0s autopkgtest [19:03:16]: starting date and time: 2025-05-03 19:03:16+0000 0s autopkgtest [19:03:16]: git checkout: 9986aa8c Merge branch 'skia/fix_network_interface' into 'ubuntu/production' 0s autopkgtest [19:03:16]: host juju-7f2275-prod-proposed-migration-environment-21; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.hr9qhbjo/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:python3.13 --apt-upgrade nwchem --timeout-short=300 --timeout-copy=20000 --timeout-test=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=python3.13/3.13.3-2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu4-ram8-disk100 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-21@bos03-2.secgroup --name adt-questing-amd64-nwchem-20250503-173532-juju-7f2275-prod-proposed-migration-environment-21-d895b04e-861c-4c00-a719-aec5da213e2d --image adt/ubuntu-questing-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-21 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 47s autopkgtest [19:04:03]: testbed dpkg architecture: amd64 47s autopkgtest [19:04:03]: testbed apt version: 3.0.0 47s autopkgtest [19:04:03]: @@@@@@@@@@@@@@@@@@@@ test bed setup 47s autopkgtest [19:04:03]: testbed release detected to be: None 48s autopkgtest [19:04:04]: updating testbed package index (apt update) 48s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB] 49s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 49s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 49s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 49s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [1442 kB] 49s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [149 kB] 49s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [33.7 kB] 49s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main i386 Packages [146 kB] 49s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 Packages [203 kB] 49s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/universe i386 Packages [576 kB] 49s Get:11 http://ftpmaster.internal/ubuntu questing-proposed/universe amd64 Packages [1424 kB] 49s Get:12 http://ftpmaster.internal/ubuntu questing-proposed/multiverse i386 Packages [23.1 kB] 49s Get:13 http://ftpmaster.internal/ubuntu questing-proposed/multiverse amd64 Packages [48.6 kB] 49s Fetched 4155 kB in 1s (3681 kB/s) 50s Reading package lists... 51s autopkgtest [19:04:07]: upgrading testbed (apt dist-upgrade and autopurge) 51s Reading package lists... 51s Building dependency tree... 51s Reading state information... 52s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 52s Starting 2 pkgProblemResolver with broken count: 0 52s Done 52s Entering ResolveByKeep 53s 53s Calculating upgrade... 53s The following packages will be upgraded: 53s cloud-init cloud-init-base debianutils libmbim-glib4 libmbim-proxy 53s libnftnl11 libpython3.13 libpython3.13-minimal libpython3.13-stdlib 53s libqmi-glib5 libqmi-proxy libsepol2 python3-lazr.restfulclient python3.13 53s python3.13-gdbm python3.13-minimal sos 53s 17 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 53s Need to get 11.1 MB of archives. 53s After this operation, 96.3 kB disk space will be freed. 53s Get:1 http://ftpmaster.internal/ubuntu questing/main amd64 debianutils amd64 5.22 [93.0 kB] 53s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 python3.13 amd64 3.13.3-2 [739 kB] 53s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 libpython3.13 amd64 3.13.3-2 [2342 kB] 54s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 libpython3.13-stdlib amd64 3.13.3-2 [2071 kB] 54s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 python3.13-minimal amd64 3.13.3-2 [2372 kB] 54s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 libpython3.13-minimal amd64 3.13.3-2 [884 kB] 54s Get:7 http://ftpmaster.internal/ubuntu questing/main amd64 libsepol2 amd64 3.8.1-1 [327 kB] 54s Get:8 http://ftpmaster.internal/ubuntu questing/main amd64 libnftnl11 amd64 1.2.9-1 [69.1 kB] 54s Get:9 http://ftpmaster.internal/ubuntu questing/main amd64 cloud-init-base all 25.2~1g7a0265d3-0ubuntu1 [619 kB] 54s Get:10 http://ftpmaster.internal/ubuntu questing/main amd64 libmbim-proxy amd64 1.32.0-1 [6276 B] 54s Get:11 http://ftpmaster.internal/ubuntu questing/main amd64 libmbim-glib4 amd64 1.32.0-1 [233 kB] 54s Get:12 http://ftpmaster.internal/ubuntu questing/main amd64 libqmi-proxy amd64 1.36.0-1 [6220 B] 54s Get:13 http://ftpmaster.internal/ubuntu questing/main amd64 libqmi-glib5 amd64 1.36.0-1 [920 kB] 54s Get:14 http://ftpmaster.internal/ubuntu questing/main amd64 python3-lazr.restfulclient all 0.14.6-3 [51.0 kB] 54s Get:15 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 python3.13-gdbm amd64 3.13.3-2 [32.1 kB] 54s Get:16 http://ftpmaster.internal/ubuntu questing/main amd64 sos all 4.9.1-1 [367 kB] 54s Get:17 http://ftpmaster.internal/ubuntu questing/main amd64 cloud-init all 25.2~1g7a0265d3-0ubuntu1 [2106 B] 54s Preconfiguring packages ... 55s Fetched 11.1 MB in 1s (8986 kB/s) 55s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80514 files and directories currently installed.) 55s Preparing to unpack .../debianutils_5.22_amd64.deb ... 55s Unpacking debianutils (5.22) over (5.21) ... 55s Setting up debianutils (5.22) ... 55s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80514 files and directories currently installed.) 55s Preparing to unpack .../0-python3.13_3.13.3-2_amd64.deb ... 55s Unpacking python3.13 (3.13.3-2) over (3.13.3-1) ... 55s Preparing to unpack .../1-libpython3.13_3.13.3-2_amd64.deb ... 55s Unpacking libpython3.13:amd64 (3.13.3-2) over (3.13.3-1) ... 55s Preparing to unpack .../2-libpython3.13-stdlib_3.13.3-2_amd64.deb ... 55s Unpacking libpython3.13-stdlib:amd64 (3.13.3-2) over (3.13.3-1) ... 55s Preparing to unpack .../3-python3.13-minimal_3.13.3-2_amd64.deb ... 55s Unpacking python3.13-minimal (3.13.3-2) over (3.13.3-1) ... 55s Preparing to unpack .../4-libpython3.13-minimal_3.13.3-2_amd64.deb ... 56s Unpacking libpython3.13-minimal:amd64 (3.13.3-2) over (3.13.3-1) ... 56s Preparing to unpack .../5-libsepol2_3.8.1-1_amd64.deb ... 56s Unpacking libsepol2:amd64 (3.8.1-1) over (3.7-1) ... 56s Setting up libsepol2:amd64 (3.8.1-1) ... 56s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80514 files and directories currently installed.) 56s Preparing to unpack .../0-libnftnl11_1.2.9-1_amd64.deb ... 56s Unpacking libnftnl11:amd64 (1.2.9-1) over (1.2.8-1) ... 56s Preparing to unpack .../1-cloud-init-base_25.2~1g7a0265d3-0ubuntu1_all.deb ... 56s Unpacking cloud-init-base (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ... 56s Preparing to unpack .../2-libmbim-proxy_1.32.0-1_amd64.deb ... 56s Unpacking libmbim-proxy (1.32.0-1) over (1.31.2-0ubuntu4) ... 56s Preparing to unpack .../3-libmbim-glib4_1.32.0-1_amd64.deb ... 56s Unpacking libmbim-glib4:amd64 (1.32.0-1) over (1.31.2-0ubuntu4) ... 56s Preparing to unpack .../4-libqmi-proxy_1.36.0-1_amd64.deb ... 56s Unpacking libqmi-proxy (1.36.0-1) over (1.35.6-1) ... 56s Preparing to unpack .../5-libqmi-glib5_1.36.0-1_amd64.deb ... 56s Unpacking libqmi-glib5:amd64 (1.36.0-1) over (1.35.6-1) ... 57s Preparing to unpack .../6-python3-lazr.restfulclient_0.14.6-3_all.deb ... 57s Unpacking python3-lazr.restfulclient (0.14.6-3) over (0.14.6-2) ... 57s Preparing to unpack .../7-python3.13-gdbm_3.13.3-2_amd64.deb ... 57s Unpacking python3.13-gdbm (3.13.3-2) over (3.13.3-1) ... 57s Preparing to unpack .../8-sos_4.9.1-1_all.deb ... 57s Unpacking sos (4.9.1-1) over (4.9.0-6) ... 57s Preparing to unpack .../9-cloud-init_25.2~1g7a0265d3-0ubuntu1_all.deb ... 57s Unpacking cloud-init (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ... 57s Setting up sos (4.9.1-1) ... 58s Setting up libnftnl11:amd64 (1.2.9-1) ... 58s Setting up cloud-init-base (25.2~1g7a0265d3-0ubuntu1) ... 59s Setting up libpython3.13-minimal:amd64 (3.13.3-2) ... 59s Setting up python3.13-minimal (3.13.3-2) ... 60s Setting up python3-lazr.restfulclient (0.14.6-3) ... 60s Setting up libpython3.13-stdlib:amd64 (3.13.3-2) ... 60s Setting up libmbim-glib4:amd64 (1.32.0-1) ... 60s Setting up python3.13-gdbm (3.13.3-2) ... 60s Setting up libpython3.13:amd64 (3.13.3-2) ... 60s Setting up cloud-init (25.2~1g7a0265d3-0ubuntu1) ... 60s Setting up python3.13 (3.13.3-2) ... 61s Setting up libmbim-proxy (1.32.0-1) ... 61s Setting up libqmi-glib5:amd64 (1.36.0-1) ... 61s Setting up libqmi-proxy (1.36.0-1) ... 61s Processing triggers for man-db (2.13.0-1) ... 62s Processing triggers for libc-bin (2.41-6ubuntu1) ... 62s Processing triggers for rsyslog (8.2412.0-2ubuntu2) ... 63s Processing triggers for systemd (257.4-1ubuntu3) ... 63s Reading package lists... 63s Building dependency tree... 63s Reading state information... 64s Starting pkgProblemResolver with broken count: 0 64s Starting 2 pkgProblemResolver with broken count: 0 64s Done 64s Solving dependencies... 64s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 64s autopkgtest [19:04:20]: rebooting testbed after setup commands that affected boot 87s autopkgtest [19:04:43]: testbed running kernel: Linux 6.14.0-15-generic #15-Ubuntu SMP PREEMPT_DYNAMIC Sun Apr 6 15:05:05 UTC 2025 90s autopkgtest [19:04:46]: @@@@@@@@@@@@@@@@@@@@ apt-source nwchem 98s Get:1 http://ftpmaster.internal/ubuntu questing/universe nwchem 7.2.3-7build1 (dsc) [2834 B] 98s Get:2 http://ftpmaster.internal/ubuntu questing/universe nwchem 7.2.3-7build1 (tar) [168 MB] 98s Get:3 http://ftpmaster.internal/ubuntu questing/universe nwchem 7.2.3-7build1 (diff) [560 kB] 98s gpgv: Signature made Fri Jan 3 11:06:21 2025 UTC 98s gpgv: using RSA key 568BF22A66337CBFC9A6B9B72C83DBC8E9BD0E37 98s gpgv: Can't check signature: No public key 98s dpkg-source: warning: cannot verify inline signature for ./nwchem_7.2.3-7build1.dsc: no acceptable signature found 144s autopkgtest [19:05:40]: testing package nwchem version 7.2.3-7build1 145s autopkgtest [19:05:41]: build not needed 191s autopkgtest [19:06:27]: test testsuite.sh: preparing testbed 191s Reading package lists... 192s Building dependency tree... 192s Reading state information... 192s Starting pkgProblemResolver with broken count: 0 192s Starting 2 pkgProblemResolver with broken count: 0 192s Done 192s The following NEW packages will be installed: 192s libamd-comgr2 libamdhip64-5 libblas3 libevent-pthreads-2.1-7t64 libfabric1 192s libgfortran5 libgomp1 libhsa-runtime64-1 libhsakmt1 libhwloc-plugins 192s libhwloc15 libibmad5 libibumad3 liblapack3 libllvm17t64 libmunge2 192s libopenmpi40 libpciaccess0 libpmix2t64 libpsm-infinipath1 libpsm2-2 192s librdmacm1t64 libscalapack-openmpi2.2 libucx0 libxnvctrl0 mpi-default-bin 192s nwchem nwchem-data nwchem-openmpi ocl-icd-libopencl1 openmpi-bin 192s openmpi-common 193s 0 upgraded, 32 newly installed, 0 to remove and 0 not upgraded. 193s Need to get 84.6 MB of archives. 