0s autopkgtest [11:45:06]: starting date and time: 2025-05-06 11:45:06+0000 0s autopkgtest [11:45:06]: git checkout: 9986aa8c Merge branch 'skia/fix_network_interface' into 'ubuntu/production' 0s autopkgtest [11:45:06]: host juju-7f2275-prod-proposed-migration-environment-23; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.x97l4fto/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:sphinx --apt-upgrade nipype --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=sphinx/8.2.3-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor builder-cpu2-ram4-disk20 --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-23@bos03-3.secgroup --name adt-questing-amd64-nipype-20250506-114506-juju-7f2275-prod-proposed-migration-environment-23-7b699953-e450-4469-ae2e-a517a4599201 --image adt/ubuntu-questing-amd64-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-23 --net-id=net_prod-proposed-migration-amd64 -e TERM=linux --mirror=http://ftpmaster.internal/ubuntu/ 51s autopkgtest [11:45:57]: testbed dpkg architecture: amd64 52s autopkgtest [11:45:58]: testbed apt version: 3.0.0 52s autopkgtest [11:45:58]: @@@@@@@@@@@@@@@@@@@@ test bed setup 52s autopkgtest [11:45:58]: testbed release detected to be: None 53s autopkgtest [11:45:59]: updating testbed package index (apt update) 53s Get:1 http://ftpmaster.internal/ubuntu questing-proposed InRelease [110 kB] 53s Hit:2 http://ftpmaster.internal/ubuntu questing InRelease 53s Hit:3 http://ftpmaster.internal/ubuntu questing-updates InRelease 53s Hit:4 http://ftpmaster.internal/ubuntu questing-security InRelease 54s Get:5 http://ftpmaster.internal/ubuntu questing-proposed/multiverse Sources [27.3 kB] 54s Get:6 http://ftpmaster.internal/ubuntu questing-proposed/universe Sources [595 kB] 54s Get:7 http://ftpmaster.internal/ubuntu questing-proposed/main Sources [72.4 kB] 54s Get:8 http://ftpmaster.internal/ubuntu questing-proposed/main i386 Packages [106 kB] 54s Get:9 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 Packages [150 kB] 54s Get:10 http://ftpmaster.internal/ubuntu questing-proposed/universe amd64 Packages [669 kB] 54s Get:11 http://ftpmaster.internal/ubuntu questing-proposed/universe i386 Packages [264 kB] 54s Get:12 http://ftpmaster.internal/ubuntu questing-proposed/multiverse i386 Packages [5028 B] 54s Get:13 http://ftpmaster.internal/ubuntu questing-proposed/multiverse amd64 Packages [18.4 kB] 54s Fetched 2018 kB in 1s (2292 kB/s) 55s Reading package lists... 55s autopkgtest [11:46:01]: upgrading testbed (apt dist-upgrade and autopurge) 55s Reading package lists... 56s Building dependency tree... 56s Reading state information... 56s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 56s Starting 2 pkgProblemResolver with broken count: 0 56s Done 57s Entering ResolveByKeep 57s 57s Calculating upgrade... 57s The following packages will be upgraded: 57s libperl5.40 perl perl-base perl-modules-5.40 python3-dbus 58s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 58s Need to get 10.3 MB of archives. 58s After this operation, 5120 B of additional disk space will be used. 58s Get:1 http://ftpmaster.internal/ubuntu questing/main amd64 libperl5.40 amd64 5.40.1-3 [4877 kB] 58s Get:2 http://ftpmaster.internal/ubuntu questing/main amd64 perl amd64 5.40.1-3 [262 kB] 58s Get:3 http://ftpmaster.internal/ubuntu questing/main amd64 perl-base amd64 5.40.1-3 [1840 kB] 58s Get:4 http://ftpmaster.internal/ubuntu questing/main amd64 perl-modules-5.40 all 5.40.1-3 [3217 kB] 58s Get:5 http://ftpmaster.internal/ubuntu questing/main amd64 python3-dbus amd64 1.4.0-1 [102 kB] 59s Fetched 10.3 MB in 1s (10.5 MB/s) 59s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80527 files and directories currently installed.) 