0s autopkgtest [10:35:23]: starting date and time: 2025-05-02 10:35:23+0000 0s autopkgtest [10:35:23]: git checkout: 9986aa8c Merge branch 'skia/fix_network_interface' into 'ubuntu/production' 0s autopkgtest [10:35:23]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.dviy998m/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:mpich --apt-upgrade elkcode --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=mpich/4.3.0-5 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-arm64-14.secgroup --name adt-questing-arm64-elkcode-20250502-103523-juju-7f2275-prod-proposed-migration-environment-20-4faf224a-71f6-47c1-b522-fe3109aa348b --image adt/ubuntu-questing-arm64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 119s autopkgtest [10:37:22]: testbed dpkg architecture: arm64 119s autopkgtest [10:37:22]: testbed apt version: 3.0.0 120s autopkgtest [10:37:23]: @@@@@@@@@@@@@@@@@@@@ test bed setup 120s autopkgtest [10:37:23]: testbed release detected to be: None 121s autopkgtest [10:37:24]: updating testbed package index (apt update) 121s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB] 122s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 122s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 122s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 122s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [175 kB] 122s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [44.4 kB] 122s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [2076 kB] 122s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main arm64 Packages [219 kB] 122s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/universe arm64 Packages [1509 kB] 122s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/multiverse arm64 Packages [15.4 kB] 123s Fetched 4149 kB in 1s (3270 kB/s) 123s Reading package lists... 124s autopkgtest [10:37:27]: upgrading testbed (apt dist-upgrade and autopurge) 124s Reading package lists... 125s Building dependency tree... 125s Reading state information... 126s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 126s Starting 2 pkgProblemResolver with broken count: 0 126s Done 127s Entering ResolveByKeep 127s 127s Calculating upgrade... 128s The following packages will be upgraded: 128s htop mtd-utils nano 128s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 128s Need to get 936 kB of archives. 128s After this operation, 727 kB of additional disk space will be used. 128s Get:1 http://ftpmaster.internal/ubuntu questing/main arm64 nano arm64 8.4-1 [290 kB] 128s Get:2 http://ftpmaster.internal/ubuntu questing/main arm64 htop arm64 3.4.1-4 [177 kB] 128s Get:3 http://ftpmaster.internal/ubuntu questing/main arm64 mtd-utils arm64 1:2.3.0-1ubuntu1 [469 kB] 129s Fetched 936 kB in 1s (951 kB/s) 129s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117820 files and directories currently installed.) 129s Preparing to unpack .../archives/nano_8.4-1_arm64.deb ... 129s Unpacking nano (8.4-1) over (8.3-1) ... 130s Preparing to unpack .../htop_3.4.1-4_arm64.deb ... 130s Unpacking htop (3.4.1-4) over (3.4.0-2) ... 130s Preparing to unpack .../mtd-utils_1%3a2.3.0-1ubuntu1_arm64.deb ... 130s Unpacking mtd-utils (1:2.3.0-1ubuntu1) over (1:2.2.0-2ubuntu2) ... 130s Setting up htop (3.4.1-4) ... 130s Setting up mtd-utils (1:2.3.0-1ubuntu1) ... 130s Setting up nano (8.4-1) ... 130s Installing new version of config file /etc/nanorc ... 130s Processing triggers for man-db (2.13.0-1) ... 131s Processing triggers for install-info (7.1.1-1) ... 131s Reading package lists... 132s Building dependency tree... 132s Reading state information... 132s Starting pkgProblemResolver with broken count: 0 132s Starting 2 pkgProblemResolver with broken count: 0 132s Done 133s Solving dependencies... 