193s After this operation, 378 MB of additional disk space will be used. 193s Get:1 http://ftpmaster.internal/ubuntu questing/universe amd64 libllvm17t64 amd64 1:17.0.6-21 [26.0 MB] 194s Get:2 http://ftpmaster.internal/ubuntu questing/universe amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3build2 [14.4 MB] 194s Get:3 http://ftpmaster.internal/ubuntu questing/universe amd64 libhsakmt1 amd64 5.7.0-1build1 [62.9 kB] 194s Get:4 http://ftpmaster.internal/ubuntu questing/universe amd64 libhsa-runtime64-1 amd64 5.7.1-2build1 [491 kB] 194s Get:5 http://ftpmaster.internal/ubuntu questing/universe amd64 libamdhip64-5 amd64 5.7.1-5.1 [9695 kB] 194s Get:6 http://ftpmaster.internal/ubuntu questing/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 194s Get:7 http://ftpmaster.internal/ubuntu questing/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10 [7966 B] 194s Get:8 http://ftpmaster.internal/ubuntu questing/universe amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.4 [179 kB] 194s Get:9 http://ftpmaster.internal/ubuntu questing/universe amd64 libpsm2-2 amd64 11.2.185-2.1 [193 kB] 194s Get:10 http://ftpmaster.internal/ubuntu questing/main amd64 librdmacm1t64 amd64 56.0-4ubuntu1 [71.5 kB] 194s Get:11 http://ftpmaster.internal/ubuntu questing/universe amd64 libfabric1 amd64 1.17.0-3.1 [789 kB] 194s Get:12 http://ftpmaster.internal/ubuntu questing/main amd64 libgfortran5 amd64 15-20250404-0ubuntu1 [926 kB] 194s Get:13 http://ftpmaster.internal/ubuntu questing/main amd64 libgomp1 amd64 15-20250404-0ubuntu1 [151 kB] 194s Get:14 http://ftpmaster.internal/ubuntu questing/universe amd64 libhwloc15 amd64 2.12.0-1 [194 kB] 194s Get:15 http://ftpmaster.internal/ubuntu questing/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 194s Get:16 http://ftpmaster.internal/ubuntu questing/universe amd64 libmunge2 amd64 0.5.16-1 [16.5 kB] 194s Get:17 http://ftpmaster.internal/ubuntu questing/main amd64 libpciaccess0 amd64 0.17-3build1 [18.6 kB] 194s Get:18 http://ftpmaster.internal/ubuntu questing/main amd64 libxnvctrl0 amd64 510.47.03-0ubuntu4 [12.6 kB] 194s Get:19 http://ftpmaster.internal/ubuntu questing/universe amd64 ocl-icd-libopencl1 amd64 2.3.2-1build1 [38.5 kB] 194s Get:20 http://ftpmaster.internal/ubuntu questing/universe amd64 libhwloc-plugins amd64 2.12.0-1 [16.0 kB] 194s Get:21 http://ftpmaster.internal/ubuntu questing/universe amd64 libpmix2t64 amd64 5.0.6-5 [714 kB] 194s Get:22 http://ftpmaster.internal/ubuntu questing/main amd64 libibumad3 amd64 56.0-4ubuntu1 [31.2 kB] 194s Get:23 http://ftpmaster.internal/ubuntu questing/main amd64 libibmad5 amd64 56.0-4ubuntu1 [43.9 kB] 194s Get:24 http://ftpmaster.internal/ubuntu questing/universe amd64 libucx0 amd64 1.18.1+ds-2 [1293 kB] 195s Get:25 http://ftpmaster.internal/ubuntu questing/universe amd64 libopenmpi40 amd64 5.0.7-1 [2526 kB] 195s Get:26 http://ftpmaster.internal/ubuntu questing/universe amd64 openmpi-common all 5.0.7-1 [97.9 kB] 195s Get:27 http://ftpmaster.internal/ubuntu questing/universe amd64 openmpi-bin amd64 5.0.7-1 [192 kB] 195s Get:28 http://ftpmaster.internal/ubuntu questing/universe amd64 mpi-default-bin amd64 1.18 [2510 B] 195s Get:29 http://ftpmaster.internal/ubuntu questing/universe amd64 libscalapack-openmpi2.2 amd64 2.2.2-1ubuntu1 [2073 kB] 195s Get:30 http://ftpmaster.internal/ubuntu questing/universe amd64 nwchem-data all 7.2.3-7build1 [6076 kB] 195s Get:31 http://ftpmaster.internal/ubuntu questing/universe amd64 nwchem-openmpi amd64 7.2.3-7build1 [14.8 MB] 195s Get:32 http://ftpmaster.internal/ubuntu questing/universe amd64 nwchem all 7.2.3-7build1 [17.9 kB] 195s Fetched 84.6 MB in 3s (31.0 MB/s) 196s Selecting previously unselected package libllvm17t64:amd64. 196s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80518 files and directories currently installed.) 196s Preparing to unpack .../00-libllvm17t64_1%3a17.0.6-21_amd64.deb ... 196s Unpacking libllvm17t64:amd64 (1:17.0.6-21) ... 196s Selecting previously unselected package libamd-comgr2:amd64. 196s Preparing to unpack .../01-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3build2_amd64.deb ... 196s Unpacking libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3build2) ... 197s Selecting previously unselected package libhsakmt1:amd64. 197s Preparing to unpack .../02-libhsakmt1_5.7.0-1build1_amd64.deb ... 197s Unpacking libhsakmt1:amd64 (5.7.0-1build1) ... 197s Selecting previously unselected package libhsa-runtime64-1. 197s Preparing to unpack .../03-libhsa-runtime64-1_5.7.1-2build1_amd64.deb ... 197s Unpacking libhsa-runtime64-1 (5.7.1-2build1) ... 197s Selecting previously unselected package libamdhip64-5. 197s Preparing to unpack .../04-libamdhip64-5_5.7.1-5.1_amd64.deb ... 197s Unpacking libamdhip64-5 (5.7.1-5.1) ... 197s Selecting previously unselected package libblas3:amd64. 197s Preparing to unpack .../05-libblas3_3.12.1-2_amd64.deb ... 197s Unpacking libblas3:amd64 (3.12.1-2) ... 197s Selecting previously unselected package libevent-pthreads-2.1-7t64:amd64. 197s Preparing to unpack .../06-libevent-pthreads-2.1-7t64_2.1.12-stable-10_amd64.deb ... 197s Unpacking libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10) ... 197s Selecting previously unselected package libpsm-infinipath1. 197s Preparing to unpack .../07-libpsm-infinipath1_3.3+20.604758e7-6.4_amd64.deb ... 197s Unpacking libpsm-infinipath1 (3.3+20.604758e7-6.4) ... 197s Selecting previously unselected package libpsm2-2. 197s Preparing to unpack .../08-libpsm2-2_11.2.185-2.1_amd64.deb ... 197s Unpacking libpsm2-2 (11.2.185-2.1) ... 197s Selecting previously unselected package librdmacm1t64:amd64. 197s Preparing to unpack .../09-librdmacm1t64_56.0-4ubuntu1_amd64.deb ... 197s Unpacking librdmacm1t64:amd64 (56.0-4ubuntu1) ... 197s Selecting previously unselected package libfabric1:amd64. 197s Preparing to unpack .../10-libfabric1_1.17.0-3.1_amd64.deb ... 197s Unpacking libfabric1:amd64 (1.17.0-3.1) ... 197s Selecting previously unselected package libgfortran5:amd64. 197s Preparing to unpack .../11-libgfortran5_15-20250404-0ubuntu1_amd64.deb ... 197s Unpacking libgfortran5:amd64 (15-20250404-0ubuntu1) ... 197s Selecting previously unselected package libgomp1:amd64. 197s Preparing to unpack .../12-libgomp1_15-20250404-0ubuntu1_amd64.deb ... 197s Unpacking libgomp1:amd64 (15-20250404-0ubuntu1) ... 197s Selecting previously unselected package libhwloc15:amd64. 197s Preparing to unpack .../13-libhwloc15_2.12.0-1_amd64.deb ... 197s Unpacking libhwloc15:amd64 (2.12.0-1) ... 197s Selecting previously unselected package liblapack3:amd64. 197s Preparing to unpack .../14-liblapack3_3.12.1-2_amd64.deb ... 197s Unpacking liblapack3:amd64 (3.12.1-2) ... 197s Selecting previously unselected package libmunge2:amd64. 197s Preparing to unpack .../15-libmunge2_0.5.16-1_amd64.deb ... 197s Unpacking libmunge2:amd64 (0.5.16-1) ... 197s Selecting previously unselected package libpciaccess0:amd64. 197s Preparing to unpack .../16-libpciaccess0_0.17-3build1_amd64.deb ... 197s Unpacking libpciaccess0:amd64 (0.17-3build1) ... 197s Selecting previously unselected package libxnvctrl0:amd64. 197s Preparing to unpack .../17-libxnvctrl0_510.47.03-0ubuntu4_amd64.deb ... 197s Unpacking libxnvctrl0:amd64 (510.47.03-0ubuntu4) ... 197s Selecting previously unselected package ocl-icd-libopencl1:amd64. 197s Preparing to unpack .../18-ocl-icd-libopencl1_2.3.2-1build1_amd64.deb ... 197s Unpacking ocl-icd-libopencl1:amd64 (2.3.2-1build1) ... 197s Selecting previously unselected package libhwloc-plugins:amd64. 197s Preparing to unpack .../19-libhwloc-plugins_2.12.0-1_amd64.deb ... 197s Unpacking libhwloc-plugins:amd64 (2.12.0-1) ... 197s Selecting previously unselected package libpmix2t64:amd64. 197s Preparing to unpack .../20-libpmix2t64_5.0.6-5_amd64.deb ... 197s Unpacking libpmix2t64:amd64 (5.0.6-5) ... 197s Selecting previously unselected package libibumad3:amd64. 197s Preparing to unpack .../21-libibumad3_56.0-4ubuntu1_amd64.deb ... 197s Unpacking libibumad3:amd64 (56.0-4ubuntu1) ... 197s Selecting previously unselected package libibmad5:amd64. 197s Preparing to unpack .../22-libibmad5_56.0-4ubuntu1_amd64.deb ... 197s Unpacking libibmad5:amd64 (56.0-4ubuntu1) ... 198s Selecting previously unselected package libucx0:amd64. 198s Preparing to unpack .../23-libucx0_1.18.1+ds-2_amd64.deb ... 198s Unpacking libucx0:amd64 (1.18.1+ds-2) ... 198s Selecting previously unselected package libopenmpi40:amd64. 198s Preparing to unpack .../24-libopenmpi40_5.0.7-1_amd64.deb ... 198s Unpacking libopenmpi40:amd64 (5.0.7-1) ... 198s Selecting previously unselected package openmpi-common. 198s Preparing to unpack .../25-openmpi-common_5.0.7-1_all.deb ... 198s Unpacking openmpi-common (5.0.7-1) ... 198s Selecting previously unselected package openmpi-bin. 198s Preparing to unpack .../26-openmpi-bin_5.0.7-1_amd64.deb ... 198s Unpacking openmpi-bin (5.0.7-1) ... 198s Selecting previously unselected package mpi-default-bin. 198s Preparing to unpack .../27-mpi-default-bin_1.18_amd64.deb ... 198s Unpacking mpi-default-bin (1.18) ... 198s Selecting previously unselected package libscalapack-openmpi2.2:amd64. 198s Preparing to unpack .../28-libscalapack-openmpi2.2_2.2.2-1ubuntu1_amd64.deb ... 198s Unpacking libscalapack-openmpi2.2:amd64 (2.2.2-1ubuntu1) ... 198s Selecting previously unselected package nwchem-data. 198s Preparing to unpack .../29-nwchem-data_7.2.3-7build1_all.deb ... 198s Unpacking nwchem-data (7.2.3-7build1) ... 198s Selecting previously unselected package nwchem-openmpi. 198s Preparing to unpack .../30-nwchem-openmpi_7.2.3-7build1_amd64.deb ... 198s Unpacking nwchem-openmpi (7.2.3-7build1) ... 198s Selecting previously unselected package nwchem. 198s Preparing to unpack .../31-nwchem_7.2.3-7build1_all.deb ... 198s Unpacking nwchem (7.2.3-7build1) ... 198s Setting up libpciaccess0:amd64 (0.17-3build1) ... 199s Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10) ... 199s Setting up nwchem-data (7.2.3-7build1) ... 199s Setting up libibumad3:amd64 (56.0-4ubuntu1) ... 199s Setting up libibmad5:amd64 (56.0-4ubuntu1) ... 199s Setting up libgomp1:amd64 (15-20250404-0ubuntu1) ... 199s Setting up libxnvctrl0:amd64 (510.47.03-0ubuntu4) ... 199s Setting up libblas3:amd64 (3.12.1-2) ... 199s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 199s Setting up libmunge2:amd64 (0.5.16-1) ... 199s Setting up libllvm17t64:amd64 (1:17.0.6-21) ... 199s Setting up libhwloc15:amd64 (2.12.0-1) ... 199s Setting up libgfortran5:amd64 (15-20250404-0ubuntu1) ... 199s Setting up ocl-icd-libopencl1:amd64 (2.3.2-1build1) ... 199s Setting up libpsm2-2 (11.2.185-2.1) ... 199s Setting up openmpi-common (5.0.7-1) ... 199s Setting up librdmacm1t64:amd64 (56.0-4ubuntu1) ... 199s Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3build2) ... 199s Setting up libpsm-infinipath1 (3.3+20.604758e7-6.4) ... 199s update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode 199s Setting up libhsakmt1:amd64 (5.7.0-1build1) ... 199s Setting up libfabric1:amd64 (1.17.0-3.1) ... 199s Setting up liblapack3:amd64 (3.12.1-2) ... 199s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 199s Setting up libhwloc-plugins:amd64 (2.12.0-1) ... 199s Setting up libpmix2t64:amd64 (5.0.6-5) ... 199s Setting up libhsa-runtime64-1 (5.7.1-2build1) ... 199s Setting up libamdhip64-5 (5.7.1-5.1) ... 199s Setting up libucx0:amd64 (1.18.1+ds-2) ... 199s Setting up libopenmpi40:amd64 (5.0.7-1) ... 199s Setting up openmpi-bin (5.0.7-1) ... 199s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 199s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 199s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 199s Setting up mpi-default-bin (1.18) ... 199s Setting up libscalapack-openmpi2.2:amd64 (2.2.2-1ubuntu1) ... 199s Setting up nwchem-openmpi (7.2.3-7build1) ... 199s Setting up nwchem (7.2.3-7build1) ... 199s Processing triggers for man-db (2.13.0-1) ... 199s Processing triggers for libc-bin (2.41-6ubuntu1) ... 