0s autopkgtest [18:46:35]: starting date and time: 2025-05-03 18:46:35+0000 0s autopkgtest [18:46:35]: git checkout: 9986aa8c Merge branch 'skia/fix_network_interface' into 'ubuntu/production' 0s autopkgtest [18:46:35]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.y78xkjuh/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:mpich --apt-upgrade nwchem --timeout-short=300 --timeout-copy=20000 --timeout-test=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=mpich/4.3.0-5 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu4-ram8-disk100 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-16.secgroup --name adt-questing-amd64-nwchem-20250503-184635-juju-7f2275-prod-proposed-migration-environment-20-359b6746-b870-43fc-9ac5-d009cc585fdd --image adt/ubuntu-questing-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 88s autopkgtest [18:48:03]: testbed dpkg architecture: amd64 89s autopkgtest [18:48:04]: testbed apt version: 3.0.0 89s autopkgtest [18:48:04]: @@@@@@@@@@@@@@@@@@@@ test bed setup 89s autopkgtest [18:48:04]: testbed release detected to be: None 90s autopkgtest [18:48:05]: updating testbed package index (apt update) 90s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB] 91s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 91s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 91s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 91s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [149 kB] 91s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [1442 kB] 91s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [33.7 kB] 91s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main i386 Packages [146 kB] 91s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 Packages [203 kB] 91s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/universe amd64 Packages [1424 kB] 91s Get:11 http://ftpmaster.internal/ubuntu questing-proposed/universe i386 Packages [576 kB] 91s Get:12 http://ftpmaster.internal/ubuntu questing-proposed/multiverse amd64 Packages [48.6 kB] 91s Get:13 http://ftpmaster.internal/ubuntu questing-proposed/multiverse i386 Packages [23.1 kB] 91s Fetched 4155 kB in 1s (3855 kB/s) 92s Reading package lists... 93s autopkgtest [18:48:08]: upgrading testbed (apt dist-upgrade and autopurge) 93s Reading package lists... 93s Building dependency tree... 93s Reading state information... 94s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 94s Starting 2 pkgProblemResolver with broken count: 0 94s Done 94s Entering ResolveByKeep 95s 95s Calculating upgrade... 95s The following packages will be upgraded: 95s cloud-init cloud-init-base debianutils libmbim-glib4 libmbim-proxy 95s libnftnl11 libqmi-glib5 libqmi-proxy libsepol2 python3-lazr.restfulclient 95s sos 95s 11 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 95s Need to get 2693 kB of archives. 95s After this operation, 104 kB disk space will be freed. 95s Get:1 http://ftpmaster.internal/ubuntu questing/main amd64 debianutils amd64 5.22 [93.0 kB] 95s Get:2 http://ftpmaster.internal/ubuntu questing/main amd64 libsepol2 amd64 3.8.1-1 [327 kB] 95s Get:3 http://ftpmaster.internal/ubuntu questing/main amd64 libnftnl11 amd64 1.2.9-1 [69.1 kB] 95s Get:4 http://ftpmaster.internal/ubuntu questing/main amd64 cloud-init-base all 25.2~1g7a0265d3-0ubuntu1 [619 kB] 96s Get:5 http://ftpmaster.internal/ubuntu questing/main amd64 libmbim-proxy amd64 1.32.0-1 [6276 B] 96s Get:6 http://ftpmaster.internal/ubuntu questing/main amd64 libmbim-glib4 amd64 1.32.0-1 [233 kB] 96s Get:7 http://ftpmaster.internal/ubuntu questing/main amd64 libqmi-proxy amd64 1.36.0-1 [6220 B] 96s Get:8 http://ftpmaster.internal/ubuntu questing/main amd64 libqmi-glib5 amd64 1.36.0-1 [920 kB] 96s Get:9 http://ftpmaster.internal/ubuntu questing/main amd64 python3-lazr.restfulclient all 0.14.6-3 [51.0 kB] 96s Get:10 http://ftpmaster.internal/ubuntu questing/main amd64 sos all 4.9.1-1 [367 kB] 97s Get:11 http://ftpmaster.internal/ubuntu questing/main amd64 cloud-init all 25.2~1g7a0265d3-0ubuntu1 [2106 B] 97s Preconfiguring packages ... 97s Fetched 2693 kB in 2s (1577 kB/s) 97s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80514 files and directories currently installed.) 97s Preparing to unpack .../debianutils_5.22_amd64.deb ... 97s Unpacking debianutils (5.22) over (5.21) ... 97s Setting up debianutils (5.22) ... 97s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80514 files and directories currently installed.) 97s Preparing to unpack .../libsepol2_3.8.1-1_amd64.deb ... 97s Unpacking libsepol2:amd64 (3.8.1-1) over (3.7-1) ... 98s Setting up libsepol2:amd64 (3.8.1-1) ... 98s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80514 files and directories currently installed.) 98s Preparing to unpack .../0-libnftnl11_1.2.9-1_amd64.deb ... 98s Unpacking libnftnl11:amd64 (1.2.9-1) over (1.2.8-1) ... 98s Preparing to unpack .../1-cloud-init-base_25.2~1g7a0265d3-0ubuntu1_all.deb ... 98s Unpacking cloud-init-base (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ... 98s Preparing to unpack .../2-libmbim-proxy_1.32.0-1_amd64.deb ... 98s Unpacking libmbim-proxy (1.32.0-1) over (1.31.2-0ubuntu4) ... 98s Preparing to unpack .../3-libmbim-glib4_1.32.0-1_amd64.deb ... 98s Unpacking libmbim-glib4:amd64 (1.32.0-1) over (1.31.2-0ubuntu4) ... 98s Preparing to unpack .../4-libqmi-proxy_1.36.0-1_amd64.deb ... 98s Unpacking libqmi-proxy (1.36.0-1) over (1.35.6-1) ... 98s Preparing to unpack .../5-libqmi-glib5_1.36.0-1_amd64.deb ... 98s Unpacking libqmi-glib5:amd64 (1.36.0-1) over (1.35.6-1) ... 98s Preparing to unpack .../6-python3-lazr.restfulclient_0.14.6-3_all.deb ... 98s Unpacking python3-lazr.restfulclient (0.14.6-3) over (0.14.6-2) ... 98s Preparing to unpack .../7-sos_4.9.1-1_all.deb ... 99s Unpacking sos (4.9.1-1) over (4.9.0-6) ... 99s Preparing to unpack .../8-cloud-init_25.2~1g7a0265d3-0ubuntu1_all.deb ... 99s Unpacking cloud-init (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ... 99s Setting up sos (4.9.1-1) ... 99s Setting up libnftnl11:amd64 (1.2.9-1) ... 99s Setting up cloud-init-base (25.2~1g7a0265d3-0ubuntu1) ... 101s Setting up python3-lazr.restfulclient (0.14.6-3) ... 101s Setting up libmbim-glib4:amd64 (1.32.0-1) ... 101s Setting up cloud-init (25.2~1g7a0265d3-0ubuntu1) ... 101s Setting up libmbim-proxy (1.32.0-1) ... 101s Setting up libqmi-glib5:amd64 (1.36.0-1) ... 101s Setting up libqmi-proxy (1.36.0-1) ... 101s Processing triggers for libc-bin (2.41-6ubuntu1) ... 101s Processing triggers for rsyslog (8.2412.0-2ubuntu2) ... 101s Processing triggers for man-db (2.13.0-1) ... 103s Reading package lists... 103s Building dependency tree... 103s Reading state information... 103s Starting pkgProblemResolver with broken count: 0 104s Starting 2 pkgProblemResolver with broken count: 0 104s Done 104s Solving dependencies... 104s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 104s autopkgtest [18:48:19]: rebooting testbed after setup commands that affected boot 117s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 124s autopkgtest [18:48:39]: testbed running kernel: Linux 6.14.0-15-generic #15-Ubuntu SMP PREEMPT_DYNAMIC Sun Apr 6 15:05:05 UTC 2025 126s autopkgtest [18:48:41]: @@@@@@@@@@@@@@@@@@@@ apt-source nwchem 138s Get:1 http://ftpmaster.internal/ubuntu questing/universe nwchem 7.2.3-7build1 (dsc) [2834 B] 138s Get:2 http://ftpmaster.internal/ubuntu questing/universe nwchem 7.2.3-7build1 (tar) [168 MB] 138s Get:3 http://ftpmaster.internal/ubuntu questing/universe nwchem 7.2.3-7build1 (diff) [560 kB] 138s gpgv: Signature made Fri Jan 3 11:06:21 2025 UTC 138s gpgv: using RSA key 568BF22A66337CBFC9A6B9B72C83DBC8E9BD0E37 138s gpgv: Can't check signature: No public key 138s dpkg-source: warning: cannot verify inline signature for ./nwchem_7.2.3-7build1.dsc: no acceptable signature found 184s autopkgtest [18:49:39]: testing package nwchem version 7.2.3-7build1 185s autopkgtest [18:49:40]: build not needed 233s autopkgtest [18:50:28]: test testsuite.sh: preparing testbed 234s Reading package lists... 234s Building dependency tree... 234s Reading state information... 234s Starting pkgProblemResolver with broken count: 0 234s Starting 2 pkgProblemResolver with broken count: 0 234s Done 234s The following NEW packages will be installed: 234s libamd-comgr2 libamdhip64-5 libblas3 libevent-pthreads-2.1-7t64 libfabric1 234s libgfortran5 libgomp1 libhsa-runtime64-1 libhsakmt1 libhwloc-plugins 234s libhwloc15 libibmad5 libibumad3 liblapack3 libllvm17t64 libmunge2 234s libopenmpi40 libpciaccess0 libpmix2t64 libpsm-infinipath1 libpsm2-2 234s librdmacm1t64 libscalapack-openmpi2.2 libucx0 libxnvctrl0 mpi-default-bin 234s nwchem nwchem-data nwchem-openmpi ocl-icd-libopencl1 openmpi-bin 234s openmpi-common 235s 0 upgraded, 32 newly installed, 0 to remove and 0 not upgraded. 235s Need to get 84.6 MB of archives. 235s After this operation, 378 MB of additional disk space will be used. 235s Get:1 http://ftpmaster.internal/ubuntu questing/universe amd64 libllvm17t64 amd64 1:17.0.6-21 [26.0 MB] 236s Get:2 http://ftpmaster.internal/ubuntu questing/universe amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3build2 [14.4 MB] 236s Get:3 http://ftpmaster.internal/ubuntu questing/universe amd64 libhsakmt1 amd64 5.7.0-1build1 [62.9 kB] 236s Get:4 http://ftpmaster.internal/ubuntu questing/universe amd64 libhsa-runtime64-1 amd64 5.7.1-2build1 [491 kB] 236s Get:5 http://ftpmaster.internal/ubuntu questing/universe amd64 libamdhip64-5 amd64 5.7.1-5.1 [9695 kB] 236s Get:6 http://ftpmaster.internal/ubuntu questing/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 236s Get:7 http://ftpmaster.internal/ubuntu questing/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10 [7966 B] 236s Get:8 http://ftpmaster.internal/ubuntu questing/universe amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.4 [179 kB] 236s Get:9 http://ftpmaster.internal/ubuntu questing/universe amd64 libpsm2-2 amd64 11.2.185-2.1 [193 kB] 236s Get:10 http://ftpmaster.internal/ubuntu questing/main amd64 librdmacm1t64 amd64 56.0-4ubuntu1 [71.5 kB] 236s Get:11 http://ftpmaster.internal/ubuntu questing/universe amd64 libfabric1 amd64 1.17.0-3.1 [789 kB] 237s Get:12 http://ftpmaster.internal/ubuntu questing/main amd64 libgfortran5 amd64 15-20250404-0ubuntu1 [926 kB] 237s Get:13 http://ftpmaster.internal/ubuntu questing/main amd64 libgomp1 amd64 15-20250404-0ubuntu1 [151 kB] 237s Get:14 http://ftpmaster.internal/ubuntu questing/universe amd64 libhwloc15 amd64 2.12.0-1 [194 kB] 237s Get:15 http://ftpmaster.internal/ubuntu questing/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 237s Get:16 http://ftpmaster.internal/ubuntu questing/universe amd64 libmunge2 amd64 0.5.16-1 [16.5 kB] 237s Get:17 http://ftpmaster.internal/ubuntu questing/main amd64 libpciaccess0 amd64 0.17-3build1 [18.6 kB] 237s Get:18 http://ftpmaster.internal/ubuntu questing/main amd64 libxnvctrl0 amd64 510.47.03-0ubuntu4 [12.6 kB] 237s Get:19 http://ftpmaster.internal/ubuntu questing/universe amd64 ocl-icd-libopencl1 amd64 2.3.2-1build1 [38.5 kB] 237s Get:20 http://ftpmaster.internal/ubuntu questing/universe amd64 libhwloc-plugins amd64 2.12.0-1 [16.0 kB] 237s Get:21 http://ftpmaster.internal/ubuntu questing/universe amd64 libpmix2t64 amd64 5.0.6-5 [714 kB] 237s Get:22 http://ftpmaster.internal/ubuntu questing/main amd64 libibumad3 amd64 56.0-4ubuntu1 [31.2 kB] 237s Get:23 http://ftpmaster.internal/ubuntu questing/main amd64 libibmad5 amd64 56.0-4ubuntu1 [43.9 kB] 237s Get:24 http://ftpmaster.internal/ubuntu questing/universe amd64 libucx0 amd64 1.18.1+ds-2 [1293 kB] 237s Get:25 http://ftpmaster.internal/ubuntu questing/universe amd64 libopenmpi40 amd64 5.0.7-1 [2526 kB] 237s Get:26 http://ftpmaster.internal/ubuntu questing/universe amd64 openmpi-common all 5.0.7-1 [97.9 kB] 237s Get:27 http://ftpmaster.internal/ubuntu questing/universe amd64 openmpi-bin amd64 5.0.7-1 [192 kB] 237s Get:28 http://ftpmaster.internal/ubuntu questing/universe amd64 mpi-default-bin amd64 1.18 [2510 B] 237s Get:29 http://ftpmaster.internal/ubuntu questing/universe amd64 libscalapack-openmpi2.2 amd64 2.2.2-1ubuntu1 [2073 kB] 237s Get:30 http://ftpmaster.internal/ubuntu questing/universe amd64 nwchem-data all 7.2.3-7build1 [6076 kB] 237s Get:31 http://ftpmaster.internal/ubuntu questing/universe amd64 nwchem-openmpi amd64 7.2.3-7build1 [14.8 MB] 237s Get:32 http://ftpmaster.internal/ubuntu questing/universe amd64 nwchem all 7.2.3-7build1 [17.9 kB] 238s Fetched 84.6 MB in 3s (30.5 MB/s) 238s Selecting previously unselected package libllvm17t64:amd64. 