59s Preparing to unpack .../libperl5.40_5.40.1-3_amd64.deb ... 59s Unpacking libperl5.40:amd64 (5.40.1-3) over (5.40.1-2) ... 59s Preparing to unpack .../perl_5.40.1-3_amd64.deb ... 59s Unpacking perl (5.40.1-3) over (5.40.1-2) ... 60s Preparing to unpack .../perl-base_5.40.1-3_amd64.deb ... 60s Unpacking perl-base (5.40.1-3) over (5.40.1-2) ... 60s Setting up perl-base (5.40.1-3) ... 60s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80527 files and directories currently installed.) 60s Preparing to unpack .../perl-modules-5.40_5.40.1-3_all.deb ... 60s Unpacking perl-modules-5.40 (5.40.1-3) over (5.40.1-2) ... 60s Preparing to unpack .../python3-dbus_1.4.0-1_amd64.deb ... 60s Unpacking python3-dbus (1.4.0-1) over (1.3.2-5build5) ... 60s Setting up python3-dbus (1.4.0-1) ... 61s Setting up perl-modules-5.40 (5.40.1-3) ... 61s Setting up libperl5.40:amd64 (5.40.1-3) ... 61s Setting up perl (5.40.1-3) ... 61s Processing triggers for man-db (2.13.1-1) ... 61s Processing triggers for libc-bin (2.41-6ubuntu1) ... 62s Reading package lists... 62s Building dependency tree... 62s Reading state information... 63s Starting pkgProblemResolver with broken count: 0 63s Starting 2 pkgProblemResolver with broken count: 0 63s Done 63s Solving dependencies... 63s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 66s autopkgtest [11:46:12]: testbed running kernel: Linux 6.14.0-15-generic #15-Ubuntu SMP PREEMPT_DYNAMIC Sun Apr 6 15:05:05 UTC 2025 66s autopkgtest [11:46:12]: @@@@@@@@@@@@@@@@@@@@ apt-source nipype 69s Get:1 http://ftpmaster.internal/ubuntu questing/universe nipype 1.9.2-2 (dsc) [2869 B] 69s Get:2 http://ftpmaster.internal/ubuntu questing/universe nipype 1.9.2-2 (tar) [2922 kB] 69s Get:3 http://ftpmaster.internal/ubuntu questing/universe nipype 1.9.2-2 (diff) [18.9 kB] 69s gpgv: Signature made Fri Feb 21 20:45:09 2025 UTC 69s gpgv: using RSA key 8F6DE104377F3B11E741748731F3144544A1741A 69s gpgv: issuer "tchet@debian.org" 69s gpgv: Can't check signature: No public key 69s dpkg-source: warning: cannot verify inline signature for ./nipype_1.9.2-2.dsc: no acceptable signature found 71s autopkgtest [11:46:17]: testing package nipype version 1.9.2-2 71s autopkgtest [11:46:17]: build not needed 75s autopkgtest [11:46:21]: test run-unit-test: preparing testbed 75s Reading package lists... 75s Building dependency tree... 75s Reading state information... 76s Starting pkgProblemResolver with broken count: 0 76s Starting 2 pkgProblemResolver with broken count: 0 76s Done 76s The following NEW packages will be installed: 76s diffstat docutils-common fontconfig fontconfig-config fonts-dejavu-core 76s fonts-dejavu-mono gettext graphviz libaec0 libann0 libaom3 libblas3 76s libcairo2 libcdt5 libcgraph6 libdatrie1 libde265-0 libdeflate0 76s libfontconfig1 libgd3 libgfortran5 libgomp1 libgraphite2-3 libgts-0.7-5t64 76s libgvc6 libgvpr2 libharfbuzz0b libhdf5-310 libhdf5-hl-310 76s libheif-plugin-aomdec libheif-plugin-libde265 libheif1 libice6 76s libimagequant0 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-sphinxdoc 