0s autopkgtest [18:52:00]: starting date and time: 2025-05-03 18:52:00+0000
  0s autopkgtest [18:52:00]: git checkout: 9986aa8c Merge branch 'skia/fix_network_interface' into 'ubuntu/production'
  0s autopkgtest [18:52:00]: host juju-7f2275-prod-proposed-migration-environment-23; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work._ewm4duk/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:nlme --apt-upgrade r-cran-glmmtmb --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=nlme/3.1.168-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-23@bos03-18.secgroup --name adt-questing-amd64-r-cran-glmmtmb-20250503-185159-juju-7f2275-prod-proposed-migration-environment-23-600a1063-38f3-4fb0-995a-ffd2eac822f1 --image adt/ubuntu-questing-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-23 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/
 44s autopkgtest [18:52:44]: testbed dpkg architecture: amd64
 44s autopkgtest [18:52:44]: testbed apt version: 3.0.0
 44s autopkgtest [18:52:44]: @@@@@@@@@@@@@@@@@@@@ test bed setup
 44s autopkgtest [18:52:44]: testbed release detected to be: None
 45s autopkgtest [18:52:45]: updating testbed package index (apt update)
 45s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB]
 46s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease
 46s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease
 46s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease
 46s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [33.7 kB]
 46s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [149 kB]
 46s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [1442 kB]
 46s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 Packages [203 kB]
 46s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/main i386 Packages [146 kB]
 46s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/universe amd64 Packages [1424 kB]
 46s Get:11 http://ftpmaster.internal/ubuntu questing-proposed/universe i386 Packages [576 kB]
 46s Get:12 http://ftpmaster.internal/ubuntu questing-proposed/multiverse i386 Packages [23.1 kB]
 46s Get:13 http://ftpmaster.internal/ubuntu questing-proposed/multiverse amd64 Packages [48.6 kB]
 46s Fetched 4155 kB in 1s (3956 kB/s)
 47s Reading package lists...
 48s autopkgtest [18:52:48]: upgrading testbed (apt dist-upgrade and autopurge)
 48s Reading package lists...
 48s Building dependency tree...
 48s Reading state information...
 49s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
 49s Starting 2 pkgProblemResolver with broken count: 0
 49s Done
 49s Entering ResolveByKeep
 49s 
 49s Calculating upgrade...
 50s The following packages will be upgraded:
 50s   cloud-init cloud-init-base debianutils libmbim-glib4 libmbim-proxy
 50s   libnftnl11 libqmi-glib5 libqmi-proxy libsepol2 python3-lazr.restfulclient
 50s   sos
 50s 11 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 50s Need to get 2693 kB of archives.
 50s After this operation, 104 kB disk space will be freed.
 50s Get:1 http://ftpmaster.internal/ubuntu questing/main amd64 debianutils amd64 5.22 [93.0 kB]
 50s Get:2 http://ftpmaster.internal/ubuntu questing/main amd64 libsepol2 amd64 3.8.1-1 [327 kB]
 50s Get:3 http://ftpmaster.internal/ubuntu questing/main amd64 libnftnl11 amd64 1.2.9-1 [69.1 kB]
 50s Get:4 http://ftpmaster.internal/ubuntu questing/main amd64 cloud-init-base all 25.2~1g7a0265d3-0ubuntu1 [619 kB]
 50s Get:5 http://ftpmaster.internal/ubuntu questing/main amd64 libmbim-proxy amd64 1.32.0-1 [6276 B]
 50s Get:6 http://ftpmaster.internal/ubuntu questing/main amd64 libmbim-glib4 amd64 1.32.0-1 [233 kB]
 50s Get:7 http://ftpmaster.internal/ubuntu questing/main amd64 libqmi-proxy amd64 1.36.0-1 [6220 B]
 50s Get:8 http://ftpmaster.internal/ubuntu questing/main amd64 libqmi-glib5 amd64 1.36.0-1 [920 kB]
 50s Get:9 http://ftpmaster.internal/ubuntu questing/main amd64 python3-lazr.restfulclient all 0.14.6-3 [51.0 kB]
 50s Get:10 http://ftpmaster.internal/ubuntu questing/main amd64 sos all 4.9.1-1 [367 kB]
 50s Get:11 http://ftpmaster.internal/ubuntu questing/main amd64 cloud-init all 25.2~1g7a0265d3-0ubuntu1 [2106 B]
 51s Preconfiguring packages ...
 51s Fetched 2693 kB in 1s (4356 kB/s)
 51s (Reading database ... 
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 80514 files and directories currently installed.)
 51s Preparing to unpack .../debianutils_5.22_amd64.deb ...
 51s Unpacking debianutils (5.22) over (5.21) ...
 51s Setting up debianutils (5.22) ...
 51s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 80514 files and directories currently installed.)
 51s Preparing to unpack .../libsepol2_3.8.1-1_amd64.deb ...
 51s Unpacking libsepol2:amd64 (3.8.1-1) over (3.7-1) ...
 51s Setting up libsepol2:amd64 (3.8.1-1) ...
 51s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 80514 files and directories currently installed.)
 51s Preparing to unpack .../0-libnftnl11_1.2.9-1_amd64.deb ...
 51s Unpacking libnftnl11:amd64 (1.2.9-1) over (1.2.8-1) ...
 51s Preparing to unpack .../1-cloud-init-base_25.2~1g7a0265d3-0ubuntu1_all.deb ...
 51s Unpacking cloud-init-base (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ...
 51s Preparing to unpack .../2-libmbim-proxy_1.32.0-1_amd64.deb ...
 51s Unpacking libmbim-proxy (1.32.0-1) over (1.31.2-0ubuntu4) ...
 51s Preparing to unpack .../3-libmbim-glib4_1.32.0-1_amd64.deb ...
 51s Unpacking libmbim-glib4:amd64 (1.32.0-1) over (1.31.2-0ubuntu4) ...
 52s Preparing to unpack .../4-libqmi-proxy_1.36.0-1_amd64.deb ...
 52s Unpacking libqmi-proxy (1.36.0-1) over (1.35.6-1) ...
 52s Preparing to unpack .../5-libqmi-glib5_1.36.0-1_amd64.deb ...
 52s Unpacking libqmi-glib5:amd64 (1.36.0-1) over (1.35.6-1) ...
 52s Preparing to unpack .../6-python3-lazr.restfulclient_0.14.6-3_all.deb ...
 52s Unpacking python3-lazr.restfulclient (0.14.6-3) over (0.14.6-2) ...
 52s Preparing to unpack .../7-sos_4.9.1-1_all.deb ...
 52s Unpacking sos (4.9.1-1) over (4.9.0-6) ...
 52s Preparing to unpack .../8-cloud-init_25.2~1g7a0265d3-0ubuntu1_all.deb ...
 52s Unpacking cloud-init (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ...
 52s Setting up sos (4.9.1-1) ...
 53s Setting up libnftnl11:amd64 (1.2.9-1) ...
 53s Setting up cloud-init-base (25.2~1g7a0265d3-0ubuntu1) ...
 54s Setting up python3-lazr.restfulclient (0.14.6-3) ...
 54s Setting up libmbim-glib4:amd64 (1.32.0-1) ...
 54s Setting up cloud-init (25.2~1g7a0265d3-0ubuntu1) ...
 54s Setting up libmbim-proxy (1.32.0-1) ...
 54s Setting up libqmi-glib5:amd64 (1.36.0-1) ...
 54s Setting up libqmi-proxy (1.36.0-1) ...
 54s Processing triggers for libc-bin (2.41-6ubuntu1) ...
 54s Processing triggers for rsyslog (8.2412.0-2ubuntu2) ...
 54s Processing triggers for man-db (2.13.0-1) ...
 56s Reading package lists...
 56s Building dependency tree...
 56s Reading state information...
 57s Starting pkgProblemResolver with broken count: 0
 57s Starting 2 pkgProblemResolver with broken count: 0
 57s Done
 57s Solving dependencies...
 58s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 58s autopkgtest [18:52:58]: rebooting testbed after setup commands that affected boot
 81s autopkgtest [18:53:21]: testbed running kernel: Linux 6.14.0-15-generic #15-Ubuntu SMP PREEMPT_DYNAMIC Sun Apr  6 15:05:05 UTC 2025
 83s autopkgtest [18:53:23]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-glmmtmb
 86s Get:1 http://ftpmaster.internal/ubuntu questing/universe r-cran-glmmtmb 1.1.10+dfsg-1build2 (dsc) [2724 B]
 86s Get:2 http://ftpmaster.internal/ubuntu questing/universe r-cran-glmmtmb 1.1.10+dfsg-1build2 (tar) [4589 kB]
 86s Get:3 http://ftpmaster.internal/ubuntu questing/universe r-cran-glmmtmb 1.1.10+dfsg-1build2 (diff) [15.2 kB]
 86s gpgv: Signature made Sat Mar 22 18:05:17 2025 UTC
 86s gpgv:                using RSA key 5C7ABEA20F8630459CC8C8B5E27F2CF8458C2FA4
 86s gpgv: Can't check signature: No public key
 86s dpkg-source: warning: cannot verify inline signature for ./r-cran-glmmtmb_1.1.10+dfsg-1build2.dsc: no acceptable signature found
 86s autopkgtest [18:53:26]: testing package r-cran-glmmtmb version 1.1.10+dfsg-1build2
 86s autopkgtest [18:53:26]: build not needed
 87s autopkgtest [18:53:27]: test run-unit-test: preparing testbed
 87s Reading package lists...
 88s Building dependency tree...
 88s Reading state information...
 88s Starting pkgProblemResolver with broken count: 0
 88s Starting 2 pkgProblemResolver with broken count: 0
 88s Done
 89s The following NEW packages will be installed:
 89s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
 89s   fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax
 89s   javascript-common libblas3 libcairo2 libdatrie1 libdeflate0 libfontconfig1
 89s   libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libice6 libjbig0
 89s   libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-bootstrap4 libjs-d3
 89s   libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables
 89s   libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-mathjax
 89s   libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify
 89s   libjs-sifter.js libjs-twitter-bootstrap-datepicker liblapack3 liblerc4
 89s   liblua5.4-0 libnlopt0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
 89s   libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6
 89s   libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0
 89s   libxft2 libxrender1 libxss1 libxt6t64 littler node-bootstrap-sass
 89s   node-html5shiv node-normalize.css pandoc pandoc-data r-base-core
 89s   r-cran-abind r-cran-backports r-cran-base64enc r-cran-bbmle r-cran-bdsmatrix
 89s   r-cran-bit r-cran-bit64 r-cran-blme r-cran-boot r-cran-brio r-cran-broom
 89s   r-cran-broom.mixed r-cran-bslib r-cran-cachem r-cran-callr r-cran-car
 89s   r-cran-cardata r-cran-caret r-cran-cellranger r-cran-class r-cran-cli
 89s   r-cran-clipr r-cran-clock r-cran-coda r-cran-codetools r-cran-colorspace
 89s   r-cran-commonmark r-cran-conquer r-cran-cowplot r-cran-cpp11 r-cran-crayon
 89s   r-cran-curl r-cran-data.table r-cran-dbi r-cran-deriv r-cran-desc
 89s   r-cran-diagram r-cran-diffobj r-cran-digest r-cran-doby r-cran-dplyr
 89s   r-cran-e1071 r-cran-effects r-cran-ellipsis r-cran-emmeans
 89s   r-cran-estimability r-cran-evaluate r-cran-fansi r-cran-farver
 89s   r-cran-fastmap r-cran-fontawesome r-cran-forcats r-cran-foreach
 89s   r-cran-foreign r-cran-formula r-cran-fs r-cran-furrr r-cran-future
 89s   r-cran-future.apply r-cran-generics r-cran-ggplot2 r-cran-glmmtmb
 89s   r-cran-globals r-cran-glue r-cran-gower r-cran-gtable r-cran-hardhat
 89s   r-cran-haven r-cran-highr r-cran-hms r-cran-htmltools r-cran-httpuv
 89s   r-cran-insight r-cran-ipred r-cran-isoband r-cran-iterators r-cran-jquerylib
 89s   r-cran-jsonlite r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-later
 89s   r-cran-lattice r-cran-lava r-cran-lifecycle r-cran-listenv r-cran-littler
 89s   r-cran-lme4 r-cran-lubridate r-cran-magrittr r-cran-mass r-cran-matrix
 89s   r-cran-matrixmodels r-cran-matrixstats r-cran-memoise r-cran-mgcv
 89s   r-cran-microbenchmark r-cran-mime r-cran-minqa r-cran-mitools r-cran-mlmrev
 89s   r-cran-modelmetrics r-cran-modelr r-cran-multcomp r-cran-munsell
 89s   r-cran-mvtnorm r-cran-nlme r-cran-nloptr r-cran-nnet r-cran-numderiv
 89s   r-cran-openxlsx r-cran-parallelly r-cran-pbkrtest r-cran-pillar
 89s   r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plyr
 89s   r-cran-png r-cran-praise r-cran-prettyunits r-cran-proc r-cran-processx
 89s   r-cran-prodlim r-cran-progress r-cran-progressr r-cran-promises r-cran-proxy
 89s   r-cran-ps r-cran-pscl r-cran-purrr r-cran-quantreg r-cran-r.methodss3
 89s   r-cran-r.oo r-cran-r.utils r-cran-r6 r-cran-rappdirs r-cran-rbibutils
 89s   r-cran-rcolorbrewer r-cran-rcpp r-cran-rcpparmadillo r-cran-rcppeigen
 89s   r-cran-rdpack r-cran-readr r-cran-readxl r-cran-recipes r-cran-reformulas
 89s   r-cran-rematch r-cran-reshape2 r-cran-rio r-cran-rlang r-cran-rmarkdown
 89s   r-cran-rpart r-cran-rprojroot r-cran-sandwich r-cran-sass r-cran-scales
 89s   r-cran-shape r-cran-shiny r-cran-sourcetools r-cran-sparsem
 89s   r-cran-sparsevctrs r-cran-squarem r-cran-statmod r-cran-stringi
 89s   r-cran-stringr r-cran-survey r-cran-survival r-cran-testthat r-cran-th.data
 89s   r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-timechange
 89s   r-cran-timedate r-cran-tinytex r-cran-tmb r-cran-tzdb r-cran-utf8
 89s   r-cran-vctrs r-cran-viridislite r-cran-vroom r-cran-waldo r-cran-withr
 89s   r-cran-writexl r-cran-xfun r-cran-xtable r-cran-yaml r-cran-zip r-cran-zoo
 89s   unzip x11-common xdg-utils zip
 89s 0 upgraded, 264 newly installed, 0 to remove and 0 not upgraded.