238s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80518 files and directories currently installed.) 238s Preparing to unpack .../00-libllvm17t64_1%3a17.0.6-21_amd64.deb ... 238s Unpacking libllvm17t64:amd64 (1:17.0.6-21) ... 238s Selecting previously unselected package libamd-comgr2:amd64. 238s Preparing to unpack .../01-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3build2_amd64.deb ... 238s Unpacking libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3build2) ... 239s Selecting previously unselected package libhsakmt1:amd64. 239s Preparing to unpack .../02-libhsakmt1_5.7.0-1build1_amd64.deb ... 239s Unpacking libhsakmt1:amd64 (5.7.0-1build1) ... 239s Selecting previously unselected package libhsa-runtime64-1. 239s Preparing to unpack .../03-libhsa-runtime64-1_5.7.1-2build1_amd64.deb ... 239s Unpacking libhsa-runtime64-1 (5.7.1-2build1) ... 239s Selecting previously unselected package libamdhip64-5. 239s Preparing to unpack .../04-libamdhip64-5_5.7.1-5.1_amd64.deb ... 239s Unpacking libamdhip64-5 (5.7.1-5.1) ... 239s Selecting previously unselected package libblas3:amd64. 239s Preparing to unpack .../05-libblas3_3.12.1-2_amd64.deb ... 239s Unpacking libblas3:amd64 (3.12.1-2) ... 239s Selecting previously unselected package libevent-pthreads-2.1-7t64:amd64. 239s Preparing to unpack .../06-libevent-pthreads-2.1-7t64_2.1.12-stable-10_amd64.deb ... 239s Unpacking libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10) ... 239s Selecting previously unselected package libpsm-infinipath1. 239s Preparing to unpack .../07-libpsm-infinipath1_3.3+20.604758e7-6.4_amd64.deb ... 239s Unpacking libpsm-infinipath1 (3.3+20.604758e7-6.4) ... 239s Selecting previously unselected package libpsm2-2. 239s Preparing to unpack .../08-libpsm2-2_11.2.185-2.1_amd64.deb ... 239s Unpacking libpsm2-2 (11.2.185-2.1) ... 239s Selecting previously unselected package librdmacm1t64:amd64. 239s Preparing to unpack .../09-librdmacm1t64_56.0-4ubuntu1_amd64.deb ... 239s Unpacking librdmacm1t64:amd64 (56.0-4ubuntu1) ... 239s Selecting previously unselected package libfabric1:amd64. 239s Preparing to unpack .../10-libfabric1_1.17.0-3.1_amd64.deb ... 239s Unpacking libfabric1:amd64 (1.17.0-3.1) ... 239s Selecting previously unselected package libgfortran5:amd64. 239s Preparing to unpack .../11-libgfortran5_15-20250404-0ubuntu1_amd64.deb ... 239s Unpacking libgfortran5:amd64 (15-20250404-0ubuntu1) ... 239s Selecting previously unselected package libgomp1:amd64. 239s Preparing to unpack .../12-libgomp1_15-20250404-0ubuntu1_amd64.deb ... 239s Unpacking libgomp1:amd64 (15-20250404-0ubuntu1) ... 239s Selecting previously unselected package libhwloc15:amd64. 239s Preparing to unpack .../13-libhwloc15_2.12.0-1_amd64.deb ... 239s Unpacking libhwloc15:amd64 (2.12.0-1) ... 239s Selecting previously unselected package liblapack3:amd64. 239s Preparing to unpack .../14-liblapack3_3.12.1-2_amd64.deb ... 239s Unpacking liblapack3:amd64 (3.12.1-2) ... 239s Selecting previously unselected package libmunge2:amd64. 239s Preparing to unpack .../15-libmunge2_0.5.16-1_amd64.deb ... 239s Unpacking libmunge2:amd64 (0.5.16-1) ... 239s Selecting previously unselected package libpciaccess0:amd64. 239s Preparing to unpack .../16-libpciaccess0_0.17-3build1_amd64.deb ... 239s Unpacking libpciaccess0:amd64 (0.17-3build1) ... 239s Selecting previously unselected package libxnvctrl0:amd64. 239s Preparing to unpack .../17-libxnvctrl0_510.47.03-0ubuntu4_amd64.deb ... 239s Unpacking libxnvctrl0:amd64 (510.47.03-0ubuntu4) ... 239s Selecting previously unselected package ocl-icd-libopencl1:amd64. 239s Preparing to unpack .../18-ocl-icd-libopencl1_2.3.2-1build1_amd64.deb ... 239s Unpacking ocl-icd-libopencl1:amd64 (2.3.2-1build1) ... 239s Selecting previously unselected package libhwloc-plugins:amd64. 239s Preparing to unpack .../19-libhwloc-plugins_2.12.0-1_amd64.deb ... 239s Unpacking libhwloc-plugins:amd64 (2.12.0-1) ... 239s Selecting previously unselected package libpmix2t64:amd64. 239s Preparing to unpack .../20-libpmix2t64_5.0.6-5_amd64.deb ... 239s Unpacking libpmix2t64:amd64 (5.0.6-5) ... 239s Selecting previously unselected package libibumad3:amd64. 239s Preparing to unpack .../21-libibumad3_56.0-4ubuntu1_amd64.deb ... 239s Unpacking libibumad3:amd64 (56.0-4ubuntu1) ... 239s Selecting previously unselected package libibmad5:amd64. 239s Preparing to unpack .../22-libibmad5_56.0-4ubuntu1_amd64.deb ... 239s Unpacking libibmad5:amd64 (56.0-4ubuntu1) ... 239s Selecting previously unselected package libucx0:amd64. 239s Preparing to unpack .../23-libucx0_1.18.1+ds-2_amd64.deb ... 239s Unpacking libucx0:amd64 (1.18.1+ds-2) ... 239s Selecting previously unselected package libopenmpi40:amd64. 239s Preparing to unpack .../24-libopenmpi40_5.0.7-1_amd64.deb ... 239s Unpacking libopenmpi40:amd64 (5.0.7-1) ... 240s Selecting previously unselected package openmpi-common. 240s Preparing to unpack .../25-openmpi-common_5.0.7-1_all.deb ... 240s Unpacking openmpi-common (5.0.7-1) ... 240s Selecting previously unselected package openmpi-bin. 240s Preparing to unpack .../26-openmpi-bin_5.0.7-1_amd64.deb ... 240s Unpacking openmpi-bin (5.0.7-1) ... 240s Selecting previously unselected package mpi-default-bin. 240s Preparing to unpack .../27-mpi-default-bin_1.18_amd64.deb ... 240s Unpacking mpi-default-bin (1.18) ... 240s Selecting previously unselected package libscalapack-openmpi2.2:amd64. 240s Preparing to unpack .../28-libscalapack-openmpi2.2_2.2.2-1ubuntu1_amd64.deb ... 240s Unpacking libscalapack-openmpi2.2:amd64 (2.2.2-1ubuntu1) ... 240s Selecting previously unselected package nwchem-data. 240s Preparing to unpack .../29-nwchem-data_7.2.3-7build1_all.deb ... 240s Unpacking nwchem-data (7.2.3-7build1) ... 240s Selecting previously unselected package nwchem-openmpi. 240s Preparing to unpack .../30-nwchem-openmpi_7.2.3-7build1_amd64.deb ... 240s Unpacking nwchem-openmpi (7.2.3-7build1) ... 240s Selecting previously unselected package nwchem. 240s Preparing to unpack .../31-nwchem_7.2.3-7build1_all.deb ... 240s Unpacking nwchem (7.2.3-7build1) ... 240s Setting up libpciaccess0:amd64 (0.17-3build1) ... 240s Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10) ... 240s Setting up nwchem-data (7.2.3-7build1) ... 240s Setting up libibumad3:amd64 (56.0-4ubuntu1) ... 240s Setting up libibmad5:amd64 (56.0-4ubuntu1) ... 240s Setting up libgomp1:amd64 (15-20250404-0ubuntu1) ... 240s Setting up libxnvctrl0:amd64 (510.47.03-0ubuntu4) ... 240s Setting up libblas3:amd64 (3.12.1-2) ... 240s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 240s Setting up libmunge2:amd64 (0.5.16-1) ... 240s Setting up libllvm17t64:amd64 (1:17.0.6-21) ... 240s Setting up libhwloc15:amd64 (2.12.0-1) ... 240s Setting up libgfortran5:amd64 (15-20250404-0ubuntu1) ... 240s Setting up ocl-icd-libopencl1:amd64 (2.3.2-1build1) ... 240s Setting up libpsm2-2 (11.2.185-2.1) ... 240s Setting up openmpi-common (5.0.7-1) ... 240s Setting up librdmacm1t64:amd64 (56.0-4ubuntu1) ... 240s Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3build2) ... 240s Setting up libpsm-infinipath1 (3.3+20.604758e7-6.4) ... 240s update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode 240s Setting up libhsakmt1:amd64 (5.7.0-1build1) ... 240s Setting up libfabric1:amd64 (1.17.0-3.1) ... 240s Setting up liblapack3:amd64 (3.12.1-2) ... 240s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 240s Setting up libhwloc-plugins:amd64 (2.12.0-1) ... 240s Setting up libpmix2t64:amd64 (5.0.6-5) ... 240s Setting up libhsa-runtime64-1 (5.7.1-2build1) ... 240s Setting up libamdhip64-5 (5.7.1-5.1) ... 240s Setting up libucx0:amd64 (1.18.1+ds-2) ... 240s Setting up libopenmpi40:amd64 (5.0.7-1) ... 240s Setting up openmpi-bin (5.0.7-1) ... 240s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 240s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 240s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 240s Setting up mpi-default-bin (1.18) ... 240s Setting up libscalapack-openmpi2.2:amd64 (2.2.2-1ubuntu1) ... 240s Setting up nwchem-openmpi (7.2.3-7build1) ... 240s Setting up nwchem (7.2.3-7build1) ... 240s Processing triggers for man-db (2.13.0-1) ... 241s Processing triggers for libc-bin (2.41-6ubuntu1) ... 242s autopkgtest [18:50:37]: test testsuite.sh: [----------------------- 242s ===== TESTING NWCHEM WITH DEFAULT MPI INSTALLATION ===== 242s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 242s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 242s 242s 242s Running tests/dft_he2+/dft_he2+ 242s 242s cleaning scratch 242s copying input and verified output files 242s running nwchem (/usr/bin/nwchem) with 1 processors 242s 253s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 253s OK 253s 253s Running tests/qmmm_grad0/qmmm_grad0 253s 253s cleaning scratch 253s copying input and verified output files 253s running nwchem (/usr/bin/nwchem) with 1 processors 253s 258s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 258s OK 258s 258s Running tests/auh2o/auh2o 258s 258s cleaning scratch 258s copying input and verified output files 258s running nwchem (/usr/bin/nwchem) with 1 processors 258s 260s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 260s OK 260s 260s Running tests/autosym/autosym 260s 260s cleaning scratch 260s copying input and verified output files 260s running nwchem (/usr/bin/nwchem) with 1 processors 260s 270s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 270s OK 270s 270s Running tests/h2mp2/h2mp2 270s 270s cleaning scratch 270s copying input and verified output files 270s running nwchem (/usr/bin/nwchem) with 1 processors 270s 273s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 273s OK 273s 273s Running tests/h2o/h2o 273s 273s cleaning scratch 273s copying input and verified output files 273s running nwchem (/usr/bin/nwchem) with 1 processors 273s 274s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 274s OK 274s 274s Running tests/hess_h2o/hess_h2o 274s 274s cleaning scratch 274s copying input and verified output files 274s running nwchem (/usr/bin/nwchem) with 1 processors 274s 280s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 280s OK 280s 280s Running tests/prop_h2o/prop_h2o 280s 280s cleaning scratch 280s copying input and verified output files 280s running nwchem (/usr/bin/nwchem) with 1 processors 280s 283s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 283s OK 283s 283s Running tests/geom_zmatrix/geom_zmatrix 283s 283s cleaning scratch 283s copying input and verified output files 283s running nwchem (/usr/bin/nwchem) with 1 processors 283s 286s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 286s OK 286s 286s Running tests/rimp2_ne/rimp2_ne 286s 286s cleaning scratch 286s copying input and verified output files 286s running nwchem (/usr/bin/nwchem) with 1 processors 286s 290s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 290s OK 290s 290s Running tests/small_intchk/small_intchk 290s 290s cleaning scratch 290s copying input and verified output files 290s running nwchem (/usr/bin/nwchem) with 1 processors 290s 298s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 298s OK 298s 298s Running tests/tagcheck/tagcheck 298s 298s cleaning scratch 298s copying input and verified output files 298s running nwchem (/usr/bin/nwchem) with 1 processors 298s 301s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 301s OK 301s 301s Running tests/testtab/testtab 301s 301s cleaning scratch 301s copying input and verified output files 301s running nwchem (/usr/bin/nwchem) with 1 processors 301s 302s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 302s OK 302s 302s Running tests/h2o_dk/h2o_dk 302s 302s cleaning scratch 302s copying input and verified output files 302s running nwchem (/usr/bin/nwchem) with 1 processors 302s 307s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 307s OK 307s 307s Running tests/cosmo_h2o/cosmo_h2o 307s 307s cleaning scratch 307s copying input and verified output files 307s running nwchem (/usr/bin/nwchem) with 1 processors 307s 309s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 309s OK 309s 309s Running tests/ch5n_nbo/ch5n_nbo 309s 309s cleaning scratch 309s copying input and verified output files 309s running nwchem (/usr/bin/nwchem) with 