76s libjs-underscore libjson-perl liblab-gamut1 liblapack3 liblbfgsb0 liblerc4 76s libltdl7 liblzf1 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 76s libpathplan4 libpixman-1-0 libsharpyuv0 libsm6 libsz2 libthai-data libthai0 76s libtiff6 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 libxmu6 libxpm4 76s libxrender1 libxslt1.1 libxt6t64 python-nipype-doc python3-alabaster 76s python3-all python3-ci-info python3-click python3-decorator python3-deepdiff 76s python3-defusedxml python3-dipy python3-dipy-lib python3-docutils 76s python3-etelemetry python3-execnet python3-filelock python3-h5py 76s python3-h5py-serial python3-imagesize python3-iniconfig python3-jsonpickle 76s python3-looseversion python3-lxml python3-networkx python3-nibabel 76s python3-nipype python3-numpy python3-numpy-dev python3-orderly-set 76s python3-pandas python3-pandas-lib python3-pluggy python3-prov python3-psutil 76s python3-puremagic python3-pydot python3-pytest python3-pytest-xdist 76s python3-pytz python3-rdflib python3-roman python3-roman-numerals 76s python3-scipy python3-setuptools-scm python3-simplejson 76s python3-snowballstemmer python3-sphinx python3-tqdm python3-traits 76s python3-trx-python python3-tz quilt sgml-base sphinx-common x11-common 76s xml-core 76s 0 upgraded, 121 newly installed, 0 to remove and 0 not upgraded. 76s Need to get 87.6 MB of archives. 76s After this operation, 383 MB of additional disk space will be used. 76s Get:1 http://ftpmaster.internal/ubuntu questing/main amd64 python3-numpy-dev amd64 1:2.2.4+ds-1 [147 kB] 77s Get:2 http://ftpmaster.internal/ubuntu questing/main amd64 libblas3 amd64 3.12.1-2 [359 kB] 77s Get:3 http://ftpmaster.internal/ubuntu questing/main amd64 libgfortran5 amd64 15-20250404-0ubuntu1 [926 kB] 77s Get:4 http://ftpmaster.internal/ubuntu questing/main amd64 liblapack3 amd64 3.12.1-2 [3179 kB] 77s Get:5 http://ftpmaster.internal/ubuntu questing/main amd64 python3-numpy amd64 1:2.2.4+ds-1 [5383 kB] 77s Get:6 http://ftpmaster.internal/ubuntu questing/main amd64 diffstat amd64 1.67-1 [33.1 kB] 77s Get:7 http://ftpmaster.internal/ubuntu questing/main amd64 sgml-base all 1.31+nmu1 [11.0 kB] 77s Get:8 http://ftpmaster.internal/ubuntu questing/main amd64 xml-core all 0.19 [20.3 kB] 77s Get:9 http://ftpmaster.internal/ubuntu questing/main amd64 docutils-common all 0.21.2+dfsg-2 [131 kB] 77s Get:10 http://ftpmaster.internal/ubuntu questing/main amd64 fonts-dejavu-mono all 2.37-8 [502 kB] 77s Get:11 http://ftpmaster.internal/ubuntu questing/main amd64 fonts-dejavu-core all 2.37-8 [835 kB] 77s Get:12 http://ftpmaster.internal/ubuntu questing/main amd64 fontconfig-config amd64 2.15.0-2.2ubuntu1 [37.8 kB] 77s Get:13 http://ftpmaster.internal/ubuntu questing/main amd64 libfontconfig1 amd64 2.15.0-2.2ubuntu1 [164 kB] 77s Get:14 http://ftpmaster.internal/ubuntu questing/main amd64 fontconfig amd64 2.15.0-2.2ubuntu1 [180 kB] 77s Get:15 http://ftpmaster.internal/ubuntu questing/main amd64 libgomp1 amd64 15-20250404-0ubuntu1 [151 kB] 77s Get:16 http://ftpmaster.internal/ubuntu questing/main amd64 gettext amd64 0.23.1-2 [1017 kB] 77s Get:17 http://ftpmaster.internal/ubuntu questing/universe amd64 libann0 amd64 1.1.2+doc-9build1 [25.5 kB] 77s Get:18 http://ftpmaster.internal/ubuntu questing/universe amd64 libcdt5 amd64 2.42.4-3 [23.7 kB] 77s Get:19 