200s autopkgtest [19:06:36]: test testsuite.sh: [----------------------- 200s ===== TESTING NWCHEM WITH DEFAULT MPI INSTALLATION ===== 200s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 201s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 201s 201s 201s Running tests/dft_he2+/dft_he2+ 201s 201s cleaning scratch 201s copying input and verified output files 201s running nwchem (/usr/bin/nwchem) with 1 processors 201s 212s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 212s OK 212s 212s Running tests/qmmm_grad0/qmmm_grad0 212s 212s cleaning scratch 212s copying input and verified output files 212s running nwchem (/usr/bin/nwchem) with 1 processors 212s 216s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 216s OK 216s 216s Running tests/auh2o/auh2o 216s 216s cleaning scratch 216s copying input and verified output files 216s running nwchem (/usr/bin/nwchem) with 1 processors 216s 219s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 219s OK 219s 219s Running tests/autosym/autosym 219s 219s cleaning scratch 219s copying input and verified output files 219s running nwchem (/usr/bin/nwchem) with 1 processors 219s 229s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 229s OK 229s 229s Running tests/h2mp2/h2mp2 229s 229s cleaning scratch 229s copying input and verified output files 229s running nwchem (/usr/bin/nwchem) with 1 processors 229s 231s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 231s OK 231s 231s Running tests/h2o/h2o 231s 231s cleaning scratch 231s copying input and verified output files 231s running nwchem (/usr/bin/nwchem) with 1 processors 231s 232s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 232s OK 232s 232s Running tests/hess_h2o/hess_h2o 232s 232s cleaning scratch 232s copying input and verified output files 232s running nwchem (/usr/bin/nwchem) with 1 processors 232s 238s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 238s OK 238s 238s Running tests/prop_h2o/prop_h2o 238s 238s cleaning scratch 238s copying input and verified output files 238s running nwchem (/usr/bin/nwchem) with 1 processors 238s 242s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 242s OK 242s 242s Running tests/geom_zmatrix/geom_zmatrix 242s 242s cleaning scratch 242s copying input and verified output files 242s running nwchem (/usr/bin/nwchem) with 1 processors 242s 245s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 245s OK 245s 245s Running tests/rimp2_ne/rimp2_ne 245s 245s cleaning scratch 245s copying input and verified output files 245s running nwchem (/usr/bin/nwchem) with 1 processors 245s 248s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 248s OK 248s 248s Running tests/small_intchk/small_intchk 248s 248s cleaning scratch 248s copying input and verified output files 248s running nwchem (/usr/bin/nwchem) with 1 processors 248s 257s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 257s OK 257s 257s Running tests/tagcheck/tagcheck 257s 257s cleaning scratch 257s copying input and verified output files 257s running nwchem (/usr/bin/nwchem) with 1 processors 257s 259s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 259s OK 259s 259s Running tests/testtab/testtab 259s 259s cleaning scratch 259s copying input and verified output files 259s running nwchem (/usr/bin/nwchem) with 1 processors 259s 261s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 261s OK 261s 261s Running tests/h2o_dk/h2o_dk 261s 261s cleaning scratch 261s copying input and verified output files 261s running nwchem (/usr/bin/nwchem) with 1 processors 261s 266s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 266s OK 266s 266s Running tests/cosmo_h2o/cosmo_h2o 266s 266s cleaning scratch 266s copying input and verified output files 266s running nwchem (/usr/bin/nwchem) with 1 processors 266s 267s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 267s OK 267s 267s Running tests/ch5n_nbo/ch5n_nbo 267s 267s cleaning scratch 267s copying input and verified output files 267s running nwchem (/usr/bin/nwchem) with 1 processors 267s 269s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 269s OK 269s 269s Running tests/h2s_finite/h2s_finite 269s 269s cleaning scratch 269s copying input and verified output files 269s running nwchem (/usr/bin/nwchem) with 1 processors 269s 273s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 273s OK 273s 273s Running tests/pyqa3/pyqa3 273s 273s cleaning scratch 273s copying input and verified output files 273s running nwchem (/usr/bin/nwchem) with 1 processors 273s 277s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 277s OK 277s 277s Running tests/startag/startag 277s 277s cleaning scratch 277s copying input and verified output files 277s running nwchem (/usr/bin/nwchem) with 1 processors 277s 278s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 278s OK 278s 278s Running tests/esp/esp 278s 278s cleaning scratch 278s copying input and verified output files 278s running nwchem (/usr/bin/nwchem) with 1 processors 278s 281s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 281s ESP charges match 281s 281s 281s Running tests/esp_uhf/esp_uhf 281s 281s cleaning scratch 281s copying input and verified output files 281s running nwchem (/usr/bin/nwchem) with 1 processors 281s 285s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 285s ESP charges match 285s 285s 285s Running tests/dft_bsse/dft_bsse 285s 285s cleaning scratch 285s copying input and verified output files 285s running nwchem (/usr/bin/nwchem) with 1 processors 285s 289s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 289s OK 289s 289s Running tests/dplot_dft/dplot_dft 289s 289s cleaning scratch 289s copying input and verified output files 289s running nwchem (/usr/bin/nwchem) with 1 processors 289s 291s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 291s OK 291s 291s Running tests/dft_meta/dft_meta 291s 291s cleaning scratch 291s copying input and verified output files 291s running nwchem (/usr/bin/nwchem) with 1 processors 291s 335s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 335s OK 335s 335s Running tests/dft_mpwb1khf/dft_mpwb1khf 335s 335s cleaning scratch 335s copying input and verified output files 335s running nwchem (/usr/bin/nwchem) with 1 processors 335s 338s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 338s OK 338s 338s Running tests/prop_uhf_h2o/prop_uhf_h2o 338s 338s cleaning scratch 338s copying input and verified output files 338s running nwchem (/usr/bin/nwchem) with 1 processors 338s 353s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 353s OK 353s 353s Running tests/et_zn_dimer/et_zn_dimer 353s 353s cleaning scratch 353s copying input and verified output files 353s running nwchem (/usr/bin/nwchem) with 1 processors 353s 373s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 373s OK 373s 373s Running tests/vectors_rotate/vectors_rotate 373s 373s cleaning scratch 373s copying input and verified output files 373s running nwchem (/usr/bin/nwchem) with 1 processors 373s 375s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 375s OK 375s 375s Running tests/sad_ch3hf/sad_ch3hf 375s 375s cleaning scratch 375s copying input and verified output files 375s running nwchem (/usr/bin/nwchem) with 1 processors 375s 387s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 387s OK 387s 387s Running tests/band/band 387s 387s cleaning scratch 387s copying input and verified output files 387s running nwchem (/usr/bin/nwchem) with 1 processors 387s 394s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 394s OK 394s 394s Running tests/pspw/pspw 394s 394s cleaning scratch 394s copying input and verified output files 394s running nwchem (/usr/bin/nwchem) with 1 processors 394s 408s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 408s OK 408s 408s Running tests/pspw_stress/pspw_stress 408s 408s cleaning scratch 408s copying input and verified output files 408s running nwchem (/usr/bin/nwchem) with 1 processors 408s 424s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 424s OK 424s 424s Running tests/mcscf_ch2/mcscf_ch2 424s 424s cleaning scratch 424s copying input and verified output files 424s running nwchem (/usr/bin/nwchem) with 1 processors 424s 445s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 445s OK 445s 445s Running tests/dft_li2freq/dft_li2freq 445s 445s cleaning scratch 445s copying input and verified output files 445s running nwchem (/usr/bin/nwchem) with 1 processors 445s 495s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 495s OK 495s 495s Running tests/n2_ccsd/n2_ccsd 495s 495s cleaning scratch 495s copying input and verified output files 495s running nwchem (/usr/bin/nwchem) with 1 processors 495s 530s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 530s OK 530s 530s Running tests/tce_ccsd_t_h2o/tce_ccsd_t_h2o 530s 530s cleaning scratch 530s copying input and verified output files 530s running nwchem (/usr/bin/nwchem) with 1 processors 530s 533s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 533s OK 533s 533s Running tests/tddft_h2o/tddft_h2o 534s 534s cleaning scratch 534s copying input and verified output files 534s running nwchem (/usr/bin/nwchem) with 1 processors 534s 563s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 563s OK 563s 563s Running tests/rt_tddft_dimer_charge/rt_tddft_dimer_charge 563s 563s cleaning scratch 563s copying input and verified output files 563s running nwchem (/usr/bin/nwchem) with 1 processors 563s 798s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 798s OK 798s 798s Running tests/tce_eaccsd_ozone/tce_eaccsd_ozone 798s 798s cleaning scratch 798s copying input and verified output files 798s running nwchem (/usr/bin/nwchem) with 1 processors 798s 814s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 814s OK 814s 814s Running tests/tce_ipccsd_f2/tce_ipccsd_f2 814s 814s cleaning scratch 814s copying input and verified output files 814s running nwchem (/usr/bin/nwchem) with 1 processors 814s 818s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 818s OK 818s 818s Running tests/tce_hyperpolar_ccsd_small/tce_hyperpolar_ccsd_small 818s 818s cleaning scratch 818s copying input and verified output files 818s running nwchem (/usr/bin/nwchem) with 1 processors 818s 881s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 881s OK 881s 881s Running tests/mp2_scs_n2/mp2_scs_n2 881s 881s cleaning scratch 881s copying input and verified output files 881s running nwchem (/usr/bin/nwchem) with 1 processors 881s 900s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 900s OK 900s 900s Running tests/tddftgrad_n2_uks/tddftgrad_n2_uks 900s 900s cleaning scratch 900s copying input and verified output files 900s running nwchem (/usr/bin/nwchem) with 1 processors 900s 934s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 934s OK 934s 934s Running tests/tddftgrad_ch2o/tddftgrad_ch2o 934s 934s cleaning scratch 934s copying input and verified output files 934s running nwchem (/usr/bin/nwchem) with 1 processors 934s 944s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 944s OK 944s 944s Running tests/water/water_md 944s 944s cleaning scratch 944s copying input and verified output files 944s running nwchem (/usr/bin/nwchem) with 1 processors 944s 945s verifying nwout ...... skipped 945s verifying test ....... completed 945s 945s Running tests/water/water_pme 945s 945s cleaning scratch 945s copying input and verified output files 945s running nwchem (/usr/bin/nwchem) with 1 processors 945s 945s verifying nwout ...... skipped 945s verifying test ....... completed 945s 945s Running tests/pspw_md/pspw_md 945s 945s cleaning scratch 945s copying input and verified output files 945s running nwchem (/usr/bin/nwchem) with 1 processors 945s 961s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 961s OK 961s 961s Running tests/cosmo_h3co/cosmo_h3co 961s 961s cleaning scratch 961s copying input and verified output files 961s running nwchem (/usr/bin/nwchem) with 1 processors 961s 970s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 970s OK 970s 970s OK 970s autopkgtest [19:19:26]: test testsuite.sh: -----------------------] 970s autopkgtest [19:19:26]: test testsuite.sh: - - - - - - - - - - results - - - - - - - - - - 970s testsuite.sh PASS 971s autopkgtest [19:19:27]: test testsuite-openmpi: preparing testbed 1641s autopkgtest [19:30:37]: testbed dpkg architecture: amd64 1641s autopkgtest [19:30:37]: testbed apt version: 3.0.0 1641s autopkgtest [19:30:37]: @@@@@@@@@@@@@@@@@@@@ test bed setup 1641s autopkgtest [19:30:37]: testbed release detected to be: questing 1642s autopkgtest [19:30:38]: updating testbed package index (apt update) 1642s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB] 1643s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 1643s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 1643s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 1643s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [1442 kB] 1643s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [149 kB] 1643s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [33.7 kB] 1643s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 Packages [203 kB] 1643s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/main i386 Packages [146 kB] 1643s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/universe amd64 Packages [1424 kB] 1643s Get:11 http://ftpmaster.internal/ubuntu questing-proposed/universe i386 Packages [576 kB] 1643s Get:12 http://ftpmaster.internal/ubuntu questing-proposed/multiverse amd64 Packages [48.6 kB] 1643s Get:13 http://ftpmaster.internal/ubuntu questing-proposed/multiverse i386 Packages [23.1 kB] 1643s Fetched 4155 kB in 1s (3899 kB/s) 1644s Reading package lists... 