133s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 136s autopkgtest [10:37:39]: testbed running kernel: Linux 6.14.0-15-generic #15-Ubuntu SMP PREEMPT_DYNAMIC Sun Apr 6 14:37:51 UTC 2025 136s autopkgtest [10:37:39]: @@@@@@@@@@@@@@@@@@@@ apt-source elkcode 139s Get:1 http://ftpmaster.internal/ubuntu questing/universe elkcode 10.4.5-1 (dsc) [2084 B] 139s Get:2 http://ftpmaster.internal/ubuntu questing/universe elkcode 10.4.5-1 (tar) [2913 kB] 139s Get:3 http://ftpmaster.internal/ubuntu questing/universe elkcode 10.4.5-1 (diff) [10.6 kB] 139s gpgv: Signature made Sun Mar 9 23:37:31 2025 UTC 139s gpgv: using RSA key 9CA877749FAB2E4FA96862ECDC686A27B43481B0 139s gpgv: Can't check signature: No public key 139s dpkg-source: warning: cannot verify inline signature for ./elkcode_10.4.5-1.dsc: no acceptable signature found 140s autopkgtest [10:37:43]: testing package elkcode version 10.4.5-1 140s autopkgtest [10:37:43]: build not needed 141s autopkgtest [10:37:44]: test testsuite.sh: preparing testbed 141s Reading package lists... 141s Building dependency tree... 141s Reading state information... 142s Starting pkgProblemResolver with broken count: 0 142s Starting 2 pkgProblemResolver with broken count: 0 142s Done 143s The following NEW packages will be installed: 143s elk-lapw libamd-comgr2 libamdhip64-5 libblas3 libevent-pthreads-2.1-7t64 143s libfabric1 libfftw3-double3 libfftw3-single3 libgfortran5 libgomp1 143s libhsa-runtime64-1 libhsakmt1 libhwloc-plugins libhwloc15 libibmad5 143s libibumad3 liblapack3 libllvm17t64 libmunge2 libopenmpi40 libpciaccess0 143s libpmix2t64 librdmacm1t64 libucx0 libxc9 libxnvctrl0 mpi-default-bin 143s ocl-icd-libopencl1 openmpi-bin openmpi-common 143s 0 upgraded, 30 newly installed, 0 to remove and 0 not upgraded. 143s Need to get 66.7 MB of archives. 143s After this operation, 257 MB of additional disk space will be used. 143s Get:1 http://ftpmaster.internal/ubuntu questing/main arm64 libblas3 arm64 3.12.1-2 [161 kB] 143s Get:2 http://ftpmaster.internal/ubuntu questing/main arm64 libgomp1 arm64 15-20250404-0ubuntu1 [147 kB] 143s Get:3 http://ftpmaster.internal/ubuntu questing/main arm64 libfftw3-double3 arm64 3.3.10-2fakesync1build1 [392 kB] 144s Get:4 http://ftpmaster.internal/ubuntu questing/main arm64 libfftw3-single3 arm64 3.3.10-2fakesync1build1 [604 kB] 144s Get:5 http://ftpmaster.internal/ubuntu questing/main arm64 libgfortran5 arm64 15-20250404-0ubuntu1 [444 kB] 144s Get:6 http://ftpmaster.internal/ubuntu questing/main arm64 liblapack3 arm64 3.12.1-2 [2307 kB] 145s Get:7 http://ftpmaster.internal/ubuntu questing/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.12-stable-10 [7922 B] 145s Get:8 http://ftpmaster.internal/ubuntu questing/main arm64 librdmacm1t64 arm64 56.0-4ubuntu1 [71.4 kB] 145s Get:9 http://ftpmaster.internal/ubuntu questing/universe arm64 libfabric1 arm64 1.17.0-3.1 [542 kB] 145s Get:10 http://ftpmaster.internal/ubuntu questing/universe arm64 libhwloc15 arm64 2.12.0-1 [162 kB] 145s Get:11 http://ftpmaster.internal/ubuntu questing/universe arm64 libmunge2 arm64 0.5.16-1 [15.2 kB] 145s Get:12 http://ftpmaster.internal/ubuntu questing/main arm64 libpciaccess0 arm64 0.17-3build1 [18.9 kB] 145s Get:13 http://ftpmaster.internal/ubuntu questing/main arm64 libxnvctrl0 arm64 510.47.03-0ubuntu4 [12.4 kB] 145s Get:14 http://ftpmaster.internal/ubuntu questing/universe arm64 ocl-icd-libopencl1 arm64 2.3.2-1build1 [37.6 kB] 145s Get:15 http://ftpmaster.internal/ubuntu questing/universe arm64 libhwloc-plugins arm64 2.12.0-1 [15.9 kB] 145s Get:16 http://ftpmaster.internal/ubuntu questing/universe arm64 libpmix2t64 arm64 5.0.6-5 [666 kB] 145s Get:17 http://ftpmaster.internal/ubuntu questing/universe arm64 libllvm17t64 arm64 1:17.0.6-21 [24.9 MB] 148s Get:18 http://ftpmaster.internal/ubuntu questing/universe arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3build2 [14.1 MB] 150s Get:19 http://ftpmaster.internal/ubuntu questing/universe arm64 libhsakmt1 arm64 5.7.0-1build1 [63.6 kB] 150s Get:20 http://ftpmaster.internal/ubuntu questing/universe arm64 libhsa-runtime64-1 arm64 5.7.1-2build1 [286 kB] 150s Get:21 http://ftpmaster.internal/ubuntu questing/universe arm64 libamdhip64-5 arm64 5.7.1-5build1 [9707 kB] 151s Get:22 http://ftpmaster.internal/ubuntu questing/main