http://ftpmaster.internal/ubuntu questing/universe amd64 libcgraph6 amd64 2.42.4-3 [48.0 kB] 77s Get:20 http://ftpmaster.internal/ubuntu questing/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [25.9 kB] 77s Get:21 http://ftpmaster.internal/ubuntu questing/main amd64 libaom3 amd64 3.12.1-1 [1944 kB] 77s Get:22 http://ftpmaster.internal/ubuntu questing/main amd64 libheif-plugin-aomdec amd64 1.19.8-1 [11.6 kB] 77s Get:23 http://ftpmaster.internal/ubuntu questing/main amd64 libde265-0 amd64 1.0.15-1build5 [285 kB] 77s Get:24 http://ftpmaster.internal/ubuntu questing/main amd64 libheif-plugin-libde265 amd64 1.19.8-1 [9062 B] 77s Get:25 http://ftpmaster.internal/ubuntu questing/main amd64 libheif1 amd64 1.19.8-1 [398 kB] 77s Get:26 http://ftpmaster.internal/ubuntu questing/main amd64 libimagequant0 amd64 2.18.0-1build1 [36.3 kB] 77s Get:27 http://ftpmaster.internal/ubuntu questing/main amd64 libjpeg-turbo8 amd64 2.1.5-3ubuntu2 [179 kB] 77s Get:28 http://ftpmaster.internal/ubuntu questing/main amd64 libjpeg8 amd64 8c-2ubuntu11 [2148 B] 77s Get:29 http://ftpmaster.internal/ubuntu questing/main amd64 libdeflate0 amd64 1.23-2 [49.9 kB] 77s Get:30 http://ftpmaster.internal/ubuntu questing/main amd64 libjbig0 amd64 2.1-6.1ubuntu2 [29.7 kB] 77s Get:31 http://ftpmaster.internal/ubuntu questing/main amd64 liblerc4 amd64 4.0.0+ds-5ubuntu1 [271 kB] 77s Get:32 http://ftpmaster.internal/ubuntu questing/main amd64 libwebp7 amd64 1.5.0-0.1 [378 kB] 77s Get:33 http://ftpmaster.internal/ubuntu questing/main amd64 libtiff6 amd64 4.7.0-3ubuntu1 [204 kB] 77s Get:34 http://ftpmaster.internal/ubuntu questing/main amd64 libxpm4 amd64 1:3.5.17-1build2 [36.5 kB] 77s Get:35 http://ftpmaster.internal/ubuntu questing/main amd64 libgd3 amd64 2.3.3-13ubuntu1 [130 kB] 77s Get:36 http://ftpmaster.internal/ubuntu questing/universe amd64 libgts-0.7-5t64 amd64 0.7.6+darcs121130-5.2build1 [161 kB] 77s Get:37 http://ftpmaster.internal/ubuntu questing/main amd64 libpixman-1-0 amd64 0.44.0-3 [427 kB] 77s Get:38 http://ftpmaster.internal/ubuntu questing/main amd64 libxcb-render0 amd64 1.17.0-2 [16.2 kB] 77s Get:39 http://ftpmaster.internal/ubuntu questing/main amd64 libxcb-shm0 amd64 1.17.0-2 [5758 B] 77s Get:40 http://ftpmaster.internal/ubuntu questing/main amd64 libxrender1 amd64 1:0.9.12-1 [19.8 kB] 77s Get:41 http://ftpmaster.internal/ubuntu questing/main amd64 libcairo2 amd64 1.18.4-1 [662 kB] 77s Get:42 http://ftpmaster.internal/ubuntu questing/main amd64 libltdl7 amd64 2.5.4-4 [46.5 kB] 77s Get:43 http://ftpmaster.internal/ubuntu questing/main amd64 libgraphite2-3 amd64 1.3.14-2ubuntu1 [73.1 kB] 77s Get:44 http://ftpmaster.internal/ubuntu questing/main amd64 libharfbuzz0b amd64 10.2.0-1 [543 kB] 77s Get:45 http://ftpmaster.internal/ubuntu questing/main amd64 libthai-data all 0.1.29-2build1 [158 kB] 78s Get:46 http://ftpmaster.internal/ubuntu questing/main amd64 libdatrie1 amd64 0.2.13-3build1 [19.0 kB] 78s Get:47 http://ftpmaster.internal/ubuntu questing/main amd64 libthai0 amd64 0.1.29-2build1 [18.9 kB] 78s Get:48 http://ftpmaster.internal/ubuntu questing/main amd64 libpango-1.0-0 amd64 1.56.3-1 [256 kB] 78s Get:49 http://ftpmaster.internal/ubuntu questing/main amd64 libpangoft2-1.0-0 amd64 1.56.3-1 [52.9 kB] 78s Get:50 http://ftpmaster.internal/ubuntu questing/main amd64 libpangocairo-1.0-0 amd64 1.56.3-1 [29.1 kB] 78s Get:51 http://ftpmaster.internal/ubuntu