unpacking openmpi-bin (5.0.7-1) ... 3490s Selecting previously unselected package mpi-default-bin. 3490s Preparing to unpack .../25-mpi-default-bin_1.18_arm64.deb ... 3490s Unpacking mpi-default-bin (1.18) ... 3490s Selecting previously unselected package libmpich12:arm64. 3490s Preparing to unpack .../26-libmpich12_4.3.0-5_arm64.deb ... 3490s Unpacking libmpich12:arm64 (4.3.0-5) ... 3490s Selecting previously unselected package libscalapack-mpich2.2:arm64. 3490s Preparing to unpack .../27-libscalapack-mpich2.2_2.2.2-1ubuntu1_arm64.deb ... 3490s Unpacking libscalapack-mpich2.2:arm64 (2.2.2-1ubuntu1) ... 3490s Selecting previously unselected package libslurm42t64. 3490s Preparing to unpack .../28-libslurm42t64_24.11.3-2_arm64.deb ... 3490s Unpacking libslurm42t64 (24.11.3-2) ... 3490s Selecting previously unselected package nwchem-data. 3490s Preparing to unpack .../29-nwchem-data_7.2.3-7build1_all.deb ... 3490s Unpacking nwchem-data (7.2.3-7build1) ... 3491s Selecting previously unselected package hwloc-nox. 3491s Preparing to unpack .../30-hwloc-nox_2.12.0-1_arm64.deb ... 3491s Unpacking hwloc-nox (2.12.0-1) ... 3491s Selecting previously unselected package mpich. 3491s Preparing to unpack .../31-mpich_4.3.0-5_arm64.deb ... 3491s Unpacking mpich (4.3.0-5) ... 3491s Selecting previously unselected package nwchem-mpich. 3491s Preparing to unpack .../32-nwchem-mpich_7.2.3-7build1_arm64.deb ... 3491s Unpacking nwchem-mpich (7.2.3-7build1) ... 3491s Setting up libpciaccess0:arm64 (0.17-3build1) ... 3491s Setting up libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10) ... 3491s Setting up nwchem-data (7.2.3-7build1) ... 3491s Setting up libibumad3:arm64 (56.0-4ubuntu1) ... 3491s Setting up libibmad5:arm64 (56.0-4ubuntu1) ... 3491s Setting up libgomp1:arm64 (15-20250404-0ubuntu1) ... 3491s Setting up libxnvctrl0:arm64 (510.47.03-0ubuntu4) ... 3491s Setting up libblas3:arm64 (3.12.1-2) ... 3491s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 3491s Setting up libmunge2:arm64 (0.5.16-1) ... 3491s Setting up libllvm17t64:arm64 (1:17.0.6-21) ... 3491s Setting up libslurm42t64 (24.11.3-2) ... 3491s Setting up libhwloc15:arm64 (2.12.0-1) ... 3491s Setting up libgfortran5:arm64 (15-20250404-0ubuntu1) ... 3491s Setting up ocl-icd-libopencl1:arm64 (2.3.2-1build1) ... 3491s Setting up openmpi-common (5.0.7-1) ... 3491s Setting up librdmacm1t64:arm64 (56.0-4ubuntu1) ... 3491s Setting up libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3build2) ... 3491s Setting up libhsakmt1:arm64 (5.7.0-1build1) ... 3491s Setting up libfabric1:arm64 (1.17.0-3.1) ... 3491s Setting up liblapack3:arm64 (3.12.1-2) ... 3491s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 3491s Setting up hwloc-nox (2.12.0-1) ... 3491s Setting up libhwloc-plugins:arm64 (2.12.0-1) ... 3491s Setting up libpmix2t64:arm64 (5.0.6-5) ... 3491s Setting up libhsa-runtime64-1 (5.7.1-2build1) ... 3491s Setting up libamdhip64-5 (5.7.1-5build1) ... 3491s Setting up libucx0:arm64 (1.18.1+ds-2) ... 3491s Setting up libmpich12:arm64 (4.3.0-5) ... 3491s Setting up libopenmpi40:arm64 (5.0.7-1) ... 3491s Setting up mpich (4.3.0-5) ... 3491s update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode 3491s update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode 3491s Setting up openmpi-bin (5.0.7-1) ... 3491s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 3491s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 3491s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 3491s Setting up mpi-default-bin (1.18) ... 3491s Setting up libscalapack-mpich2.2:arm64 (2.2.2-1ubuntu1) ... 3491s Setting up nwchem-mpich (7.2.3-7build1) ... 3491s Processing triggers for libc-bin (2.41-6ubuntu1) ... 3491s Processing triggers for man-db (2.13.0-1) ... 3612s autopkgtest [21:49:31]: test testsuite-mpich: [----------------------- 3612s ===== TESTING NWCHEM BUILD FOR mpich ===== 3612s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 3612s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 3612s 3612s 3612s Running tests/dft_he2+/dft_he2+ 3612s 3612s cleaning scratch 3612s copying input and verified output files 3612s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3612s 3646s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3646s OK 3646s 3646s Running tests/qmmm_grad0/qmmm_grad0 3646s 3646s cleaning scratch 3646s copying input and verified output files 3646s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3646s 