1 processors 309s 310s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 310s OK 310s 310s Running tests/h2s_finite/h2s_finite 310s 310s cleaning scratch 310s copying input and verified output files 310s running nwchem (/usr/bin/nwchem) with 1 processors 310s 314s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 314s OK 314s 314s Running tests/pyqa3/pyqa3 314s 314s cleaning scratch 314s copying input and verified output files 314s running nwchem (/usr/bin/nwchem) with 1 processors 314s 318s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 318s OK 318s 318s Running tests/startag/startag 318s 318s cleaning scratch 318s copying input and verified output files 318s running nwchem (/usr/bin/nwchem) with 1 processors 318s 320s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 320s OK 320s 320s Running tests/esp/esp 320s 320s cleaning scratch 320s copying input and verified output files 320s running nwchem (/usr/bin/nwchem) with 1 processors 320s 322s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 322s ESP charges match 322s 322s 322s Running tests/esp_uhf/esp_uhf 322s 322s cleaning scratch 322s copying input and verified output files 322s running nwchem (/usr/bin/nwchem) with 1 processors 322s 326s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 326s ESP charges match 326s 326s 326s Running tests/dft_bsse/dft_bsse 326s 326s cleaning scratch 326s copying input and verified output files 326s running nwchem (/usr/bin/nwchem) with 1 processors 326s 330s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 330s OK 330s 330s Running tests/dplot_dft/dplot_dft 330s 330s cleaning scratch 330s copying input and verified output files 330s running nwchem (/usr/bin/nwchem) with 1 processors 330s 332s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 332s OK 332s 332s Running tests/dft_meta/dft_meta 332s 332s cleaning scratch 332s copying input and verified output files 332s running nwchem (/usr/bin/nwchem) with 1 processors 332s 375s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 375s OK 375s 375s Running tests/dft_mpwb1khf/dft_mpwb1khf 375s 375s cleaning scratch 375s copying input and verified output files 375s running nwchem (/usr/bin/nwchem) with 1 processors 375s 379s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 379s OK 379s 379s Running tests/prop_uhf_h2o/prop_uhf_h2o 379s 379s cleaning scratch 379s copying input and verified output files 379s running nwchem (/usr/bin/nwchem) with 1 processors 379s 394s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 394s OK 394s 394s Running tests/et_zn_dimer/et_zn_dimer 394s 394s cleaning scratch 394s copying input and verified output files 394s running nwchem (/usr/bin/nwchem) with 1 processors 394s 413s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 413s OK 413s 413s Running tests/vectors_rotate/vectors_rotate 413s 413s cleaning scratch 414s copying input and verified output files 414s running nwchem (/usr/bin/nwchem) with 1 processors 414s 416s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 416s OK 416s 416s Running tests/sad_ch3hf/sad_ch3hf 416s 416s cleaning scratch 416s copying input and verified output files 416s running nwchem (/usr/bin/nwchem) with 1 processors 416s 428s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 428s OK 428s 428s Running tests/band/band 428s 428s cleaning scratch 428s copying input and verified output files 428s running nwchem (/usr/bin/nwchem) with 1 processors 428s 435s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 435s OK 435s 435s Running tests/pspw/pspw 435s 435s cleaning scratch 435s copying input and verified output files 435s running nwchem (/usr/bin/nwchem) with 1 processors 435s 448s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 448s OK 448s 448s Running tests/pspw_stress/pspw_stress 448s 448s cleaning scratch 448s copying input and verified output files 448s running nwchem (/usr/bin/nwchem) with 1 processors 448s 464s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 464s OK 464s 464s Running tests/mcscf_ch2/mcscf_ch2 464s 464s cleaning scratch 464s copying input and verified output files 464s running nwchem (/usr/bin/nwchem) with 1 processors 464s 485s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 485s OK 485s 485s Running tests/dft_li2freq/dft_li2freq 485s 485s cleaning scratch 485s copying input and verified output files 485s running nwchem (/usr/bin/nwchem) with 1 processors 485s 535s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 535s OK 535s 535s Running tests/n2_ccsd/n2_ccsd 535s 535s cleaning scratch 535s copying input and verified output files 535s running nwchem (/usr/bin/nwchem) with 1 processors 535s 570s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 570s OK 570s 570s Running tests/tce_ccsd_t_h2o/tce_ccsd_t_h2o 570s 570s cleaning scratch 570s copying input and verified output files 570s running nwchem (/usr/bin/nwchem) with 1 processors 570s 573s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 573s OK 573s 573s Running tests/tddft_h2o/tddft_h2o 573s 573s cleaning scratch 573s copying input and verified output files 573s running nwchem (/usr/bin/nwchem) with 1 processors 573s 602s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 602s OK 602s 602s Running tests/rt_tddft_dimer_charge/rt_tddft_dimer_charge 602s 602s cleaning scratch 602s copying input and verified output files 602s running nwchem (/usr/bin/nwchem) with 1 processors 602s 838s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 838s OK 838s 838s Running tests/tce_eaccsd_ozone/tce_eaccsd_ozone 838s 838s cleaning scratch 838s copying input and verified output files 838s running nwchem (/usr/bin/nwchem) with 1 processors 838s 854s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 854s OK 854s 854s Running tests/tce_ipccsd_f2/tce_ipccsd_f2 854s 854s cleaning scratch 854s copying input and verified output files 854s running nwchem (/usr/bin/nwchem) with 1 processors 854s 858s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 858s OK 858s 858s Running tests/tce_hyperpolar_ccsd_small/tce_hyperpolar_ccsd_small 858s 858s cleaning scratch 858s copying input and verified output files 858s running nwchem (/usr/bin/nwchem) with 1 processors 858s 918s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 918s OK 918s 918s Running tests/mp2_scs_n2/mp2_scs_n2 918s 918s cleaning scratch 918s copying input and verified output files 918s running nwchem (/usr/bin/nwchem) with 1 processors 918s 938s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 938s OK 938s 938s Running tests/tddftgrad_n2_uks/tddftgrad_n2_uks 938s 938s cleaning scratch 938s copying input and verified output files 938s running nwchem (/usr/bin/nwchem) with 1 processors 938s 972s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 972s OK 972s 972s Running tests/tddftgrad_ch2o/tddftgrad_ch2o 972s 972s cleaning scratch 972s copying input and verified output files 972s running nwchem (/usr/bin/nwchem) with 1 processors 972s 981s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 981s OK 981s 981s Running tests/water/water_md 981s 981s cleaning scratch 981s copying input and verified output files 981s running nwchem (/usr/bin/nwchem) with 1 processors 981s 982s verifying nwout ...... skipped 982s verifying test ....... completed 982s 982s Running tests/water/water_pme 982s 982s cleaning scratch 982s copying input and verified output files 982s running nwchem (/usr/bin/nwchem) with 1 processors 982s 982s verifying nwout ...... skipped 982s verifying test ....... completed 982s 982s Running tests/pspw_md/pspw_md 982s 982s cleaning scratch 982s copying input and verified output files 982s running nwchem (/usr/bin/nwchem) with 1 processors 982s 998s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 998s OK 998s 998s Running tests/cosmo_h3co/cosmo_h3co 998s 998s cleaning scratch 998s copying input and verified output files 998s running nwchem (/usr/bin/nwchem) with 1 processors 998s 1007s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1007s OK 1007s 1007s OK 1007s autopkgtest [19:03:22]: test testsuite.sh: -----------------------] 1008s testsuite.sh PASS 1008s autopkgtest [19:03:23]: test testsuite.sh: - - - - - - - - - - results - - - - - - - - - - 1008s autopkgtest [19:03:23]: test testsuite-openmpi: preparing testbed 1073s autopkgtest [19:04:28]: testbed dpkg architecture: amd64 1073s autopkgtest [19:04:28]: testbed apt version: 3.0.0 1074s autopkgtest [19:04:29]: @@@@@@@@@@@@@@@@@@@@ test bed setup 1074s autopkgtest [19:04:29]: testbed release detected to be: questing 1075s autopkgtest [19:04:30]: updating testbed package index (apt update) 1075s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB] 1075s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 1075s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 1076s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 1076s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [33.7 kB] 1076s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [1442 kB] 1076s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [149 kB] 1076s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main i386 Packages [146 kB] 1076s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 Packages [203 kB] 1076s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/universe i386 Packages [576 kB] 1076s Get:11 http://ftpmaster.internal/ubuntu questing-proposed/universe amd64 Packages [1424 kB] 1076s Get:12 http://ftpmaster.internal/ubuntu questing-proposed/multiverse amd64 Packages [48.6 kB] 1076s Get:13 http://ftpmaster.internal/ubuntu questing-proposed/multiverse i386 Packages [23.1 kB] 1076s Fetched 4155 kB in 1s (3968 kB/s) 1077s Reading package lists... 1078s autopkgtest [19:04:33]: upgrading testbed (apt dist-upgrade and autopurge) 1078s Reading package lists... 1078s Building dependency tree... 1078s Reading state information... 1079s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 1079s Starting 2 pkgProblemResolver with broken count: 0 1079s Done 1079s Entering ResolveByKeep 1080s 1080s Calculating upgrade... 1080s The following packages will be upgraded: 1080s cloud-init cloud-init-base debianutils libmbim-glib4 libmbim-proxy 1080s libnftnl11 libqmi-glib5 libqmi-proxy libsepol2 python3-lazr.restfulclient 1080s sos 1080s 11 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1080s Need to get 2693 kB of archives. 1080s After this operation, 104 kB disk space will be freed. 1080s Get:1 http://ftpmaster.internal/ubuntu questing/main amd64 debianutils amd64 5.22 [93.0 kB] 1080s Get:2 http://ftpmaster.internal/ubuntu questing/main amd64 libsepol2 amd64 3.8.1-1 [327 kB] 1080s Get:3 http://ftpmaster.internal/ubuntu questing/main amd64 libnftnl11 amd64 1.2.9-1 [69.1 kB] 1080s Get:4 http://ftpmaster.internal/ubuntu questing/main amd64 cloud-init-base all 25.2~1g7a0265d3-0ubuntu1 [619 kB] 1081s Get:5 http://ftpmaster.internal/ubuntu questing/main amd64 libmbim-proxy amd64 1.32.0-1 [6276 B] 1081s Get:6 http://ftpmaster.internal/ubuntu questing/main amd64 libmbim-glib4 amd64 1.32.0-1 [233 kB] 1081s Get:7 http://ftpmaster.internal/ubuntu questing/main amd64 libqmi-proxy amd64 1.36.0-1 [6220 B] 1081s Get:8 http://ftpmaster.internal/ubuntu questing/main amd64 libqmi-glib5 amd64 1.36.0-1 [920 kB] 1081s Get:9 http://ftpmaster.internal/ubuntu questing/main amd64 python3-lazr.restfulclient all 0.14.6-3 [51.0 kB] 1081s Get:10 http://ftpmaster.internal/ubuntu questing/main amd64 sos all 4.9.1-1 [367 kB] 1081s Get:11 http://ftpmaster.internal/ubuntu questing/main amd64 cloud-init all 25.2~1g7a0265d3-0ubuntu1 [2106 B] 1081s Preconfiguring packages ... 1081s Fetched 2693 kB in 1s (3989 kB/s) 1081s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80514 files and directories currently installed.) 1081s Preparing to unpack .../debianutils_5.22_amd64.deb ... 1081s Unpacking debianutils (5.22) over (5.21) ... 1081s Setting up debianutils (5.22) ... 1081s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80514 files and directories currently installed.) 1081s Preparing to unpack .../libsepol2_3.8.1-1_amd64.deb ... 1081s Unpacking libsepol2:amd64 (3.8.1-1) over (3.7-1) ... 1082s Setting up libsepol2:amd64 (3.8.1-1) ... 1082s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80514 files and directories currently installed.) 1082s Preparing to unpack .../0-libnftnl11_1.2.9-1_amd64.deb ... 1082s Unpacking libnftnl11:amd64 (1.2.9-1) over (1.2.8-1) ... 