arm64 libibumad3 arm64 56.0-4ubuntu1 [31.3 kB] 151s Get:23 http://ftpmaster.internal/ubuntu questing/main arm64 libibmad5 arm64 56.0-4ubuntu1 [44.1 kB] 151s Get:24 http://ftpmaster.internal/ubuntu questing/universe arm64 libucx0 arm64 1.18.1+ds-2 [1161 kB] 152s Get:25 http://ftpmaster.internal/ubuntu questing/universe arm64 libopenmpi40 arm64 5.0.7-1 [2419 kB] 152s Get:26 http://ftpmaster.internal/ubuntu questing/universe arm64 libxc9 arm64 5.2.3-1ubuntu1 [4109 kB] 152s Get:27 http://ftpmaster.internal/ubuntu questing/universe arm64 openmpi-common all 5.0.7-1 [97.9 kB] 153s Get:28 http://ftpmaster.internal/ubuntu questing/universe arm64 openmpi-bin arm64 5.0.7-1 [195 kB] 153s Get:29 http://ftpmaster.internal/ubuntu questing/universe arm64 mpi-default-bin arm64 1.18 [2510 B] 153s Get:30 http://ftpmaster.internal/ubuntu questing/universe arm64 elk-lapw arm64 10.4.5-1 [3985 kB] 154s Fetched 66.7 MB in 10s (6503 kB/s) 154s Selecting previously unselected package libblas3:arm64. 154s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 117821 files and directories currently installed.) 154s Preparing to unpack .../00-libblas3_3.12.1-2_arm64.deb ... 154s Unpacking libblas3:arm64 (3.12.1-2) ... 154s Selecting previously unselected package libgomp1:arm64. 154s Preparing to unpack .../01-libgomp1_15-20250404-0ubuntu1_arm64.deb ... 154s Unpacking libgomp1:arm64 (15-20250404-0ubuntu1) ... 154s Selecting previously unselected package libfftw3-double3:arm64. 154s Preparing to unpack .../02-libfftw3-double3_3.3.10-2fakesync1build1_arm64.deb ... 154s Unpacking libfftw3-double3:arm64 (3.3.10-2fakesync1build1) ... 154s Selecting previously unselected package libfftw3-single3:arm64. 154s Preparing to unpack .../03-libfftw3-single3_3.3.10-2fakesync1build1_arm64.deb ... 154s Unpacking libfftw3-single3:arm64 (3.3.10-2fakesync1build1) ... 154s Selecting previously unselected package libgfortran5:arm64. 154s Preparing to unpack .../04-libgfortran5_15-20250404-0ubuntu1_arm64.deb ... 154s Unpacking libgfortran5:arm64 (15-20250404-0ubuntu1) ... 154s Selecting previously unselected package liblapack3:arm64. 154s Preparing to unpack .../05-liblapack3_3.12.1-2_arm64.deb ... 154s Unpacking liblapack3:arm64 (3.12.1-2) ... 154s Selecting previously unselected package libevent-pthreads-2.1-7t64:arm64. 154s Preparing to unpack .../06-libevent-pthreads-2.1-7t64_2.1.12-stable-10_arm64.deb ... 154s Unpacking libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10) ... 154s Selecting previously unselected package librdmacm1t64:arm64. 154s Preparing to unpack .../07-librdmacm1t64_56.0-4ubuntu1_arm64.deb ... 154s Unpacking librdmacm1t64:arm64 (56.0-4ubuntu1) ... 154s Selecting previously unselected package libfabric1:arm64. 154s Preparing to unpack .../08-libfabric1_1.17.0-3.1_arm64.deb ... 154s Unpacking libfabric1:arm64 (1.17.0-3.1) ... 155s Selecting previously unselected package libhwloc15:arm64. 155s Preparing to unpack .../09-libhwloc15_2.12.0-1_arm64.deb ... 155s Unpacking libhwloc15:arm64 (2.12.0-1) ... 155s Selecting previously unselected package libmunge2:arm64. 155s Preparing to unpack .../10-libmunge2_0.5.16-1_arm64.deb ... 155s Unpacking libmunge2:arm64 (0.5.16-1) ... 155s Selecting previously unselected package libpciaccess0:arm64. 155s Preparing to unpack .../11-libpciaccess0_0.17-3build1_arm64.deb ... 155s Unpacking libpciaccess0:arm64 (0.17-3build1) ... 155s Selecting previously unselected package libxnvctrl0:arm64. 155s Preparing to unpack .../12-libxnvctrl0_510.47.03-0ubuntu4_arm64.deb ... 155s Unpacking libxnvctrl0:arm64 (510.47.03-0ubuntu4) ... 155s Selecting previously unselected package ocl-icd-libopencl1:arm64. 155s Preparing to unpack .../13-ocl-icd-libopencl1_2.3.2-1build1_arm64.deb ... 155s Unpacking ocl-icd-libopencl1:arm64 (2.3.2-1build1) ... 155s Selecting previously unselected package libhwloc-plugins:arm64. 155s Preparing to unpack .../14-libhwloc-plugins_2.12.0-1_arm64.deb ... 155s Unpacking libhwloc-plugins:arm64 (2.12.0-1) ... 