1645s autopkgtest [19:30:41]: upgrading testbed (apt dist-upgrade and autopurge) 1645s Reading package lists... 1645s Building dependency tree... 1645s Reading state information... 1645s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 1645s Starting 2 pkgProblemResolver with broken count: 0 1645s Done 1646s Entering ResolveByKeep 1646s 1646s Calculating upgrade... 1646s The following packages will be upgraded: 1646s cloud-init cloud-init-base debianutils libmbim-glib4 libmbim-proxy 1646s libnftnl11 libpython3.13 libpython3.13-minimal libpython3.13-stdlib 1646s libqmi-glib5 libqmi-proxy libsepol2 python3-lazr.restfulclient python3.13 1646s python3.13-gdbm python3.13-minimal sos 1646s 17 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1646s Need to get 11.1 MB of archives. 1646s After this operation, 96.3 kB disk space will be freed. 1646s Get:1 http://ftpmaster.internal/ubuntu questing/main amd64 debianutils amd64 5.22 [93.0 kB] 1647s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 python3.13 amd64 3.13.3-2 [739 kB] 1647s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 libpython3.13 amd64 3.13.3-2 [2342 kB] 1647s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 libpython3.13-stdlib amd64 3.13.3-2 [2071 kB] 1647s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 python3.13-minimal amd64 3.13.3-2 [2372 kB] 1647s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 libpython3.13-minimal amd64 3.13.3-2 [884 kB] 1647s Get:7 http://ftpmaster.internal/ubuntu questing/main amd64 libsepol2 amd64 3.8.1-1 [327 kB] 1647s Get:8 http://ftpmaster.internal/ubuntu questing/main amd64 libnftnl11 amd64 1.2.9-1 [69.1 kB] 1647s Get:9 http://ftpmaster.internal/ubuntu questing/main amd64 cloud-init-base all 25.2~1g7a0265d3-0ubuntu1 [619 kB] 1647s Get:10 http://ftpmaster.internal/ubuntu questing/main amd64 libmbim-proxy amd64 1.32.0-1 [6276 B] 1647s Get:11 http://ftpmaster.internal/ubuntu questing/main amd64 libmbim-glib4 amd64 1.32.0-1 [233 kB] 1647s Get:12 http://ftpmaster.internal/ubuntu questing/main amd64 libqmi-proxy amd64 1.36.0-1 [6220 B] 1647s Get:13 http://ftpmaster.internal/ubuntu questing/main amd64 libqmi-glib5 amd64 1.36.0-1 [920 kB] 1647s Get:14 http://ftpmaster.internal/ubuntu questing/main amd64 python3-lazr.restfulclient all 0.14.6-3 [51.0 kB] 1647s Get:15 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 python3.13-gdbm amd64 3.13.3-2 [32.1 kB] 1647s Get:16 http://ftpmaster.internal/ubuntu questing/main amd64 sos all 4.9.1-1 [367 kB] 1647s Get:17 http://ftpmaster.internal/ubuntu questing/main amd64 cloud-init all 25.2~1g7a0265d3-0ubuntu1 [2106 B] 1648s Preconfiguring packages ... 1648s Fetched 11.1 MB in 1s (11.0 MB/s) 1648s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80514 files and directories currently installed.) 1648s Preparing to unpack .../debianutils_5.22_amd64.deb ... 1648s Unpacking debianutils (5.22) over (5.21) ... 1648s Setting up debianutils (5.22) ... 1648s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80514 files and directories currently installed.) 1648s Preparing to unpack .../0-python3.13_3.13.3-2_amd64.deb ... 1648s Unpacking python3.13 (3.13.3-2) over (3.13.3-1) ... 1648s Preparing to unpack .../1-libpython3.13_3.13.3-2_amd64.deb ... 1648s Unpacking libpython3.13:amd64 (3.13.3-2) over (3.13.3-1) ... 1648s Preparing to unpack .../2-libpython3.13-stdlib_3.13.3-2_amd64.deb ... 1648s Unpacking libpython3.13-stdlib:amd64 (3.13.3-2) over (3.13.3-1) ... 1648s Preparing to unpack .../3-python3.13-minimal_3.13.3-2_amd64.deb ... 1648s Unpacking python3.13-minimal (3.13.3-2) over (3.13.3-1) ... 1649s Preparing to unpack .../4-libpython3.13-minimal_3.13.3-2_amd64.deb ... 1649s Unpacking libpython3.13-minimal:amd64 (3.13.3-2) over (3.13.3-1) ... 1649s Preparing to unpack .../5-libsepol2_3.8.1-1_amd64.deb ... 1649s Unpacking libsepol2:amd64 (3.8.1-1) over (3.7-1) ... 1649s Setting up libsepol2:amd64 (3.8.1-1) ... 1649s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80514 files and directories currently installed.) 1649s Preparing to unpack .../0-libnftnl11_1.2.9-1_amd64.deb ... 1649s Unpacking libnftnl11:amd64 (1.2.9-1) over (1.2.8-1) ... 1649s Preparing to unpack .../1-cloud-init-base_25.2~1g7a0265d3-0ubuntu1_all.deb ... 1649s Unpacking cloud-init-base (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ... 1649s Preparing to unpack .../2-libmbim-proxy_1.32.0-1_amd64.deb ... 1649s Unpacking libmbim-proxy (1.32.0-1) over (1.31.2-0ubuntu4) ... 1649s Preparing to unpack .../3-libmbim-glib4_1.32.0-1_amd64.deb ... 1649s Unpacking libmbim-glib4:amd64 (1.32.0-1) over (1.31.2-0ubuntu4) ... 1649s Preparing to unpack .../4-libqmi-proxy_1.36.0-1_amd64.deb ... 1649s Unpacking libqmi-proxy (1.36.0-1) over (1.35.6-1) ... 1650s Preparing to unpack .../5-libqmi-glib5_1.36.0-1_amd64.deb ... 1650s Unpacking libqmi-glib5:amd64 (1.36.0-1) over (1.35.6-1) ... 1650s Preparing to unpack .../6-python3-lazr.restfulclient_0.14.6-3_all.deb ... 1650s Unpacking python3-lazr.restfulclient (0.14.6-3) over (0.14.6-2) ... 1650s Preparing to unpack .../7-python3.13-gdbm_3.13.3-2_amd64.deb ... 1650s Unpacking python3.13-gdbm (3.13.3-2) over (3.13.3-1) ... 1650s Preparing to unpack .../8-sos_4.9.1-1_all.deb ... 1650s Unpacking sos (4.9.1-1) over (4.9.0-6) ... 1650s Preparing to unpack .../9-cloud-init_25.2~1g7a0265d3-0ubuntu1_all.deb ... 1650s Unpacking cloud-init (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ... 1650s Setting up sos (4.9.1-1) ... 1651s Setting up libnftnl11:amd64 (1.2.9-1) ... 1651s Setting up cloud-init-base (25.2~1g7a0265d3-0ubuntu1) ... 1652s Setting up libpython3.13-minimal:amd64 (3.13.3-2) ... 1652s Setting up python3.13-minimal (3.13.3-2) ... 1652s Setting up python3-lazr.restfulclient (0.14.6-3) ... 1653s Setting up libpython3.13-stdlib:amd64 (3.13.3-2) ... 1653s Setting up libmbim-glib4:amd64 (1.32.0-1) ... 1653s Setting up python3.13-gdbm (3.13.3-2) ... 1653s Setting up libpython3.13:amd64 (3.13.3-2) ... 1653s Setting up cloud-init (25.2~1g7a0265d3-0ubuntu1) ... 1653s Setting up python3.13 (3.13.3-2) ... 1653s Setting up libmbim-proxy (1.32.0-1) ... 1653s Setting up libqmi-glib5:amd64 (1.36.0-1) ... 1653s Setting up libqmi-proxy (1.36.0-1) ... 1653s Processing triggers for man-db (2.13.0-1) ... 1655s Processing triggers for libc-bin (2.41-6ubuntu1) ... 1655s Processing triggers for rsyslog (8.2412.0-2ubuntu2) ... 1655s Processing triggers for systemd (257.4-1ubuntu3) ... 1655s Reading package lists... 1655s Building dependency tree... 1655s Reading state information... 1656s Starting pkgProblemResolver with broken count: 0 1656s Starting 2 pkgProblemResolver with broken count: 0 1656s Done 1656s Solving dependencies... 1656s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1656s autopkgtest [19:30:52]: rebooting testbed after setup commands that affected boot 1660s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 1677s Reading package lists... 1677s Building dependency tree... 1677s Reading state information... 1677s Starting pkgProblemResolver with broken count: 0 1677s Starting 2 pkgProblemResolver with broken count: 0 1677s Done 1678s The following NEW packages will be installed: 1678s libamd-comgr2 libamdhip64-5 libblas3 libevent-pthreads-2.1-7t64 libfabric1 1678s libgfortran5 libgomp1 libhsa-runtime64-1 libhsakmt1 libhwloc-plugins 1678s libhwloc15 libibmad5 libibumad3 liblapack3 libllvm17t64 libmunge2 1678s libopenmpi40 libpciaccess0 libpmix2t64 libpsm-infinipath1 libpsm2-2 1678s librdmacm1t64 libscalapack-openmpi2.2 libucx0 libxnvctrl0 mpi-default-bin 1678s nwchem-data nwchem-openmpi ocl-icd-libopencl1 openmpi-bin openmpi-common 1678s 0 upgraded, 31 newly installed, 0 to remove and 0 not upgraded. 1678s Need to get 84.6 MB of archives. 1678s After this operation, 378 MB of additional disk space will be used. 1678s Get:1 http://ftpmaster.internal/ubuntu questing/universe amd64 libllvm17t64 amd64 1:17.0.6-21 [26.0 MB] 1679s Get:2 http://ftpmaster.internal/ubuntu questing/universe amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3build2 [14.4 MB] 1679s Get:3 http://ftpmaster.internal/ubuntu questing/universe amd64 libhsakmt1 amd64 5.7.0-1build1 [62.9 kB] 1679s Get:4 http://ftpmaster.internal/ubuntu questing/universe amd64 libhsa-runtime64-1 amd64 5.7.1-2build1 [491 kB] 1679s Get:5 http://ftpmaster.internal/ubuntu questing/universe amd64 libamdhip64-5 amd64 5.7.1-5.1 [9695 kB] 1680s Get:6 http://ftpmaster.internal/ubuntu questing/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 1680s Get:7 http://ftpmaster.internal/ubuntu questing/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10 [7966 B] 1680s Get:8 http://ftpmaster.internal/ubuntu questing/universe amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.4 [179 kB] 1680s Get:9 http://ftpmaster.internal/ubuntu questing/universe amd64 libpsm2-2 amd64 11.2.185-2.1 [193 kB] 1680s Get:10 http://ftpmaster.internal/ubuntu questing/main amd64 librdmacm1t64 amd64 56.0-4ubuntu1 [71.5 kB] 1680s Get:11 http://ftpmaster.internal/ubuntu questing/universe amd64 libfabric1 amd64 1.17.0-3.1 [789 kB] 1680s Get:12 http://ftpmaster.internal/ubuntu questing/main amd64 libgfortran5 amd64 15-20250404-0ubuntu1 [926 kB] 1680s Get:13 http://ftpmaster.internal/ubuntu questing/main amd64 libgomp1 amd64 15-20250404-0ubuntu1 [151 kB] 1680s Get:14 http://ftpmaster.internal/ubuntu questing/universe amd64 libhwloc15 amd64 2.12.0-1 [194 kB] 1680s Get:15 http://ftpmaster.internal/ubuntu questing/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 1680s Get:16 http://ftpmaster.internal/ubuntu questing/universe amd64 libmunge2 amd64 0.5.16-1 [16.5 kB] 1680s Get:17 http://ftpmaster.internal/ubuntu questing/main amd64 libpciaccess0 amd64 0.17-3build1 [18.6 kB] 1680s Get:18 http://ftpmaster.internal/ubuntu questing/main amd64 libxnvctrl0 amd64 510.47.03-0ubuntu4 [12.6 kB] 1680s Get:19 http://ftpmaster.internal/ubuntu questing/universe amd64 ocl-icd-libopencl1 amd64 2.3.2-1build1 [38.5 kB] 1680s Get:20 http://ftpmaster.internal/ubuntu questing/universe amd64 libhwloc-plugins amd64 2.12.0-1 [16.0 kB] 1680s Get:21 http://ftpmaster.internal/ubuntu questing/universe amd64 libpmix2t64 amd64 5.0.6-5 [714 kB] 1680s Get:22 http://ftpmaster.internal/ubuntu questing/main amd64 libibumad3 amd64 56.0-4ubuntu1 [31.2 kB] 1680s Get:23 http://ftpmaster.internal/ubuntu questing/main amd64 libibmad5 amd64 56.0-4ubuntu1 [43.9 kB] 1680s Get:24 http://ftpmaster.internal/ubuntu questing/universe amd64 libucx0 amd64 1.18.1+ds-2 [1293 kB] 1680s Get:25 http://ftpmaster.internal/ubuntu questing/universe amd64 libopenmpi40 amd64 5.0.7-1 [2526 kB] 1680s Get:26 http://ftpmaster.internal/ubuntu questing/universe amd64 openmpi-common all 5.0.7-1 [97.9 kB] 1680s Get:27 http://ftpmaster.internal/ubuntu questing/universe amd64 openmpi-bin amd64 5.0.7-1 [192 kB] 1680s Get:28 http://ftpmaster.internal/ubuntu questing/universe amd64 mpi-default-bin amd64 1.18 [2510 B] 1680s Get:29 http://ftpmaster.internal/ubuntu questing/universe amd64 libscalapack-openmpi2.2 amd64 2.2.2-1ubuntu1 [2073 kB] 1680s Get:30 http://ftpmaster.internal/ubuntu questing/universe amd64 nwchem-data all 7.2.3-7build1 [6076 kB] 1681s Get:31 http://ftpmaster.internal/ubuntu questing/universe amd64 nwchem-openmpi amd64 7.2.3-7build1 [14.8 MB] 1682s Fetched 84.6 MB in 4s (22.2 MB/s) 1682s Selecting previously unselected package libllvm17t64:amd64. 