1082s Preparing to unpack .../1-cloud-init-base_25.2~1g7a0265d3-0ubuntu1_all.deb ... 1082s Unpacking cloud-init-base (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ... 1082s Preparing to unpack .../2-libmbim-proxy_1.32.0-1_amd64.deb ... 1082s Unpacking libmbim-proxy (1.32.0-1) over (1.31.2-0ubuntu4) ... 1082s Preparing to unpack .../3-libmbim-glib4_1.32.0-1_amd64.deb ... 1082s Unpacking libmbim-glib4:amd64 (1.32.0-1) over (1.31.2-0ubuntu4) ... 1082s Preparing to unpack .../4-libqmi-proxy_1.36.0-1_amd64.deb ... 1082s Unpacking libqmi-proxy (1.36.0-1) over (1.35.6-1) ... 1082s Preparing to unpack .../5-libqmi-glib5_1.36.0-1_amd64.deb ... 1082s Unpacking libqmi-glib5:amd64 (1.36.0-1) over (1.35.6-1) ... 1082s Preparing to unpack .../6-python3-lazr.restfulclient_0.14.6-3_all.deb ... 1082s Unpacking python3-lazr.restfulclient (0.14.6-3) over (0.14.6-2) ... 1082s Preparing to unpack .../7-sos_4.9.1-1_all.deb ... 1083s Unpacking sos (4.9.1-1) over (4.9.0-6) ... 1083s Preparing to unpack .../8-cloud-init_25.2~1g7a0265d3-0ubuntu1_all.deb ... 1083s Unpacking cloud-init (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ... 1083s Setting up sos (4.9.1-1) ... 1083s Setting up libnftnl11:amd64 (1.2.9-1) ... 1083s Setting up cloud-init-base (25.2~1g7a0265d3-0ubuntu1) ... 1085s Setting up python3-lazr.restfulclient (0.14.6-3) ... 1085s Setting up libmbim-glib4:amd64 (1.32.0-1) ... 1085s Setting up cloud-init (25.2~1g7a0265d3-0ubuntu1) ... 1085s Setting up libmbim-proxy (1.32.0-1) ... 1085s Setting up libqmi-glib5:amd64 (1.36.0-1) ... 1085s Setting up libqmi-proxy (1.36.0-1) ... 1085s Processing triggers for libc-bin (2.41-6ubuntu1) ... 1085s Processing triggers for rsyslog (8.2412.0-2ubuntu2) ... 1085s Processing triggers for man-db (2.13.0-1) ... 1087s Reading package lists... 1087s Building dependency tree... 1087s Reading state information... 1088s Starting pkgProblemResolver with broken count: 0 1088s Starting 2 pkgProblemResolver with broken count: 0 1088s Done 1088s Solving dependencies... 1088s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1088s autopkgtest [19:04:43]: rebooting testbed after setup commands that affected boot 1114s Reading package lists... 1114s Building dependency tree... 1114s Reading state information... 1115s Starting pkgProblemResolver with broken count: 0 1115s Starting 2 pkgProblemResolver with broken count: 0 1115s Done 1115s The following NEW packages will be installed: 1115s libamd-comgr2 libamdhip64-5 libblas3 libevent-pthreads-2.1-7t64 libfabric1 1115s libgfortran5 libgomp1 libhsa-runtime64-1 libhsakmt1 libhwloc-plugins 1115s libhwloc15 libibmad5 libibumad3 liblapack3 libllvm17t64 libmunge2 1115s libopenmpi40 libpciaccess0 libpmix2t64 libpsm-infinipath1 libpsm2-2 1115s librdmacm1t64 libscalapack-openmpi2.2 libucx0 libxnvctrl0 mpi-default-bin 1115s nwchem-data nwchem-openmpi ocl-icd-libopencl1 openmpi-bin openmpi-common 1115s 0 upgraded, 31 newly installed, 0 to remove and 0 not upgraded. 1115s Need to get 84.6 MB of archives. 1115s After this operation, 378 MB of additional disk space will be used. 1115s Get:1 http://ftpmaster.internal/ubuntu questing/universe amd64 libllvm17t64 amd64 1:17.0.6-21 [26.0 MB] 1116s Get:2 http://ftpmaster.internal/ubuntu questing/universe amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3build2 [14.4 MB] 1117s Get:3 http://ftpmaster.internal/ubuntu questing/universe amd64 libhsakmt1 amd64 5.7.0-1build1 [62.9 kB] 1117s Get:4 http://ftpmaster.internal/ubuntu questing/universe amd64 libhsa-runtime64-1 amd64 5.7.1-2build1 [491 kB] 1117s Get:5 http://ftpmaster.internal/ubuntu questing/universe amd64 libamdhip64-5 amd64 5.7.1-5.1 [9695 kB] 1117s Get:6 http://ftpmaster.internal/ubuntu questing/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 1117s Get:7 http://ftpmaster.internal/ubuntu questing/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10 [7966 B] 1117s Get:8 http://ftpmaster.internal/ubuntu questing/universe amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.4 [179 kB] 1117s Get:9 http://ftpmaster.internal/ubuntu questing/universe amd64 libpsm2-2 amd64 11.2.185-2.1 [193 kB] 1117s Get:10 http://ftpmaster.internal/ubuntu questing/main amd64 librdmacm1t64 amd64 56.0-4ubuntu1 [71.5 kB] 1117s Get:11 http://ftpmaster.internal/ubuntu questing/universe amd64 libfabric1 amd64 1.17.0-3.1 [789 kB] 1117s Get:12 http://ftpmaster.internal/ubuntu questing/main amd64 libgfortran5 amd64 15-20250404-0ubuntu1 [926 kB] 1117s Get:13 http://ftpmaster.internal/ubuntu questing/main amd64 libgomp1 amd64 15-20250404-0ubuntu1 [151 kB] 1117s Get:14 http://ftpmaster.internal/ubuntu questing/universe amd64 libhwloc15 amd64 2.12.0-1 [194 kB] 1117s Get:15 http://ftpmaster.internal/ubuntu questing/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 1117s Get:16 http://ftpmaster.internal/ubuntu questing/universe amd64 libmunge2 amd64 0.5.16-1 [16.5 kB] 1117s Get:17 http://ftpmaster.internal/ubuntu questing/main amd64 libpciaccess0 amd64 0.17-3build1 [18.6 kB] 1117s Get:18 http://ftpmaster.internal/ubuntu questing/main amd64 libxnvctrl0 amd64 510.47.03-0ubuntu4 [12.6 kB] 1117s Get:19 http://ftpmaster.internal/ubuntu questing/universe amd64 ocl-icd-libopencl1 amd64 2.3.2-1build1 [38.5 kB] 1117s Get:20 http://ftpmaster.internal/ubuntu questing/universe amd64 libhwloc-plugins amd64 2.12.0-1 [16.0 kB] 1117s Get:21 http://ftpmaster.internal/ubuntu questing/universe amd64 libpmix2t64 amd64 5.0.6-5 [714 kB] 1117s Get:22 http://ftpmaster.internal/ubuntu questing/main amd64 libibumad3 amd64 56.0-4ubuntu1 [31.2 kB] 1117s Get:23 http://ftpmaster.internal/ubuntu questing/main amd64 libibmad5 amd64 56.0-4ubuntu1 [43.9 kB] 1117s Get:24 http://ftpmaster.internal/ubuntu questing/universe amd64 libucx0 amd64 1.18.1+ds-2 [1293 kB] 1117s Get:25 http://ftpmaster.internal/ubuntu questing/universe amd64 libopenmpi40 amd64 5.0.7-1 [2526 kB] 1117s Get:26 http://ftpmaster.internal/ubuntu questing/universe amd64 openmpi-common all 5.0.7-1 [97.9 kB] 1117s Get:27 http://ftpmaster.internal/ubuntu questing/universe amd64 openmpi-bin amd64 5.0.7-1 [192 kB] 1117s Get:28 http://ftpmaster.internal/ubuntu questing/universe amd64 mpi-default-bin amd64 1.18 [2510 B] 1117s Get:29 http://ftpmaster.internal/ubuntu questing/universe amd64 libscalapack-openmpi2.2 amd64 2.2.2-1ubuntu1 [2073 kB] 1117s Get:30 http://ftpmaster.internal/ubuntu questing/universe amd64 nwchem-data all 7.2.3-7build1 [6076 kB] 1117s Get:31 http://ftpmaster.internal/ubuntu questing/universe amd64 nwchem-openmpi amd64 7.2.3-7build1 [14.8 MB] 1118s Fetched 84.6 MB in 3s (31.9 MB/s) 1118s Selecting previously unselected package libllvm17t64:amd64. 1118s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80518 files and directories currently installed.) 1118s Preparing to unpack .../00-libllvm17t64_1%3a17.0.6-21_amd64.deb ... 1118s Unpacking libllvm17t64:amd64 (1:17.0.6-21) ... 1119s Selecting previously unselected package libamd-comgr2:amd64. 1119s Preparing to unpack .../01-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3build2_amd64.deb ... 1119s Unpacking libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3build2) ... 1119s Selecting previously unselected package libhsakmt1:amd64. 1119s Preparing to unpack .../02-libhsakmt1_5.7.0-1build1_amd64.deb ... 1119s Unpacking libhsakmt1:amd64 (5.7.0-1build1) ... 1119s Selecting previously unselected package libhsa-runtime64-1. 1119s Preparing to unpack .../03-libhsa-runtime64-1_5.7.1-2build1_amd64.deb ... 1119s Unpacking libhsa-runtime64-1 (5.7.1-2build1) ... 1119s Selecting previously unselected package libamdhip64-5. 1119s Preparing to unpack .../04-libamdhip64-5_5.7.1-5.1_amd64.deb ... 1119s Unpacking libamdhip64-5 (5.7.1-5.1) ... 1119s Selecting previously unselected package libblas3:amd64. 1119s Preparing to unpack .../05-libblas3_3.12.1-2_amd64.deb ... 1119s Unpacking libblas3:amd64 (3.12.1-2) ... 1119s Selecting previously unselected package libevent-pthreads-2.1-7t64:amd64. 1119s Preparing to unpack .../06-libevent-pthreads-2.1-7t64_2.1.12-stable-10_amd64.deb ... 1119s Unpacking libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10) ... 1119s Selecting previously unselected package libpsm-infinipath1. 1119s Preparing to unpack .../07-libpsm-infinipath1_3.3+20.604758e7-6.4_amd64.deb ... 1119s Unpacking libpsm-infinipath1 (3.3+20.604758e7-6.4) ... 1119s Selecting previously unselected package libpsm2-2. 1119s Preparing to unpack .../08-libpsm2-2_11.2.185-2.1_amd64.deb ... 1119s Unpacking libpsm2-2 (11.2.185-2.1) ... 1119s Selecting previously unselected package librdmacm1t64:amd64. 1120s Preparing to unpack .../09-librdmacm1t64_56.0-4ubuntu1_amd64.deb ... 1120s Unpacking librdmacm1t64:amd64 (56.0-4ubuntu1) ... 1120s Selecting previously unselected package libfabric1:amd64. 1120s Preparing to unpack .../10-libfabric1_1.17.0-3.1_amd64.deb ... 1120s Unpacking libfabric1:amd64 (1.17.0-3.1) ... 1120s Selecting previously unselected package libgfortran5:amd64. 1120s Preparing to unpack .../11-libgfortran5_15-20250404-0ubuntu1_amd64.deb ... 1120s Unpacking libgfortran5:amd64 (15-20250404-0ubuntu1) ... 1120s Selecting previously unselected package libgomp1:amd64. 1120s Preparing to unpack .../12-libgomp1_15-20250404-0ubuntu1_amd64.deb ... 1120s Unpacking libgomp1:amd64 (15-20250404-0ubuntu1) ... 1120s Selecting previously unselected package libhwloc15:amd64. 1120s Preparing to unpack .../13-libhwloc15_2.12.0-1_amd64.deb ... 1120s Unpacking libhwloc15:amd64 (2.12.0-1) ... 1120s Selecting previously unselected package liblapack3:amd64. 1120s Preparing to unpack .../14-liblapack3_3.12.1-2_amd64.deb ... 1120s Unpacking liblapack3:amd64 (3.12.1-2) ... 1120s Selecting previously unselected package libmunge2:amd64. 1120s Preparing to unpack .../15-libmunge2_0.5.16-1_amd64.deb ... 1120s Unpacking libmunge2:amd64 (0.5.16-1) ... 1120s Selecting previously unselected package libpciaccess0:amd64. 1120s Preparing to unpack .../16-libpciaccess0_0.17-3build1_amd64.deb ... 1120s Unpacking libpciaccess0:amd64 (0.17-3build1) ... 1120s Selecting previously unselected package libxnvctrl0:amd64. 1120s Preparing to unpack .../17-libxnvctrl0_510.47.03-0ubuntu4_amd64.deb ... 1120s Unpacking libxnvctrl0:amd64 (510.47.03-0ubuntu4) ... 1120s Selecting previously unselected package ocl-icd-libopencl1:amd64. 1120s Preparing to unpack .../18-ocl-icd-libopencl1_2.3.2-1build1_amd64.deb ... 1120s Unpacking ocl-icd-libopencl1:amd64 (2.3.2-1build1) ... 1120s Selecting previously unselected package libhwloc-plugins:amd64. 1120s Preparing to unpack .../19-libhwloc-plugins_2.12.0-1_amd64.deb ... 1120s Unpacking libhwloc-plugins:amd64 (2.12.0-1) ... 1120s Selecting previously unselected package libpmix2t64:amd64. 1120s Preparing to unpack .../20-libpmix2t64_5.0.6-5_amd64.deb ... 1120s Unpacking libpmix2t64:amd64 (5.0.6-5) ... 1120s Selecting previously unselected package libibumad3:amd64. 1120s Preparing to unpack .../21-libibumad3_56.0-4ubuntu1_amd64.deb ... 1120s Unpacking libibumad3:amd64 (56.0-4ubuntu1) ... 1120s Selecting previously unselected package libibmad5:amd64. 1120s Preparing to unpack .../22-libibmad5_56.0-4ubuntu1_amd64.deb ... 1120s Unpacking libibmad5:amd64 (56.0-4ubuntu1) ... 1120s Selecting previously unselected package libucx0:amd64. 1120s Preparing to unpack .../23-libucx0_1.18.1+ds-2_amd64.deb ... 1120s Unpacking libucx0:amd64 (1.18.1+ds-2) ... 1120s Selecting previously unselected package libopenmpi40:amd64. 1120s Preparing to unpack .../24-libopenmpi40_5.0.7-1_amd64.deb ... 1120s Unpacking libopenmpi40:amd64 (5.0.7-1) ... 1120s Selecting previously unselected package openmpi-common. 1120s Preparing to unpack .../25-openmpi-common_5.0.7-1_all.deb ... 1120s Unpacking openmpi-common (5.0.7-1) ... 1120s Selecting previously unselected package openmpi-bin. 1120s Preparing to unpack .../26-openmpi-bin_5.0.7-1_amd64.deb ... 1120s Unpacking openmpi-bin (5.0.7-1) ... 1120s Selecting previously unselected package mpi-default-bin. 1120s Preparing to unpack .../27-mpi-default-bin_1.18_amd64.deb ... 1120s Unpacking mpi-default-bin (1.18) ... 1120s Selecting previously unselected package libscalapack-openmpi2.2:amd64. 1120s Preparing to unpack .../28-libscalapack-openmpi2.2_2.2.2-1ubuntu1_amd64.deb ... 1120s Unpacking libscalapack-openmpi2.2:amd64 (2.2.2-1ubuntu1) ... 1120s Selecting previously unselected package nwchem-data. 1120s Preparing to unpack .../29-nwchem-data_7.2.3-7build1_all.deb ... 