155s Selecting previously unselected package libpmix2t64:arm64. 155s Preparing to unpack .../15-libpmix2t64_5.0.6-5_arm64.deb ... 155s Unpacking libpmix2t64:arm64 (5.0.6-5) ... 155s Selecting previously unselected package libllvm17t64:arm64. 155s Preparing to unpack .../16-libllvm17t64_1%3a17.0.6-21_arm64.deb ... 155s Unpacking libllvm17t64:arm64 (1:17.0.6-21) ... 156s Selecting previously unselected package libamd-comgr2:arm64. 156s Preparing to unpack .../17-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3build2_arm64.deb ... 156s Unpacking libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3build2) ... 156s Selecting previously unselected package libhsakmt1:arm64. 156s Preparing to unpack .../18-libhsakmt1_5.7.0-1build1_arm64.deb ... 156s Unpacking libhsakmt1:arm64 (5.7.0-1build1) ... 156s Selecting previously unselected package libhsa-runtime64-1. 156s Preparing to unpack .../19-libhsa-runtime64-1_5.7.1-2build1_arm64.deb ... 156s Unpacking libhsa-runtime64-1 (5.7.1-2build1) ... 156s Selecting previously unselected package libamdhip64-5. 156s Preparing to unpack .../20-libamdhip64-5_5.7.1-5build1_arm64.deb ... 156s Unpacking libamdhip64-5 (5.7.1-5build1) ... 156s Selecting previously unselected package libibumad3:arm64. 156s Preparing to unpack .../21-libibumad3_56.0-4ubuntu1_arm64.deb ... 156s Unpacking libibumad3:arm64 (56.0-4ubuntu1) ... 156s Selecting previously unselected package libibmad5:arm64. 156s Preparing to unpack .../22-libibmad5_56.0-4ubuntu1_arm64.deb ... 156s Unpacking libibmad5:arm64 (56.0-4ubuntu1) ... 156s Selecting previously unselected package libucx0:arm64. 157s Preparing to unpack .../23-libucx0_1.18.1+ds-2_arm64.deb ... 157s Unpacking libucx0:arm64 (1.18.1+ds-2) ... 157s Selecting previously unselected package libopenmpi40:arm64. 157s Preparing to unpack .../24-libopenmpi40_5.0.7-1_arm64.deb ... 157s Unpacking libopenmpi40:arm64 (5.0.7-1) ... 157s Selecting previously unselected package libxc9:arm64. 157s Preparing to unpack .../25-libxc9_5.2.3-1ubuntu1_arm64.deb ... 157s Unpacking libxc9:arm64 (5.2.3-1ubuntu1) ... 157s Selecting previously unselected package openmpi-common. 157s Preparing to unpack .../26-openmpi-common_5.0.7-1_all.deb ... 157s Unpacking openmpi-common (5.0.7-1) ... 157s Selecting previously unselected package openmpi-bin. 157s Preparing to unpack .../27-openmpi-bin_5.0.7-1_arm64.deb ... 157s Unpacking openmpi-bin (5.0.7-1) ... 157s Selecting previously unselected package mpi-default-bin. 157s Preparing to unpack .../28-mpi-default-bin_1.18_arm64.deb ... 157s Unpacking mpi-default-bin (1.18) ... 157s Selecting previously unselected package elk-lapw. 157s Preparing to unpack .../29-elk-lapw_10.4.5-1_arm64.deb ... 157s Unpacking elk-lapw (10.4.5-1) ... 157s Setting up libpciaccess0:arm64 (0.17-3build1) ... 157s Setting up libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-10) ... 157s Setting up libibumad3:arm64 (56.0-4ubuntu1) ... 157s Setting up libibmad5:arm64 (56.0-4ubuntu1) ... 157s Setting up libgomp1:arm64 (15-20250404-0ubuntu1) ... 157s Setting up libxnvctrl0:arm64 (510.47.03-0ubuntu4) ... 157s Setting up libblas3:arm64 (3.12.1-2) ... 157s update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode 157s Setting up libmunge2:arm64 (0.5.16-1) ... 157s Setting up libllvm17t64:arm64 (1:17.0.6-21) ... 157s Setting up libhwloc15:arm64 (2.12.0-1) ... 157s Setting up libfftw3-double3:arm64 (3.3.10-2fakesync1build1) ... 157s Setting up libgfortran5:arm64 (15-20250404-0ubuntu1) ... 157s Setting up ocl-icd-libopencl1:arm64 (2.3.2-1build1) ... 157s Setting up openmpi-common (5.0.7-1) ... 157s Setting up librdmacm1t64:arm64 (56.0-4ubuntu1) ... 157s Setting up libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3build2) ... 157s Setting up libhsakmt1:arm64 (5.7.0-1build1) ... 157s Setting up libxc9:arm64 (5.2.3-1ubuntu1) ... 157s Setting up libfabric1:arm64 (1.17.0-3.1) ... 157s Setting up liblapack3:arm64 (3.12.1-2) ... 157s update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode 157s Setting up libfftw3-single3:arm64 (3.3.10-2fakesync1build1) ... 