 89s Need to get 250 MB of archives.
 89s After this operation, 643 MB of additional disk space will be used.
 89s Get:1 http://ftpmaster.internal/ubuntu questing/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB]
 89s Get:2 http://ftpmaster.internal/ubuntu questing/main amd64 fonts-dejavu-core all 2.37-8 [835 kB]
 89s Get:3 http://ftpmaster.internal/ubuntu questing/main amd64 fontconfig-config amd64 2.15.0-2.2ubuntu1 [37.8 kB]
 89s Get:4 http://ftpmaster.internal/ubuntu questing/main amd64 libfontconfig1 amd64 2.15.0-2.2ubuntu1 [164 kB]
 89s Get:5 http://ftpmaster.internal/ubuntu questing/main amd64 fontconfig amd64 2.15.0-2.2ubuntu1 [180 kB]
 89s Get:6 http://ftpmaster.internal/ubuntu questing/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB]
 89s Get:7 http://ftpmaster.internal/ubuntu questing/universe amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
 89s Get:8 http://ftpmaster.internal/ubuntu questing/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2208 kB]
 89s Get:9 http://ftpmaster.internal/ubuntu questing/main amd64 javascript-common all 12 [5216 B]
 89s Get:10 http://ftpmaster.internal/ubuntu questing/main amd64 libblas3 amd64 3.12.1-2 [359 kB]
 89s Get:11 http://ftpmaster.internal/ubuntu questing/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB]
 89s Get:12 http://ftpmaster.internal/ubuntu questing/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB]
 89s Get:13 http://ftpmaster.internal/ubuntu questing/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B]
 89s Get:14 http://ftpmaster.internal/ubuntu questing/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB]
 89s Get:15 http://ftpmaster.internal/ubuntu questing/main amd64 libcairo2 amd64 1.18.4-1 [662 kB]
 89s Get:16 http://ftpmaster.internal/ubuntu questing/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB]
 89s Get:17 http://ftpmaster.internal/ubuntu questing/main amd64 libdeflate0 amd64 1.23-2 [49.9 kB]
 90s Get:18 http://ftpmaster.internal/ubuntu questing/main amd64 libgfortran5 amd64 15-20250404-0ubuntu1 [926 kB]
 90s Get:19 http://ftpmaster.internal/ubuntu questing/main amd64 libgomp1 amd64 15-20250404-0ubuntu1 [151 kB]
 90s Get:20 http://ftpmaster.internal/ubuntu questing/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB]
 90s Get:21 http://ftpmaster.internal/ubuntu questing/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB]
 90s Get:22 http://ftpmaster.internal/ubuntu questing/main amd64 x11-common all 1:7.7+23ubuntu4 [21.8 kB]
 90s Get:23 http://ftpmaster.internal/ubuntu questing/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB]
 90s Get:24 http://ftpmaster.internal/ubuntu questing/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB]
 90s Get:25 http://ftpmaster.internal/ubuntu questing/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B]
 90s Get:26 http://ftpmaster.internal/ubuntu questing/universe amd64 libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
 90s Get:27 http://ftpmaster.internal/ubuntu questing/universe amd64 libjs-popper.js all 1.16.1+ds-6 [54.1 kB]
 90s Get:28 http://ftpmaster.internal/ubuntu questing/universe amd64 libjs-bootstrap4 all 4.6.1+dfsg1-5 [531 kB]
 90s Get:29 http://ftpmaster.internal/ubuntu questing/universe amd64 libjs-d3 all 3.5.17-4 [132 kB]
 90s Get:30 http://ftpmaster.internal/ubuntu questing/universe amd64 libjs-es5-shim all 4.6.7-2 [39.8 kB]
 90s Get:31 http://ftpmaster.internal/ubuntu questing/universe amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB]
 90s Get:32 http://ftpmaster.internal/ubuntu questing/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
 90s Get:33 http://ftpmaster.internal/ubuntu questing/universe amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB]
 90s Get:34 http://ftpmaster.internal/ubuntu questing/universe amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
 90s Get:35 http://ftpmaster.internal/ubuntu questing/universe amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B]
 90s Get:36 http://ftpmaster.internal/ubuntu questing/universe amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
 90s Get:37 http://ftpmaster.internal/ubuntu questing/universe amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB]
 90s Get:38 http://ftpmaster.internal/ubuntu questing/universe amd64 libjs-json all 0~20221030+~1.0.8-1 [20.6 kB]
 90s Get:39 http://ftpmaster.internal/ubuntu questing/universe amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB]
 90s Get:40 http://ftpmaster.internal/ubuntu questing/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB]
 90s Get:41 http://ftpmaster.internal/ubuntu questing/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB]
 90s Get:42 http://ftpmaster.internal/ubuntu questing/main amd64 liblua5.4-0 amd64 5.4.7-1 [196 kB]
 90s Get:43 http://ftpmaster.internal/ubuntu questing/main amd64 libthai-data all 0.1.29-2build1 [158 kB]
 90s Get:44 http://ftpmaster.internal/ubuntu questing/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB]
 90s Get:45 http://ftpmaster.internal/ubuntu questing/main amd64 libpango-1.0-0 amd64 1.56.3-1 [256 kB]
 90s Get:46 http://ftpmaster.internal/ubuntu questing/main amd64 libpangoft2-1.0-0 amd64 1.56.3-1 [52.9 kB]
 90s Get:47 http://ftpmaster.internal/ubuntu questing/main amd64 libpangocairo-1.0-0 amd64 1.56.3-1 [29.1 kB]
 90s Get:48 http://ftpmaster.internal/ubuntu questing/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB]
 90s Get:49 http://ftpmaster.internal/ubuntu questing/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB]
 90s Get:50 http://ftpmaster.internal/ubuntu questing/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB]
 90s Get:51 http://ftpmaster.internal/ubuntu questing/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB]
 90s Get:52 http://ftpmaster.internal/ubuntu questing/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB]
 90s Get:53 http://ftpmaster.internal/ubuntu questing/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB]
 90s Get:54 http://ftpmaster.internal/ubuntu questing/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB]
 90s Get:55 http://ftpmaster.internal/ubuntu questing/main amd64 libtiff6 amd64 4.7.0-3ubuntu1 [204 kB]
 90s Get:56 http://ftpmaster.internal/ubuntu questing/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB]
 90s Get:57 http://ftpmaster.internal/ubuntu questing/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B]
 90s Get:58 http://ftpmaster.internal/ubuntu questing/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB]
 90s Get:59 http://ftpmaster.internal/ubuntu questing/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB]
 90s Get:60 http://ftpmaster.internal/ubuntu questing/main amd64 zip amd64 3.0-14ubuntu2 [185 kB]
 90s Get:61 http://ftpmaster.internal/ubuntu questing/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB]
 90s Get:62 http://ftpmaster.internal/ubuntu questing/main amd64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
 90s Get:63 http://ftpmaster.internal/ubuntu questing/universe amd64 r-base-core amd64 4.4.3-1 [28.9 MB]
 91s Get:64 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB]
 91s Get:65 http://ftpmaster.internal/ubuntu questing/universe amd64 littler all 0.3.20-2 [2554 B]
 91s Get:66 http://ftpmaster.internal/ubuntu questing/universe amd64 node-bootstrap-sass all 3.4.3-2 [187 kB]
 91s Get:67 http://ftpmaster.internal/ubuntu questing/universe amd64 node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
 91s Get:68 http://ftpmaster.internal/ubuntu questing/universe amd64 node-normalize.css all 8.0.1-5 [10.8 kB]
 91s Get:69 http://ftpmaster.internal/ubuntu questing/universe amd64 pandoc-data all 3.1.11.1-3build1 [78.8 kB]
 91s Get:70 http://ftpmaster.internal/ubuntu questing/universe amd64 pandoc amd64 3.1.11.1+ds-2 [27.2 MB]
 92s Get:71 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-abind all 1.4-8-1 [66.9 kB]
 92s Get:72 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-backports amd64 1.5.0-2 [121 kB]
 92s Get:73 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-base64enc amd64 0.1-3-3 [27.6 kB]
 92s Get:74 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-numderiv all 2016.8-1.1-3 [115 kB]
 92s Get:75 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB]
 92s Get:76 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-mass amd64 7.3-65-1 [1116 kB]
 92s Get:77 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-bdsmatrix amd64 1.3-7-1 [299 kB]
 92s Get:78 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-matrix amd64 1.7-3-1 [4349 kB]
 93s Get:79 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-mvtnorm amd64 1.3-3-1 [923 kB]
 93s Get:80 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-bbmle all 1.0.25.1-1 [854 kB]
 93s Get:81 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-bit amd64 4.6.0+dfsg-1 [466 kB]
 93s Get:82 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-bit64 amd64 4.6.0-1-1ubuntu2 [501 kB]
 93s Get:83 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-boot all 1.3-31-1 [635 kB]
 93s Get:84 http://ftpmaster.internal/ubuntu questing-proposed/universe amd64 r-cran-nlme amd64 3.1.168-1 [2320 kB]
 93s Get:85 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
 93s Get:86 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB]
 93s Get:87 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-minqa amd64 1.2.8-1 [119 kB]
 93s Get:88 http://ftpmaster.internal/ubuntu questing/universe amd64 libnlopt0 amd64 2.7.1-6ubuntu3 [251 kB]
 93s Get:89 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-nloptr amd64 2.2.1-1 [251 kB]
 93s Get:90 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB]
 93s Get:91 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-rdpack all 2.6.3-1 [636 kB]
 93s Get:92 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-reformulas all 0.4.1-1 [128 kB]
 93s Get:93 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB]
 93s Get:94 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB]
 93s Get:95 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-lme4 amd64 1.1-36-1 [4135 kB]
 93s Get:96 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-blme all 1.0-6-1 [429 kB]
 93s Get:97 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-brio amd64 1.1.5-1 [39.0 kB]
 93s Get:98 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-cli amd64 3.6.4-1 [1394 kB]
 93s Get:99 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-generics all 0.1.3-1 [81.3 kB]
 93s Get:100 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-glue amd64 1.8.0-1 [164 kB]
 93s Get:101 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-rlang amd64 1.1.5-1 [1719 kB]
 93s Get:102 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
 94s Get:103 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-magrittr amd64 2.0.3-1 [154 kB]
 94s Get:104 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-utf8 amd64 1.2.4-1 [140 kB]
 94s Get:105 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-vctrs amd64 0.6.5-1 [1335 kB]
 94s Get:106 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-pillar all 1.10.1+dfsg-1 [453 kB]
 94s Get:107 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-r6 all 2.6.1-1 [101 kB]
 94s Get:108 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-fansi amd64 1.0.6-1ubuntu1 [632 kB]
 94s Get:109 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB]
 94s Get:110 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-tibble amd64 3.2.1+dfsg-3 [419 kB]
 94s Get:111 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-withr all 3.0.2+dfsg-1 [214 kB]
 94s Get:112 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [222 kB]
 94s Get:113 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-dplyr amd64 1.1.4-4 [1536 kB]
 94s Get:114 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-purrr amd64 1.0.4-1 [552 kB]
 94s Get:115 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-stringi amd64 1.8.4-1build1 [927 kB]
 94s Get:116 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-stringr all 1.5.1-1 [290 kB]
 94s Get:117 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-cpp11 all 0.5.2-1 [233 kB]
 94s Get:118 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-tidyr amd64 1.3.1-1 [1156 kB]
 94s Get:119 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-broom all 1.0.7+dfsg-1 [1802 kB]
 95s Get:120 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-coda all 0.19-4.1-1 [321 kB]
 95s Get:121 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-ellipsis amd64 0.3.2-2 [35.6 kB]
 95s Get:122 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-forcats all 1.0.0-1 [369 kB]
 95s Get:123 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-digest amd64 0.6.37-1 [200 kB]
 95s Get:124 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-codetools all 0.2-20-1 [90.5 kB]
 95s Get:125 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-globals all 0.16.3-1 [120 kB]
 95s Get:126 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB]
 95s Get:127 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-parallelly amd64 1.42.0-1 [540 kB]
 95s Get:128 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-future all 1.34.0+dfsg-1 [646 kB]
 95s Get:129 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-furrr all 0.3.1-1 [753 kB]
 95s Get:130 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-broom.mixed all 0.2.9.6-3 [5324 kB]
 95s Get:131 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-fastmap amd64 1.2.0-1 [73.8 kB]
 95s Get:132 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-cachem amd64 1.1.0-1 [74.1 kB]
 95s Get:133 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-htmltools amd64 0.5.8.1-1 [373 kB]
 95s Get:134 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB]
 95s Get:135 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-jsonlite amd64 1.9.1+dfsg-1 [447 kB]
 95s Get:136 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-memoise all 2.0.1-1 [53.9 kB]
 95s Get:137 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-mime amd64 0.12-2 [35.8 kB]
 95s Get:138 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-fs amd64 1.6.5+dfsg-1 [246 kB]
 95s Get:139 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-rappdirs amd64 0.3.3-1 [47.5 kB]
 95s Get:140 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-sass amd64 0.4.9+dfsg-1 [1001 kB]
 95s Get:141 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-bslib all 0.9.0+dfsg-1syncable1 [4563 kB]
 96s Get:142 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-ps amd64 1.9.0-1 [408 kB]
 96s Get:143 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-processx amd64 3.8.6-1 [365 kB]
 96s Get:144 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-callr all 3.7.6-1 [458 kB]
 96s Get:145 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-cardata all 3.0.5-1 [1819 kB]
 96s Get:146 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-formula all 1.2-5-1 [158 kB]
 96s Get:147 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB]
 96s Get:148 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-nnet amd64 7.3-20-1 [116 kB]
 96s Get:149 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-gtable all 0.3.6+dfsg-1 [199 kB]
 96s Get:150 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-isoband amd64 0.2.7-1 [1481 kB]
 96s Get:151 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-farver amd64 2.1.2-1 [1355 kB]
 96s Get:152 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-labeling all 0.4.3-1 [62.1 kB]