3652s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3652s OK 3652s 3652s Running tests/auh2o/auh2o 3652s 3652s cleaning scratch 3652s copying input and verified output files 3652s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3652s 3655s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3655s OK 3655s 3655s Running tests/autosym/autosym 3655s 3655s cleaning scratch 3655s copying input and verified output files 3655s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3655s 3685s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3685s OK 3685s 3685s Running tests/h2mp2/h2mp2 3685s 3685s cleaning scratch 3685s copying input and verified output files 3685s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3685s 3690s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3690s OK 3690s 3690s Running tests/h2o/h2o 3690s 3690s cleaning scratch 3690s copying input and verified output files 3690s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3690s 3692s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3692s OK 3692s 3692s Running tests/hess_h2o/hess_h2o 3692s 3692s cleaning scratch 3692s copying input and verified output files 3692s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3692s 3706s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3706s OK 3706s 3706s Running tests/prop_h2o/prop_h2o 3706s 3706s cleaning scratch 3706s copying input and verified output files 3706s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3706s 3714s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3714s OK 3714s 3714s Running tests/geom_zmatrix/geom_zmatrix 3714s 3714s cleaning scratch 3714s copying input and verified output files 3714s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3714s 3720s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3720s OK 3720s 3720s Running tests/rimp2_ne/rimp2_ne 3720s 3720s cleaning scratch 3720s copying input and verified output files 3720s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3720s 3725s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3725s OK 3725s 3725s Running tests/small_intchk/small_intchk 3725s 3725s cleaning scratch 3725s copying input and verified output files 3725s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3725s 3734s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3734s OK 3734s 3734s Running tests/tagcheck/tagcheck 3734s 3734s cleaning scratch 3734s copying input and verified output files 3734s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3734s 3739s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3739s OK 3739s 3739s Running tests/testtab/testtab 3739s 3739s cleaning scratch 3739s copying input and verified output files 3739s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3739s 3740s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3740s OK 3740s 3740s Running tests/h2o_dk/h2o_dk 3740s 3740s cleaning scratch 3740s copying input and verified output files 3740s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3740s 3750s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3750s OK 3750s 3750s Running tests/cosmo_h2o/cosmo_h2o 3750s 3750s cleaning scratch 3750s copying input and verified output files 3750s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3750s 3754s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3754s OK 3754s 3754s Running tests/ch5n_nbo/ch5n_nbo 3754s 3754s cleaning scratch 3754s copying input and verified output files 3754s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3754s 3755s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3755s OK 3755s 3755s Running tests/h2s_finite/h2s_finite 3755s 3755s cleaning scratch 3755s copying input and verified output files 3755s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3755s 3761s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3761s OK 3761s 3761s Running tests/pyqa3/pyqa3 3761s 3761s cleaning scratch 3761s copying input and verified output files 3761s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3761s 3769s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3769s OK 3769s 3769s Running tests/startag/startag 3769s 3769s cleaning scratch 3769s copying input and verified output files 3769s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3769s 3772s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3772s OK 3772s 3772s Running tests/esp/esp 3772s 3772s cleaning scratch 3772s copying input and verified output files 3772s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3772s 