1682s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80518 files and directories currently installed.) 1682s Preparing to unpack .../00-libllvm17t64_1%3a17.0.6-21_amd64.deb ... 1682s Unpacking libllvm17t64:amd64 (1:17.0.6-21) ... 1682s Selecting previously unselected package libamd-comgr2:amd64. 1682s Preparing to unpack .../01-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3build2_amd64.deb ... 1682s Unpacking libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3build2) ... 1683s Selecting previously unselected package libhsakmt1:amd64. 1683s Preparing to unpack .../02-libhsakmt1_5.7.0-1build1_amd64.deb ... 1683s Unpacking libhsakmt1:amd64 (5.7.0-1build1) ... 1683s Selecting previously unselected package libhsa-runtime64-1. 1683s Preparing to unpack .../03-libhsa-runtime64-1_5.7.1-2build1_amd64.deb ... 1683s Unpacking libhsa-runtime64-1 (5.7.1-2build1) ... 1683s Selecting previously unselected package libamdhip64-5. 1683s Preparing to unpack .../04-libamdhip64-5_5.7.1-5.1_amd64.deb ... 1683s Unpacking libamdhip64-5 (5.7.1-5.1) ... 1683s Selecting previously unselected package libblas3:amd64. 1683s Preparing to unpack .../05-libblas3_3.12.1-2_amd64.deb ... 1683s Unpacking libblas3:amd64 (3.12.1-2) ... 1683s Selecting previously unselected package libevent-pthreads-2.1-7t64:amd64. 1683s Preparing to unpack .../06-libevent-pthreads-2.1-7t64_2.1.12-stable-10_amd64.deb ... 1683s Unpacking libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10) ... 1683s Selecting previously unselected package libpsm-infinipath1. 1683s Preparing to unpack .../07-libpsm-infinipath1_3.3+20.604758e7-6.4_amd64.deb ... 1683s Unpacking libpsm-infinipath1 (3.3+20.604758e7-6.4) ... 1683s Selecting previously unselected package libpsm2-2. 1683s Preparing to unpack .../08-libpsm2-2_11.2.185-2.1_amd64.deb ... 1683s Unpacking libpsm2-2 (11.2.185-2.1) ... 1683s Selecting previously unselected package librdmacm1t64:amd64. 1683s Preparing to unpack .../09-librdmacm1t64_56.0-4ubuntu1_amd64.deb ... 1683s Unpacking librdmacm1t64:amd64 (56.0-4ubuntu1) ... 1683s Selecting previously unselected package libfabric1:amd64. 1683s Preparing to unpack .../10-libfabric1_1.17.0-3.1_amd64.deb ... 1683s Unpacking libfabric1:amd64 (1.17.0-3.1) ... 1683s Selecting previously unselected package libgfortran5:amd64. 1683s Preparing to unpack .../11-libgfortran5_15-20250404-0ubuntu1_amd64.deb ... 1683s Unpacking libgfortran5:amd64 (15-20250404-0ubuntu1) ... 1683s Selecting previously unselected package libgomp1:amd64. 1683s Preparing to unpack .../12-libgomp1_15-20250404-0ubuntu1_amd64.deb ... 1683s Unpacking libgomp1:amd64 (15-20250404-0ubuntu1) ... 1683s Selecting previously unselected package libhwloc15:amd64. 1683s Preparing to unpack .../13-libhwloc15_2.12.0-1_amd64.deb ... 1683s Unpacking libhwloc15:amd64 (2.12.0-1) ... 1683s Selecting previously unselected package liblapack3:amd64. 1683s Preparing to unpack .../14-liblapack3_3.12.1-2_amd64.deb ... 1683s Unpacking liblapack3:amd64 (3.12.1-2) ... 1683s Selecting previously unselected package libmunge2:amd64. 1683s Preparing to unpack .../15-libmunge2_0.5.16-1_amd64.deb ... 1683s Unpacking libmunge2:amd64 (0.5.16-1) ... 1683s Selecting previously unselected package libpciaccess0:amd64. 1683s Preparing to unpack .../16-libpciaccess0_0.17-3build1_amd64.deb ... 1683s Unpacking libpciaccess0:amd64 (0.17-3build1) ... 1683s Selecting previously unselected package libxnvctrl0:amd64. 1683s Preparing to unpack .../17-libxnvctrl0_510.47.03-0ubuntu4_amd64.deb ... 1683s Unpacking libxnvctrl0:amd64 (510.47.03-0ubuntu4) ... 1683s Selecting previously unselected package ocl-icd-libopencl1:amd64. 1683s Preparing to unpack .../18-ocl-icd-libopencl1_2.3.2-1build1_amd64.deb ... 1683s Unpacking ocl-icd-libopencl1:amd64 (2.3.2-1build1) ... 1683s Selecting previously unselected package libhwloc-plugins:amd64. 1683s Preparing to unpack .../19-libhwloc-plugins_2.12.0-1_amd64.deb ... 1683s Unpacking libhwloc-plugins:amd64 (2.12.0-1) ... 1683s Selecting previously unselected package libpmix2t64:amd64. 1683s Preparing to unpack .../20-libpmix2t64_5.0.6-5_amd64.deb ... 1683s Unpacking libpmix2t64:amd64 (5.0.6-5) ... 1683s Selecting previously unselected package libibumad3:amd64. 1683s Preparing to unpack .../21-libibumad3_56.0-4ubuntu1_amd64.deb ... 1683s Unpacking libibumad3:amd64 (56.0-4ubuntu1) ... 1684s Selecting previously unselected package libibmad5:amd64. 1684s Preparing to unpack .../22-libibmad5_56.0-4ubuntu1_amd64.deb ... 1684s Unpacking libibmad5:amd64 (56.0-4ubuntu1) ... 1684s Selecting previously unselected package libucx0:amd64. 1684s Preparing to unpack .../23-libucx0_1.18.1+ds-2_amd64.deb ... 1684s Unpacking libucx0:amd64 (1.18.1+ds-2) ... 1684s Selecting previously unselected package libopenmpi40:amd64. 1684s Preparing to unpack .../24-libopenmpi40_5.0.7-1_amd64.deb ... 1684s Unpacking libopenmpi40:amd64 (5.0.7-1) ... 1684s Selecting previously unselected package openmpi-common. 1684s Preparing to unpack .../25-openmpi-common_5.0.7-1_all.deb ... 1684s Unpacking openmpi-common (5.0.7-1) ... 1684s Selecting previously unselected package openmpi-bin. 1684s Preparing to unpack .../26-openmpi-bin_5.0.7-1_amd64.deb ... 1684s Unpacking openmpi-bin (5.0.7-1) ... 1684s Selecting previously unselected package mpi-default-bin. 1684s Preparing to unpack .../27-mpi-default-bin_1.18_amd64.deb ... 1684s Unpacking mpi-default-bin (1.18) ... 1684s Selecting previously unselected package libscalapack-openmpi2.2:amd64. 1684s Preparing to unpack .../28-libscalapack-openmpi2.2_2.2.2-1ubuntu1_amd64.deb ... 1684s Unpacking libscalapack-openmpi2.2:amd64 (2.2.2-1ubuntu1) ... 1684s Selecting previously unselected package nwchem-data. 1684s Preparing to unpack .../29-nwchem-data_7.2.3-7build1_all.deb ... 1684s Unpacking nwchem-data (7.2.3-7build1) ... 1684s Selecting previously unselected package nwchem-openmpi. 1684s Preparing to unpack .../30-nwchem-openmpi_7.2.3-7build1_amd64.deb ... 1684s Unpacking nwchem-openmpi (7.2.3-7build1) ... 1684s Setting up libpciaccess0:amd64 (0.17-3build1) ... 1684s Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10) ... 1684s Setting up nwchem-data (7.2.3-7build1) ... 1685s Setting up libibumad3:amd64 (56.0-4ubuntu1) ... 1685s Setting up libibmad5:amd64 (56.0-4ubuntu1) ... 1685s Setting up libgomp1:amd64 (15-20250404-0ubuntu1) ... 1685s Setting up libxnvctrl0:amd64 (510.47.03-0ubuntu4) ... 1685s Setting up libblas3:amd64 (3.12.1-2) ... 1685s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 1685s Setting up libmunge2:amd64 (0.5.16-1) ... 1685s Setting up libllvm17t64:amd64 (1:17.0.6-21) ... 1685s Setting up libhwloc15:amd64 (2.12.0-1) ... 1685s Setting up libgfortran5:amd64 (15-20250404-0ubuntu1) ... 1685s Setting up ocl-icd-libopencl1:amd64 (2.3.2-1build1) ... 1685s Setting up libpsm2-2 (11.2.185-2.1) ... 1685s Setting up openmpi-common (5.0.7-1) ... 1685s Setting up librdmacm1t64:amd64 (56.0-4ubuntu1) ... 1685s Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3build2) ... 1685s Setting up libpsm-infinipath1 (3.3+20.604758e7-6.4) ... 1685s update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode 1685s Setting up libhsakmt1:amd64 (5.7.0-1build1) ... 1685s Setting up libfabric1:amd64 (1.17.0-3.1) ... 1685s Setting up liblapack3:amd64 (3.12.1-2) ... 1685s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 1685s Setting up libhwloc-plugins:amd64 (2.12.0-1) ... 1685s Setting up libpmix2t64:amd64 (5.0.6-5) ... 1685s Setting up libhsa-runtime64-1 (5.7.1-2build1) ... 1685s Setting up libamdhip64-5 (5.7.1-5.1) ... 1685s Setting up libucx0:amd64 (1.18.1+ds-2) ... 1685s Setting up libopenmpi40:amd64 (5.0.7-1) ... 1685s Setting up openmpi-bin (5.0.7-1) ... 1685s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 1685s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 1685s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 1685s Setting up mpi-default-bin (1.18) ... 1685s Setting up libscalapack-openmpi2.2:amd64 (2.2.2-1ubuntu1) ... 1685s Setting up nwchem-openmpi (7.2.3-7build1) ... 1685s Processing triggers for man-db (2.13.0-1) ... 1685s Processing triggers for libc-bin (2.41-6ubuntu1) ... 1775s autopkgtest [19:32:51]: test testsuite-openmpi: [----------------------- 1776s ===== TESTING NWCHEM BUILD FOR openmpi ===== 1776s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 1776s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 1776s 1776s 1776s Running tests/dft_he2+/dft_he2+ 1776s 1776s cleaning scratch 1776s copying input and verified output files 1776s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1776s 1787s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1787s OK 1787s 1787s Running tests/qmmm_grad0/qmmm_grad0 1787s 1787s cleaning scratch 1787s copying input and verified output files 1787s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1787s 1791s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1791s OK 1791s 1791s Running tests/auh2o/auh2o 1791s 1791s cleaning scratch 1791s copying input and verified output files 1791s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1791s 1794s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1794s OK 1794s 1794s Running tests/autosym/autosym 1794s 1794s cleaning scratch 1794s copying input and verified output files 1794s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1794s 1803s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1803s OK 1803s 1803s Running tests/h2mp2/h2mp2 1803s 1803s cleaning scratch 1803s copying input and verified output files 1803s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1803s 1806s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1806s OK 1806s 1806s Running tests/h2o/h2o 1806s 1806s cleaning scratch 1806s copying input and verified output files 1806s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1806s 1807s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1807s OK 1807s 1807s Running tests/hess_h2o/hess_h2o 1807s 1807s cleaning scratch 1807s copying input and verified output files 1807s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1807s 1813s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1813s OK 1813s 1813s Running tests/prop_h2o/prop_h2o 1813s 1813s cleaning scratch 1813s copying input and verified output files 1813s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1813s 1816s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1816s OK 1816s 1816s Running tests/geom_zmatrix/geom_zmatrix 1816s 1816s cleaning scratch 1816s copying input and verified output files 