 96s Get:153 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-colorspace amd64 2.1-1+dfsg-1 [1563 kB]
 96s Get:154 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-munsell all 0.5.1-1 [213 kB]
 96s Get:155 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB]
 96s Get:156 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-viridislite all 0.4.2-2 [1088 kB]
 96s Get:157 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-scales all 1.3.0-1 [603 kB]
 96s Get:158 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB]
 97s Get:159 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-cowplot all 1.1.3+dfsg-1 [614 kB]
 97s Get:160 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-deriv all 4.1.6-1 [151 kB]
 97s Get:161 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-modelr all 0.1.11-1 [195 kB]
 97s Get:162 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-microbenchmark amd64 1.5.0-1 [67.4 kB]
 97s Get:163 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-doby all 4.6.26-1 [4804 kB]
 97s Get:164 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-evaluate all 1.0.3-1 [114 kB]
 97s Get:165 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-xfun amd64 0.51+dfsg-1 [574 kB]
 97s Get:166 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-highr all 0.11+dfsg-1 [38.5 kB]
 97s Get:167 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-yaml amd64 2.3.10-1 [109 kB]
 97s Get:168 http://ftpmaster.internal/ubuntu questing/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5665 kB]
 97s Get:169 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-knitr all 1.50+dfsg-1 [840 kB]
 98s Get:170 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-pbkrtest all 0.5.3-1 [178 kB]
 98s Get:171 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-sparsem amd64 1.84-2-1 [813 kB]
 98s Get:172 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-matrixmodels all 0.5-3-1 [361 kB]
 98s Get:173 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-survival amd64 3.8-3-1 [8239 kB]
 98s Get:174 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-matrixstats amd64 1.5.0-1 [542 kB]
 98s Get:175 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-rcpparmadillo amd64 14.4.0-1-1 [868 kB]
 98s Get:176 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-class amd64 7.3-23-1 [92.7 kB]
 98s Get:177 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-proxy amd64 0.4-27-1 [182 kB]
 98s Get:178 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-e1071 amd64 1.7-16-1 [565 kB]
 98s Get:179 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-iterators all 1.0.14-1 [336 kB]
 98s Get:180 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-foreach all 1.5.2-1 [124 kB]
 98s Get:181 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-data.table amd64 1.17.0+dfsg-1 [2168 kB]
 98s Get:182 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-modelmetrics amd64 1.2.2.2-1build1 [128 kB]
 98s Get:183 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-plyr amd64 1.8.9-1 [832 kB]
 99s Get:184 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-proc amd64 1.18.5-1 [966 kB]
 99s Get:185 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-tzdb amd64 0.5.0-1 [538 kB]
 99s Get:186 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-clock amd64 0.7.2-1 [1903 kB]
 99s Get:187 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-gower amd64 1.0.2-1 [210 kB]
 99s Get:188 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-sparsevctrs amd64 0.2.0-2 [170 kB]
 99s Get:189 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-hardhat all 1.4.1+dfsg-1 [594 kB]
 99s Get:190 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-rpart amd64 4.1.24-1 [670 kB]
 99s Get:191 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-shape all 1.4.6.1-1 [749 kB]
 99s Get:192 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-diagram all 1.6.5-2 [656 kB]
 99s Get:193 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-kernsmooth amd64 2.23-26-1 [94.5 kB]
 99s Get:194 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-future.apply all 1.11.3+dfsg-1 [175 kB]
 99s Get:195 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-progressr all 0.15.1-1 [353 kB]
 99s Get:196 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-squarem all 2021.1-1 [179 kB]
 99s Get:197 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-lava all 1.8.1+dfsg-1 [2191 kB]
 99s Get:198 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-prodlim amd64 2024.06.25-1 [415 kB]
 99s Get:199 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-ipred amd64 0.9-15-1 [386 kB]
 99s Get:200 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-timechange amd64 0.3.0-1 [178 kB]
 99s Get:201 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-lubridate amd64 1.9.4+dfsg-1 [1009 kB]
 99s Get:202 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-timedate amd64 4041.110-1 [1208 kB]
100s Get:203 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-recipes all 1.1.0+dfsg-1 [2035 kB]
100s Get:204 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-reshape2 amd64 1.4.4-2build1 [114 kB]
100s Get:205 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-caret amd64 7.0-1+dfsg-1 [3460 kB]
100s Get:206 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-conquer amd64 1.3.3-1 [499 kB]
100s Get:207 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-quantreg amd64 6.1-1 [1455 kB]
100s Get:208 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-foreign amd64 0.8.90-1 [250 kB]
100s Get:209 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-hms all 1.1.3-1 [96.5 kB]
100s Get:210 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-clipr all 0.8.0-1 [53.5 kB]
100s Get:211 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-crayon all 1.5.3-1 [165 kB]
100s Get:212 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-prettyunits all 1.2.0-1 [162 kB]
100s Get:213 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-progress all 1.2.3-1 [91.9 kB]
100s Get:214 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-vroom amd64 1.6.5-1 [848 kB]
100s Get:215 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-readr amd64 2.1.5-1 [766 kB]
100s Get:216 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-haven amd64 2.5.4-1 [346 kB]
100s Get:217 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-curl amd64 6.2.1+dfsg-1ubuntu1 [197 kB]
100s Get:218 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-rematch all 2.0.0-1 [18.3 kB]
100s Get:219 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-cellranger all 1.1.0-3 [102 kB]
100s Get:220 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-readxl amd64 1.4.5-1 [361 kB]
100s Get:221 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-writexl amd64 1.5.2-1 [167 kB]
100s Get:222 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-r.methodss3 all 1.8.2-1 [84.0 kB]
100s Get:223 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-r.oo all 1.27.0-1 [979 kB]
100s Get:224 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-r.utils all 2.13.0-1 [1423 kB]
100s Get:225 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-zip amd64 2.3.2-1 [156 kB]
100s Get:226 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-openxlsx amd64 4.2.8-1 [2056 kB]
101s Get:227 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-rio all 1.2.3-1 [546 kB]
101s Get:228 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-car all 3.1-3-1 [1525 kB]
101s Get:229 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-commonmark amd64 1.9.5-1 [138 kB]
101s Get:230 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-dbi all 1.2.3-1 [853 kB]
101s Get:231 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-desc all 1.4.3-1 [359 kB]
101s Get:232 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-diffobj amd64 0.3.5-1 [1117 kB]
101s Get:233 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-mitools all 2.4-2build1 [265 kB]
101s Get:234 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-survey amd64 4.4-2-2 [3453 kB]
101s Get:235 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-estimability all 1.5.1-1 [50.9 kB]
101s Get:236 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-insight all 1.1.0+dfsg-1 [2175 kB]
101s Get:237 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-effects all 4.2.2-1 [2337 kB]
101s Get:238 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-emmeans all 1.10.7+dfsg-1 [1665 kB]
101s Get:239 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-fontawesome all 0.5.3-1 [1331 kB]
101s Get:240 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-tmb amd64 1.9.17-1 [1205 kB]
101s Get:241 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-glmmtmb amd64 1.1.10+dfsg-1build2 [5892 kB]
101s Get:242 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-later amd64 1.4.1+dfsg-1 [154 kB]
101s Get:243 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-promises amd64 1.3.2+dfsg-1 [291 kB]
101s Get:244 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [510 kB]
101s Get:245 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-mlmrev all 1.0-8-2build1 [1806 kB]
101s Get:246 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-th.data all 1.1-3-1 [8723 kB]
101s Get:247 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-zoo amd64 1.8-13-1 [999 kB]
101s Get:248 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-sandwich all 3.1-1-1 [1483 kB]
101s Get:249 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-multcomp all 1.4-28-1 [700 kB]
101s Get:250 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-pkgbuild all 1.4.6-1 [213 kB]
101s Get:251 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-rprojroot all 2.0.4-2 [125 kB]
101s Get:252 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-pkgload all 1.4.0-1 [247 kB]
101s Get:253 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-png amd64 0.1-8-1build2 [40.6 kB]
101s Get:254 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-praise all 1.0.0-4build1 [20.3 kB]
101s Get:255 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-pscl amd64 1.5.9-1 [3381 kB]
102s Get:256 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-tinytex all 0.56-1 [148 kB]
102s Get:257 http://ftpmaster.internal/ubuntu questing/universe amd64 libjs-modernizr all 3.13.0-0.1 [101 kB]
102s Get:258 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-xtable all 1:1.8-4-2 [689 kB]
102s Get:259 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-sourcetools amd64 0.1.7-1-1 [48.1 kB]
102s Get:260 http://ftpmaster.internal/ubuntu questing/universe amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
102s Get:261 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-shiny all 1.10.0+dfsg-2 [3124 kB]
102s Get:262 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB]
102s Get:263 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-waldo all 0.6.1-2 [150 kB]
102s Get:264 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-testthat amd64 3.2.3-1 [1651 kB]
102s Preconfiguring packages ...
102s Fetched 250 MB in 13s (19.2 MB/s)
103s Selecting previously unselected package fonts-dejavu-mono.
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103s Preparing to unpack .../000-fonts-dejavu-mono_2.37-8_all.deb ...
103s Unpacking fonts-dejavu-mono (2.37-8) ...
103s Selecting previously unselected package fonts-dejavu-core.
103s Preparing to unpack .../001-fonts-dejavu-core_2.37-8_all.deb ...
103s Unpacking fonts-dejavu-core (2.37-8) ...
103s Selecting previously unselected package fontconfig-config.
103s Preparing to unpack .../002-fontconfig-config_2.15.0-2.2ubuntu1_amd64.deb ...
103s Unpacking fontconfig-config (2.15.0-2.2ubuntu1) ...
103s Selecting previously unselected package libfontconfig1:amd64.
103s Preparing to unpack .../003-libfontconfig1_2.15.0-2.2ubuntu1_amd64.deb ...
103s Unpacking libfontconfig1:amd64 (2.15.0-2.2ubuntu1) ...
103s Selecting previously unselected package fontconfig.
103s Preparing to unpack .../004-fontconfig_2.15.0-2.2ubuntu1_amd64.deb ...
103s Unpacking fontconfig (2.15.0-2.2ubuntu1) ...
103s Selecting previously unselected package fonts-font-awesome.
103s Preparing to unpack .../005-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ...
103s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ...
103s Selecting previously unselected package fonts-glyphicons-halflings.
103s Preparing to unpack .../006-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ...
103s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
103s Selecting previously unselected package fonts-mathjax.
103s Preparing to unpack .../007-fonts-mathjax_2.7.9+dfsg-1_all.deb ...
103s Unpacking fonts-mathjax (2.7.9+dfsg-1) ...
103s Selecting previously unselected package javascript-common.
103s Preparing to unpack .../008-javascript-common_12_all.deb ...
103s Unpacking javascript-common (12) ...
103s Selecting previously unselected package libblas3:amd64.
103s Preparing to unpack .../009-libblas3_3.12.1-2_amd64.deb ...
103s Unpacking libblas3:amd64 (3.12.1-2) ...
103s Selecting previously unselected package libpixman-1-0:amd64.
103s Preparing to unpack .../010-libpixman-1-0_0.44.0-3_amd64.deb ...
103s Unpacking libpixman-1-0:amd64 (0.44.0-3) ...
103s Selecting previously unselected package libxcb-render0:amd64.
103s Preparing to unpack .../011-libxcb-render0_1.17.0-2_amd64.deb ...
103s Unpacking libxcb-render0:amd64 (1.17.0-2) ...
103s Selecting previously unselected package libxcb-shm0:amd64.
103s Preparing to unpack .../012-libxcb-shm0_1.17.0-2_amd64.deb ...
103s Unpacking libxcb-shm0:amd64 (1.17.0-2) ...
104s Selecting previously unselected package libxrender1:amd64.
104s Preparing to unpack .../013-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ...
104s Unpacking libxrender1:amd64 (1:0.9.10-1.1build1) ...
104s Selecting previously unselected package libcairo2:amd64.
104s Preparing to unpack .../014-libcairo2_1.18.4-1_amd64.deb ...
104s Unpacking libcairo2:amd64 (1.18.4-1) ...
104s Selecting previously unselected package libdatrie1:amd64.
104s Preparing to unpack .../015-libdatrie1_0.2.13-3build1_amd64.deb ...
104s Unpacking libdatrie1:amd64 (0.2.13-3build1) ...
104s Selecting previously unselected package libdeflate0:amd64.
104s Preparing to unpack .../016-libdeflate0_1.23-2_amd64.deb ...
104s Unpacking libdeflate0:amd64 (1.23-2) ...
104s Selecting previously unselected package libgfortran5:amd64.
104s Preparing to unpack .../017-libgfortran5_15-20250404-0ubuntu1_amd64.deb ...
104s Unpacking libgfortran5:amd64 (15-20250404-0ubuntu1) ...
104s Selecting previously unselected package libgomp1:amd64.
104s Preparing to unpack .../018-libgomp1_15-20250404-0ubuntu1_amd64.deb ...
104s Unpacking libgomp1:amd64 (15-20250404-0ubuntu1) ...
104s Selecting previously unselected package libgraphite2-3:amd64.
104s Preparing to unpack .../019-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ...
104s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ...
104s Selecting previously unselected package libharfbuzz0b:amd64.
104s Preparing to unpack .../020-libharfbuzz0b_10.2.0-1_amd64.deb ...
104s Unpacking libharfbuzz0b:amd64 (10.2.0-1) ...
104s Selecting previously unselected package x11-common.
104s Preparing to unpack .../021-x11-common_1%3a7.7+23ubuntu4_all.deb ...
104s Unpacking x11-common (1:7.7+23ubuntu4) ...
104s Selecting previously unselected package libice6:amd64.