1120s Unpacking nwchem-data (7.2.3-7build1) ... 1121s Selecting previously unselected package nwchem-openmpi. 1121s Preparing to unpack .../30-nwchem-openmpi_7.2.3-7build1_amd64.deb ... 1121s Unpacking nwchem-openmpi (7.2.3-7build1) ... 1121s Setting up libpciaccess0:amd64 (0.17-3build1) ... 1121s Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10) ... 1121s Setting up nwchem-data (7.2.3-7build1) ... 1121s Setting up libibumad3:amd64 (56.0-4ubuntu1) ... 1121s Setting up libibmad5:amd64 (56.0-4ubuntu1) ... 1121s Setting up libgomp1:amd64 (15-20250404-0ubuntu1) ... 1121s Setting up libxnvctrl0:amd64 (510.47.03-0ubuntu4) ... 1121s Setting up libblas3:amd64 (3.12.1-2) ... 1121s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 1121s Setting up libmunge2:amd64 (0.5.16-1) ... 1121s Setting up libllvm17t64:amd64 (1:17.0.6-21) ... 1121s Setting up libhwloc15:amd64 (2.12.0-1) ... 1121s Setting up libgfortran5:amd64 (15-20250404-0ubuntu1) ... 1121s Setting up ocl-icd-libopencl1:amd64 (2.3.2-1build1) ... 1121s Setting up libpsm2-2 (11.2.185-2.1) ... 1121s Setting up openmpi-common (5.0.7-1) ... 1121s Setting up librdmacm1t64:amd64 (56.0-4ubuntu1) ... 1121s Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3build2) ... 1121s Setting up libpsm-infinipath1 (3.3+20.604758e7-6.4) ... 1121s update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode 1121s Setting up libhsakmt1:amd64 (5.7.0-1build1) ... 1121s Setting up libfabric1:amd64 (1.17.0-3.1) ... 1121s Setting up liblapack3:amd64 (3.12.1-2) ... 1121s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 1121s Setting up libhwloc-plugins:amd64 (2.12.0-1) ... 1121s Setting up libpmix2t64:amd64 (5.0.6-5) ... 1121s Setting up libhsa-runtime64-1 (5.7.1-2build1) ... 1121s Setting up libamdhip64-5 (5.7.1-5.1) ... 1121s Setting up libucx0:amd64 (1.18.1+ds-2) ... 1121s Setting up libopenmpi40:amd64 (5.0.7-1) ... 1121s Setting up openmpi-bin (5.0.7-1) ... 1121s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 1121s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 1121s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 1121s Setting up mpi-default-bin (1.18) ... 1121s Setting up libscalapack-openmpi2.2:amd64 (2.2.2-1ubuntu1) ... 1121s Setting up nwchem-openmpi (7.2.3-7build1) ... 1121s Processing triggers for man-db (2.13.0-1) ... 1122s Processing triggers for libc-bin (2.41-6ubuntu1) ... 1237s autopkgtest [19:07:12]: test testsuite-openmpi: [----------------------- 1237s ===== TESTING NWCHEM BUILD FOR openmpi ===== 1237s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 1237s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 1237s 1237s 1237s Running tests/dft_he2+/dft_he2+ 1237s 1237s cleaning scratch 1237s copying input and verified output files 1237s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1237s 1248s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1248s OK 1248s 1248s Running tests/qmmm_grad0/qmmm_grad0 1248s 1248s cleaning scratch 1248s copying input and verified output files 1248s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1248s 1253s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1253s OK 1253s 1253s Running tests/auh2o/auh2o 1253s 1253s cleaning scratch 1253s copying input and verified output files 1253s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1253s 1255s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1255s OK 1255s 1255s Running tests/autosym/autosym 1255s 1255s cleaning scratch 1255s copying input and verified output files 1255s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1255s 1265s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1265s OK 1265s 1265s Running tests/h2mp2/h2mp2 1265s 1265s cleaning scratch 1265s copying input and verified output files 1265s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1265s 1267s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1267s OK 1267s 1267s Running tests/h2o/h2o 1267s 1267s cleaning scratch 1267s copying input and verified output files 1267s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1267s 1269s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1269s OK 1269s 1269s Running tests/hess_h2o/hess_h2o 1269s 1269s cleaning scratch 1269s copying input and verified output files 1269s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1269s 1275s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1275s OK 1275s 1275s Running tests/prop_h2o/prop_h2o 1275s 1275s cleaning scratch 1275s copying input and verified output files 1275s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1275s 1278s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1278s OK 1278s 1278s Running tests/geom_zmatrix/geom_zmatrix 1278s 1278s cleaning scratch 1278s copying input and verified output files 1278s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1278s 1281s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1281s OK 1281s 1281s Running tests/rimp2_ne/rimp2_ne 1281s 1281s cleaning scratch 1281s copying input and verified output files 1281s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1281s 1284s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1284s OK 1284s 1284s Running tests/small_intchk/small_intchk 1284s 1284s cleaning scratch 1284s copying input and verified output files 1284s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1284s 1291s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1291s OK 1291s 1291s Running tests/tagcheck/tagcheck 1291s 1291s cleaning scratch 1291s copying input and verified output files 1291s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1291s 1294s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1294s OK 1294s 1294s Running tests/testtab/testtab 1294s 1294s cleaning scratch 1294s copying input and verified output files 1294s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1294s 1295s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1295s OK 1295s 1295s Running tests/h2o_dk/h2o_dk 1295s 1295s cleaning scratch 1295s copying input and verified output files 1295s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1295s 1299s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1299s OK 1299s 1299s Running tests/cosmo_h2o/cosmo_h2o 1299s 1299s cleaning scratch 1299s copying input and verified output files 1299s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1299s 1301s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1301s OK 1301s 1301s Running tests/ch5n_nbo/ch5n_nbo 1301s 1301s cleaning scratch 1301s copying input and verified output files 1301s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1301s 1302s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1302s OK 1302s 1302s Running tests/h2s_finite/h2s_finite 1302s 1302s cleaning scratch 1302s copying input and verified output files 1302s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1302s 1306s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1306s OK 1306s 1306s Running tests/pyqa3/pyqa3 1306s 1306s cleaning scratch 1306s copying input and verified output files 1306s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1306s 1310s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1310s OK 1310s 1310s Running tests/startag/startag 1310s 1310s cleaning scratch 1310s copying input and verified output files 1310s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1310s 1311s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1311s OK 1311s 1311s Running tests/esp/esp 1311s 1311s cleaning scratch 1311s copying input and verified output files 1311s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1311s 1314s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1314s ESP charges match 1314s 1314s 1314s Running tests/esp_uhf/esp_uhf 1314s 1314s cleaning scratch 1314s copying input and verified output files 1314s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1314s 1317s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1317s ESP charges match 1317s 1317s 1317s Running tests/dft_bsse/dft_bsse 1317s 1317s cleaning scratch 1317s copying input and verified output files 1317s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1317s 1321s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1321s OK 1321s 1321s Running tests/dplot_dft/dplot_dft 1321s 1321s cleaning scratch 1321s copying input and verified output files 1321s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1321s 1323s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1323s OK 1323s 1323s Running tests/dft_meta/dft_meta 1323s 1323s cleaning scratch 1323s copying input and verified output files 1323s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1323s 1363s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1363s OK 1363s 1363s Running tests/dft_mpwb1khf/dft_mpwb1khf 1363s 1363s cleaning scratch 1363s copying input and verified output files 1363s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1363s 1367s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1367s OK 1367s 1367s Running tests/prop_uhf_h2o/prop_uhf_h2o 1367s 1367s cleaning scratch 1367s copying input and verified output files 1367s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1367s 1381s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1381s OK 1381s 1381s Running tests/et_zn_dimer/et_zn_dimer 1381s 1381s cleaning scratch 1381s copying input and verified output files 1381s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1381s 1399s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1399s OK 1399s 1399s Running tests/vectors_rotate/vectors_rotate 1399s 1399s cleaning scratch 1399s copying input and verified output files 1399s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1399s 1402s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1402s OK 1402s 1402s Running tests/sad_ch3hf/sad_ch3hf 1402s 1402s cleaning scratch 1402s copying input and verified output files 1402s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1402s 1413s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1413s OK 1413s 1413s Running tests/band/band 1413s 1413s cleaning scratch 1413s copying input and verified output files 1413s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1413s 1419s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1419s OK 1419s 1419s Running tests/pspw/pspw 1419s 1419s cleaning scratch 1419s copying input and verified output files 1419s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1419s 1431s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1431s OK 1431s 1431s Running tests/pspw_stress/pspw_stress 1431s 1431s cleaning scratch 1431s copying input and verified output files 1431s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1431s 1445s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1445s OK 1445s 1445s Running tests/mcscf_ch2/mcscf_ch2 1445s 1445s cleaning scratch 1445s copying input and verified output files 1445s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1445s 1466s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1466s OK 1466s 1466s Running tests/dft_li2freq/dft_li2freq 1466s 1466s cleaning scratch 1466s copying input and verified output files 1466s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1466s 1515s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1515s OK 1515s 1515s Running tests/n2_ccsd/n2_ccsd 1515s 1515s cleaning scratch 1515s copying input and verified output files 1515s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1515s 1547s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1547s OK 1547s 1547s Running tests/tce_ccsd_t_h2o/tce_ccsd_t_h2o 1547s 1547s cleaning scratch 1547s copying input and verified output files 1547s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1547s 1550s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1550s OK 1550s 1550s Running tests/tddft_h2o/tddft_h2o 1550s 1550s cleaning scratch 1550s copying input and verified output files 1550s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1550s 1578s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1578s OK 1578s 1578s Running tests/rt_tddft_dimer_charge/rt_tddft_dimer_charge 1578s 1578s cleaning scratch 1578s copying input and verified output files 1578s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1578s 1814s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1814s OK 1814s 1814s Running tests/tce_eaccsd_ozone/tce_eaccsd_ozone 1814s 1814s cleaning scratch 1814s copying input and verified