1816s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1816s 1819s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1819s OK 1819s 1819s Running tests/rimp2_ne/rimp2_ne 1819s 1819s cleaning scratch 1819s copying input and verified output files 1819s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1819s 1822s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1822s OK 1822s 1822s Running tests/small_intchk/small_intchk 1822s 1822s cleaning scratch 1822s copying input and verified output files 1822s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1822s 1828s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1828s OK 1828s 1828s Running tests/tagcheck/tagcheck 1828s 1828s cleaning scratch 1828s copying input and verified output files 1828s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1828s 1831s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1831s OK 1831s 1831s Running tests/testtab/testtab 1831s 1831s cleaning scratch 1831s copying input and verified output files 1831s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1831s 1832s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1832s OK 1832s 1832s Running tests/h2o_dk/h2o_dk 1832s 1832s cleaning scratch 1832s copying input and verified output files 1832s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1832s 1837s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1837s OK 1837s 1837s Running tests/cosmo_h2o/cosmo_h2o 1837s 1837s cleaning scratch 1837s copying input and verified output files 1837s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1837s 1839s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1839s OK 1839s 1839s Running tests/ch5n_nbo/ch5n_nbo 1839s 1839s cleaning scratch 1839s copying input and verified output files 1839s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1839s 1840s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1840s OK 1840s 1840s Running tests/h2s_finite/h2s_finite 1840s 1840s cleaning scratch 1840s copying input and verified output files 1840s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1840s 1844s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1844s OK 1844s 1844s Running tests/pyqa3/pyqa3 1844s 1844s cleaning scratch 1844s copying input and verified output files 1844s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1844s 1847s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1847s OK 1847s 1847s Running tests/startag/startag 1847s 1847s cleaning scratch 1847s copying input and verified output files 1847s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1847s 1849s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1849s OK 1849s 1849s Running tests/esp/esp 1849s 1849s cleaning scratch 1849s copying input and verified output files 1849s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1849s 1851s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1851s ESP charges match 1851s 1851s 1851s Running tests/esp_uhf/esp_uhf 1851s 1851s cleaning scratch 1851s copying input and verified output files 1851s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1851s 1855s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1855s ESP charges match 1855s 1855s 1855s Running tests/dft_bsse/dft_bsse 1855s 1855s cleaning scratch 1855s copying input and verified output files 1855s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1855s 1858s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1858s OK 1858s 1858s Running tests/dplot_dft/dplot_dft 1858s 1858s cleaning scratch 1858s copying input and verified output files 1858s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1858s 1860s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1860s OK 1860s 1860s Running tests/dft_meta/dft_meta 1860s 1860s cleaning scratch 1860s copying input and verified output files 1860s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1860s 1899s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1899s OK 1899s 1899s Running tests/dft_mpwb1khf/dft_mpwb1khf 1899s 1899s cleaning scratch 1899s copying input and verified output files 1899s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1899s 1903s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1903s OK 1903s 1903s Running tests/prop_uhf_h2o/prop_uhf_h2o 1903s 1903s cleaning scratch 1903s copying input and verified output files 1903s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1903s 1918s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1918s OK 1918s 1918s Running tests/et_zn_dimer/et_zn_dimer 1918s 1918s cleaning scratch 1918s copying input and verified output files 1918s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1918s 1935s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1935s OK 1935s 1935s Running tests/vectors_rotate/vectors_rotate 1935s 1935s cleaning scratch 1935s copying input and verified output files 1935s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1935s 1938s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1938s OK 1938s 1938s Running tests/sad_ch3hf/sad_ch3hf 1938s 1938s cleaning scratch 1938s copying input and verified output files 1938s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1938s 1949s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1949s OK 1949s 1949s Running tests/band/band 1949s 1949s cleaning scratch 1949s copying input and verified output files 1949s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1949s 1956s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1956s OK 1956s 1956s Running tests/pspw/pspw 1956s 1956s cleaning scratch 1956s copying input and verified output files 1956s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1956s 1967s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1967s OK 1967s 1967s Running tests/pspw_stress/pspw_stress 1967s 1967s cleaning scratch 1967s copying input and verified output files 1967s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1967s 1981s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1981s OK 1981s 1981s Running tests/mcscf_ch2/mcscf_ch2 1981s 1981s cleaning scratch 1981s copying input and verified output files 1981s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1981s 2002s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2002s OK 2002s 2002s Running tests/dft_li2freq/dft_li2freq 2002s 2002s cleaning scratch 2002s copying input and verified output files 2002s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2002s 2053s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2053s OK 2053s 2053s Running tests/n2_ccsd/n2_ccsd 2053s 2053s cleaning scratch 2053s copying input and verified output files 2053s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2053s 2088s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2088s OK 2088s 2088s Running tests/tce_ccsd_t_h2o/tce_ccsd_t_h2o 2088s 2088s cleaning scratch 2088s copying input and verified output files 2088s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2088s 2092s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2092s OK 2092s 2092s Running tests/tddft_h2o/tddft_h2o 2092s 2092s cleaning scratch 2092s copying input and verified output files 2092s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2092s 2122s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2122s OK 2122s 2122s Running tests/rt_tddft_dimer_charge/rt_tddft_dimer_charge 2122s 2122s cleaning scratch 2122s copying input and verified output files 2122s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2122s 2364s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2364s OK 2364s 2364s Running tests/tce_eaccsd_ozone/tce_eaccsd_ozone 2364s 2364s cleaning scratch 2364s copying input and verified output files 2364s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2364s 2379s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2379s OK 2379s 2379s Running tests/tce_ipccsd_f2/tce_ipccsd_f2 2379s 2379s cleaning scratch 2379s copying input and verified output files 2379s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2379s 2383s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2383s OK 2383s 2383s Running tests/tce_hyperpolar_ccsd_small/tce_hyperpolar_ccsd_small 2383s 2383s cleaning scratch 2383s copying input and verified output files 2383s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2383s 2439s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2439s OK 2439s 2439s Running tests/mp2_scs_n2/mp2_scs_n2 2439s 2439s cleaning scratch 2439s copying input and verified output files 2439s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2439s 2455s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2455s OK 2455s 2455s Running tests/tddftgrad_n2_uks/tddftgrad_n2_uks 2455s 2455s cleaning scratch 2455s copying input and verified output files 2455s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2455s 2490s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2490s OK 2490s 2490s Running tests/tddftgrad_ch2o/tddftgrad_ch2o 2490s 2490s cleaning scratch 2490s copying input and verified output files 2490s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2490s 2499s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2499s OK 2499s 2499s Running tests/water/water_md 2499s 2499s cleaning scratch 2499s copying input and verified output files 2499s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2499s 2500s verifying nwout ...... skipped 2500s verifying test ....... completed 2500s 2500s Running tests/water/water_pme 2500s 2500s cleaning scratch 2500s copying input and verified output files 2500s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2500s 2500s verifying nwout ...... skipped 2500s verifying test ....... completed 2500s 2500s Running tests/pspw_md/pspw_md 2500s 2500s cleaning scratch 2500s copying input and verified output files 2500s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2500s 2514s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2514s OK 2514s 2514s Running tests/cosmo_h3co/cosmo_h3co 2514s 2514s cleaning scratch 2514s copying input and verified output files 2514s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 2514s 2523s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2523s OK 2523s 2523s OK 2523s autopkgtest [19:45:19]: test testsuite-openmpi: -----------------------] 2524s testsuite-openmpi PASS 2524s autopkgtest [19:45:20]: test testsuite-openmpi: - - - - - - - - - - results - - - - - - - - - - 2524s autopkgtest [19:45:20]: test testsuite-mpich: preparing testbed 2592s autopkgtest [19:46:28]: testbed dpkg architecture: amd64 2592s autopkgtest [19:46:28]: testbed apt version: 3.0.0 2592s autopkgtest [19:46:28]: @@@@@@@@@@@@@@@@@@@@ test bed setup 2593s autopkgtest [19:46:29]: testbed release detected to be: questing 2593s autopkgtest [19:46:29]: updating testbed package index (apt update) 2594s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB] 2594s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 2594s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 2594s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 2594s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [1442 kB] 2595s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [33.7 kB] 2595s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [149 kB] 2595s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main i386 Packages [146 kB] 2595s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 Packages [203 kB] 2595s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/universe i386 Packages [576 kB] 2595s Get:11 http://ftpmaster.internal/ubuntu questing-proposed/universe amd64 Packages [1424 kB] 2595s Get:12 http://ftpmaster.internal/ubuntu questing-proposed/multiverse amd64 Packages [48.6 kB] 2595s Get:13 http://ftpmaster.internal/ubuntu questing-proposed/multiverse i386 Packages [23.1 kB] 2595s Fetched 4155 kB in 1s (3214 kB/s) 2596s Reading package lists... 