104s Preparing to unpack .../022-libice6_2%3a1.1.1-1_amd64.deb ...
104s Unpacking libice6:amd64 (2:1.1.1-1) ...
104s Selecting previously unselected package libjpeg-turbo8:amd64.
104s Preparing to unpack .../023-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ...
104s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ...
104s Selecting previously unselected package libjpeg8:amd64.
104s Preparing to unpack .../024-libjpeg8_8c-2ubuntu11_amd64.deb ...
104s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ...
104s Selecting previously unselected package libjs-bootstrap.
104s Preparing to unpack .../025-libjs-bootstrap_3.4.1+dfsg-3_all.deb ...
104s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ...
104s Selecting previously unselected package libjs-popper.js.
104s Preparing to unpack .../026-libjs-popper.js_1.16.1+ds-6_all.deb ...
104s Unpacking libjs-popper.js (1.16.1+ds-6) ...
104s Selecting previously unselected package libjs-bootstrap4.
104s Preparing to unpack .../027-libjs-bootstrap4_4.6.1+dfsg1-5_all.deb ...
104s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-5) ...
104s Selecting previously unselected package libjs-d3.
104s Preparing to unpack .../028-libjs-d3_3.5.17-4_all.deb ...
104s Unpacking libjs-d3 (3.5.17-4) ...
104s Selecting previously unselected package libjs-es5-shim.
104s Preparing to unpack .../029-libjs-es5-shim_4.6.7-2_all.deb ...
104s Unpacking libjs-es5-shim (4.6.7-2) ...
104s Selecting previously unselected package libjs-highlight.js.
104s Preparing to unpack .../030-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ...
104s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ...
104s Selecting previously unselected package libjs-jquery.
104s Preparing to unpack .../031-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ...
104s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
104s Selecting previously unselected package libjs-jquery-datatables.
104s Preparing to unpack .../032-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ...
104s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ...
104s Selecting previously unselected package libjs-sifter.js.
104s Preparing to unpack .../033-libjs-sifter.js_0.6.0+dfsg-3_all.deb ...
104s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ...
104s Selecting previously unselected package libjs-microplugin.js.
104s Preparing to unpack .../034-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ...
104s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ...
104s Selecting previously unselected package libjs-jquery-selectize.js.
104s Preparing to unpack .../035-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ...
104s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ...
104s Selecting previously unselected package libjs-jquery-ui.
104s Preparing to unpack .../036-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ...
104s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ...
104s Selecting previously unselected package libjs-json.
104s Preparing to unpack .../037-libjs-json_0~20221030+~1.0.8-1_all.deb ...
104s Unpacking libjs-json (0~20221030+~1.0.8-1) ...
104s Selecting previously unselected package libjs-prettify.
104s Preparing to unpack .../038-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ...
104s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ...
104s Selecting previously unselected package liblapack3:amd64.
104s Preparing to unpack .../039-liblapack3_3.12.1-2_amd64.deb ...
104s Unpacking liblapack3:amd64 (3.12.1-2) ...
105s Selecting previously unselected package liblerc4:amd64.
105s Preparing to unpack .../040-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ...
105s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ...
105s Selecting previously unselected package liblua5.4-0:amd64.
105s Preparing to unpack .../041-liblua5.4-0_5.4.7-1_amd64.deb ...
105s Unpacking liblua5.4-0:amd64 (5.4.7-1) ...
105s Selecting previously unselected package libthai-data.
105s Preparing to unpack .../042-libthai-data_0.1.29-2build1_all.deb ...
105s Unpacking libthai-data (0.1.29-2build1) ...
105s Selecting previously unselected package libthai0:amd64.
105s Preparing to unpack .../043-libthai0_0.1.29-2build1_amd64.deb ...
105s Unpacking libthai0:amd64 (0.1.29-2build1) ...
105s Selecting previously unselected package libpango-1.0-0:amd64.
105s Preparing to unpack .../044-libpango-1.0-0_1.56.3-1_amd64.deb ...
105s Unpacking libpango-1.0-0:amd64 (1.56.3-1) ...
105s Selecting previously unselected package libpangoft2-1.0-0:amd64.
105s Preparing to unpack .../045-libpangoft2-1.0-0_1.56.3-1_amd64.deb ...
105s Unpacking libpangoft2-1.0-0:amd64 (1.56.3-1) ...
105s Selecting previously unselected package libpangocairo-1.0-0:amd64.
105s Preparing to unpack .../046-libpangocairo-1.0-0_1.56.3-1_amd64.deb ...
105s Unpacking libpangocairo-1.0-0:amd64 (1.56.3-1) ...
105s Selecting previously unselected package libpaper2:amd64.
105s Preparing to unpack .../047-libpaper2_2.2.5-0.3_amd64.deb ...
105s Unpacking libpaper2:amd64 (2.2.5-0.3) ...
105s Selecting previously unselected package libpaper-utils.
105s Preparing to unpack .../048-libpaper-utils_2.2.5-0.3_amd64.deb ...
105s Unpacking libpaper-utils (2.2.5-0.3) ...
105s Selecting previously unselected package libsharpyuv0:amd64.
105s Preparing to unpack .../049-libsharpyuv0_1.5.0-0.1_amd64.deb ...
105s Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ...
105s Selecting previously unselected package libsm6:amd64.
105s Preparing to unpack .../050-libsm6_2%3a1.2.4-1_amd64.deb ...
105s Unpacking libsm6:amd64 (2:1.2.4-1) ...
105s Selecting previously unselected package libtcl8.6:amd64.
105s Preparing to unpack .../051-libtcl8.6_8.6.16+dfsg-1_amd64.deb ...
105s Unpacking libtcl8.6:amd64 (8.6.16+dfsg-1) ...
105s Selecting previously unselected package libjbig0:amd64.
105s Preparing to unpack .../052-libjbig0_2.1-6.1ubuntu2_amd64.deb ...
105s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ...
105s Selecting previously unselected package libwebp7:amd64.
105s Preparing to unpack .../053-libwebp7_1.5.0-0.1_amd64.deb ...
105s Unpacking libwebp7:amd64 (1.5.0-0.1) ...
105s Selecting previously unselected package libtiff6:amd64.
105s Preparing to unpack .../054-libtiff6_4.7.0-3ubuntu1_amd64.deb ...
105s Unpacking libtiff6:amd64 (4.7.0-3ubuntu1) ...
105s Selecting previously unselected package libxft2:amd64.
105s Preparing to unpack .../055-libxft2_2.3.6-1build1_amd64.deb ...
105s Unpacking libxft2:amd64 (2.3.6-1build1) ...
105s Selecting previously unselected package libxss1:amd64.
105s Preparing to unpack .../056-libxss1_1%3a1.2.3-1build3_amd64.deb ...
105s Unpacking libxss1:amd64 (1:1.2.3-1build3) ...
105s Selecting previously unselected package libtk8.6:amd64.
105s Preparing to unpack .../057-libtk8.6_8.6.16-1_amd64.deb ...
105s Unpacking libtk8.6:amd64 (8.6.16-1) ...
105s Selecting previously unselected package libxt6t64:amd64.
105s Preparing to unpack .../058-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ...
105s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ...
105s Selecting previously unselected package zip.
105s Preparing to unpack .../059-zip_3.0-14ubuntu2_amd64.deb ...
105s Unpacking zip (3.0-14ubuntu2) ...
105s Selecting previously unselected package unzip.
105s Preparing to unpack .../060-unzip_6.0-28ubuntu6_amd64.deb ...
105s Unpacking unzip (6.0-28ubuntu6) ...
105s Selecting previously unselected package xdg-utils.
105s Preparing to unpack .../061-xdg-utils_1.2.1-2ubuntu1_all.deb ...
105s Unpacking xdg-utils (1.2.1-2ubuntu1) ...
105s Selecting previously unselected package r-base-core.
105s Preparing to unpack .../062-r-base-core_4.4.3-1_amd64.deb ...
105s Unpacking r-base-core (4.4.3-1) ...
106s Selecting previously unselected package r-cran-littler.
106s Preparing to unpack .../063-r-cran-littler_0.3.20-2_amd64.deb ...
106s Unpacking r-cran-littler (0.3.20-2) ...
106s Selecting previously unselected package littler.
106s Preparing to unpack .../064-littler_0.3.20-2_all.deb ...
106s Unpacking littler (0.3.20-2) ...
106s Selecting previously unselected package node-bootstrap-sass.
106s Preparing to unpack .../065-node-bootstrap-sass_3.4.3-2_all.deb ...
106s Unpacking node-bootstrap-sass (3.4.3-2) ...
106s Selecting previously unselected package node-html5shiv.
106s Preparing to unpack .../066-node-html5shiv_3.7.3+dfsg-5_all.deb ...
106s Unpacking node-html5shiv (3.7.3+dfsg-5) ...
106s Selecting previously unselected package node-normalize.css.
106s Preparing to unpack .../067-node-normalize.css_8.0.1-5_all.deb ...
106s Unpacking node-normalize.css (8.0.1-5) ...
106s Selecting previously unselected package pandoc-data.
106s Preparing to unpack .../068-pandoc-data_3.1.11.1-3build1_all.deb ...
106s Unpacking pandoc-data (3.1.11.1-3build1) ...
106s Selecting previously unselected package pandoc.
106s Preparing to unpack .../069-pandoc_3.1.11.1+ds-2_amd64.deb ...
106s Unpacking pandoc (3.1.11.1+ds-2) ...
107s Selecting previously unselected package r-cran-abind.
107s Preparing to unpack .../070-r-cran-abind_1.4-8-1_all.deb ...
107s Unpacking r-cran-abind (1.4-8-1) ...
107s Selecting previously unselected package r-cran-backports.
107s Preparing to unpack .../071-r-cran-backports_1.5.0-2_amd64.deb ...
107s Unpacking r-cran-backports (1.5.0-2) ...
107s Selecting previously unselected package r-cran-base64enc.
107s Preparing to unpack .../072-r-cran-base64enc_0.1-3-3_amd64.deb ...
107s Unpacking r-cran-base64enc (0.1-3-3) ...
107s Selecting previously unselected package r-cran-numderiv.
107s Preparing to unpack .../073-r-cran-numderiv_2016.8-1.1-3_all.deb ...
107s Unpacking r-cran-numderiv (2016.8-1.1-3) ...
107s Selecting previously unselected package r-cran-lattice.
107s Preparing to unpack .../074-r-cran-lattice_0.22-6-1_amd64.deb ...
107s Unpacking r-cran-lattice (0.22-6-1) ...
107s Selecting previously unselected package r-cran-mass.
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107s Selecting previously unselected package r-cran-bdsmatrix.
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107s Selecting previously unselected package r-cran-matrix.
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107s Selecting previously unselected package r-cran-mvtnorm.
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107s Selecting previously unselected package r-cran-bbmle.
107s Preparing to unpack .../079-r-cran-bbmle_1.0.25.1-1_all.deb ...
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107s Selecting previously unselected package r-cran-bit.
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107s Selecting previously unselected package r-cran-bit64.
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107s Selecting previously unselected package r-cran-nlme.
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107s Selecting previously unselected package r-cran-pkgkitten.
107s Preparing to unpack .../084-r-cran-pkgkitten_0.2.4-1_all.deb ...
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107s Selecting previously unselected package r-cran-rcpp.
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107s Selecting previously unselected package r-cran-minqa.
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107s Selecting previously unselected package libnlopt0:amd64.
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107s Selecting previously unselected package r-cran-nloptr.
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107s Selecting previously unselected package r-cran-rbibutils.
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108s Selecting previously unselected package r-cran-reformulas.
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108s Selecting previously unselected package r-cran-rcppeigen.
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108s Selecting previously unselected package r-cran-statmod.
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108s Selecting previously unselected package r-cran-lme4.
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108s Selecting previously unselected package r-cran-blme.
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108s Selecting previously unselected package r-cran-brio.
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108s Selecting previously unselected package r-cran-cli.
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108s Selecting previously unselected package r-cran-generics.
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108s Selecting previously unselected package r-cran-glue.
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108s Selecting previously unselected package r-cran-rlang.
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108s Selecting previously unselected package r-cran-lifecycle.
108s Preparing to unpack .../101-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ...
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108s Selecting previously unselected package r-cran-magrittr.
108s Preparing to unpack .../102-r-cran-magrittr_2.0.3-1_amd64.deb ...
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108s Selecting previously unselected package r-cran-utf8.
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108s Selecting previously unselected package r-cran-vctrs.
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108s Selecting previously unselected package r-cran-pillar.
108s Preparing to unpack .../105-r-cran-pillar_1.10.1+dfsg-1_all.deb ...
108s Unpacking r-cran-pillar (1.10.1+dfsg-1) ...
108s Selecting previously unselected package r-cran-r6.
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109s Selecting previously unselected package r-cran-fansi.
109s Preparing to unpack .../107-r-cran-fansi_1.0.6-1ubuntu1_amd64.deb ...
109s Unpacking r-cran-fansi (1.0.6-1ubuntu1) ...
109s Selecting previously unselected package r-cran-pkgconfig.
109s Preparing to unpack .../108-r-cran-pkgconfig_2.0.3-2build1_all.deb ...
109s Unpacking r-cran-pkgconfig (2.0.3-2build1) ...
109s Selecting previously unselected package r-cran-tibble.
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109s Selecting previously unselected package r-cran-withr.
109s Preparing to unpack .../110-r-cran-withr_3.0.2+dfsg-1_all.deb ...
109s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
109s Selecting previously unselected package r-cran-tidyselect.
109s Preparing to unpack .../111-r-cran-tidyselect_1.2.1+dfsg-1_amd64.deb ...
109s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ...
109s Selecting previously unselected package r-cran-dplyr.
109s Preparing to unpack .../112-r-cran-dplyr_1.1.4-4_amd64.deb ...
109s Unpacking r-cran-dplyr (1.1.4-4) ...
109s Selecting previously unselected package r-cran-purrr.
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109s Selecting previously unselected package r-cran-stringi.
109s Preparing to unpack .../114-r-cran-stringi_1.8.4-1build1_amd64.deb ...
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109s Selecting previously unselected package r-cran-stringr.