157s Setting up libhwloc-plugins:arm64 (2.12.0-1) ... 157s Setting up libpmix2t64:arm64 (5.0.6-5) ... 157s Setting up libhsa-runtime64-1 (5.7.1-2build1) ... 157s Setting up libamdhip64-5 (5.7.1-5build1) ... 157s Setting up libucx0:arm64 (1.18.1+ds-2) ... 157s Setting up libopenmpi40:arm64 (5.0.7-1) ... 157s Setting up openmpi-bin (5.0.7-1) ... 157s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 157s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 157s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 157s Setting up mpi-default-bin (1.18) ... 157s Setting up elk-lapw (10.4.5-1) ... 157s Processing triggers for man-db (2.13.0-1) ... 158s Processing triggers for libc-bin (2.41-6ubuntu1) ... 159s autopkgtest [10:38:02]: test testsuite.sh: [----------------------- 159s 159s Running test in directory test_001... 159s 159s ┌─────────────────────────────────┐ 159s │ Elk code version 10.4.5 started │ 159s └─────────────────────────────────┘ 159s 159s Number of MPI processes : 1 159s Number of OpenMP threads per MPI process : 2 159s Total number of threads (MPI x OpenMP) : 2 159s Maximum OpenMP nesting level : 4 159s Number of OpenMP threads at first nesting level : 2 159s Number of MKL threads : 2 159s 159s RAM disk enabled 159s 159s ┌──────────────────┐ 159s │ Current task : 0 │ 159s └──────────────────┘ 159s Info(checkmt): changed muffin-tin radius of species 3 (Cu) from 2.4000 to 1.9694 159s Info(checkmt): changed muffin-tin radius of species 4 (O) from 1.8000 to 1.4770 159s 159s Info(findsymcrys): atomic basis shift (lattice) : 159s 0.5000000000 0.5000000000 0.5000000000 159s See GEOMETRY.OUT for new atomic positions 202s 202s ┌──────────────────┐ 202s │ Current task : 1 │ 202s └──────────────────┘ 209s 209s ┌────────────────────┐ 209s │ Current task : 115 │ 209s └────────────────────┘ 210s 210s Info(writeefg): electric field gradient written to EFG.OUT 210s 210s ┌────────────────────┐ 210s │ Current task : 500 │ 210s └────────────────────┘ 210s 210s Info(testcheck): passed all tests 210s 210s ┌──────────────────┐ 210s │ Elk code stopped │ 210s └──────────────────┘ 210s Passed 210s 210s Running test in directory test_002... 210s 210s ┌─────────────────────────────────┐ 210s │ Elk code version 10.4.5 started │ 210s └─────────────────────────────────┘ 210s 210s Number of MPI processes : 1 210s Number of OpenMP threads per MPI process : 2 210s Total number of threads (MPI x OpenMP) : 2 210s Maximum OpenMP nesting level : 4 210s Number of OpenMP threads at first nesting level : 2 210s Number of MKL threads : 2 210s 210s RAM disk enabled 210s 210s ┌──────────────────┐ 210s │ Current task : 0 │ 210s └──────────────────┘ 210s Info(checkmt): changed muffin-tin radius of species 1 (Fe) from 2.4000 to 2.3202 211s 211s Warning(gndstate): failed to reach self-consistency after 5 loops 211s 211s ┌────────────────────┐ 211s │ Current task : 500 │ 211s └────────────────────┘ 211s 211s Info(testcheck): passed all tests 211s 211s ┌──────────────────┐ 211s │ Elk code stopped │ 211s └──────────────────┘ 211s Passed 211s 211s Running test in directory test_003... 211s 211s ┌─────────────────────────────────┐ 211s │ Elk code version 10.4.5 started │ 211s └─────────────────────────────────┘ 211s 211s Number of MPI processes : 1 211s Number of OpenMP threads per MPI process : 2 211s Total number of threads (MPI x OpenMP) : 2 211s Maximum OpenMP nesting level : 4 211s Number of OpenMP threads at first nesting level : 2 211s Number of MKL threads : 2 211s 211s RAM disk enabled 211s 211s ┌──────────────────┐ 211s │ Current task : 0 │ 211s └──────────────────┘ 211s Info(checkmt): changed muffin-tin radius of species 1 (Si) from 2.2000 to 2.1436 211s 211s Info(findsymcrys): atomic basis shift (lattice) : 211s 0.3650000000 0.3650000000 0.3650000000 211s See GEOMETRY.OUT for new atomic positions 212s 212s Warning(gndstate): failed to reach self-consistency after 10 loops 212s 212s ┌────────────────────┐ 212s │ Current task : 500 │ 212s └────────────────────┘ 212s 212s Info(testcheck): passed all tests 212s 212s ┌──────────────────┐ 212s │ Elk code stopped │ 212s └──────────────────┘ 212s Passed 212s 212s Running test in directory test_005... 