questing/universe amd64 libpathplan4 amd64 2.42.4-3 [27.0 kB] 78s Get:52 http://ftpmaster.internal/ubuntu questing/universe amd64 libgvc6 amd64 2.42.4-3 [818 kB] 78s Get:53 http://ftpmaster.internal/ubuntu questing/universe amd64 libgvpr2 amd64 2.42.4-3 [197 kB] 78s Get:54 http://ftpmaster.internal/ubuntu questing/universe amd64 liblab-gamut1 amd64 2.42.4-3 [1858 kB] 78s Get:55 http://ftpmaster.internal/ubuntu questing/main amd64 x11-common all 1:7.7+23ubuntu4 [21.8 kB] 78s Get:56 http://ftpmaster.internal/ubuntu questing/main amd64 libice6 amd64 2:1.1.1-1 [44.1 kB] 78s Get:57 http://ftpmaster.internal/ubuntu questing/main amd64 libsm6 amd64 2:1.2.6-1 [16.4 kB] 78s Get:58 http://ftpmaster.internal/ubuntu questing/main amd64 libxt6t64 amd64 1:1.2.1-1.2build1 [171 kB] 78s Get:59 http://ftpmaster.internal/ubuntu questing/main amd64 libxmu6 amd64 2:1.1.3-3build2 [47.6 kB] 78s Get:60 http://ftpmaster.internal/ubuntu questing/main amd64 libxaw7 amd64 2:1.0.16-1 [207 kB] 78s Get:61 http://ftpmaster.internal/ubuntu questing/universe amd64 graphviz amd64 2.42.4-3 [743 kB] 78s Get:62 http://ftpmaster.internal/ubuntu questing/universe amd64 libaec0 amd64 1.1.3-1 [22.7 kB] 78s Get:63 http://ftpmaster.internal/ubuntu questing/universe amd64 libsz2 amd64 1.1.3-1 [5456 B] 78s Get:64 http://ftpmaster.internal/ubuntu questing/universe amd64 libhdf5-310 amd64 1.14.5+repack-3 [1519 kB] 78s Get:65 http://ftpmaster.internal/ubuntu questing/universe amd64 libhdf5-hl-310 amd64 1.14.5+repack-3 [62.6 kB] 78s Get:66 http://ftpmaster.internal/ubuntu questing/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 78s Get:67 http://ftpmaster.internal/ubuntu questing/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] 78s Get:68 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 libjs-sphinxdoc all 8.2.3-1 [27.8 kB] 78s Get:69 http://ftpmaster.internal/ubuntu questing/main amd64 libjson-perl all 4.10000-1 [81.9 kB] 78s Get:70 http://ftpmaster.internal/ubuntu questing/universe amd64 liblbfgsb0 amd64 3.0+dfsg.4-1build1 [29.9 kB] 78s Get:71 http://ftpmaster.internal/ubuntu questing/universe amd64 liblzf1 amd64 3.6-4 [7624 B] 78s Get:72 http://ftpmaster.internal/ubuntu questing/main amd64 libxslt1.1 amd64 1.1.39-0exp1ubuntu4 [176 kB] 78s Get:73 http://ftpmaster.internal/ubuntu questing/universe amd64 python-nipype-doc all 1.9.2-2 [1247 kB] 78s Get:74 http://ftpmaster.internal/ubuntu questing/main amd64 python3-all amd64 3.13.3-1 [882 B] 78s Get:75 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-ci-info all 0.3.0-1 [7396 B] 78s Get:76 http://ftpmaster.internal/ubuntu questing/main amd64 python3-click all 8.2.0+0.really.8.1.8-1 [80.0 kB] 78s Get:77 http://ftpmaster.internal/ubuntu questing/main amd64 python3-decorator all 5.2.1-2 [28.1 kB] 78s Get:78 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-jsonpickle all 4.0.2+dfsg-2 [40.1 kB] 78s Get:79 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-orderly-set all 5.3.2-1 [14.3 kB] 78s Get:80 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-deepdiff all 8.1.1-3 [70.0 kB] 78s Get:81 http://ftpmaster.internal/ubuntu questing/main amd64 python3-defusedxml all 0.7.1-3 [42.2 kB] 78s Get:82 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-h5py-serial amd64 3.13.0-1 [1230 kB] 78s Get:83 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-h5py all 3.13.0-1 [7978 B] 78s Get:84 