output files 1814s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1814s 1829s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1829s OK 1829s 1829s Running tests/tce_ipccsd_f2/tce_ipccsd_f2 1829s 1829s cleaning scratch 1829s copying input and verified output files 1829s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1829s 1833s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1833s OK 1833s 1833s Running tests/tce_hyperpolar_ccsd_small/tce_hyperpolar_ccsd_small 1833s 1833s cleaning scratch 1833s copying input and verified output files 1833s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1833s 1885s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1885s OK 1885s 1885s Running tests/mp2_scs_n2/mp2_scs_n2 1885s 1885s cleaning scratch 1885s copying input and verified output files 1885s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1885s 1901s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1901s OK 1901s 1901s Running tests/tddftgrad_n2_uks/tddftgrad_n2_uks 1901s 1901s cleaning scratch 1901s copying input and verified output files 1901s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1901s 1936s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1936s OK 1936s 1936s Running tests/tddftgrad_ch2o/tddftgrad_ch2o 1936s 1936s cleaning scratch 1936s copying input and verified output files 1936s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1936s 1945s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1945s OK 1945s 1945s Running tests/water/water_md 1945s 1945s cleaning scratch 1945s copying input and verified output files 1945s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1945s 1946s verifying nwout ...... skipped 1946s verifying test ....... completed 1946s 1946s Running tests/water/water_pme 1946s 1946s cleaning scratch 1946s copying input and verified output files 1946s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1946s 1946s verifying nwout ...... skipped 1946s verifying test ....... completed 1946s 1946s Running tests/pspw_md/pspw_md 1946s 1946s cleaning scratch 1946s copying input and verified output files 1946s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1946s 1959s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1959s OK 1959s 1959s Running tests/cosmo_h3co/cosmo_h3co 1959s 1959s cleaning scratch 1959s copying input and verified output files 1959s running nwchem (/usr/bin/nwchem.openmpi) with 1 processors 1959s 1968s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 1968s OK 1968s 1968s OK 1968s autopkgtest [19:19:23]: test testsuite-openmpi: -----------------------] 1969s testsuite-openmpi PASS 1969s autopkgtest [19:19:24]: test testsuite-openmpi: - - - - - - - - - - results - - - - - - - - - - 1969s autopkgtest [19:19:24]: test testsuite-mpich: preparing testbed 2021s autopkgtest [19:20:16]: testbed dpkg architecture: amd64 2021s autopkgtest [19:20:16]: testbed apt version: 3.0.0 2021s autopkgtest [19:20:16]: @@@@@@@@@@@@@@@@@@@@ test bed setup 2021s autopkgtest [19:20:16]: testbed release detected to be: questing 2022s autopkgtest [19:20:17]: updating testbed package index (apt update) 2022s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB] 2023s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 2023s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 2023s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 2023s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [33.7 kB] 2023s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [1442 kB] 2023s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [149 kB] 2023s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 Packages [203 kB] 2023s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/main i386 Packages [146 kB] 2023s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/universe i386 Packages [576 kB] 2023s Get:11 http://ftpmaster.internal/ubuntu questing-proposed/universe amd64 Packages [1424 kB] 2023s Get:12 http://ftpmaster.internal/ubuntu questing-proposed/multiverse amd64 Packages [48.6 kB] 2023s Get:13 http://ftpmaster.internal/ubuntu questing-proposed/multiverse i386 Packages [23.1 kB] 2023s Fetched 4155 kB in 1s (3902 kB/s) 2024s Reading package lists... 2025s autopkgtest [19:20:20]: upgrading testbed (apt dist-upgrade and autopurge) 2025s Reading package lists... 2025s Building dependency tree... 2025s Reading state information... 2026s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 2026s Starting 2 pkgProblemResolver with broken count: 0 2026s Done 2027s Entering ResolveByKeep 2027s 2028s Calculating upgrade... 2028s The following packages will be upgraded: 2028s cloud-init cloud-init-base debianutils libmbim-glib4 libmbim-proxy 2028s libnftnl11 libqmi-glib5 libqmi-proxy libsepol2 python3-lazr.restfulclient 2028s sos 2028s 11 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 2028s Need to get 2693 kB of archives. 2028s After this operation, 104 kB disk space will be freed. 2028s Get:1 http://ftpmaster.internal/ubuntu questing/main amd64 debianutils amd64 5.22 [93.0 kB] 2028s Get:2 http://ftpmaster.internal/ubuntu questing/main amd64 libsepol2 amd64 3.8.1-1 [327 kB] 2028s Get:3 http://ftpmaster.internal/ubuntu questing/main amd64 libnftnl11 amd64 1.2.9-1 [69.1 kB] 2028s Get:4 http://ftpmaster.internal/ubuntu questing/main amd64 cloud-init-base all 25.2~1g7a0265d3-0ubuntu1 [619 kB] 2028s Get:5 http://ftpmaster.internal/ubuntu questing/main amd64 libmbim-proxy amd64 1.32.0-1 [6276 B] 2028s Get:6 http://ftpmaster.internal/ubuntu questing/main amd64 libmbim-glib4 amd64 1.32.0-1 [233 kB] 2028s Get:7 http://ftpmaster.internal/ubuntu questing/main amd64 libqmi-proxy amd64 1.36.0-1 [6220 B] 2028s Get:8 http://ftpmaster.internal/ubuntu questing/main amd64 libqmi-glib5 amd64 1.36.0-1 [920 kB] 2028s Get:9 http://ftpmaster.internal/ubuntu questing/main amd64 python3-lazr.restfulclient all 0.14.6-3 [51.0 kB] 2028s Get:10 http://ftpmaster.internal/ubuntu questing/main amd64 sos all 4.9.1-1 [367 kB] 2028s Get:11 http://ftpmaster.internal/ubuntu questing/main amd64 cloud-init all 25.2~1g7a0265d3-0ubuntu1 [2106 B] 2029s Preconfiguring packages ... 2029s Fetched 2693 kB in 1s (4186 kB/s) 2029s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80514 files and directories currently installed.) 2029s Preparing to unpack .../debianutils_5.22_amd64.deb ... 2029s Unpacking debianutils (5.22) over (5.21) ... 2029s Setting up debianutils (5.22) ... 2029s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80514 files and directories currently installed.) 2029s Preparing to unpack .../libsepol2_3.8.1-1_amd64.deb ... 2029s Unpacking libsepol2:amd64 (3.8.1-1) over (3.7-1) ... 2029s Setting up libsepol2:amd64 (3.8.1-1) ... 2029s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80514 files and directories currently installed.) 2029s Preparing to unpack .../0-libnftnl11_1.2.9-1_amd64.deb ... 2029s Unpacking libnftnl11:amd64 (1.2.9-1) over (1.2.8-1) ... 2029s Preparing to unpack .../1-cloud-init-base_25.2~1g7a0265d3-0ubuntu1_all.deb ... 2030s Unpacking cloud-init-base (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ... 2030s Preparing to unpack .../2-libmbim-proxy_1.32.0-1_amd64.deb ... 2030s Unpacking libmbim-proxy (1.32.0-1) over (1.31.2-0ubuntu4) ... 2030s Preparing to unpack .../3-libmbim-glib4_1.32.0-1_amd64.deb ... 2030s Unpacking libmbim-glib4:amd64 (1.32.0-1) over (1.31.2-0ubuntu4) ... 2030s Preparing to unpack .../4-libqmi-proxy_1.36.0-1_amd64.deb ... 2030s Unpacking libqmi-proxy (1.36.0-1) over (1.35.6-1) ... 2030s Preparing to unpack .../5-libqmi-glib5_1.36.0-1_amd64.deb ... 2030s Unpacking libqmi-glib5:amd64 (1.36.0-1) over (1.35.6-1) ... 2030s Preparing to unpack .../6-python3-lazr.restfulclient_0.14.6-3_all.deb ... 2030s Unpacking python3-lazr.restfulclient (0.14.6-3) over (0.14.6-2) ... 2030s Preparing to unpack .../7-sos_4.9.1-1_all.deb ... 2030s Unpacking sos (4.9.1-1) over (4.9.0-6) ... 2030s Preparing to unpack .../8-cloud-init_25.2~1g7a0265d3-0ubuntu1_all.deb ... 2030s Unpacking cloud-init (25.2~1g7a0265d3-0ubuntu1) over (25.1.1-0ubuntu2) ... 2031s Setting up sos (4.9.1-1) ... 2031s Setting up libnftnl11:amd64 (1.2.9-1) ... 2031s Setting up cloud-init-base (25.2~1g7a0265d3-0ubuntu1) ... 2032s Setting up python3-lazr.restfulclient (0.14.6-3) ... 2033s Setting up libmbim-glib4:amd64 (1.32.0-1) ... 2033s Setting up cloud-init (25.2~1g7a0265d3-0ubuntu1) ... 2033s Setting up libmbim-proxy (1.32.0-1) ... 2033s Setting up libqmi-glib5:amd64 (1.36.0-1) ... 2033s Setting up libqmi-proxy (1.36.0-1) ... 2033s Processing triggers for libc-bin (2.41-6ubuntu1) ... 2033s Processing triggers for rsyslog (8.2412.0-2ubuntu2) ... 2033s Processing triggers for man-db (2.13.0-1) ... 2035s Reading package lists... 2035s Building dependency tree... 2035s Reading state information... 2035s Starting pkgProblemResolver with broken count: 0 2035s Starting 2 pkgProblemResolver with broken count: 0 2035s Done 2036s Solving dependencies... 2036s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 2036s autopkgtest [19:20:31]: rebooting testbed after setup commands that affected boot 2062s Reading package lists... 2062s Building dependency tree... 2062s Reading state information... 2063s Starting pkgProblemResolver with broken count: 0 2063s Starting 2 pkgProblemResolver with broken count: 0 2063s Done 2063s The following NEW packages will be installed: 2063s hwloc-nox libamd-comgr2 libamdhip64-5 libblas3 libevent-pthreads-2.1-7t64 2063s libfabric1 libgfortran5 libgomp1 libhsa-runtime64-1 libhsakmt1 2063s libhwloc-plugins libhwloc15 libibmad5 libibumad3 liblapack3 libllvm17t64 2063s libmpich12 libmunge2 libopenmpi40 libpciaccess0 libpmix2t64 2063s libpsm-infinipath1 libpsm2-2 librdmacm1t64 libscalapack-mpich2.2 2063s libslurm42t64 libucx0 libxnvctrl0 mpi-default-bin mpich nwchem-data 2063s nwchem-mpich ocl-icd-libopencl1 openmpi-bin openmpi-common 2064s 0 upgraded, 35 newly installed, 0 to remove and 0 not upgraded. 2064s Need to get 88.7 MB of archives. 2064s After this operation, 393 MB of additional disk space will be used. 2064s Get:1 http://ftpmaster.internal/ubuntu questing/universe amd64 libllvm17t64 amd64 1:17.0.6-21 [26.0 MB] 2065s Get:2 http://ftpmaster.internal/ubuntu questing/universe amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3build2 [14.4 MB] 2065s Get:3 http://ftpmaster.internal/ubuntu questing/universe amd64 libhsakmt1 amd64 5.7.0-1build1 [62.9 kB] 2065s Get:4 http://ftpmaster.internal/ubuntu questing/universe amd64 libhsa-runtime64-1 amd64 5.7.1-2build1 [491 kB] 2065s Get:5 http://ftpmaster.internal/ubuntu questing/universe amd64 libamdhip64-5 amd64 5.7.1-5.1 [9695 kB] 2065s Get:6 http://ftpmaster.internal/ubuntu questing/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 2065s Get:7 http://ftpmaster.internal/ubuntu questing/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10 [7966 B] 2065s Get:8 http://ftpmaster.internal/ubuntu questing/universe amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.4 [179 kB] 2065s Get:9 http://ftpmaster.internal/ubuntu questing/universe amd64 libpsm2-2 amd64 11.2.185-2.1 [193 kB] 2065s Get:10 http://ftpmaster.internal/ubuntu questing/main amd64 librdmacm1t64 amd64 56.0-4ubuntu1 [71.5 kB] 2065s Get:11 http://ftpmaster.internal/ubuntu questing/universe amd64 libfabric1 amd64 1.17.0-3.1 [789 kB] 2065s Get:12 http://ftpmaster.internal/ubuntu questing/main amd64 libgfortran5 amd64 15-20250404-0ubuntu1 [926 kB] 2065s Get:13 http://ftpmaster.internal/ubuntu questing/main amd64 libgomp1 amd64 15-20250404-0ubuntu1 [151 kB] 2065s Get:14 http://ftpmaster.internal/ubuntu questing/universe amd64 libhwloc15 amd64 2.12.0-1 [194 kB] 2065s Get:15 http://ftpmaster.internal/ubuntu questing/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 2065s Get:16 http://ftpmaster.internal/ubuntu questing/universe amd64 libmunge2 amd64 0.5.16-1 [16.5 kB] 2065s Get:17 http://ftpmaster.internal/ubuntu questing/main amd64 libpciaccess0 amd64 0.17-3build1 [18.6 kB] 2065s Get:18 http://ftpmaster.internal/ubuntu questing/main amd64 libxnvctrl0 amd64 510.47.03-0ubuntu4 [12.6 kB] 2065s Get:19 http://ftpmaster.internal/ubuntu questing/universe amd64 ocl-icd-libopencl1 amd64 2.3.2-1build1 [38.5 kB] 2065s Get:20 http://ftpmaster.internal/ubuntu questing/universe amd64 libhwloc-plugins amd64 2.12.0-1 [16.0 kB] 2065s Get:21 http://ftpmaster.internal/ubuntu questing/universe amd64 libpmix2t64 amd64 5.0.6-5 [714 kB] 2065s Get:22 http://ftpmaster.internal/ubuntu questing/main amd64 libibumad3 amd64 56.0-4ubuntu1 [31.2 kB] 2065s Get:23 http://ftpmaster.internal/ubuntu questing/main amd64 libibmad5 amd64 56.0-4ubuntu1 [43.9 kB] 2066s Get:24 http://ftpmaster.internal/ubuntu questing/universe amd64 libucx0 amd64 1.18.1+ds-2 [1293 kB] 2066s Get:25 http://ftpmaster.internal/ubuntu questing/universe amd64 libopenmpi40 amd64 5.0.7-1 [2526 kB] 2066s Get:26 http://ftpmaster.internal/ubuntu questing/universe amd64 openmpi-common all 5.0.7-1 [97.9 kB] 2066s Get:27 http://ftpmaster.internal/ubuntu questing/universe amd64 openmpi-bin amd64 5.0.7-1 [192 kB] 2066s Get:28 http://ftpmaster.internal/ubuntu questing/universe amd64 mpi-default-bin amd64 1.18 [2510 B] 2066s Get:29 http://ftpmaster.internal/ubuntu questing-proposed/universe amd64 libmpich12 amd64 4.3.0-5 [3080 kB] 2066s Get:30 http://ftpmaster.internal/ubuntu questing/universe amd64 libscalapack-mpich2.2 amd64 2.2.2-1ubuntu1 [2063 kB] 2066s Get:31 http://ftpmaster.internal/ubuntu questing/universe amd64 libslurm42t64 amd64 24.11.3-2 [653 kB] 2066s Get:32 http://ftpmaster.internal/ubuntu questing/universe amd64 nwchem-data all 7.2.3-7build1 [6076 kB] 2066s Get:33 http://ftpmaster.internal/ubuntu questing/universe amd64 hwloc-nox amd64 2.12.0-1 [254 kB] 2066s Get:34 http://ftpmaster.internal/ubuntu questing-proposed/universe amd64 mpich amd64 4.3.0-5 [200 kB] 2066s Get:35 http://ftpmaster.internal/ubuntu questing/universe amd64 nwchem-mpich amd64 7.2.3-7build1 [14.8 MB] 2067s Fetched 88.7 MB in 3s (29.8 MB/s) 2067s Selecting previously unselected package libllvm17t64:amd64. 