3775s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3775s ESP charges match 3775s 3775s 3775s Running tests/esp_uhf/esp_uhf 3775s 3775s cleaning scratch 3775s copying input and verified output files 3775s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3775s 3780s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3780s ESP charges match 3781s 3781s 3781s Running tests/dft_bsse/dft_bsse 3781s 3781s cleaning scratch 3781s copying input and verified output files 3781s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3781s 3787s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3787s OK 3787s 3787s Running tests/dplot_dft/dplot_dft 3787s 3787s cleaning scratch 3787s copying input and verified output files 3787s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3787s 3789s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3789s OK 3789s 3789s Running tests/dft_meta/dft_meta 3789s 3789s cleaning scratch 3789s copying input and verified output files 3789s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3789s 3849s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3849s OK 3849s 3849s Running tests/dft_mpwb1khf/dft_mpwb1khf 3849s 3849s cleaning scratch 3849s copying input and verified output files 3849s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3849s 3858s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3858s OK 3858s 3858s Running tests/prop_uhf_h2o/prop_uhf_h2o 3858s 3858s cleaning scratch 3858s copying input and verified output files 3858s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3858s 3902s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3902s OK 3902s 3902s Running tests/et_zn_dimer/et_zn_dimer 3902s 3902s cleaning scratch 3902s copying input and verified output files 3902s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3902s 3939s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3939s OK 3939s 3939s Running tests/vectors_rotate/vectors_rotate 3939s 3939s cleaning scratch 3939s copying input and verified output files 3939s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3939s 3944s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3944s OK 3944s 3944s Running tests/sad_ch3hf/sad_ch3hf 3944s 3944s cleaning scratch 3944s copying input and verified output files 3944s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3944s 3979s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3979s OK 3979s 3979s Running tests/band/band 3979s 3979s cleaning scratch 3979s copying input and verified output files 3979s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3979s 3986s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 3986s OK 3986s 3986s Running tests/pspw/pspw 3986s 3986s cleaning scratch 3986s copying input and verified output files 3986s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 3986s 4001s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 4001s OK 4001s 4001s Running tests/pspw_stress/pspw_stress 4001s 4001s cleaning scratch 4001s copying input and verified output files 4001s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 4001s 4019s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 4019s OK 4019s 4019s Running tests/mcscf_ch2/mcscf_ch2 4019s 4019s cleaning scratch 4019s copying input and verified output files 4019s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 4019s 4086s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 4086s OK 4086s 4086s Running tests/dft_li2freq/dft_li2freq 4086s 4086s cleaning scratch 4086s copying input and verified output files 4086s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 4086s 4151s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 4151s OK 4151s 4151s Running tests/n2_ccsd/n2_ccsd 4151s 4151s cleaning scratch 4151s copying input and verified output files 4151s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 4151s 4219s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 4219s OK 4219s 4219s Running tests/tce_ccsd_t_h2o/tce_ccsd_t_h2o 4219s 4219s cleaning scratch 4219s copying input and verified output files 4219s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 4219s 4225s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 4225s OK 4225s 4225s Running tests/tddft_h2o/tddft_h2o 4225s 4225s cleaning scratch 4225s copying input and verified output files 4225s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 4225s 4272s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 4272s OK 4272s 