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-scipy amd64 1.14.1-4ubuntu2 [18.7 MB] 79s Get:85 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-nibabel all 5.3.2-2 [2701 kB] 79s Get:86 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-tqdm all 4.67.1-3 [91.6 kB] 79s Get:87 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-setuptools-scm all 8.2.1-1 [32.6 kB] 79s Get:88 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-trx-python all 0.3-1 [40.8 kB] 79s Get:89 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-dipy-lib amd64 1.11.0-2 [2696 kB] 79s Get:90 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-dipy all 1.11.0-2 [3622 kB] 79s Get:91 http://ftpmaster.internal/ubuntu questing/main amd64 python3-roman all 5.0-1 [10.3 kB] 79s Get:92 http://ftpmaster.internal/ubuntu questing/main amd64 python3-docutils all 0.21.2+dfsg-2 [409 kB] 79s Get:93 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-etelemetry all 0.3.1-1 [7326 B] 79s Get:94 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-execnet all 2.1.1-1 [33.4 kB] 79s Get:95 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-filelock all 3.18.0-1 [13.0 kB] 79s Get:96 http://ftpmaster.internal/ubuntu questing/main amd64 python3-imagesize all 1.4.1-1 [6844 B] 79s Get:97 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-iniconfig all 1.1.1-2 [6024 B] 79s Get:98 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-looseversion all 1.3.0-3 [8354 B] 79s Get:99 http://ftpmaster.internal/ubuntu questing/main amd64 python3-lxml amd64 5.4.0-1 [1342 kB] 79s Get:100 http://ftpmaster.internal/ubuntu questing/main amd64 python3-networkx all 3.2.1-4ubuntu1 [11.5 MB] 79s Get:101 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-rdflib all 7.1.1-2 [426 kB] 79s Get:102 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-prov all 2.0.1-1 [95.5 kB] 79s Get:103 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-puremagic all 1.28-1 [39.3 kB] 79s Get:104 http://ftpmaster.internal/ubuntu questing/main amd64 python3-simplejson amd64 3.20.1-1 [56.5 kB] 80s Get:105 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-traits amd64 6.4.3-2build2 [4087 kB] 80s Get:106 http://ftpmaster.internal/ubuntu questing/main amd64 python3-psutil amd64 5.9.8-2build3 [196 kB] 80s Get:107 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-nipype all 1.9.2-2 [1963 kB] 80s Get:108 http://ftpmaster.internal/ubuntu questing/main amd64 python3-pytz all 2025.1-3 [162 kB] 80s Get:109 http://ftpmaster.internal/ubuntu questing/main amd64 python3-tz all 2025.1-3 [1866 B] 80s Get:110 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-pandas-lib amd64 2.2.3+dfsg-8build1 [5332 kB] 80s Get:111 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-pandas all 2.2.3+dfsg-8build1 [3112 kB] 81s Get:112 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-pluggy all 1.5.0-1 [21.0 kB] 81s Get:113 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-pydot all 2.0.0-3 [24.9 kB] 81s Get:114 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-pytest all 8.3.5-1 [252 kB] 81s Get:115 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-pytest-xdist all 3.6.1-1 [33.8 kB] 81s Get:116 http://ftpmaster.internal/ubuntu questing/universe amd64 python3-roman-numerals all 3.1.0-1ubuntu1 [8432 B] 81s Get:117 http://ftpmaster.internal/ubuntu questing/main amd64 python3-snowballstemmer