109s Preparing to unpack .../115-r-cran-stringr_1.5.1-1_all.deb ...
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109s Selecting previously unselected package r-cran-cpp11.
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109s Selecting previously unselected package r-cran-tidyr.
109s Preparing to unpack .../117-r-cran-tidyr_1.3.1-1_amd64.deb ...
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109s Selecting previously unselected package r-cran-broom.
109s Preparing to unpack .../118-r-cran-broom_1.0.7+dfsg-1_all.deb ...
109s Unpacking r-cran-broom (1.0.7+dfsg-1) ...
109s Selecting previously unselected package r-cran-coda.
109s Preparing to unpack .../119-r-cran-coda_0.19-4.1-1_all.deb ...
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109s Selecting previously unselected package r-cran-ellipsis.
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109s Selecting previously unselected package r-cran-forcats.
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109s Selecting previously unselected package r-cran-digest.
109s Preparing to unpack .../122-r-cran-digest_0.6.37-1_amd64.deb ...
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109s Selecting previously unselected package r-cran-codetools.
109s Preparing to unpack .../123-r-cran-codetools_0.2-20-1_all.deb ...
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109s Selecting previously unselected package r-cran-globals.
109s Preparing to unpack .../124-r-cran-globals_0.16.3-1_all.deb ...
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109s Selecting previously unselected package r-cran-listenv.
109s Preparing to unpack .../125-r-cran-listenv_0.9.1+dfsg-1_all.deb ...
109s Unpacking r-cran-listenv (0.9.1+dfsg-1) ...
109s Selecting previously unselected package r-cran-parallelly.
110s Preparing to unpack .../126-r-cran-parallelly_1.42.0-1_amd64.deb ...
110s Unpacking r-cran-parallelly (1.42.0-1) ...
110s Selecting previously unselected package r-cran-future.
110s Preparing to unpack .../127-r-cran-future_1.34.0+dfsg-1_all.deb ...
110s Unpacking r-cran-future (1.34.0+dfsg-1) ...
110s Selecting previously unselected package r-cran-furrr.
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110s Unpacking r-cran-furrr (0.3.1-1) ...
110s Selecting previously unselected package r-cran-broom.mixed.
110s Preparing to unpack .../129-r-cran-broom.mixed_0.2.9.6-3_all.deb ...
110s Unpacking r-cran-broom.mixed (0.2.9.6-3) ...
110s Selecting previously unselected package r-cran-fastmap.
110s Preparing to unpack .../130-r-cran-fastmap_1.2.0-1_amd64.deb ...
110s Unpacking r-cran-fastmap (1.2.0-1) ...
110s Selecting previously unselected package r-cran-cachem.
110s Preparing to unpack .../131-r-cran-cachem_1.1.0-1_amd64.deb ...
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110s Selecting previously unselected package r-cran-htmltools.
110s Preparing to unpack .../132-r-cran-htmltools_0.5.8.1-1_amd64.deb ...
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110s Selecting previously unselected package r-cran-jquerylib.
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110s Selecting previously unselected package r-cran-jsonlite.
110s Preparing to unpack .../134-r-cran-jsonlite_1.9.1+dfsg-1_amd64.deb ...
110s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ...
110s Selecting previously unselected package r-cran-memoise.
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110s Selecting previously unselected package r-cran-mime.
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110s Selecting previously unselected package r-cran-fs.
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110s Selecting previously unselected package r-cran-rappdirs.
110s Preparing to unpack .../138-r-cran-rappdirs_0.3.3-1_amd64.deb ...
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110s Selecting previously unselected package r-cran-processx.
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110s Selecting previously unselected package r-cran-callr.
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110s Selecting previously unselected package r-cran-cardata.
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110s Selecting previously unselected package r-cran-mgcv.
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110s Selecting previously unselected package r-cran-gtable.
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110s Selecting previously unselected package r-cran-farver.
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110s Selecting previously unselected package r-cran-labeling.
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110s Unpacking r-cran-labeling (0.4.3-1) ...
111s Selecting previously unselected package r-cran-colorspace.
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111s Selecting previously unselected package r-cran-munsell.
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111s Selecting previously unselected package r-cran-rcolorbrewer.
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111s Selecting previously unselected package r-cran-viridislite.
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111s Selecting previously unselected package r-cran-ggplot2.
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111s Selecting previously unselected package r-cran-cowplot.
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111s Selecting previously unselected package r-cran-deriv.
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111s Selecting previously unselected package r-cran-modelr.
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111s Selecting previously unselected package r-cran-doby.
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112s Selecting previously unselected package r-cran-knitr.
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112s Unpacking r-cran-knitr (1.50+dfsg-1) ...
112s Selecting previously unselected package r-cran-pbkrtest.
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112s Selecting previously unselected package r-cran-sparsem.
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112s Selecting previously unselected package r-cran-matrixmodels.
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112s Selecting previously unselected package r-cran-survival.
112s Preparing to unpack .../172-r-cran-survival_3.8-3-1_amd64.deb ...
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112s Selecting previously unselected package r-cran-matrixstats.
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112s Selecting previously unselected package r-cran-rcpparmadillo.
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112s Unpacking r-cran-rcpparmadillo (14.4.0-1-1) ...
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112s Selecting previously unselected package r-cran-proxy.
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112s Selecting previously unselected package r-cran-e1071.
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112s Selecting previously unselected package r-cran-iterators.
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112s Selecting previously unselected package r-cran-foreach.
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112s Selecting previously unselected package r-cran-data.table.
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112s Selecting previously unselected package r-cran-modelmetrics.
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112s Unpacking r-cran-modelmetrics (1.2.2.2-1build1) ...
112s Selecting previously unselected package r-cran-plyr.
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112s Selecting previously unselected package r-cran-proc.
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112s Selecting previously unselected package r-cran-tzdb.
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112s Selecting previously unselected package r-cran-clock.
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112s Selecting previously unselected package r-cran-gower.
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112s Selecting previously unselected package r-cran-sparsevctrs.
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112s Selecting previously unselected package r-cran-hardhat.
112s Preparing to unpack .../188-r-cran-hardhat_1.4.1+dfsg-1_all.deb ...
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113s Selecting previously unselected package r-cran-rpart.
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113s Selecting previously unselected package r-cran-shape.
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113s Selecting previously unselected package r-cran-diagram.
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113s Selecting previously unselected package r-cran-kernsmooth.
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113s Selecting previously unselected package r-cran-future.apply.
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113s Selecting previously unselected package r-cran-progressr.
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113s Selecting previously unselected package r-cran-squarem.
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113s Selecting previously unselected package r-cran-lava.
113s Preparing to unpack .../196-r-cran-lava_1.8.1+dfsg-1_all.deb ...
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113s Selecting previously unselected package r-cran-prodlim.
113s Preparing to unpack .../197-r-cran-prodlim_2024.06.25-1_amd64.deb ...
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113s Selecting previously unselected package r-cran-ipred.
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113s Selecting previously unselected package r-cran-timechange.
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113s Selecting previously unselected package r-cran-lubridate.
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113s Selecting previously unselected package r-cran-caret.
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113s Selecting previously unselected package r-cran-clipr.
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113s Selecting previously unselected package r-cran-crayon.
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113s Selecting previously unselected package r-cran-prettyunits.
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113s Selecting previously unselected package r-cran-progress.
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113s Selecting previously unselected package r-cran-vroom.
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113s Selecting previously unselected package r-cran-readr.
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113s Selecting previously unselected package r-cran-haven.
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113s Selecting previously unselected package r-cran-curl.
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113s Selecting previously unselected package r-cran-rematch.
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113s Selecting previously unselected package r-cran-cellranger.
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114s Selecting previously unselected package r-cran-r.oo.
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114s Selecting previously unselected package r-cran-rio.
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114s Selecting previously unselected package r-cran-car.
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116s Setting up libjs-json (0~20221030+~1.0.8-1) ...
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116s Setting up libpaper-utils (2.2.5-0.3) ...
116s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ...
116s Setting up libthai0:amd64 (0.1.29-2build1) ...
116s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ...
116s Setting up pandoc (3.1.11.1+ds-2) ...
116s Setting up libtiff6:amd64 (4.7.0-3ubuntu1) ...
116s Setting up libfontconfig1:amd64 (2.15.0-2.2ubuntu1) ...
116s Setting up libsm6:amd64 (2:1.2.4-1) ...
116s Setting up fontconfig (2.15.0-2.2ubuntu1) ...
118s Regenerating fonts cache... done.
118s Setting up libxft2:amd64 (2.3.6-1build1) ...
118s Setting up libtk8.6:amd64 (8.6.16-1) ...
118s Setting up libpango-1.0-0:amd64 (1.56.3-1) ...
118s Setting up libcairo2:amd64 (1.18.4-1) ...
118s Setting up libxt6t64:amd64 (1:1.2.1-1.2build1) ...
118s Setting up libpangoft2-1.0-0:amd64 (1.56.3-1) ...
118s Setting up libpangocairo-1.0-0:amd64 (1.56.3-1) ...
118s Setting up r-base-core (4.4.3-1) ...
119s Creating config file /etc/R/Renviron with new version
119s Setting up r-cran-crayon (1.5.3-1) ...
119s Setting up r-cran-squarem (2021.1-1) ...
119s Setting up r-cran-labeling (0.4.3-1) ...
119s Setting up r-cran-sourcetools (0.1.7-1-1) ...
119s Setting up r-cran-lattice (0.22-6-1) ...
119s Setting up r-cran-ps (1.9.0-1) ...
119s Setting up r-cran-nlme (3.1.168-1) ...
119s Setting up r-cran-farver (2.1.2-1) ...
119s Setting up r-cran-formula (1.2-5-1) ...
119s Setting up r-cran-zip (2.3.2-1) ...
119s Setting up r-cran-viridislite (0.4.2-2) ...
119s Setting up r-cran-sparsem (1.84-2-1) ...
119s Setting up r-cran-statmod (1.5.0-1) ...
119s Setting up r-cran-nnet (7.3-20-1) ...
119s Setting up r-cran-insight (1.1.0+dfsg-1) ...
119s Setting up r-cran-clipr (0.8.0-1) ...
119s Setting up r-cran-commonmark (1.9.5-1) ...
119s Setting up r-cran-proxy (0.4-27-1) ...
119s Setting up r-cran-r6 (2.6.1-1) ...
119s Setting up r-cran-pkgkitten (0.2.4-1) ...
119s Setting up r-cran-numderiv (2016.8-1.1-3) ...
119s Setting up r-cran-coda (0.19-4.1-1) ...
119s Setting up r-cran-magrittr (2.0.3-1) ...
119s Setting up r-cran-rappdirs (0.3.3-1) ...
119s Setting up r-cran-microbenchmark (1.5.0-1) ...
119s Setting up r-cran-littler (0.3.20-2) ...
119s Setting up r-cran-fs (1.6.5+dfsg-1) ...
119s Setting up r-cran-rcpp (1.0.14-1) ...
119s Setting up r-cran-curl (6.2.1+dfsg-1ubuntu1) ...
119s Setting up r-cran-codetools (0.2-20-1) ...
119s Setting up r-cran-brio (1.1.5-1) ...
119s Setting up r-cran-estimability (1.5.1-1) ...
119s Setting up r-cran-nloptr (2.2.1-1) ...
119s Setting up r-cran-boot (1.3-31-1) ...
119s Setting up r-cran-diffobj (0.3.5-1) ...
119s Setting up r-cran-rematch (2.0.0-1) ...
119s Setting up r-cran-rlang (1.1.5-1) ...
119s Setting up r-cran-matrixstats (1.5.0-1) ...
119s Setting up r-cran-listenv (0.9.1+dfsg-1) ...
119s Setting up littler (0.3.20-2) ...
119s Setting up r-cran-xfun (0.51+dfsg-1) ...
119s Setting up r-cran-withr (3.0.2+dfsg-1) ...
119s Setting up r-cran-backports (1.5.0-2) ...
119s Setting up r-cran-deriv (4.1.6-1) ...
119s Setting up r-cran-processx (3.8.6-1) ...
119s Setting up r-cran-mime (0.12-2) ...
119s Setting up r-cran-praise (1.0.0-4build1) ...
119s Setting up r-cran-generics (0.1.3-1) ...
119s Setting up r-cran-base64enc (0.1-3-3) ...
119s Setting up r-cran-iterators (1.0.14-1) ...
119s Setting up r-cran-abind (1.4-8-1) ...
119s Setting up r-cran-digest (0.6.37-1) ...
119s Setting up r-cran-yaml (2.3.10-1) ...
119s Setting up r-cran-gower (1.0.2-1) ...
119s Setting up r-cran-evaluate (1.0.3-1) ...
119s Setting up r-cran-dbi (1.2.3-1) ...
119s Setting up r-cran-timedate (4041.110-1) ...
119s Setting up r-cran-highr (0.11+dfsg-1) ...
119s Setting up r-cran-foreach (1.5.2-1) ...
119s Setting up r-cran-prettyunits (1.2.0-1) ...
119s Setting up r-cran-fansi (1.0.6-1ubuntu1) ...
119s Setting up r-cran-cardata (3.0.5-1) ...
119s Setting up r-cran-mass (7.3-65-1) ...
119s Setting up r-cran-bdsmatrix (1.3-7-1) ...
119s Setting up r-cran-data.table (1.17.0+dfsg-1) ...
119s Setting up r-cran-glue (1.8.0-1) ...
119s Setting up r-cran-foreign (0.8.90-1) ...
119s Setting up r-cran-writexl (1.5.2-1) ...
119s Setting up r-cran-bit (4.6.0+dfsg-1) ...
119s Setting up r-cran-xtable (1:1.8-4-2) ...
119s Setting up r-cran-cli (3.6.4-1) ...
119s Setting up r-cran-rbibutils (2.3-1) ...
119s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
119s Setting up r-cran-rprojroot (2.0.4-2) ...
119s Setting up r-cran-bit64 (4.6.0-1-1ubuntu2) ...
119s Setting up r-cran-progressr (0.15.1-1) ...
119s Setting up r-cran-shape (1.4.6.1-1) ...