212s 212s ┌─────────────────────────────────┐ 212s │ Elk code version 10.4.5 started │ 212s └─────────────────────────────────┘ 212s 212s Number of MPI processes : 1 212s Number of OpenMP threads per MPI process : 2 212s Total number of threads (MPI x OpenMP) : 2 212s Maximum OpenMP nesting level : 4 212s Number of OpenMP threads at first nesting level : 2 212s Number of MKL threads : 2 212s 212s RAM disk enabled 212s 212s ┌──────────────────┐ 212s │ Current task : 0 │ 212s └──────────────────┘ 212s Info(checkmt): changed muffin-tin radius of species 1 (Fe) from 2.4000 to 2.3615 213s 213s Warning(gndstate): failed to reach self-consistency after 5 loops 213s 213s ┌────────────────────┐ 213s │ Current task : 500 │ 213s └────────────────────┘ 213s 213s Info(testcheck): passed all tests 213s 213s ┌──────────────────┐ 213s │ Elk code stopped │ 213s └──────────────────┘ 213s Passed 213s 213s Running test in directory test_007... 213s 213s ┌─────────────────────────────────┐ 213s │ Elk code version 10.4.5 started │ 213s └─────────────────────────────────┘ 213s 213s Number of MPI processes : 1 213s Number of OpenMP threads per MPI process : 2 213s Total number of threads (MPI x OpenMP) : 2 213s Maximum OpenMP nesting level : 4 213s Number of OpenMP threads at first nesting level : 2 213s Number of MKL threads : 2 213s 213s RAM disk enabled 213s 213s ┌──────────────────┐ 213s │ Current task : 0 │ 213s └──────────────────┘ 225s 225s ┌───────────────────┐ 225s │ Current task : 15 │ 225s └───────────────────┘ 225s 225s Info(writelsj): 225s muffin-tin L, S and J expectation values written to LSJ.OUT 225s 225s ┌───────────────────┐ 225s │ Current task : 16 │ 225s └───────────────────┘ 226s 226s Info(writelsj): 226s muffin-tin L, S and J expectation values for each k-point and state 226s in kstlist written to LSJ_KST.OUT 226s 226s ┌────────────────────┐ 226s │ Current task : 500 │ 226s └────────────────────┘ 226s 226s Info(testcheck): passed all tests 226s 226s ┌──────────────────┐ 226s │ Elk code stopped │ 226s └──────────────────┘ 226s Passed 226s 226s Running test in directory test_009... 226s 226s ┌─────────────────────────────────┐ 226s │ Elk code version 10.4.5 started │ 226s └─────────────────────────────────┘ 226s 226s Number of MPI processes : 1 226s Number of OpenMP threads per MPI process : 2 226s Total number of threads (MPI x OpenMP) : 2 226s Maximum OpenMP nesting level : 4 226s Number of OpenMP threads at first nesting level : 2 226s Number of MKL threads : 2 226s 226s RAM disk enabled 226s 226s ┌──────────────────┐ 226s │ Current task : 0 │ 226s └──────────────────┘ 226s Info(checkmt): changed muffin-tin radius of species 1 (B) from 1.8000 to 1.6129 226s Info(checkmt): changed muffin-tin radius of species 2 (N+) from 1.4500 to 1.2993 227s 227s Warning(gndstate): failed to reach self-consistency after 6 loops 227s 227s ┌────────────────────┐ 227s │ Current task : 140 │ 227s └────────────────────┘ 227s Info(elnes): 1 of 8 k-points 227s Info(elnes): 2 of 8 k-points 227s Info(elnes): 3 of 8 k-points 227s Info(elnes): 4 of 8 k-points 227s Info(elnes): 5 of 8 k-points 227s Info(elnes): 6 of 8 k-points 227s Info(elnes): 7 of 8 k-points 227s Info(elnes): 8 of 8 k-points 227s 227s Info(elnes): 227s ELNES double differential cross-section written to ELNES.OUT 227s 227s ┌────────────────────┐ 227s │ Current task : 500 │ 227s └────────────────────┘ 227s 227s Info(testcheck): passed all tests 227s 227s ┌──────────────────┐ 227s │ Elk code stopped │ 227s └──────────────────┘ 227s Passed 227s 227s Running test in directory test_010... 