all 2.2.0-4build1 [59.8 kB] 81s Get:118 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 sphinx-common all 8.2.3-1 [656 kB] 81s Get:119 http://ftpmaster.internal/ubuntu questing/main amd64 python3-alabaster all 0.7.16-0.1 [18.5 kB] 81s Get:120 http://ftpmaster.internal/ubuntu questing-proposed/main amd64 python3-sphinx all 8.2.3-1 [482 kB] 81s Get:121 http://ftpmaster.internal/ubuntu questing/universe amd64 quilt all 0.68-1 [439 kB] 81s Fetched 87.6 MB in 5s (18.6 MB/s) 81s Selecting previously unselected package python3-numpy-dev:amd64. 81s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80527 files and directories currently installed.) 81s Preparing to unpack .../000-python3-numpy-dev_1%3a2.2.4+ds-1_amd64.deb ... 81s Unpacking python3-numpy-dev:amd64 (1:2.2.4+ds-1) ... 81s Selecting previously unselected package libblas3:amd64. 81s Preparing to unpack .../001-libblas3_3.12.1-2_amd64.deb ... 81s Unpacking libblas3:amd64 (3.12.1-2) ... 81s Selecting previously unselected package libgfortran5:amd64. 81s Preparing to unpack .../002-libgfortran5_15-20250404-0ubuntu1_amd64.deb ... 81s Unpacking libgfortran5:amd64 (15-20250404-0ubuntu1) ... 81s Selecting previously unselected package liblapack3:amd64. 81s Preparing to unpack .../003-liblapack3_3.12.1-2_amd64.deb ... 81s Unpacking liblapack3:amd64 (3.12.1-2) ... 81s Selecting previously unselected package python3-numpy. 81s Preparing to unpack .../004-python3-numpy_1%3a2.2.4+ds-1_amd64.deb ... 81s Unpacking python3-numpy (1:2.2.4+ds-1) ... 82s Selecting previously unselected package diffstat. 82s Preparing to unpack .../005-diffstat_1.67-1_amd64.deb ... 82s Unpacking diffstat (1.67-1) ... 82s Selecting previously unselected package sgml-base. 82s Preparing to unpack .../006-sgml-base_1.31+nmu1_all.deb ... 82s Unpacking sgml-base (1.31+nmu1) ... 82s Selecting previously unselected package xml-core. 82s Preparing to unpack .../007-xml-core_0.19_all.deb ... 82s Unpacking xml-core (0.19) ... 82s Selecting previously unselected package docutils-common. 82s Preparing to unpack .../008-docutils-common_0.21.2+dfsg-2_all.deb ... 82s Unpacking docutils-common (0.21.2+dfsg-2) ... 82s Selecting previously unselected package fonts-dejavu-mono. 82s Preparing to unpack .../009-fonts-dejavu-mono_2.37-8_all.deb ... 82s Unpacking fonts-dejavu-mono (2.37-8) ... 82s Selecting previously unselected package fonts-dejavu-core. 82s Preparing to unpack .../010-fonts-dejavu-core_2.37-8_all.deb ... 82s Unpacking fonts-dejavu-core (2.37-8) ... 82s Selecting previously unselected package fontconfig-config. 82s Preparing to unpack .../011-fontconfig-config_2.15.0-2.2ubuntu1_amd64.deb ... 82s Unpacking fontconfig-config (2.15.0-2.2ubuntu1) ... 82s Selecting previously unselected package libfontconfig1:amd64. 82s Preparing to unpack .../012-libfontconfig1_2.15.0-2.2ubuntu1_amd64.deb ... 82s Unpacking libfontconfig1:amd64 (2.15.0-2.2ubuntu1) ... 82s Selecting previously unselected package fontconfig. 82s Preparing to unpack .../013-fontconfig_2.15.0-2.2ubuntu1_amd64.deb ... 82s Unpacking fontconfig (2.15.0-2.2ubuntu1) ... 82s Selecting previously unselected package libgomp1:amd64. 82s Preparing to unpack .../014-libgomp1_15-20250404-0ubuntu1_amd64.deb ... 82s Unpacking libgomp1:amd64 (15-20250404-0ubuntu1) ... 82s Selecting previously unselected package gettext. 