119s Setting up r-cran-fastmap (1.2.0-1) ...
119s Setting up r-cran-png (0.1-8-1build2) ...
119s Setting up r-cran-r.methodss3 (1.8.2-1) ...
119s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ...
119s Setting up r-cran-pkgconfig (2.0.3-2build1) ...
119s Setting up r-cran-utf8 (1.2.4-1) ...
119s Setting up r-cran-colorspace (2.1-1+dfsg-1) ...
119s Setting up r-cran-parallelly (1.42.0-1) ...
119s Setting up r-cran-stringi (1.8.4-1build1) ...
119s Setting up r-cran-cpp11 (0.5.2-1) ...
119s Setting up r-cran-mvtnorm (1.3-3-1) ...
119s Setting up r-cran-plyr (1.8.9-1) ...
119s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ...
119s Setting up r-cran-isoband (0.2.7-1) ...
119s Setting up r-cran-diagram (1.6.5-2) ...
119s Setting up r-cran-waldo (0.6.1-2) ...
119s Setting up r-cran-gtable (0.3.6+dfsg-1) ...
119s Setting up r-cran-pscl (1.5.9-1) ...
119s Setting up r-cran-zoo (1.8-13-1) ...
119s Setting up r-cran-later (1.4.1+dfsg-1) ...
119s Setting up r-cran-matrix (1.7-3-1) ...
119s Setting up r-cran-htmltools (0.5.8.1-1) ...
119s Setting up r-cran-tinytex (0.56-1) ...
119s Setting up r-cran-kernsmooth (2.23-26-1) ...
119s Setting up r-cran-knitr (1.50+dfsg-1) ...
119s Setting up r-cran-mgcv (1.9-1-1) ...
119s Setting up r-cran-cachem (1.1.0-1) ...
119s Setting up r-cran-sass (0.4.9+dfsg-1) ...
119s Setting up r-cran-bbmle (1.0.25.1-1) ...
119s Setting up r-cran-rcpparmadillo (14.4.0-1-1) ...
119s Setting up r-cran-tzdb (0.5.0-1) ...
119s Setting up r-cran-globals (0.16.3-1) ...
119s Setting up r-cran-vctrs (0.6.5-1) ...
119s Setting up r-cran-rcppeigen (0.3.4.0.2-1) ...
119s Setting up r-cran-mitools (2.4-2build1) ...
119s Setting up r-cran-pillar (1.10.1+dfsg-1) ...
119s Setting up r-cran-ellipsis (0.3.2-2) ...
119s Setting up r-cran-minqa (1.2.8-1) ...
119s Setting up r-cran-stringr (1.5.1-1) ...
119s Setting up r-cran-class (7.3-23-1) ...
119s Setting up r-cran-modelmetrics (1.2.2.2-1build1) ...
119s Setting up r-cran-callr (3.7.6-1) ...
119s Setting up r-cran-openxlsx (4.2.8-1) ...
119s Setting up r-cran-matrixmodels (0.5-3-1) ...
119s Setting up r-cran-desc (1.4.3-1) ...
119s Setting up r-cran-sparsevctrs (0.2.0-2) ...
119s Setting up r-cran-munsell (0.5.1-1) ...
119s Setting up r-cran-tibble (3.2.1+dfsg-3) ...
119s Setting up r-cran-clock (0.7.2-1) ...
119s Setting up r-cran-sandwich (3.1-1-1) ...
119s Setting up r-cran-proc (1.18.5-1) ...
119s Setting up r-cran-fontawesome (0.5.3-1) ...
119s Setting up r-cran-survival (3.8-3-1) ...
119s Setting up r-cran-survey (4.4-2-2) ...
119s Setting up r-cran-r.oo (1.27.0-1) ...
119s Setting up r-cran-rdpack (2.6.3-1) ...
119s Setting up r-cran-future (1.34.0+dfsg-1) ...
119s Setting up r-cran-forcats (1.0.0-1) ...
119s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ...
119s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ...
119s Setting up r-cran-reshape2 (1.4.4-2build1) ...
119s Setting up r-cran-emmeans (1.10.7+dfsg-1) ...
119s Setting up r-cran-future.apply (1.11.3+dfsg-1) ...
119s Setting up r-cran-tmb (1.9.17-1) ...
119s Setting up r-cran-timechange (0.3.0-1) ...
119s Setting up r-cran-th.data (1.1-3-1) ...
119s Setting up r-cran-hms (1.1.3-1) ...
119s Setting up r-cran-scales (1.3.0-1) ...
119s Setting up r-cran-memoise (2.0.1-1) ...
119s Setting up r-cran-lava (1.8.1+dfsg-1) ...
119s Setting up r-cran-promises (1.3.2+dfsg-1) ...
119s Setting up r-cran-purrr (1.0.4-1) ...
119s Setting up r-cran-e1071 (1.7-16-1) ...
119s Setting up r-cran-multcomp (1.4-28-1) ...
119s Setting up r-cran-pkgbuild (1.4.6-1) ...
119s Setting up r-cran-hardhat (1.4.1+dfsg-1) ...
119s Setting up r-cran-dplyr (1.1.4-4) ...
119s Setting up r-cran-reformulas (0.4.1-1) ...
119s Setting up r-cran-progress (1.2.3-1) ...
119s Setting up r-cran-lubridate (1.9.4+dfsg-1) ...
119s Setting up r-cran-pkgload (1.4.0-1) ...
119s Setting up r-cran-r.utils (2.13.0-1) ...
119s Setting up r-cran-vroom (1.6.5-1) ...
119s Setting up r-cran-prodlim (2024.06.25-1) ...
119s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ...
119s Setting up r-cran-cellranger (1.1.0-3) ...
119s Setting up r-cran-httpuv (1.6.15+dfsg-1) ...
119s Setting up r-cran-rpart (4.1.24-1) ...
119s Setting up r-cran-ipred (0.9-15-1) ...
119s Setting up r-cran-lme4 (1.1-36-1) ...
119s Setting up r-cran-furrr (0.3.1-1) ...
119s Setting up r-cran-mlmrev (1.0-8-2build1) ...
119s Setting up r-cran-testthat (3.2.3-1) ...
119s Setting up r-cran-bslib (0.9.0+dfsg-1syncable1) ...
119s Setting up r-cran-readr (2.1.5-1) ...
119s Setting up r-cran-tidyr (1.3.1-1) ...
119s Setting up r-cran-recipes (1.1.0+dfsg-1) ...
119s Setting up r-cran-cowplot (1.1.3+dfsg-1) ...
119s Setting up r-cran-readxl (1.4.5-1) ...
119s Setting up r-cran-blme (1.0-6-1) ...
119s Setting up r-cran-haven (2.5.4-1) ...
119s Setting up r-cran-effects (4.2.2-1) ...
119s Setting up r-cran-caret (7.0-1+dfsg-1) ...
119s Setting up r-cran-shiny (1.10.0+dfsg-2) ...
119s Setting up r-cran-glmmtmb (1.1.10+dfsg-1build2) ...
119s Setting up r-cran-broom (1.0.7+dfsg-1) ...
119s Setting up r-cran-rmarkdown (2.29+dfsg-1) ...
119s Setting up r-cran-conquer (1.3.3-1) ...
119s Setting up r-cran-rio (1.2.3-1) ...
119s Setting up r-cran-broom.mixed (0.2.9.6-3) ...
119s Setting up r-cran-quantreg (6.1-1) ...
119s Setting up r-cran-modelr (0.1.11-1) ...
119s Setting up r-cran-doby (4.6.26-1) ...
119s Setting up r-cran-pbkrtest (0.5.3-1) ...
119s Setting up r-cran-car (3.1-3-1) ...
119s Processing triggers for libc-bin (2.41-6ubuntu1) ...
119s Processing triggers for man-db (2.13.0-1) ...
120s Processing triggers for install-info (7.1.1-1) ...
121s autopkgtest [18:54:01]: test run-unit-test: [-----------------------
121s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation)
121s BEGIN TEST AAAtest-all.R
121s 
121s R version 4.4.3 (2025-02-28) -- "Trophy Case"
121s Copyright (C) 2025 The R Foundation for Statistical Computing
121s Platform: x86_64-pc-linux-gnu
121s 
121s R is free software and comes with ABSOLUTELY NO WARRANTY.
121s You are welcome to redistribute it under certain conditions.
121s Type 'license()' or 'licence()' for distribution details.
121s 
121s R is a collaborative project with many contributors.
121s Type 'contributors()' for more information and
121s 'citation()' on how to cite R or R packages in publications.
121s 
121s Type 'demo()' for some demos, 'help()' for on-line help, or
121s 'help.start()' for an HTML browser interface to help.
121s Type 'q()' to quit R.
121s 
121s > if (require("testthat")) {
121s +     pkg <- "glmmTMB"
121s +     require(pkg, character.only=TRUE)
121s +     print(sessionInfo())
121s +     test_check(pkg, reporter="summary")
121s +     print(warnings()) # TODO? catch most of these by expect_warning(..)
121s + } else {
121s +     warnings("Package 'testthat' not available, cannot run unit tests for package",
121s + 	     sQuote(pkg))
121s + }
121s Loading required package: testthat
122s Loading required package: glmmTMB
123s R version 4.4.3 (2025-02-28)
123s Platform: x86_64-pc-linux-gnu
123s Running under: Ubuntu Questing Quokka (development branch)
123s 
123s Matrix products: default
123s BLAS:   /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.12.1 
123s LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.12.1;  LAPACK version 3.12.0
123s 
123s locale:
123s [1] C
123s 
123s time zone: Etc/UTC
123s tzcode source: system (glibc)
123s 
123s attached base packages:
123s [1] stats     graphics  grDevices utils     datasets  methods   base     
123s 
123s other attached packages:
123s [1] glmmTMB_1.1.10 testthat_3.2.3
123s 
123s loaded via a namespace (and not attached):
123s  [1] nlme_3.1-168        cli_3.6.4           TH.data_1.1-3      
123s  [4] rlang_1.1.5         estimability_1.5.1  reformulas_0.4.1   
123s  [7] xtable_1.8-4        minqa_1.2.8         zoo_1.8-13         
123s [10] TMB_1.9.17          lme4_1.1-36         brio_1.1.5         
123s [13] grid_4.4.3          MASS_7.3-65         mvtnorm_1.3-3      
123s [16] numDeriv_2016.8-1.1 multcomp_1.4-28     compiler_4.4.3     
123s [19] codetools_0.2-20    sandwich_3.1-1      emmeans_1.10.7     
123s [22] coda_0.19-4.1       Rcpp_1.0.14         mgcv_1.9-1         
123s [25] lattice_0.22-6      nloptr_2.2.1        R6_2.6.1           
123s [28] Rdpack_2.6.3        splines_4.4.3       rbibutils_2.3      
123s [31] magrittr_2.0.3      Matrix_1.7-3        tools_4.4.3        
123s [34] boot_1.3-31         survival_3.8-3     
124s Anova: ...............
128s VarCorr: ...............
128s altopt: 
128s alternative optimizers: S
130s basics: .............SS.....S......S
131s trickier examples: SS.SSSS........
131s bootMer: 
131s bootMer: SS
138s checkRank: ................................................
139s control: SS.
139s diagnose: .S
140s disp: ...
142s downstream: S.....
142s edgecases: 
142s test edge cases: .
142s env: 
144s basic examples: ...
151s families: .....................SSSSSSSSS..................................
151s formulas: 
151s formula parsing: ................
152s mapequal: ........
152s mapopt: 
162s methods: ...............................S..........................................S..............S.......................
162s misc: .
162s offset: SSSSSSSSS
163s predict: .....SSS
169s Predict two-column response case: SS.................S..SSS....S..S...S.............S.......
171s priors: ...........S
171s propto: W
172s reml: ........
175s rr: .........
175s saveload: 
176s Saving and loading glmmTMB objects: .
176s simulate: .........
177s simulate_new: ....S.........
179s smooths: ......
179s sparseX: 
180s sparse X models: .......
180s start: ..
180s utils: .........................................................................................................
180s varstruc: 
181s variance structures: ........SSS.
182s weight: .........