227s 227s ┌─────────────────────────────────┐ 227s │ Elk code version 10.4.5 started │ 227s └─────────────────────────────────┘ 227s 227s Number of MPI processes : 1 227s Number of OpenMP threads per MPI process : 2 227s Total number of threads (MPI x OpenMP) : 2 227s Maximum OpenMP nesting level : 4 227s Number of OpenMP threads at first nesting level : 2 227s Number of MKL threads : 2 227s 227s RAM disk enabled 227s 227s ┌──────────────────┐ 227s │ Current task : 0 │ 227s └──────────────────┘ 227s Info(checkmt): changed muffin-tin radius of species 1 (O) from 1.8000 to 0.9906 227s Info(checkmt): changed muffin-tin radius of species 2 (H) from 1.4000 to 0.7704 228s 228s Warning(linengy): could not find 1 linearisation energies in s.c. loop 1 229s 229s Warning(gndstate): failed to reach self-consistency after 2 loops 229s 229s Warning(linengy): could not find 1 linearisation energies in s.c. loop 2 230s 230s ┌────────────────────┐ 230s │ Current task : 500 │ 230s └────────────────────┘ 230s 230s Info(testcheck): passed all tests 230s 230s ┌──────────────────┐ 230s │ Elk code stopped │ 230s └──────────────────┘ 230s Passed 230s 230s Running test in directory test_011... 230s 230s ┌─────────────────────────────────┐ 230s │ Elk code version 10.4.5 started │ 230s └─────────────────────────────────┘ 230s 230s Number of MPI processes : 1 230s Number of OpenMP threads per MPI process : 2 230s Total number of threads (MPI x OpenMP) : 2 230s Maximum OpenMP nesting level : 4 230s Number of OpenMP threads at first nesting level : 2 230s Number of MKL threads : 2 230s 230s RAM disk enabled 230s 230s ┌──────────────────┐ 230s │ Current task : 0 │ 230s └──────────────────┘ 230s Info(checkmt): changed muffin-tin radius of species 1 (Si) from 2.2000 to 2.1964 230s 230s Info(findsymcrys): atomic basis shift (lattice) : 230s 0.3750000000 0.3750000000 0.3750000000 230s See GEOMETRY.OUT for new atomic positions 230s 230s Warning(gndstate): failed to reach self-consistency after 2 loops 230s 230s ┌──────────────────┐ 230s │ Current task : 5 │ 230s └──────────────────┘ 230s 230s Info(genkmat): 1 of 2 k-points 230s Info(genkmat): 2 of 2 k-points 230s Info(hartfock): self-consistent loop number : 1 230s Info(eveqnhf): 1 of 2 k-points 230s Info(eveqnhf): 2 of 2 k-points 231s Info(hartfock): self-consistent loop number : 2 231s Info(eveqnhf): 1 of 2 k-points 231s Info(eveqnhf): 2 of 2 k-points 231s Info(exxengy): 1 of 2 k-points 231s Info(exxengy): 2 of 2 k-points 231s 231s ┌────────────────────┐ 231s │ Current task : 500 │ 231s └────────────────────┘ 231s 231s Info(testcheck): passed all tests 231s 231s ┌──────────────────┐ 231s │ Elk code stopped │ 231s └──────────────────┘ 231s Passed 231s 231s Running test in directory test_013... 232s 232s ┌─────────────────────────────────┐ 232s │ Elk code version 10.4.5 started │ 232s └─────────────────────────────────┘ 232s 232s Number of MPI processes : 1 232s Number of OpenMP threads per MPI process : 2 232s Total number of threads (MPI x OpenMP) : 2 232s Maximum OpenMP nesting level : 4 232s Number of OpenMP threads at first nesting level : 2 232s Number of MKL threads : 2 232s 232s RAM disk enabled 232s 232s ┌──────────────────┐ 232s │ Current task : 0 │ 232s └──────────────────┘ 232s Info(checkmt): changed muffin-tin radius of species 1 (Fe) from 2.4000 to 2.3828 232s Info(checkmt): changed muffin-tin radius of species 2 (Al) from 2.2000 to 2.1842 238s 238s Warning(gndstate): failed to reach self-consistency after 4 loops 243s 243s ┌────────────────────┐ 243s │ Current task : 500 │ 243s └────────────────────┘ 243s 243s Info(testcheck): passed all tests 243s 243s ┌──────────────────┐ 243s │ Elk code stopped │ 243s └──────────────────┘ 243s Passed 243s 243s Running test in directory test_014... 