2067s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80518 files and directories currently installed.) 2067s Preparing to unpack .../00-libllvm17t64_1%3a17.0.6-21_amd64.deb ... 2067s Unpacking libllvm17t64:amd64 (1:17.0.6-21) ... 2068s Selecting previously unselected package libamd-comgr2:amd64. 2068s Preparing to unpack .../01-libamd-comgr2_6.0+git20231212.4510c28+dfsg-3build2_amd64.deb ... 2068s Unpacking libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3build2) ... 2068s Selecting previously unselected package libhsakmt1:amd64. 2068s Preparing to unpack .../02-libhsakmt1_5.7.0-1build1_amd64.deb ... 2068s Unpacking libhsakmt1:amd64 (5.7.0-1build1) ... 2068s Selecting previously unselected package libhsa-runtime64-1. 2068s Preparing to unpack .../03-libhsa-runtime64-1_5.7.1-2build1_amd64.deb ... 2068s Unpacking libhsa-runtime64-1 (5.7.1-2build1) ... 2068s Selecting previously unselected package libamdhip64-5. 2068s Preparing to unpack .../04-libamdhip64-5_5.7.1-5.1_amd64.deb ... 2068s Unpacking libamdhip64-5 (5.7.1-5.1) ... 2068s Selecting previously unselected package libblas3:amd64. 2068s Preparing to unpack .../05-libblas3_3.12.1-2_amd64.deb ... 2068s Unpacking libblas3:amd64 (3.12.1-2) ... 2068s Selecting previously unselected package libevent-pthreads-2.1-7t64:amd64. 2068s Preparing to unpack .../06-libevent-pthreads-2.1-7t64_2.1.12-stable-10_amd64.deb ... 2068s Unpacking libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10) ... 2068s Selecting previously unselected package libpsm-infinipath1. 2068s Preparing to unpack .../07-libpsm-infinipath1_3.3+20.604758e7-6.4_amd64.deb ... 2068s Unpacking libpsm-infinipath1 (3.3+20.604758e7-6.4) ... 2068s Selecting previously unselected package libpsm2-2. 2068s Preparing to unpack .../08-libpsm2-2_11.2.185-2.1_amd64.deb ... 2068s Unpacking libpsm2-2 (11.2.185-2.1) ... 2068s Selecting previously unselected package librdmacm1t64:amd64. 2068s Preparing to unpack .../09-librdmacm1t64_56.0-4ubuntu1_amd64.deb ... 2068s Unpacking librdmacm1t64:amd64 (56.0-4ubuntu1) ... 2068s Selecting previously unselected package libfabric1:amd64. 2068s Preparing to unpack .../10-libfabric1_1.17.0-3.1_amd64.deb ... 2068s Unpacking libfabric1:amd64 (1.17.0-3.1) ... 2068s Selecting previously unselected package libgfortran5:amd64. 2069s Preparing to unpack .../11-libgfortran5_15-20250404-0ubuntu1_amd64.deb ... 2069s Unpacking libgfortran5:amd64 (15-20250404-0ubuntu1) ... 2069s Selecting previously unselected package libgomp1:amd64. 2069s Preparing to unpack .../12-libgomp1_15-20250404-0ubuntu1_amd64.deb ... 2069s Unpacking libgomp1:amd64 (15-20250404-0ubuntu1) ... 2069s Selecting previously unselected package libhwloc15:amd64. 2069s Preparing to unpack .../13-libhwloc15_2.12.0-1_amd64.deb ... 2069s Unpacking libhwloc15:amd64 (2.12.0-1) ... 2069s Selecting previously unselected package liblapack3:amd64. 2069s Preparing to unpack .../14-liblapack3_3.12.1-2_amd64.deb ... 2069s Unpacking liblapack3:amd64 (3.12.1-2) ... 2069s Selecting previously unselected package libmunge2:amd64. 2069s Preparing to unpack .../15-libmunge2_0.5.16-1_amd64.deb ... 2069s Unpacking libmunge2:amd64 (0.5.16-1) ... 2069s Selecting previously unselected package libpciaccess0:amd64. 2069s Preparing to unpack .../16-libpciaccess0_0.17-3build1_amd64.deb ... 2069s Unpacking libpciaccess0:amd64 (0.17-3build1) ... 2069s Selecting previously unselected package libxnvctrl0:amd64. 2069s Preparing to unpack .../17-libxnvctrl0_510.47.03-0ubuntu4_amd64.deb ... 2069s Unpacking libxnvctrl0:amd64 (510.47.03-0ubuntu4) ... 2069s Selecting previously unselected package ocl-icd-libopencl1:amd64. 2069s Preparing to unpack .../18-ocl-icd-libopencl1_2.3.2-1build1_amd64.deb ... 2069s Unpacking ocl-icd-libopencl1:amd64 (2.3.2-1build1) ... 2069s Selecting previously unselected package libhwloc-plugins:amd64. 2069s Preparing to unpack .../19-libhwloc-plugins_2.12.0-1_amd64.deb ... 2069s Unpacking libhwloc-plugins:amd64 (2.12.0-1) ... 2069s Selecting previously unselected package libpmix2t64:amd64. 2069s Preparing to unpack .../20-libpmix2t64_5.0.6-5_amd64.deb ... 2069s Unpacking libpmix2t64:amd64 (5.0.6-5) ... 2069s Selecting previously unselected package libibumad3:amd64. 2069s Preparing to unpack .../21-libibumad3_56.0-4ubuntu1_amd64.deb ... 2069s Unpacking libibumad3:amd64 (56.0-4ubuntu1) ... 2069s Selecting previously unselected package libibmad5:amd64. 2069s Preparing to unpack .../22-libibmad5_56.0-4ubuntu1_amd64.deb ... 2069s Unpacking libibmad5:amd64 (56.0-4ubuntu1) ... 2069s Selecting previously unselected package libucx0:amd64. 2069s Preparing to unpack .../23-libucx0_1.18.1+ds-2_amd64.deb ... 2069s Unpacking libucx0:amd64 (1.18.1+ds-2) ... 2069s Selecting previously unselected package libopenmpi40:amd64. 2069s Preparing to unpack .../24-libopenmpi40_5.0.7-1_amd64.deb ... 2069s Unpacking libopenmpi40:amd64 (5.0.7-1) ... 2069s Selecting previously unselected package openmpi-common. 2069s Preparing to unpack .../25-openmpi-common_5.0.7-1_all.deb ... 2069s Unpacking openmpi-common (5.0.7-1) ... 2069s Selecting previously unselected package openmpi-bin. 2069s Preparing to unpack .../26-openmpi-bin_5.0.7-1_amd64.deb ... 2069s Unpacking openmpi-bin (5.0.7-1) ... 2069s Selecting previously unselected package mpi-default-bin. 2069s Preparing to unpack .../27-mpi-default-bin_1.18_amd64.deb ... 2069s Unpacking mpi-default-bin (1.18) ... 2069s Selecting previously unselected package libmpich12:amd64. 2069s Preparing to unpack .../28-libmpich12_4.3.0-5_amd64.deb ... 2069s Unpacking libmpich12:amd64 (4.3.0-5) ... 2069s Selecting previously unselected package libscalapack-mpich2.2:amd64. 2069s Preparing to unpack .../29-libscalapack-mpich2.2_2.2.2-1ubuntu1_amd64.deb ... 2069s Unpacking libscalapack-mpich2.2:amd64 (2.2.2-1ubuntu1) ... 2069s Selecting previously unselected package libslurm42t64. 2069s Preparing to unpack .../30-libslurm42t64_24.11.3-2_amd64.deb ... 2069s Unpacking libslurm42t64 (24.11.3-2) ... 2070s Selecting previously unselected package nwchem-data. 2070s Preparing to unpack .../31-nwchem-data_7.2.3-7build1_all.deb ... 2070s Unpacking nwchem-data (7.2.3-7build1) ... 2070s Selecting previously unselected package hwloc-nox. 2070s Preparing to unpack .../32-hwloc-nox_2.12.0-1_amd64.deb ... 2070s Unpacking hwloc-nox (2.12.0-1) ... 2070s Selecting previously unselected package mpich. 2070s Preparing to unpack .../33-mpich_4.3.0-5_amd64.deb ... 2070s Unpacking mpich (4.3.0-5) ... 2070s Selecting previously unselected package nwchem-mpich. 2070s Preparing to unpack .../34-nwchem-mpich_7.2.3-7build1_amd64.deb ... 2070s Unpacking nwchem-mpich (7.2.3-7build1) ... 2070s Setting up libpciaccess0:amd64 (0.17-3build1) ... 2070s Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10) ... 2070s Setting up nwchem-data (7.2.3-7build1) ... 2070s Setting up libibumad3:amd64 (56.0-4ubuntu1) ... 2070s Setting up libibmad5:amd64 (56.0-4ubuntu1) ... 2070s Setting up libgomp1:amd64 (15-20250404-0ubuntu1) ... 2070s Setting up libxnvctrl0:amd64 (510.47.03-0ubuntu4) ... 2070s Setting up libblas3:amd64 (3.12.1-2) ... 2070s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 2070s Setting up libmunge2:amd64 (0.5.16-1) ... 2070s Setting up libllvm17t64:amd64 (1:17.0.6-21) ... 2070s Setting up libslurm42t64 (24.11.3-2) ... 2070s Setting up libhwloc15:amd64 (2.12.0-1) ... 2070s Setting up libgfortran5:amd64 (15-20250404-0ubuntu1) ... 2070s Setting up ocl-icd-libopencl1:amd64 (2.3.2-1build1) ... 2070s Setting up libpsm2-2 (11.2.185-2.1) ... 2070s Setting up openmpi-common (5.0.7-1) ... 2070s Setting up librdmacm1t64:amd64 (56.0-4ubuntu1) ... 2070s Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3build2) ... 2070s Setting up libpsm-infinipath1 (3.3+20.604758e7-6.4) ... 2070s update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode 2070s Setting up libhsakmt1:amd64 (5.7.0-1build1) ... 2070s Setting up libfabric1:amd64 (1.17.0-3.1) ... 2070s Setting up liblapack3:amd64 (3.12.1-2) ... 2070s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 2070s Setting up hwloc-nox (2.12.0-1) ... 2070s Setting up libhwloc-plugins:amd64 (2.12.0-1) ... 2070s Setting up libpmix2t64:amd64 (5.0.6-5) ... 2070s Setting up libhsa-runtime64-1 (5.7.1-2build1) ... 2070s Setting up libamdhip64-5 (5.7.1-5.1) ... 2070s Setting up libucx0:amd64 (1.18.1+ds-2) ... 2070s Setting up libmpich12:amd64 (4.3.0-5) ... 2070s Setting up libopenmpi40:amd64 (5.0.7-1) ... 2070s Setting up mpich (4.3.0-5) ... 2070s update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode 2070s update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode 2070s Setting up openmpi-bin (5.0.7-1) ... 2070s update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode 2070s update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist 2070s update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode 2070s Setting up mpi-default-bin (1.18) ... 2070s Setting up libscalapack-mpich2.2:amd64 (2.2.2-1ubuntu1) ... 2070s Setting up nwchem-mpich (7.2.3-7build1) ... 2070s Processing triggers for libc-bin (2.41-6ubuntu1) ... 2071s Processing triggers for man-db (2.13.0-1) ... 