182s zi: 
182s ZI models: SS
182s 
182s == Skipped =====================================================================
183s 1. downstream methods work with optim() ('test-altopt.R:11:3') - Reason: On CRAN
183s 
183s 2. Update Gaussian ('test-basics.R:85:3') - Reason: On CRAN
183s 
183s 3. Variance structures ('test-basics.R:94:3') - Reason: On CRAN
183s 
183s 4. Multiple RE, reordering ('test-basics.R:124:6') - Reason: On CRAN
183s 
183s 5. close to lme4 results ('test-basics.R:164:5') - Reason: On CRAN
183s 
183s 6. basic zero inflation ('test-basics.R:217:8') - Reason: On CRAN
183s 
183s 7. alternative binomial model specifications ('test-basics.R:236:5') - Reason: On CRAN
183s 
183s 8. NA handling ('test-basics.R:257:5') - Reason: On CRAN
183s 
183s 9. quine NB fit ('test-basics.R:275:5') - Reason: On CRAN
183s 
183s 10. contrasts arg ('test-basics.R:286:5') - Reason: On CRAN
183s 
183s 11. zero disp setting ('test-basics.R:297:5') - Reason: On CRAN
183s 
183s 12. Bernoulli responses ('test-bootMer.R:12:3') - Reason: On CRAN
183s 
183s 13. binomial responses ('test-bootMer.R:22:5') - Reason: On CRAN
183s 
183s 14. profile method ('test-control.R:16:3') - Reason: On CRAN
183s 
183s 15. parallel regions ('test-control.R:50:3') - Reason: On CRAN
183s 
183s 16. diagnose works with Tweedie fits ('test-diagnose.R:16:5') - Reason: On CRAN
183s 
183s 17. emmeans ('test-downstream.R:22:5') - Reason: On CRAN
183s 
183s 18. beta ('test-families.R:103:3') - Reason: On CRAN
183s 
183s 19. nbinom ('test-families.R:125:5') - Reason: On CRAN
183s 
183s 20. dbetabinom ('test-families.R:186:5') - Reason: On CRAN
183s 
183s 21. truncated ('test-families.R:259:5') - Reason: On CRAN
183s 
183s 22. truncated_genpois ('test-families.R:336:3') - Reason: On CRAN
183s 
183s 23. truncated_compois ('test-families.R:352:5') - Reason: On CRAN
183s 
183s 24. compois ('test-families.R:362:5') - Reason: On CRAN
183s 
183s 25. genpois ('test-families.R:372:5') - Reason: On CRAN
183s 
183s 26. tweedie ('test-families.R:380:5') - Reason: On CRAN
183s 
183s 27. anova ML/REML checks ('test-methods.R:135:5') - Reason: On CRAN
183s 
183s 28. simulate with re.form = NA ('test-methods.R:410:1') - Reason: empty test
183s 
183s 29. various binomial response types work ('test-methods.R:490:3') - Reason: On CRAN
183s 
183s 30. LM with offset as argument ('test-offset.R:27:3') - Reason: On CRAN
183s 
183s 31. LM with offset in formula ('test-offset.R:35:5') - Reason: On CRAN
183s 
183s 32. LM with offset in formula - variable not in environment ('test-offset.R:48:5') - Reason: On CRAN
183s 
183s 33. LM with offset in dispersion formula ('test-offset.R:57:5') - Reason: On CRAN
183s 
183s 34. LM with multiple offsets (cond/dispersion) ('test-offset.R:65:5') - Reason: On CRAN
183s 
183s 35. LM with random crap in the formula ('test-offset.R:74:5') - Reason: On CRAN
183s 
183s 36. offset in do.call ('test-offset.R:81:5') - Reason: On CRAN
183s 
183s 37. LONG offset in do.call ('test-offset.R:90:5') - Reason: On CRAN
183s 
183s 38. offset works with attributes ('test-offset.R:101:3') - Reason: On CRAN
183s 
183s 39. new levels of fixed effect factor ('test-predict.R:37:5') - Reason: On CRAN
183s 
183s 40. new levels in RE term ('test-predict.R:44:5') - Reason: On CRAN
183s 
183s 41. new levels in AR1 (OK) ('test-predict.R:51:5') - Reason: On CRAN
183s 
183s 42. two-column response ('test-predict.R:61:5') - Reason: On CRAN
183s 
183s 43. Prediction with dispformula=~0 ('test-predict.R:69:5') - Reason: On CRAN
183s 
183s 44. scale ('test-predict.R:183:5') - Reason: On CRAN
183s 
183s 45. scale_RE ('test-predict.R:205:5') - Reason: On CRAN
183s 
183s 46. complex bases in dispformula ('test-predict.R:212:5') - Reason: On CRAN
183s 
183s 47. fix_predvars works for I(x^2) ('test-predict.R:225:5') - Reason: On CRAN
183s 
183s 48. contrasts carried over ('test-predict.R:293:5') - Reason: On CRAN
183s 
183s 49. offset-only model (GH #625) ('test-predict.R:332:5') - Reason: On CRAN
183s 
183s 50. inverse-link prediction ('test-predict.R:351:3') - Reason: On CRAN
183s 
183s 51. nzprob doesn't segfault ('test-predict.R:442:5') - Reason: On CRAN
183s 
183s 52. prior specs ('test-priors.R:125:5') - Reason: On CRAN
183s 
183s 53. simulate_new, returning pars ('test-simulate_new.R:49:1') - Reason: empty test
183s 
183s 54. ar1 requires factor time ('test-varstruc.R:58:3') - Reason: On CRAN
183s 
183s 55. varcorr_print ('test-varstruc.R:78:5') - Reason: On CRAN
183s 
183s 56. cov_struct_order ('test-varstruc.R:109:5') - Reason: On CRAN
183s 
183s 57. zi ('test-zi.R:12:3') - Reason: On CRAN
183s 
183s 58. zi beta and Gamma ('test-zi.R:37:5') - Reason: On CRAN
183s 
183s == Warnings ====================================================================
183s 1. (code run outside of `test_that()`) ('test-propto.R:9:1') - there is no package called 'ade4'
183s 
183s == DONE ========================================================================
183s > 
183s autopkgtest [18:55:03]: test run-unit-test: -----------------------]
184s autopkgtest [18:55:04]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
184s run-unit-test        PASS
184s autopkgtest [18:55:04]: test r-cran-tmb_compatibility: preparing testbed
256s autopkgtest [18:56:16]: testbed dpkg architecture: amd64
256s autopkgtest [18:56:16]: testbed apt version: 3.0.0
256s autopkgtest [18:56:16]: @@@@@@@@@@@@@@@@@@@@ test bed setup
256s autopkgtest [18:56:16]: testbed release detected to be: questing
257s autopkgtest [18:56:17]: updating testbed package index (apt update)
257s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB]
258s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease
258s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease
258s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease
258s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [1442 kB]
258s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [33.7 kB]
258s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [149 kB]
258s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 Packages [203 kB]
258s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/main i386 Packages [146 kB]
258s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/universe i386 Packages [576 kB]
258s Get:11 http://ftpmaster.internal/ubuntu questing-proposed/universe amd64 Packages [1424 kB]
258s Get:12 http://ftpmaster.internal/ubuntu questing-proposed/multiverse amd64 Packages [48.6 kB]
258s Get:13 http://ftpmaster.internal/ubuntu questing-proposed/multiverse i386 Packages [23.1 kB]
258s Fetched 4155 kB in 1s (3783 kB/s)
259s Reading package lists...
260s autopkgtest [18:56:20]: upgrading testbed (apt dist-upgrade and autopurge)
260s Reading package lists...
260s Building dependency tree...
260s Reading state information...
261s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
261s Starting 2 pkgProblemResolver with broken count: 0
261s Done
261s Entering ResolveByKeep
262s 
262s Calculating upgrade...
262s The following packages will be upgraded:
262s   cloud-init cloud-init-base debianutils libmbim-glib4 libmbim-proxy
262s   libnftnl11 libqmi-glib5 libqmi-proxy libsepol2 python3-lazr.restfulclient
262s   sos
262s 11 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
262s Need to get 2693 kB of archives.
262s After this operation, 104 kB disk space will be freed.
262s Get:1 http://ftpmaster.internal/ubuntu questing/main amd64 debianutils amd64 5.22 [93.0 kB]
262s Get:2 http://ftpmaster.internal/ubuntu questing/main amd64 libsepol2 amd64 3.8.1-1 [327 kB]
262s Get:3 http://ftpmaster.internal/ubuntu questing/main amd64 libnftnl11 amd64 1.2.9-1 [69.1 kB]
262s Get:4 http://ftpmaster.internal/ubuntu questing/main amd64 cloud-init-base all 25.2~1g7a0265d3-0ubuntu1 [619 kB]
262s Get:5 http://ftpmaster.internal/ubuntu questing/main amd64 libmbim-proxy amd64 1.32.0-1 [6276 B]
262s Get:6 http://ftpmaster.internal/ubuntu questing/main amd64 libmbim-glib4 amd64 1.32.0-1 [233 kB]
262s Get:7 http://ftpmaster.internal/ubuntu questing/main amd64 libqmi-proxy amd64 1.36.0-1 [6220 B]
262s Get:8 http://ftpmaster.internal/ubuntu questing/main amd64 libqmi-glib5 amd64 1.36.0-1 [920 kB]
262s Get:9 http://ftpmaster.internal/ubuntu questing/main amd64 python3-lazr.restfulclient all 0.14.6-3 [51.0 kB]
262s Get:10 http://ftpmaster.internal/ubuntu questing/main amd64 sos all 4.9.1-1 [367 kB]
262s Get:11 http://ftpmaster.internal/ubuntu questing/main amd64 cloud-init all 25.2~1g7a0265d3-0ubuntu1 [2106 B]
263s Preconfiguring packages ...
263s Fetched 2693 kB in 1s (4293 kB/s)
263s (Reading database ... 
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(Reading database ... 45%
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(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 80514 files and directories currently installed.)
263s Preparing to unpack .../debianutils_5.22_amd64.deb ...
263s Unpacking debianutils (5.22) over (5.21) ...
263s Setting up debianutils (5.22) ...
263s (Reading database ... 
(Reading database ... 5%
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(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 80514 files and directories currently installed.)
263s Preparing to unpack .../libsepol2_3.8.1-1_amd64.deb ...
263s Unpacking libsepol2:amd64 (3.8.1-1) over (3.7-1) ...
263s Setting up libsepol2:amd64 (3.8.1-1) ...
263s (Reading database ... 
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(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 80514 files and directories currently installed.)
263s Preparing to unpack .../0-libnftnl11_1.2.9-1_amd64.deb ...
263s Unpacking libnftnl11:amd64 (1.2.9-1) over (1.2.8-1) ...
263s Preparing to unpack .../1-cloud-init-base_25.2~1g7a0265d3-0ubuntu1_all.deb ...
264s Unpacking cloud-init-base (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ...
264s Preparing to unpack .../2-libmbim-proxy_1.32.0-1_amd64.deb ...
264s Unpacking libmbim-proxy (1.32.0-1) over (1.31.2-0ubuntu4) ...
264s Preparing to unpack .../3-libmbim-glib4_1.32.0-1_amd64.deb ...
264s Unpacking libmbim-glib4:amd64 (1.32.0-1) over (1.31.2-0ubuntu4) ...
264s Preparing to unpack .../4-libqmi-proxy_1.36.0-1_amd64.deb ...
264s Unpacking libqmi-proxy (1.36.0-1) over (1.35.6-1) ...
264s Preparing to unpack .../5-libqmi-glib5_1.36.0-1_amd64.deb ...
264s Unpacking libqmi-glib5:amd64 (1.36.0-1) over (1.35.6-1) ...
264s Preparing to unpack .../6-python3-lazr.restfulclient_0.14.6-3_all.deb ...
264s Unpacking python3-lazr.restfulclient (0.14.6-3) over (0.14.6-2) ...
264s Preparing to unpack .../7-sos_4.9.1-1_all.deb ...
264s Unpacking sos (4.9.1-1) over (4.9.0-6) ...
265s Preparing to unpack .../8-cloud-init_25.2~1g7a0265d3-0ubuntu1_all.deb ...
265s Unpacking cloud-init (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ...
265s Setting up sos (4.9.1-1) ...
265s Setting up libnftnl11:amd64 (1.2.9-1) ...
265s Setting up cloud-init-base (25.2~1g7a0265d3-0ubuntu1) ...
267s Setting up python3-lazr.restfulclient (0.14.6-3) ...
267s Setting up libmbim-glib4:amd64 (1.32.0-1) ...
267s Setting up cloud-init (25.2~1g7a0265d3-0ubuntu1) ...
267s Setting up libmbim-proxy (1.32.0-1) ...
267s Setting up libqmi-glib5:amd64 (1.36.0-1) ...
267s Setting up libqmi-proxy (1.36.0-1) ...
267s Processing triggers for libc-bin (2.41-6ubuntu1) ...
267s Processing triggers for rsyslog (8.2412.0-2ubuntu2) ...
267s Processing triggers for man-db (2.13.0-1) ...
269s Reading package lists...
269s Building dependency tree...
269s Reading state information...
269s Starting pkgProblemResolver with broken count: 0
269s Starting 2 pkgProblemResolver with broken count: 0
269s Done
270s Solving dependencies...
270s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
270s autopkgtest [18:56:30]: rebooting testbed after setup commands that affected boot
296s Reading package lists...
296s Building dependency tree...
296s Reading state information...
296s Starting pkgProblemResolver with broken count: 0
296s Starting 2 pkgProblemResolver with broken count: 0
296s Done
297s The following NEW packages will be installed:
297s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3
297s   libcairo2 libdatrie1 libdeflate0 libfontconfig1 libgfortran5 libgomp1
297s   libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8
297s   liblapack3 liblerc4 libnlopt0 libpango-1.0-0 libpangocairo-1.0-0
297s   libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6
297s   libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0
297s   libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 littler r-base-core
297s   r-cran-boot r-cran-glmmtmb r-cran-lattice r-cran-littler r-cran-lme4
297s   r-cran-mass r-cran-matrix r-cran-mgcv r-cran-minqa r-cran-nlme r-cran-nloptr
297s   r-cran-numderiv r-cran-pkgkitten r-cran-rbibutils r-cran-rcpp
297s   r-cran-rcppeigen r-cran-rdpack r-cran-reformulas r-cran-statmod r-cran-tmb
297s   unzip x11-common xdg-utils zip
297s 0 upgraded, 66 newly installed, 0 to remove and 0 not upgraded.
297s Need to get 72.0 MB of archives.
297s After this operation, 153 MB of additional disk space will be used.