2597s autopkgtest [19:46:33]: upgrading testbed (apt dist-upgrade and autopurge) 2597s Reading package lists... 2597s Building dependency tree... 2597s Reading state information... 2598s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 2598s Starting 2 pkgProblemResolver with broken count: 0 2598s Done 2599s Entering ResolveByKeep 2599s 2599s Calculating upgrade... 2599s The following packages will be upgraded: 2599s cloud-init cloud-init-base debianutils libmbim-glib4 libmbim-proxy 2599s libnftnl11 libpython3.13 libpython3.13-minimal libpython3.13-stdlib 2599s libqmi-glib5 libqmi-proxy libsepol2 python3-lazr.restfulclient python3.13 2599s python3.13-gdbm python3.13-minimal sos 2600s 17 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 2600s Need to get 11.1 MB of archives. 2600s After this operation, 96.3 kB disk space will be freed. 2600s Get:1 http://ftpmaster.internal/ubuntu questing/main amd64 debianutils amd64 5.22 [93.0 kB] 2600s Get:2 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 python3.13 amd64 3.13.3-2 [739 kB] 2600s Get:3 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 libpython3.13 amd64 3.13.3-2 [2342 kB] 2600s Get:4 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 libpython3.13-stdlib amd64 3.13.3-2 [2071 kB] 2600s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 python3.13-minimal amd64 3.13.3-2 [2372 kB] 2600s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 libpython3.13-minimal amd64 3.13.3-2 [884 kB] 2600s Get:7 http://ftpmaster.internal/ubuntu questing/main amd64 libsepol2 amd64 3.8.1-1 [327 kB] 2600s Get:8 http://ftpmaster.internal/ubuntu questing/main amd64 libnftnl11 amd64 1.2.9-1 [69.1 kB] 2600s Get:9 http://ftpmaster.internal/ubuntu questing/main amd64 cloud-init-base all 25.2~1g7a0265d3-0ubuntu1 [619 kB] 2600s Get:10 http://ftpmaster.internal/ubuntu questing/main amd64 libmbim-proxy amd64 1.32.0-1 [6276 B] 2600s Get:11 http://ftpmaster.internal/ubuntu questing/main amd64 libmbim-glib4 amd64 1.32.0-1 [233 kB] 2600s Get:12 http://ftpmaster.internal/ubuntu questing/main amd64 libqmi-proxy amd64 1.36.0-1 [6220 B] 2600s Get:13 http://ftpmaster.internal/ubuntu questing/main amd64 libqmi-glib5 amd64 1.36.0-1 [920 kB] 2600s Get:14 http://ftpmaster.internal/ubuntu questing/main amd64 python3-lazr.restfulclient all 0.14.6-3 [51.0 kB] 2600s Get:15 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 python3.13-gdbm amd64 3.13.3-2 [32.1 kB] 2600s Get:16 http://ftpmaster.internal/ubuntu questing/main amd64 sos all 4.9.1-1 [367 kB] 2600s Get:17 http://ftpmaster.internal/ubuntu questing/main amd64 cloud-init all 25.2~1g7a0265d3-0ubuntu1 [2106 B] 2601s Preconfiguring packages ... 2601s Fetched 11.1 MB in 1s (11.6 MB/s) 2601s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80514 files and directories currently installed.) 2601s Preparing to unpack .../debianutils_5.22_amd64.deb ... 2601s Unpacking debianutils (5.22) over (5.21) ... 2601s Setting up debianutils (5.22) ... 2602s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80514 files and directories currently installed.) 2602s Preparing to unpack .../0-python3.13_3.13.3-2_amd64.deb ... 2602s Unpacking python3.13 (3.13.3-2) over (3.13.3-1) ... 2602s Preparing to unpack .../1-libpython3.13_3.13.3-2_amd64.deb ... 2602s Unpacking libpython3.13:amd64 (3.13.3-2) over (3.13.3-1) ... 2602s Preparing to unpack .../2-libpython3.13-stdlib_3.13.3-2_amd64.deb ... 2602s Unpacking libpython3.13-stdlib:amd64 (3.13.3-2) over (3.13.3-1) ... 2602s Preparing to unpack .../3-python3.13-minimal_3.13.3-2_amd64.deb ... 2602s Unpacking python3.13-minimal (3.13.3-2) over (3.13.3-1) ... 2602s Preparing to unpack .../4-libpython3.13-minimal_3.13.3-2_amd64.deb ... 2602s Unpacking libpython3.13-minimal:amd64 (3.13.3-2) over (3.13.3-1) ... 2602s Preparing to unpack .../5-libsepol2_3.8.1-1_amd64.deb ... 2602s Unpacking libsepol2:amd64 (3.8.1-1) over (3.7-1) ... 2602s Setting up libsepol2:amd64 (3.8.1-1) ... 2602s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80514 files and directories currently installed.) 2602s Preparing to unpack .../0-libnftnl11_1.2.9-1_amd64.deb ... 2602s Unpacking libnftnl11:amd64 (1.2.9-1) over (1.2.8-1) ... 2602s Preparing to unpack .../1-cloud-init-base_25.2~1g7a0265d3-0ubuntu1_all.deb ... 2603s Unpacking cloud-init-base (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ... 2603s Preparing to unpack .../2-libmbim-proxy_1.32.0-1_amd64.deb ... 2603s Unpacking libmbim-proxy (1.32.0-1) over (1.31.2-0ubuntu4) ... 2603s Preparing to unpack .../3-libmbim-glib4_1.32.0-1_amd64.deb ... 2603s Unpacking libmbim-glib4:amd64 (1.32.0-1) over (1.31.2-0ubuntu4) ... 2603s Preparing to unpack .../4-libqmi-proxy_1.36.0-1_amd64.deb ... 2603s Unpacking libqmi-proxy (1.36.0-1) over (1.35.6-1) ... 2603s Preparing to unpack .../5-libqmi-glib5_1.36.0-1_amd64.deb ... 2603s Unpacking libqmi-glib5:amd64 (1.36.0-1) over (1.35.6-1) ... 2603s Preparing to unpack .../6-python3-lazr.restfulclient_0.14.6-3_all.deb ... 2604s Unpacking python3-lazr.restfulclient (0.14.6-3) over (0.14.6-2) ... 2604s Preparing to unpack .../7-python3.13-gdbm_3.13.3-2_amd64.deb ... 2604s Unpacking python3.13-gdbm (3.13.3-2) over (3.13.3-1) ... 2604s Preparing to unpack .../8-sos_4.9.1-1_all.deb ... 2604s Unpacking sos (4.9.1-1) over (4.9.0-6) ... 2604s Preparing to unpack .../9-cloud-init_25.2~1g7a0265d3-0ubuntu1_all.deb ... 2604s Unpacking cloud-init (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ... 2604s Setting up sos (4.9.1-1) ... 2605s Setting up libnftnl11:amd64 (1.2.9-1) ... 2605s Setting up cloud-init-base (25.2~1g7a0265d3-0ubuntu1) ... 2607s Setting up libpython3.13-minimal:amd64 (3.13.3-2) ... 2607s Setting up python3.13-minimal (3.13.3-2) ... 2608s Setting up python3-lazr.restfulclient (0.14.6-3) ... 2608s Setting up libpython3.13-stdlib:amd64 (3.13.3-2) ... 2608s Setting up libmbim-glib4:amd64 (1.32.0-1) ... 2608s Setting up python3.13-gdbm (3.13.3-2) ... 2608s Setting up libpython3.13:amd64 (3.13.3-2) ... 2608s Setting up cloud-init (25.2~1g7a0265d3-0ubuntu1) ... 2608s Setting up python3.13 (3.13.3-2) ... 2609s Setting up libmbim-proxy (1.32.0-1) ... 2609s Setting up libqmi-glib5:amd64 (1.36.0-1) ... 2609s Setting up libqmi-proxy (1.36.0-1) ... 2609s Processing triggers for man-db (2.13.0-1) ... 2611s Processing triggers for libc-bin (2.41-6ubuntu1) ... 2611s Processing triggers for rsyslog (8.2412.0-2ubuntu2) ... 2611s Processing triggers for systemd (257.4-1ubuntu3) ... 2612s Reading package lists... 2612s Building dependency tree... 2612s Reading state information... 2612s Starting pkgProblemResolver with broken count: 0 2613s Starting 2 pkgProblemResolver with broken count: 0 2613s Done 2613s Solving dependencies... 2613s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 2614s autopkgtest [19:46:50]: rebooting testbed after setup commands that affected boot 2636s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 2645s Reading package lists... 2646s Building dependency tree... 2646s Reading state information... 2646s Starting pkgProblemResolver with broken count: 0 2646s Starting 2 pkgProblemResolver with broken count: 0 2646s Done 2647s The following NEW packages will be installed: 2647s hwloc-nox libamd-comgr2 libamdhip64-5 libblas3 libevent-pthreads-2.1-7t64 2647s libfabric1 libgfortran5 libgomp1 libhsa-runtime64-1 libhsakmt1 2647s libhwloc-plugins libhwloc15 libibmad5 libibumad3 liblapack3 libllvm17t64 2647s libmpich12 libmunge2 libopenmpi40 libpciaccess0 libpmix2t64 2647s libpsm-infinipath1 libpsm2-2 librdmacm1t64 libscalapack-mpich2.2 2647s libslurm42t64 libucx0 libxnvctrl0 mpi-default-bin mpich nwchem-data 2647s nwchem-mpich ocl-icd-libopencl1 openmpi-bin openmpi-common 2647s 0 upgraded, 35 newly installed, 0 to remove and 0 not upgraded. 2647s Need to get 96.4 MB of archives. 2647s After this operation, 434 MB of additional disk space will be used. 2647s Get:1 http://ftpmaster.internal/ubuntu questing/universe amd64 libllvm17t64 amd64 1:17.0.6-21 [26.0 MB] 2648s Get:2 http://ftpmaster.internal/ubuntu questing/universe amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3build2 [14.4 MB] 2649s Get:3 http://ftpmaster.internal/ubuntu questing/universe amd64 libhsakmt1 amd64 5.7.0-1build1 [62.9 kB] 2649s Get:4 http://ftpmaster.internal/ubuntu questing/universe amd64 libhsa-runtime64-1 amd64 5.7.1-2build1 [491 kB] 2649s Get:5 http://ftpmaster.internal/ubuntu questing/universe amd64 libamdhip64-5 amd64 5.7.1-5.1 [9695 kB] 2649s Get:6 http://ftpmaster.internal/ubuntu questing/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 2649s Get:7 http://ftpmaster.internal/ubuntu questing/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10 [7966 B] 2649s Get:8 http://ftpmaster.internal/ubuntu questing/universe amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.4 [179 kB] 2649s Get:9 http://ftpmaster.internal/ubuntu questing/universe amd64 libpsm2-2 amd64 11.2.185-2.1 [193 kB] 2649s Get:10 http://ftpmaster.internal/ubuntu questing/main amd64 librdmacm1t64 amd64 56.0-4ubuntu1 [71.5 kB] 2649s Get:11 http://ftpmaster.internal/ubuntu questing/universe amd64 libfabric1 amd64 1.17.0-3.1 [789 kB] 2649s Get:12 http://ftpmaster.internal/ubuntu questing/main amd64 libgfortran5 amd64 15-20250404-0ubuntu1 [926 kB] 2649s Get:13 http://ftpmaster.internal/ubuntu questing/main amd64 libgomp1 amd64 15-20250404-0ubuntu1 [151 kB] 2649s Get:14 http://ftpmaster.internal/ubuntu questing/universe amd64 libhwloc15 amd64 2.12.0-1 [194 kB] 2649s Get:15 http://ftpmaster.internal/ubuntu questing/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 2649s Get:16 http://ftpmaster.internal/ubuntu questing/universe amd64 libmunge2 amd64 0.5.16-1 [16.5 kB] 2649s Get:17 http://ftpmaster.internal/ubuntu questing/main amd64 libpciaccess0 amd64 0.17-3build1 [18.6 kB] 2649s Get:18 http://ftpmaster.internal/ubuntu questing/main amd64 libxnvctrl0 amd64 510.47.03-0ubuntu4 [12.6 kB] 2649s Get:19 http://ftpmaster.internal/ubuntu questing/universe amd64 ocl-icd-libopencl1 amd64 2.3.2-1build1 [38.5 kB] 2649s Get:20 http://ftpmaster.internal/ubuntu questing/universe amd64 libhwloc-plugins amd64 2.12.0-1 [16.0 kB] 2649s Get:21 http://ftpmaster.internal/ubuntu questing/universe amd64 libpmix2t64 amd64 5.0.6-5 [714 kB] 2649s Get:22 http://ftpmaster.internal/ubuntu questing/main amd64 libibumad3 amd64 56.0-4ubuntu1 [31.2 kB] 2649s Get:23 http://ftpmaster.internal/ubuntu questing/main amd64 libibmad5 amd64 56.0-4ubuntu1 [43.9 kB] 2649s Get:24 http://ftpmaster.internal/ubuntu questing/universe amd64 libucx0 amd64 1.18.1+ds-2 [1293 kB] 2649s Get:25 http://ftpmaster.internal/ubuntu questing/universe amd64 libopenmpi40 amd64 5.0.7-1 [2526 kB] 2649s Get:26 http://ftpmaster.internal/ubuntu questing/universe amd64 openmpi-common all 5.0.7-1 [97.9 kB] 2649s Get:27 http://ftpmaster.internal/ubuntu questing/universe amd64 openmpi-bin amd64 5.0.7-1 [192 kB] 2649s Get:28 http://ftpmaster.internal/ubuntu questing/universe amd64 mpi-default-bin amd64 1.18 [2510 B] 2649s Get:29 http://ftpmaster.internal/ubuntu questing/universe amd64 libmpich12 amd64 4.2.1-5 [10.7 MB] 2650s Get:30 http://ftpmaster.internal/ubuntu questing/universe amd64 libscalapack-mpich2.2 amd64 2.2.2-1ubuntu1 [2063 kB] 2650s Get:31 http://ftpmaster.internal/ubuntu questing/universe amd64 libslurm42t64 amd64 24.11.3-2 [653 kB] 2650s Get:32 http://ftpmaster.internal/ubuntu questing/universe amd64 nwchem-data all 7.2.3-7build1 [6076 kB] 2650s Get:33 http://ftpmaster.internal/ubuntu questing/universe amd64 hwloc-nox amd64 2.12.0-1 [254 kB] 2650s Get:34 http://ftpmaster.internal/ubuntu questing/universe amd64 mpich amd64 4.2.1-5 [213 kB] 2650s Get:35 http://ftpmaster.internal/ubuntu questing/universe amd64 nwchem-mpich amd64 7.2.3-7build1 [14.8 MB] 2651s Fetched 96.4 MB in 3s (31.7 MB/s) 2651s Selecting previously unselected package libllvm17t64:amd64. 