2179s autopkgtest [19:22:54]: test testsuite-mpich: [----------------------- 2179s ===== TESTING NWCHEM BUILD FOR mpich ===== 2179s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 2179s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 2179s 2179s 2179s Running tests/dft_he2+/dft_he2+ 2179s 2179s cleaning scratch 2179s copying input and verified output files 2179s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2179s 2191s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2191s OK 2191s 2191s Running tests/qmmm_grad0/qmmm_grad0 2191s 2191s cleaning scratch 2191s copying input and verified output files 2191s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2191s 2196s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2196s OK 2196s 2196s Running tests/auh2o/auh2o 2196s 2196s cleaning scratch 2196s copying input and verified output files 2196s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2196s 2198s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2198s OK 2198s 2198s Running tests/autosym/autosym 2198s 2198s cleaning scratch 2198s copying input and verified output files 2198s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2198s 2209s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2209s OK 2209s 2209s Running tests/h2mp2/h2mp2 2209s 2209s cleaning scratch 2209s copying input and verified output files 2209s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2209s 2212s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2212s OK 2212s 2212s Running tests/h2o/h2o 2212s 2212s cleaning scratch 2212s copying input and verified output files 2212s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2212s 2213s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2213s OK 2213s 2213s Running tests/hess_h2o/hess_h2o 2213s 2213s cleaning scratch 2213s copying input and verified output files 2213s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2213s 2219s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2219s OK 2219s 2219s Running tests/prop_h2o/prop_h2o 2219s 2219s cleaning scratch 2219s copying input and verified output files 2219s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2219s 2223s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2223s OK 2223s 2223s Running tests/geom_zmatrix/geom_zmatrix 2223s 2223s cleaning scratch 2223s copying input and verified output files 2223s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2223s 2227s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2227s OK 2227s 2227s Running tests/rimp2_ne/rimp2_ne 2227s 2227s cleaning scratch 2227s copying input and verified output files 2227s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2227s 2230s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2230s OK 2230s 2230s Running tests/small_intchk/small_intchk 2230s 2230s cleaning scratch 2230s copying input and verified output files 2230s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2230s 2236s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2236s OK 2236s 2236s Running tests/tagcheck/tagcheck 2236s 2236s cleaning scratch 2236s copying input and verified output files 2236s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2236s 2239s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2239s OK 2239s 2239s Running tests/testtab/testtab 2239s 2239s cleaning scratch 2239s copying input and verified output files 2239s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2239s 2240s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2240s OK 2240s 2240s Running tests/h2o_dk/h2o_dk 2240s 2240s cleaning scratch 2240s copying input and verified output files 2240s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2240s 2247s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2247s OK 2247s 2247s Running tests/cosmo_h2o/cosmo_h2o 2247s 2247s cleaning scratch 2247s copying input and verified output files 2247s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2247s 2249s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2249s OK 2249s 2249s Running tests/ch5n_nbo/ch5n_nbo 2249s 2249s cleaning scratch 2249s copying input and verified output files 2249s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2249s 2250s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2250s OK 2250s 2250s Running tests/h2s_finite/h2s_finite 2250s 2250s cleaning scratch 2250s copying input and verified output files 2250s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2250s 2254s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2254s OK 2254s 2254s Running tests/pyqa3/pyqa3 2254s 2254s cleaning scratch 2254s copying input and verified output files 2254s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2254s 2257s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2257s OK 2257s 2257s Running tests/startag/startag 2257s 2257s cleaning scratch 2257s copying input and verified output files 2257s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2257s 2259s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2259s OK 2259s 2259s Running tests/esp/esp 2259s 2259s cleaning scratch 2259s copying input and verified output files 2259s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2259s 2261s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2261s ESP charges match 2261s 2261s 2261s Running tests/esp_uhf/esp_uhf 2261s 2261s cleaning scratch 2261s copying input and verified output files 2261s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2261s 2265s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2265s ESP charges match 2265s 2265s 2265s Running tests/dft_bsse/dft_bsse 2265s 2265s cleaning scratch 2265s copying input and verified output files 2265s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2265s 2269s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2269s OK 2269s 2269s Running tests/dplot_dft/dplot_dft 2269s 2269s cleaning scratch 2269s copying input and verified output files 2269s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2269s 2270s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2270s OK 2270s 2270s Running tests/dft_meta/dft_meta 2270s 2270s cleaning scratch 2270s copying input and verified output files 2270s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2270s 2314s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2314s OK 2314s 2314s Running tests/dft_mpwb1khf/dft_mpwb1khf 2314s 2314s cleaning scratch 2314s copying input and verified output files 2314s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2314s 2317s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2317s OK 2317s 2317s Running tests/prop_uhf_h2o/prop_uhf_h2o 2317s 2317s cleaning scratch 2317s copying input and verified output files 2317s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2317s 2333s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2333s OK 2333s 2333s Running tests/et_zn_dimer/et_zn_dimer 2333s 2333s cleaning scratch 2333s copying input and verified output files 2333s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2333s 2352s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2352s OK 2352s 2352s Running tests/vectors_rotate/vectors_rotate 2352s 2352s cleaning scratch 2352s copying input and verified output files 2352s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2352s 2355s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2355s OK 2355s 2355s Running tests/sad_ch3hf/sad_ch3hf 2355s 2355s cleaning scratch 2355s copying input and verified output files 2355s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2355s 2368s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2368s OK 2368s 2368s Running tests/band/band 2368s 2368s cleaning scratch 2368s copying input and verified output files 2368s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2368s 2375s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2375s OK 2375s 2375s Running tests/pspw/pspw 2375s 2375s cleaning scratch 2375s copying input and verified output files 2375s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2375s 2386s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2386s OK 2386s 2386s Running tests/pspw_stress/pspw_stress 2386s 2386s cleaning scratch 2386s copying input and verified output files 2386s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2386s 2400s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2400s OK 2400s 2400s Running tests/mcscf_ch2/mcscf_ch2 2400s 2400s cleaning scratch 2400s copying input and verified output files 2400s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2400s 2421s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2421s OK 2421s 2421s Running tests/dft_li2freq/dft_li2freq 2421s 2421s cleaning scratch 2421s copying input and verified output files 2421s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2421s 2471s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2471s OK 2471s 2471s Running tests/n2_ccsd/n2_ccsd 2471s 2471s cleaning scratch 2471s copying input and verified output files 2471s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2471s 2510s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2510s OK 2510s 2510s Running tests/tce_ccsd_t_h2o/tce_ccsd_t_h2o 2510s 2510s cleaning scratch 2510s copying input and verified output files 2510s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2510s 2513s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2513s OK 2513s 2513s Running tests/tddft_h2o/tddft_h2o 2513s 2513s cleaning scratch 2513s copying input and verified output files 2513s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2513s 2544s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2544s OK 2544s 2544s Running tests/rt_tddft_dimer_charge/rt_tddft_dimer_charge 2544s 2544s cleaning scratch 2544s copying input and verified output files 2544s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2544s 2793s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2793s OK 2793s 2793s Running tests/tce_eaccsd_ozone/tce_eaccsd_ozone 2793s 2793s cleaning scratch 2793s copying input and verified output files 2793s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2793s 2808s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2808s OK 2808s 2808s Running tests/tce_ipccsd_f2/tce_ipccsd_f2 2808s 2808s cleaning scratch 2808s copying input and verified output files 2808s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2808s 2812s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2812s OK 2812s 2812s Running tests/tce_hyperpolar_ccsd_small/tce_hyperpolar_ccsd_small 2812s 2812s cleaning scratch 2812s copying input and verified output files 2812s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2812s 2906s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2906s OK 2906s 2906s Running tests/mp2_scs_n2/mp2_scs_n2 2906s 2906s cleaning scratch 2906s copying input and verified output files 2906s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2906s 2922s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2922s OK 2922s 2922s Running tests/tddftgrad_n2_uks/tddftgrad_n2_uks 2922s 2922s cleaning scratch 2922s copying input and verified output files 2922s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2922s 2957s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2957s OK 2957s 2957s Running tests/tddftgrad_ch2o/tddftgrad_ch2o 2957s 2957s cleaning scratch 2957s copying input and verified output files 2957s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2957s 2967s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2967s OK 2967s 2967s Running tests/water/water_md 2967s 2967s cleaning scratch 2967s copying input and verified output files 2967s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2967s 2968s verifying nwout ...... skipped 2968s verifying test ....... completed 2968s 2968s Running tests/water/water_pme 2968s 2968s cleaning scratch 2968s copying input and verified output files 2968s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2968s 2968s verifying nwout ...... skipped 2968s verifying test ....... completed 2968s 2968s Running tests/pspw_md/pspw_md 2968s 2968s cleaning scratch 2968s copying input and verified output files 2968s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2968s 2980s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2980s OK 2980s 2980s Running tests/cosmo_h3co/cosmo_h3co 2980s 2980s cleaning scratch 2980s copying input and verified output files 2980s running nwchem (/usr/bin/nwchem.mpich) with 1 processors 2980s 2989s verifying output ... [0] ARMCI Warning: Freed 1 leaked allocations 2989s OK 2989s 2989s OK 2990s autopkgtest [19:36:25]: test testsuite-mpich: -----------------------] 2990s testsuite-mpich PASS 2990s autopkgtest [19:36:25]: test testsuite-mpich: - - - - - - - - - - results - - - - - - - - - - 2990s autopkgtest [19:36:25]: @@@@@@@@@@@@@@@@@@@@ summary 2990s testsuite.sh PASS 2990s testsuite-openmpi PASS 2990s testsuite-mpich PASS 3010s nova [W] Skipping flock for amd64 3010s Creating nova instance adt-questing-amd64-nwchem-20250503-184635-juju-7f2275-prod-proposed-migration-environment-20-359b6746-b870-43fc-9ac5-d009cc585fdd from image adt/ubuntu-questing-amd64-server-20250503.img (UUID 57b7c1b6-ad80-4bdb-b031-36f045f7f3b3)... 3010s nova [W] Timed out waiting for af0d11aa-c7c4-4dee-872c-7a12df4582a6 to get deleted. 3010s nova [W] Skipping flock for amd64 3010s Creating nova instance adt-questing-amd64-nwchem-20250503-184635-juju-7f2275-prod-proposed-migration-environment-20-359b6746-b870-43fc-9ac5-d009cc585fdd from image adt/ubuntu-questing-amd64-server-20250503.img (UUID 57b7c1b6-ad80-4bdb-b031-36f045f7f3b3)... 3010s nova [W] Timed out waiting for 1574b164-7cbe-4463-aaf3-474ac1694ca7 to get deleted. 3010s nova [W] Skipping flock for amd64 3010s Creating nova instance adt-questing-amd64-nwchem-20250503-184635-juju-7f2275-prod-proposed-migration-environment-20-359b6746-b870-43fc-9ac5-d009cc585fdd from image adt/ubuntu-questing-amd64-server-20250503.img (UUID 57b7c1b6-ad80-4bdb-b031-36f045f7f3b3)... 3010s nova [W] Timed out waiting for fd2c9d42-0381-4d3c-a4d8-3473afaefb51 to get deleted.