4272s Running tests/rt_tddft_dimer_charge/rt_tddft_dimer_charge 4272s 4272s cleaning scratch 4272s copying input and verified output files 4272s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 4272s 4921s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 4921s OK 4921s 4921s Running tests/tce_eaccsd_ozone/tce_eaccsd_ozone 4921s 4921s cleaning scratch 4921s copying input and verified output files 4921s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 4921s 4939s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 4939s OK 4939s 4939s Running tests/tce_ipccsd_f2/tce_ipccsd_f2 4939s 4939s cleaning scratch 4939s copying input and verified output files 4939s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 4939s 4944s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 4944s OK 4944s 4944s Running tests/tce_hyperpolar_ccsd_small/tce_hyperpolar_ccsd_small 4944s 4944s cleaning scratch 4944s copying input and verified output files 4944s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 4944s 5078s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 5078s OK 5078s 5078s Running tests/mp2_scs_n2/mp2_scs_n2 5078s 5078s cleaning scratch 5078s copying input and verified output files 5078s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 5078s 5101s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 5101s OK 5101s 5101s Running tests/tddftgrad_n2_uks/tddftgrad_n2_uks 5101s 5101s cleaning scratch 5101s copying input and verified output files 5101s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 5101s 5150s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 5150s OK 5150s 5150s Running tests/tddftgrad_ch2o/tddftgrad_ch2o 5150s 5150s cleaning scratch 5150s copying input and verified output files 5150s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 5150s 5163s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 5163s OK 5163s 5163s Running tests/water/water_md 5163s 5163s cleaning scratch 5163s copying input and verified output files 5163s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 5163s 5164s verifying nwout ...... skipped 5164s verifying test ....... completed 5164s 5164s Running tests/water/water_pme 5164s 5164s cleaning scratch 5164s copying input and verified output files 5164s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 5164s 5164s verifying nwout ...... skipped 5164s verifying test ....... completed 5164s 5164s Running tests/pspw_md/pspw_md 5164s 5164s cleaning scratch 5164s copying input and verified output files 5164s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 5164s 5181s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 5181s OK 5181s 5181s Running tests/cosmo_h3co/cosmo_h3co 5181s 5181s cleaning scratch 5181s copying input and verified output files 5181s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 5181s 5200s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 5200s OK 5200s 5200s OK 5201s autopkgtest [22:16:00]: test testsuite-mpich: -----------------------] 5201s autopkgtest [22:16:00]: test testsuite-mpich: - - - - - - - - - - results - - - - - - - - - - 5201s testsuite-mpich PASS 5201s autopkgtest [22:16:00]: @@@@@@@@@@@@@@@@@@@@ summary 5201s testsuite.sh PASS 5201s testsuite-openmpi PASS 5201s testsuite-mpich PASS 5205s nova [W] Using flock in prodstack7-arm64 5205s Creating nova instance adt-questing-arm64-nwchem-20250502-204919-juju-7f2275-prod-proposed-migration-environment-15-40bfb3b9-b919-4638-89ea-4080387a58f4 from image adt/ubuntu-questing-arm64-server-20250502.img (UUID 8e5d326b-32f5-49da-83ce-e406e786e537)... 5205s nova [W] Timed out waiting for e2b7876f-375a-403c-b5e2-b63f39c48748 to get deleted. 5205s nova [W] Using flock in prodstack7-arm64 5205s Creating nova instance adt-questing-arm64-nwchem-20250502-204919-juju-7f2275-prod-proposed-migration-environment-15-40bfb3b9-b919-4638-89ea-4080387a58f4 from image adt/ubuntu-questing-arm64-server-20250502.img (UUID 8e5d326b-32f5-49da-83ce-e406e786e537)... 5205s nova [W] Timed out waiting for 052ae471-99df-45fd-b60a-62ed806ad175 to get deleted. 5205s nova [W] Using flock in prodstack7-arm64 5205s Creating nova instance adt-questing-arm64-nwchem-20250502-204919-juju-7f2275-prod-proposed-migration-environment-15-40bfb3b9-b919-4638-89ea-4080387a58f4 from image adt/ubuntu-questing-arm64-server-20250502.img (UUID 8e5d326b-32f5-49da-83ce-e406e786e537)... 5205s nova [W] Timed out waiting for 951f6833-3a27-46c4-b653-4cda913c6238 to get deleted.