297s Get:1 http://ftpmaster.internal/ubuntu questing/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB]
297s Get:2 http://ftpmaster.internal/ubuntu questing/main amd64 fonts-dejavu-core all 2.37-8 [835 kB]
297s Get:3 http://ftpmaster.internal/ubuntu questing/main amd64 fontconfig-config amd64 2.15.0-2.2ubuntu1 [37.8 kB]
297s Get:4 http://ftpmaster.internal/ubuntu questing/main amd64 libfontconfig1 amd64 2.15.0-2.2ubuntu1 [164 kB]
297s Get:5 http://ftpmaster.internal/ubuntu questing/main amd64 fontconfig amd64 2.15.0-2.2ubuntu1 [180 kB]
297s Get:6 http://ftpmaster.internal/ubuntu questing/main amd64 libblas3 amd64 3.12.1-2 [359 kB]
297s Get:7 http://ftpmaster.internal/ubuntu questing/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB]
297s Get:8 http://ftpmaster.internal/ubuntu questing/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB]
297s Get:9 http://ftpmaster.internal/ubuntu questing/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B]
297s Get:10 http://ftpmaster.internal/ubuntu questing/main amd64 libxrender1 amd64 1:0.9.10-1.1build1 [19.0 kB]
297s Get:11 http://ftpmaster.internal/ubuntu questing/main amd64 libcairo2 amd64 1.18.4-1 [662 kB]
297s Get:12 http://ftpmaster.internal/ubuntu questing/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB]
297s Get:13 http://ftpmaster.internal/ubuntu questing/main amd64 libdeflate0 amd64 1.23-2 [49.9 kB]
297s Get:14 http://ftpmaster.internal/ubuntu questing/main amd64 libgfortran5 amd64 15-20250404-0ubuntu1 [926 kB]
297s Get:15 http://ftpmaster.internal/ubuntu questing/main amd64 libgomp1 amd64 15-20250404-0ubuntu1 [151 kB]
297s Get:16 http://ftpmaster.internal/ubuntu questing/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB]
297s Get:17 http://ftpmaster.internal/ubuntu questing/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB]
297s Get:18 http://ftpmaster.internal/ubuntu questing/main amd64 x11-common all 1:7.7+23ubuntu4 [21.8 kB]
297s Get:19 http://ftpmaster.internal/ubuntu questing/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB]
297s Get:20 http://ftpmaster.internal/ubuntu questing/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB]
298s Get:21 http://ftpmaster.internal/ubuntu questing/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B]
298s Get:22 http://ftpmaster.internal/ubuntu questing/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB]
298s Get:23 http://ftpmaster.internal/ubuntu questing/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB]
298s Get:24 http://ftpmaster.internal/ubuntu questing/main amd64 libthai-data all 0.1.29-2build1 [158 kB]
298s Get:25 http://ftpmaster.internal/ubuntu questing/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB]
298s Get:26 http://ftpmaster.internal/ubuntu questing/main amd64 libpango-1.0-0 amd64 1.56.3-1 [256 kB]
298s Get:27 http://ftpmaster.internal/ubuntu questing/main amd64 libpangoft2-1.0-0 amd64 1.56.3-1 [52.9 kB]
298s Get:28 http://ftpmaster.internal/ubuntu questing/main amd64 libpangocairo-1.0-0 amd64 1.56.3-1 [29.1 kB]
298s Get:29 http://ftpmaster.internal/ubuntu questing/main amd64 libpaper2 amd64 2.2.5-0.3 [17.4 kB]
298s Get:30 http://ftpmaster.internal/ubuntu questing/main amd64 libpaper-utils amd64 2.2.5-0.3 [15.5 kB]
298s Get:31 http://ftpmaster.internal/ubuntu questing/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB]
298s Get:32 http://ftpmaster.internal/ubuntu questing/main amd64 libsm6 amd64 2:1.2.4-1 [17.4 kB]
298s Get:33 http://ftpmaster.internal/ubuntu questing/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1086 kB]
298s Get:34 http://ftpmaster.internal/ubuntu questing/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB]
298s Get:35 http://ftpmaster.internal/ubuntu questing/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB]
298s Get:36 http://ftpmaster.internal/ubuntu questing/main amd64 libtiff6 amd64 4.7.0-3ubuntu1 [204 kB]
298s Get:37 http://ftpmaster.internal/ubuntu questing/main amd64 libxft2 amd64 2.3.6-1build1 [45.3 kB]
298s Get:38 http://ftpmaster.internal/ubuntu questing/main amd64 libxss1 amd64 1:1.2.3-1build3 [7204 B]
298s Get:39 http://ftpmaster.internal/ubuntu questing/main amd64 libtk8.6 amd64 8.6.16-1 [868 kB]
298s Get:40 http://ftpmaster.internal/ubuntu questing/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB]
298s Get:41 http://ftpmaster.internal/ubuntu questing/main amd64 zip amd64 3.0-14ubuntu2 [185 kB]
298s Get:42 http://ftpmaster.internal/ubuntu questing/main amd64 unzip amd64 6.0-28ubuntu6 [181 kB]
298s Get:43 http://ftpmaster.internal/ubuntu questing/main amd64 xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
298s Get:44 http://ftpmaster.internal/ubuntu questing/universe amd64 r-base-core amd64 4.4.3-1 [28.9 MB]
299s Get:45 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-littler amd64 0.3.20-2 [96.6 kB]
299s Get:46 http://ftpmaster.internal/ubuntu questing/universe amd64 littler all 0.3.20-2 [2554 B]
299s Get:47 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-boot all 1.3-31-1 [635 kB]
299s Get:48 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-lattice amd64 0.22-6-1 [1340 kB]
299s Get:49 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-matrix amd64 1.7-3-1 [4349 kB]
299s Get:50 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
299s Get:51 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-rcpp amd64 1.0.14-1 [1998 kB]
299s Get:52 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1428 kB]
299s Get:53 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-tmb amd64 1.9.17-1 [1205 kB]
299s Get:54 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-mass amd64 7.3-65-1 [1116 kB]
299s Get:55 http://ftpmaster.internal/ubuntu questing-proposed/universe amd64 r-cran-nlme amd64 3.1.168-1 [2320 kB]
299s Get:56 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-minqa amd64 1.2.8-1 [119 kB]
299s Get:57 http://ftpmaster.internal/ubuntu questing/universe amd64 libnlopt0 amd64 2.7.1-6ubuntu3 [251 kB]
299s Get:58 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-nloptr amd64 2.2.1-1 [251 kB]
299s Get:59 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-rbibutils amd64 2.3-1 [1023 kB]
299s Get:60 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-rdpack all 2.6.3-1 [636 kB]
299s Get:61 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-reformulas all 0.4.1-1 [128 kB]
299s Get:62 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-statmod amd64 1.5.0-1 [295 kB]
299s Get:63 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-lme4 amd64 1.1-36-1 [4135 kB]
299s Get:64 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-numderiv all 2016.8-1.1-3 [115 kB]
299s Get:65 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-mgcv amd64 1.9-1-1 [3252 kB]
299s Get:66 http://ftpmaster.internal/ubuntu questing/universe amd64 r-cran-glmmtmb amd64 1.1.10+dfsg-1build2 [5892 kB]
300s Preconfiguring packages ...
300s Fetched 72.0 MB in 3s (24.5 MB/s)
300s Selecting previously unselected package fonts-dejavu-mono.
300s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 80518 files and directories currently installed.)
300s Preparing to unpack .../00-fonts-dejavu-mono_2.37-8_all.deb ...
300s Unpacking fonts-dejavu-mono (2.37-8) ...
300s Selecting previously unselected package fonts-dejavu-core.
300s Preparing to unpack .../01-fonts-dejavu-core_2.37-8_all.deb ...
300s Unpacking fonts-dejavu-core (2.37-8) ...
300s Selecting previously unselected package fontconfig-config.
300s Preparing to unpack .../02-fontconfig-config_2.15.0-2.2ubuntu1_amd64.deb ...
301s Unpacking fontconfig-config (2.15.0-2.2ubuntu1) ...
301s Selecting previously unselected package libfontconfig1:amd64.
301s Preparing to unpack .../03-libfontconfig1_2.15.0-2.2ubuntu1_amd64.deb ...
301s Unpacking libfontconfig1:amd64 (2.15.0-2.2ubuntu1) ...
301s Selecting previously unselected package fontconfig.
301s Preparing to unpack .../04-fontconfig_2.15.0-2.2ubuntu1_amd64.deb ...
301s Unpacking fontconfig (2.15.0-2.2ubuntu1) ...
301s Selecting previously unselected package libblas3:amd64.
301s Preparing to unpack .../05-libblas3_3.12.1-2_amd64.deb ...
301s Unpacking libblas3:amd64 (3.12.1-2) ...
301s Selecting previously unselected package libpixman-1-0:amd64.
301s Preparing to unpack .../06-libpixman-1-0_0.44.0-3_amd64.deb ...
301s Unpacking libpixman-1-0:amd64 (0.44.0-3) ...
301s Selecting previously unselected package libxcb-render0:amd64.
301s Preparing to unpack .../07-libxcb-render0_1.17.0-2_amd64.deb ...
301s Unpacking libxcb-render0:amd64 (1.17.0-2) ...
301s Selecting previously unselected package libxcb-shm0:amd64.
301s Preparing to unpack .../08-libxcb-shm0_1.17.0-2_amd64.deb ...
301s Unpacking libxcb-shm0:amd64 (1.17.0-2) ...
301s Selecting previously unselected package libxrender1:amd64.
301s Preparing to unpack .../09-libxrender1_1%3a0.9.10-1.1build1_amd64.deb ...
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304s Setting up libgraphite2-3:amd64 (1.3.14-2ubuntu1) ...
304s Setting up libpixman-1-0:amd64 (0.44.0-3) ...
304s Setting up libsharpyuv0:amd64 (1.5.0-0.1) ...
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304s Setting up libxrender1:amd64 (1:0.9.10-1.1build1) ...
304s Setting up libdatrie1:amd64 (0.2.13-3build1) ...
304s Setting up libxcb-render0:amd64 (1.17.0-2) ...
304s Setting up unzip (6.0-28ubuntu6) ...
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304s Setting up libnlopt0:amd64 (2.7.1-6ubuntu3) ...
304s Setting up libxcb-shm0:amd64 (1.17.0-2) ...
304s Setting up libgomp1:amd64 (15-20250404-0ubuntu1) ...
304s Setting up libjbig0:amd64 (2.1-6.1ubuntu2) ...
304s Setting up zip (3.0-14ubuntu2) ...
304s Setting up libblas3:amd64 (3.12.1-2) ...
304s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
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304s Setting up libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ...
304s Setting up libgfortran5:amd64 (15-20250404-0ubuntu1) ...
304s Setting up libwebp7:amd64 (1.5.0-0.1) ...
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304s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
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304s Setting up libice6:amd64 (2:1.1.1-1) ...
304s Setting up liblapack3:amd64 (3.12.1-2) ...
304s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
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306s Regenerating fonts cache... done.
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306s Setting up libpango-1.0-0:amd64 (1.56.3-1) ...
306s Setting up libcairo2:amd64 (1.18.4-1) ...
306s Setting up libxt6t64:amd64 (1:1.2.1-1.2build1) ...
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306s Setting up libpangocairo-1.0-0:amd64 (1.56.3-1) ...
306s Setting up r-base-core (4.4.3-1) ...
307s Creating config file /etc/R/Renviron with new version
307s Setting up r-cran-lattice (0.22-6-1) ...
307s Setting up r-cran-nlme (3.1.168-1) ...
307s Setting up r-cran-statmod (1.5.0-1) ...
307s Setting up r-cran-pkgkitten (0.2.4-1) ...
307s Setting up r-cran-numderiv (2016.8-1.1-3) ...
307s Setting up r-cran-littler (0.3.20-2) ...
307s Setting up r-cran-rcpp (1.0.14-1) ...
307s Setting up r-cran-nloptr (2.2.1-1) ...
307s Setting up r-cran-boot (1.3-31-1) ...
307s Setting up littler (0.3.20-2) ...
307s Setting up r-cran-mass (7.3-65-1) ...
307s Setting up r-cran-rbibutils (2.3-1) ...
307s Setting up r-cran-matrix (1.7-3-1) ...
307s Setting up r-cran-mgcv (1.9-1-1) ...
307s Setting up r-cran-rcppeigen (0.3.4.0.2-1) ...
307s Setting up r-cran-minqa (1.2.8-1) ...
307s Setting up r-cran-rdpack (2.6.3-1) ...
307s Setting up r-cran-tmb (1.9.17-1) ...
307s Setting up r-cran-reformulas (0.4.1-1) ...
307s Setting up r-cran-lme4 (1.1-36-1) ...
307s Setting up r-cran-glmmtmb (1.1.10+dfsg-1build2) ...
307s Processing triggers for install-info (7.1.1-1) ...
307s Processing triggers for libc-bin (2.41-6ubuntu1) ...
307s Processing triggers for man-db (2.13.0-1) ...
310s autopkgtest [18:57:10]: test r-cran-tmb_compatibility: R -e 'options("warn" = 2); library(glmmTMB)'
310s autopkgtest [18:57:10]: test r-cran-tmb_compatibility: [-----------------------
311s 
311s R version 4.4.3 (2025-02-28) -- "Trophy Case"
311s Copyright (C) 2025 The R Foundation for Statistical Computing
311s Platform: x86_64-pc-linux-gnu
311s 
311s R is free software and comes with ABSOLUTELY NO WARRANTY.
311s You are welcome to redistribute it under certain conditions.
311s Type 'license()' or 'licence()' for distribution details.
311s 
311s R is a collaborative project with many contributors.
311s Type 'contributors()' for more information and
311s 'citation()' on how to cite R or R packages in publications.
311s 
311s Type 'demo()' for some demos, 'help()' for on-line help, or
311s 'help.start()' for an HTML browser interface to help.
311s Type 'q()' to quit R.
311s 
311s > options("warn" = 2); library(glmmTMB)
312s > 
312s > 
312s autopkgtest [18:57:12]: test r-cran-tmb_compatibility: -----------------------]
313s autopkgtest [18:57:13]: test r-cran-tmb_compatibility:  - - - - - - - - - - results - - - - - - - - - -
313s r-cran-tmb_compatibility PASS (superficial)
313s autopkgtest [18:57:13]: @@@@@@@@@@@@@@@@@@@@ summary
313s run-unit-test        PASS
313s r-cran-tmb_compatibility PASS (superficial)
329s nova [W] Skipping flock for amd64
329s Creating nova instance adt-questing-amd64-r-cran-glmmtmb-20250503-185159-juju-7f2275-prod-proposed-migration-environment-23-600a1063-38f3-4fb0-995a-ffd2eac822f1 from image adt/ubuntu-questing-amd64-server-20250503.img (UUID 57b7c1b6-ad80-4bdb-b031-36f045f7f3b3)...
329s nova [W] Timed out waiting for c1bc5596-4754-438e-8cfb-5b27e58ddd7a to get deleted.
329s nova [W] Skipping flock for amd64
329s Creating nova instance adt-questing-amd64-r-cran-glmmtmb-20250503-185159-juju-7f2275-prod-proposed-migration-environment-23-600a1063-38f3-4fb0-995a-ffd2eac822f1 from image adt/ubuntu-questing-amd64-server-20250503.img (UUID 57b7c1b6-ad80-4bdb-b031-36f045f7f3b3)...
329s nova [W] Timed out waiting for 1b96edf6-5129-4988-9cae-5714d585dcea to get deleted.