2651s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80518 files and directories currently installed.) 2651s Preparing to unpack .../00-libllvm17t64_1%3a17.0.6-21_amd64.deb ... 2651s Unpacking libllvm17t64:amd64 (1:17.0.6-21) ... 2652s Selecting previously unselected package libamd-comgr2:amd64. 2652s Preparing to unpack .../01-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3build2_amd64.deb ... 2652s Unpacking libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3build2) ... 2652s Selecting previously unselected package libhsakmt1:amd64. 2652s Preparing to unpack .../02-libhsakmt1_5.7.0-1build1_amd64.deb ... 2652s Unpacking libhsakmt1:amd64 (5.7.0-1build1) ... 2652s Selecting previously unselected package libhsa-runtime64-1. 2652s Preparing to unpack .../03-libhsa-runtime64-1_5.7.1-2build1_amd64.deb ... 2652s Unpacking libhsa-runtime64-1 (5.7.1-2build1) ... 2652s Selecting previously unselected package libamdhip64-5. 2652s Preparing to unpack .../04-libamdhip64-5_5.7.1-5.1_amd64.deb ... 2652s Unpacking libamdhip64-5 (5.7.1-5.1) ... 2652s Selecting previously unselected package libblas3:amd64. 2652s Preparing to unpack .../05-libblas3_3.12.1-2_amd64.deb ... 2652s Unpacking libblas3:amd64 (3.12.1-2) ... 2652s Selecting previously unselected package libevent-pthreads-2.1-7t64:amd64. 2652s Preparing to unpack .../06-libevent-pthreads-2.1-7t64_2.1.12-stable-10_amd64.deb ... 2652s Unpacking libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10) ... 2652s Selecting previously unselected package libpsm-infinipath1. 2652s Preparing to unpack .../07-libpsm-infinipath1_3.3+20.604758e7-6.4_amd64.deb ... 2652s Unpacking libpsm-infinipath1 (3.3+20.604758e7-6.4) ... 2652s Selecting previously unselected package libpsm2-2. 2652s Preparing to unpack .../08-libpsm2-2_11.2.185-2.1_amd64.deb ... 2652s Unpacking libpsm2-2 (11.2.185-2.1) ... 2652s Selecting previously unselected package librdmacm1t64:amd64. 2652s Preparing to unpack .../09-librdmacm1t64_56.0-4ubuntu1_amd64.deb ... 2652s Unpacking librdmacm1t64:amd64 (56.0-4ubuntu1) ... 2652s Selecting previously unselected package libfabric1:amd64. 2652s Preparing to unpack .../10-libfabric1_1.17.0-3.1_amd64.deb ... 2652s Unpacking libfabric1:amd64 (1.17.0-3.1) ... 2652s Selecting previously unselected package libgfortran5:amd64. 2652s Preparing to unpack .../11-libgfortran5_15-20250404-0ubuntu1_amd64.deb ... 2652s Unpacking libgfortran5:amd64 (15-20250404-0ubuntu1) ... 2653s Selecting previously unselected package libgomp1:amd64. 2653s Preparing to unpack .../12-libgomp1_15-20250404-0ubuntu1_amd64.deb ... 2653s Unpacking libgomp1:amd64 (15-20250404-0ubuntu1) ... 2653s Selecting previously unselected package libhwloc15:amd64. 2653s Preparing to unpack .../13-libhwloc15_2.12.0-1_amd64.deb ... 2653s Unpacking libhwloc15:amd64 (2.12.0-1) ... 2653s Selecting previously unselected package liblapack3:amd64. 2653s Preparing to unpack .../14-liblapack3_3.12.1-2_amd64.deb ... 2653s Unpacking liblapack3:amd64 (3.12.1-2) ... 2653s Selecting previously unselected package libmunge2:amd64. 2653s Preparing to unpack .../15-libmunge2_0.5.16-1_amd64.deb ... 2653s Unpacking libmunge2:amd64 (0.5.16-1) ... 2653s Selecting previously unselected package libpciaccess0:amd64. 2653s Preparing to unpack .../16-libpciaccess0_0.17-3build1_amd64.deb ... 2653s Unpacking libpciaccess0:amd64 (0.17-3build1) ... 2653s Selecting previously unselected package libxnvctrl0:amd64. 2653s Preparing to unpack .../17-libxnvctrl0_510.47.03-0ubuntu4_amd64.deb ... 2653s Unpacking libxnvctrl0:amd64 (510.47.03-0ubuntu4) ... 2653s Selecting previously unselected package ocl-icd-libopencl1:amd64. 2653s Preparing to unpack .../18-ocl-icd-libopencl1_2.3.2-1build1_amd64.deb ... 2653s Unpacking ocl-icd-libopencl1:amd64 (2.3.2-1build1) ... 2653s Selecting previously unselected package libhwloc-plugins:amd64. 2653s Preparing to unpack .../19-libhwloc-plugins_2.12.0-1_amd64.deb ... 2653s Unpacking libhwloc-plugins:amd64 (2.12.0-1) ... 2653s Selecting previously unselected package libpmix2t64:amd64. 2653s Preparing to unpack .../20-libpmix2t64_5.0.6-5_amd64.deb ... 2653s Unpacking libpmix2t64:amd64 (5.0.6-5) ... 2653s Selecting previously unselected package libibumad3:amd64. 2653s Preparing to unpack .../21-libibumad3_56.0-4ubuntu1_amd64.deb ... 2653s Unpacking libibumad3:amd64 (56.0-4ubuntu1) ... 2653s Selecting previously unselected package libibmad5:amd64. 2653s Preparing to unpack .../22-libibmad5_56.0-4ubuntu1_amd64.deb ... 2653s Unpacking libibmad5:amd64 (56.0-4ubuntu1) ... 2653s Selecting previously unselected package libucx0:amd64. 2653s Preparing to unpack .../23-libucx0_1.18.1+ds-2_amd64.deb ... 2653s Unpacking libucx0:amd64 (1.18.1+ds-2) ... 2653s Selecting previously unselected package libopenmpi40:amd64. 2653s Preparing to unpack .../24-libopenmpi40_5.0.7-1_amd64.deb ... 2653s Unpacking libopenmpi40:amd64 (5.0.7-1) ... 2653s Selecting previously unselected package openmpi-common. 2653s Preparing to unpack .../25-openmpi-common_5.0.7-1_all.deb ... 2653s Unpacking openmpi-common (5.0.7-1) ... 2653s Selecting previously unselected package openmpi-bin. 2653s Preparing to unpack .../26-openmpi-bin_5.0.7-1_amd64.deb ... 2653s Unpacking openmpi-bin (5.0.7-1) ... 2653s Selecting previously unselected package mpi-default-bin. 2653s Preparing to unpack .../27-mpi-default-bin_1.18_amd64.deb ... 2653s Unpacking mpi-default-bin (1.18) ... 2653s Selecting previously unselected package libmpich12:amd64. 2653s Preparing to unpack .../28-libmpich12_4.2.1-5_amd64.deb ... 2653s Unpacking libmpich12:amd64 (4.2.1-5) ... 2654s Selecting previously unselected package libscalapack-mpich2.2:amd64. 2654s Preparing to unpack .../29-libscalapack-mpich2.2_2.2.2-1ubuntu1_amd64.deb ... 2654s Unpacking libscalapack-mpich2.2:amd64 (2.2.2-1ubuntu1) ... 2654s Selecting previously unselected package libslurm42t64. 2654s Preparing to unpack .../30-libslurm42t64_24.11.3-2_amd64.deb ... 2654s Unpacking libslurm42t64 (24.11.3-2) ... 2654s Selecting previously unselected package nwchem-data. 2654s Preparing to unpack .../31-nwchem-data_7.2.3-7build1_all.deb ... 2654s Unpacking nwchem-data (7.2.3-7build1) ... 2654s Selecting previously unselected package hwloc-nox. 2654s Preparing to unpack .../32-hwloc-nox_2.12.0-1_amd64.deb ... 2654s Unpacking hwloc-nox (2.12.0-1) ... 2654s Selecting previously unselected package mpich. 2654s Preparing to unpack .../33-mpich_4.2.1-5_amd64.deb ... 2654s Unpacking mpich (4.2.1-5) ... 2654s Selecting previously unselected package nwchem-mpich. 2654s Preparing to unpack .../34-nwchem-mpich_7.2.3-7build1_amd64.deb ... 2654s Unpacking nwchem-mpich (7.2.3-7build1) ... 2655s Setting up libpciaccess0:amd64 (0.17-3build1) ... 2655s Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10) ... 2655s Setting up nwchem-data (7.2.3-7build1) ... 2655s Setting up libibumad3:amd64 (56.0-4ubuntu1) ... 2655s Setting up libibmad5:amd64 (56.0-4ubuntu1) ... 2655s Setting up libgomp1:amd64 (15-20250404-0ubuntu1) ... 2655s Setting up libxnvctrl0:amd64 (510.47.03-0ubuntu4) ... 2655s Setting up libblas3:amd64 (3.12.1-2) ... 2655s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 2655s Setting up libmunge2:amd64 (0.5.16-1) ... 2655s Setting up libllvm17t64:amd64 (1:17.0.6-21) ... 2655s Setting up libslurm42t64 (24.11.3-2) ... 2655s Setting up libhwloc15:amd64 (2.12.0-1) ... 2655s Setting up libgfortran5:amd64 (15-20250404-0ubuntu1) ... 2655s Setting up ocl-icd-libopencl1:amd64 (2.3.2-1build1) ... 2655s Setting up libpsm2-2 (11.2.185-2.1) ... 2655s Setting up openmpi-common (5.0.7-1) ... 2655s Setting up librdmacm1t64:amd64 (56.0-4ubuntu1) ... 2655s Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3build2) ... 2655s Setting up libpsm-infinipath1 (3.3+20.604758e7-6.4) ... 2655s update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode 2655s Setting up libhsakmt1:amd64 (5.7.0-1build1) ... 2655s Setting up libfabric1:amd64 (1.17.0-3.1) ... 2655s Setting up liblapack3:amd64 (3.12.1-2) ... 2655s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 2655s Setting up hwloc-nox (2.12.0-1) ... 2655s Setting up libhwloc-plugins:amd64 (2.12.0-1) ... 2655s Setting up libpmix2t64:amd64 (5.0.6-5) ... 2655s Setting up libhsa-runtime64-1 (5.7.1-2build1) ... 2655s Setting up libamdhip64-5 (5.7.1-5.1) ... 2655s Setting up libucx0:amd64 (1.18.1+ds-2) ... 2655s Setting up libmpich12:amd64 (4.2.1-5) ... 2655s Setting up libopenmpi40:amd64 (5.0.7-1) ... 2655s Setting up mpich (4.2.1-5) ... 2655s update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode 2655s update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode 2655s Setting up openmpi-bin (5.0.7-1) ... 2655s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 2655s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 2655s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 2655s Setting up mpi-default-bin (1.18) ... 2655s Setting up libscalapack-mpich2.2:amd64 (2.2.2-1ubuntu1) ... 2655s Setting up nwchem-mpich (7.2.3-7build1) ... 2655s Processing triggers for libc-bin (2.41-6ubuntu1) ... 2655s Processing triggers for man-db (2.13.0-1) ... 3560s autopkgtest-virt-ssh [20:02:36]: copydown destination failed, status 255 3564s autopkgtest-virt-ssh [20:02:40]: ------- nova console-log 97cf9531-0731-4e61-aa7f-9956798e9a43 (adt-questing-amd64-nwchem-20250503-173532-juju-7f2275-prod-proposed-migration-environment-21-d895b04e-861c-4c00-a719-aec5da213e2d) ------ 3564s ERROR (CommandError): No server with a name or ID of '97cf9531-0731-4e61-aa7f-9956798e9a43' exists. 3564s --------------------------------------------------- 3564s ------- nova show 97cf9531-0731-4e61-aa7f-9956798e9a43 (adt-questing-amd64-nwchem-20250503-173532-juju-7f2275-prod-proposed-migration-environment-21-d895b04e-861c-4c00-a719-aec5da213e2d) ------ 3564s ERROR (CommandError): No server with a name or ID of '97cf9531-0731-4e61-aa7f-9956798e9a43' exists. 3564s --------------------------------------------------- 3564s 3569s nova [W] Skipping flock for amd64 3569s Creating nova instance adt-questing-amd64-nwchem-20250503-173532-juju-7f2275-prod-proposed-migration-environment-21-d895b04e-861c-4c00-a719-aec5da213e2d from image adt/ubuntu-questing-amd64-server-20250503.img (UUID 57b7c1b6-ad80-4bdb-b031-36f045f7f3b3)... 3569s nova [W] Timed out waiting for 400d9db0-76a9-4d2d-940e-b85e5b1700aa to get deleted. 3569s nova [W] Skipping flock for amd64 3569s Creating nova instance adt-questing-amd64-nwchem-20250503-173532-juju-7f2275-prod-proposed-migration-environment-21-d895b04e-861c-4c00-a719-aec5da213e2d from image adt/ubuntu-questing-amd64-server-20250503.img (UUID 57b7c1b6-ad80-4bdb-b031-36f045f7f3b3)... 3569s nova [W] nova quota exceeded (attempt #0) 3569s nova [W] nova quota exceeded (attempt #1) 3569s nova [W] Timed out waiting for fbc37efd-96b9-4afc-bdbe-f3824e2cd71d to get deleted. 3569s nova [W] Skipping flock for amd64 3569s Creating nova instance adt-questing-amd64-nwchem-20250503-173532-juju-7f2275-prod-proposed-migration-environment-21-d895b04e-861c-4c00-a719-aec5da213e2d from image adt/ubuntu-questing-amd64-server-20250503.img (UUID 57b7c1b6-ad80-4bdb-b031-36f045f7f3b3)... 3569s nova [W] Timed out waiting for 97cf9531-0731-4e61-aa7f-9956798e9a43 to get deleted. 3569s autopkgtest [20:02:45]: ERROR: testbed failure: sent `auxverb_debug_fail', got `copy-failed', expected `ok...'