243s 243s ┌─────────────────────────────────┐ 243s │ Elk code version 10.4.5 started │ 243s └─────────────────────────────────┘ 243s 243s Number of MPI processes : 1 243s Number of OpenMP threads per MPI process : 2 243s Total number of threads (MPI x OpenMP) : 2 243s Maximum OpenMP nesting level : 4 243s Number of OpenMP threads at first nesting level : 2 243s Number of MKL threads : 2 243s 243s RAM disk enabled 243s 243s ┌──────────────────┐ 243s │ Current task : 0 │ 243s └──────────────────┘ 243s Info(checkmt): changed muffin-tin radius of species 1 (Si) from 2.2000 to 2.1964 243s 243s Info(findsymcrys): atomic basis shift (lattice) : 243s 0.3750000000 0.3750000000 0.3750000000 243s See GEOMETRY.OUT for new atomic positions 244s Info(oepvcl): 1 of 8 k-points 244s Info(oepvcl): 2 of 8 k-points 245s Info(oepvcl): 3 of 8 k-points 245s Info(oepvcl): 4 of 8 k-points 245s Info(oepvcl): 5 of 8 k-points 245s Info(oepvcl): 6 of 8 k-points 246s Info(oepvcl): 7 of 8 k-points 246s Info(oepvcl): 8 of 8 k-points 248s Info(oepmain): done 10 iterations of 20 249s Info(oepmain): done 20 iterations of 20 249s 249s Warning(gndstate): failed to reach self-consistency after 2 loops 250s Info(oepvcl): 1 of 8 k-points 250s Info(oepvcl): 2 of 8 k-points 250s Info(oepvcl): 3 of 8 k-points 251s Info(oepvcl): 4 of 8 k-points 251s Info(oepvcl): 5 of 8 k-points 251s Info(oepvcl): 6 of 8 k-points 252s Info(oepvcl): 7 of 8 k-points 252s Info(oepvcl): 8 of 8 k-points 254s Info(oepmain): done 10 iterations of 20 255s Info(oepmain): done 20 iterations of 20 256s Info(exxengy): 1 of 8 k-points 256s Info(exxengy): 2 of 8 k-points 256s Info(exxengy): 3 of 8 k-points 256s Info(exxengy): 4 of 8 k-points 256s Info(exxengy): 5 of 8 k-points 256s Info(exxengy): 6 of 8 k-points 256s Info(exxengy): 7 of 8 k-points 256s Info(exxengy): 8 of 8 k-points 256s 256s ┌────────────────────┐ 256s │ Current task : 500 │ 256s └────────────────────┘ 256s 256s Info(testcheck): passed all tests 256s 256s ┌──────────────────┐ 256s │ Elk code stopped │ 256s └──────────────────┘ 256s Passed 256s 256s Running test in directory test_018... 256s 256s ┌─────────────────────────────────┐ 256s │ Elk code version 10.4.5 started │ 256s └─────────────────────────────────┘ 256s 256s Number of MPI processes : 1 256s Number of OpenMP threads per MPI process : 2 256s Total number of threads (MPI x OpenMP) : 2 256s Maximum OpenMP nesting level : 4 256s Number of OpenMP threads at first nesting level : 2 256s Number of MKL threads : 2 256s 256s RAM disk enabled 256s 256s ┌──────────────────┐ 256s │ Current task : 0 │ 256s └──────────────────┘ 258s 258s ┌────────────────────┐ 258s │ Current task : 205 │ 258s └────────────────────┘ 259s Info(phonon): working on DYN_Q0000_0000_0000_S01_A001_P1.OUT 266s Info(phonon): working on DYN_Q0102_0000_0000_S01_A001_P1.OUT 276s Info(phonon): working on DYN_Q0102_0102_0102_S01_A001_P1.OUT 284s Info(phonon): working on DYN_Q0000_0000_0000_S01_A001_P2.OUT 291s Info(phonon): working on DYN_Q0102_0000_0000_S01_A001_P2.OUT 302s Info(phonon): working on DYN_Q0102_0102_0102_S01_A001_P2.OUT 310s Info(phonon): working on DYN_Q0000_0000_0000_S01_A001_P3.OUT 317s Info(phonon): working on DYN_Q0102_0000_0000_S01_A001_P3.OUT 326s Info(phonon): working on DYN_Q0102_0102_0102_S01_A001_P3.OUT 334s Info(dyntask): nothing more to do 334s 334s ┌────────────────────┐ 334s │ Current task : 210 │ 334s └────────────────────┘ 362s 362s Info(phdos): 362s phonon density of states written to PHDOS.OUT 362s thermodynamic properties written to THERMO.OUT 362s 362s ┌────────────────────┐ 362s │ Current task : 500 │ 362s └────────────────────┘ 362s 362s Info(testcheck): passed all tests 362s 362s ┌──────────────────┐ 362s │ Elk code stopped │ 362s └──────────────────┘ 362s Passed 363s autopkgtest [10:41:26]: test testsuite.sh: -----------------------] 363s autopkgtest [10:41:26]: test testsuite.sh: - - - - - - - - - - results - - - - - - - - - - 363s testsuite.sh PASS 364s autopkgtest [10:41:27]: @@@@@@@@@@@@@@@@@@@@ summary 364s testsuite.sh PASS 382s nova [W] Using flock in prodstack6-arm64 382s Creating nova instance adt-questing-arm64-elkcode-20250502-103523-juju-7f2275-prod-proposed-migration-environment-20-4faf224a-71f6-47c1-b522-fe3109aa348b from image adt/ubuntu-questing-arm64-server-20250502.img (UUID a0b7b7fd-ad05-4ea9-97eb-0f52dbbe98e1)... 382s nova [W] Timed out waiting for 00352615-4044-4823-8ea7-b063c05fb380 to get deleted.