82s Preparing to unpack .../015-gettext_0.23.1-2_amd64.deb ... 82s Unpacking gettext (0.23.1-2) ... 82s Selecting previously unselected package libann0. 82s Preparing to unpack .../016-libann0_1.1.2+doc-9build1_amd64.deb ... 82s Unpacking libann0 (1.1.2+doc-9build1) ... 82s Selecting previously unselected package libcdt5:amd64. 82s Preparing to unpack .../017-libcdt5_2.42.4-3_amd64.deb ... 82s Unpacking libcdt5:amd64 (2.42.4-3) ... 82s Selecting previously unselected package libcgraph6:amd64. 82s Preparing to unpack .../018-libcgraph6_2.42.4-3_amd64.deb ... 82s Unpacking libcgraph6:amd64 (2.42.4-3) ... 82s Selecting previously unselected package libsharpyuv0:amd64. 82s Preparing to unpack .../019-libsharpyuv0_1.5.0-0.1_amd64.deb ... 82s Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ... 82s Selecting previously unselected package libaom3:amd64. 82s Preparing to unpack .../020-libaom3_3.12.1-1_amd64.deb ... 82s Unpacking libaom3:amd64 (3.12.1-1) ... 83s Selecting previously unselected package libheif-plugin-aomdec:amd64. 83s Preparing to unpack .../021-libheif-plugin-aomdec_1.19.8-1_amd64.deb ... 83s Unpacking libheif-plugin-aomdec:amd64 (1.19.8-1) ... 83s Selecting previously unselected package libde265-0:amd64. 83s Preparing to unpack .../022-libde265-0_1.0.15-1build5_amd64.deb ... 83s Unpacking libde265-0:amd64 (1.0.15-1build5) ... 83s Selecting previously unselected package libheif-plugin-libde265:amd64. 83s Preparing to unpack .../023-libheif-plugin-libde265_1.19.8-1_amd64.deb ... 83s Unpacking libheif-plugin-libde265:amd64 (1.19.8-1) ... 83s Selecting previously unselected package libheif1:amd64. 83s Preparing to unpack .../024-libheif1_1.19.8-1_amd64.deb ... 83s Unpacking libheif1:amd64 (1.19.8-1) ... 83s Selecting previously unselected package libimagequant0:amd64. 83s Preparing to unpack .../025-libimagequant0_2.18.0-1build1_amd64.deb ... 83s Unpacking libimagequant0:amd64 (2.18.0-1build1) ... 83s Selecting previously unselected package libjpeg-turbo8:amd64. 83s Preparing to unpack .../026-libjpeg-turbo8_2.1.5-3ubuntu2_amd64.deb ... 83s Unpacking libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 83s Selecting previously unselected package libjpeg8:amd64. 83s Preparing to unpack .../027-libjpeg8_8c-2ubuntu11_amd64.deb ... 83s Unpacking libjpeg8:amd64 (8c-2ubuntu11) ... 83s Selecting previously unselected package libdeflate0:amd64. 83s Preparing to unpack .../028-libdeflate0_1.23-2_amd64.deb ... 83s Unpacking libdeflate0:amd64 (1.23-2) ... 83s Selecting previously unselected package libjbig0:amd64. 83s Preparing to unpack .../029-libjbig0_2.1-6.1ubuntu2_amd64.deb ... 83s Unpacking libjbig0:amd64 (2.1-6.1ubuntu2) ... 83s Selecting previously unselected package liblerc4:amd64. 83s Preparing to unpack .../030-liblerc4_4.0.0+ds-5ubuntu1_amd64.deb ... 83s Unpacking liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 83s Selecting previously unselected package libwebp7:amd64. 83s Preparing to unpack .../031-libwebp7_1.5.0-0.1_amd64.deb ... 83s Unpacking libwebp7:amd64 (1.5.0-0.1) ... 83s Selecting previously unselected package libtiff6:amd64. 83s Preparing to unpack .../032-libtiff6_4.7.0-3ubuntu1_amd64.deb ... 83s Unpacking libtiff6:amd64 (4.7.0-3ubuntu1) ... 83s Selecting previously unselected package libxpm4:amd64. 83s Preparing to unpack .../033-libxpm4_1%3a3.5.17-1build2_amd64.deb ... 83s Unpacking libxpm4:amd64 (1:3.5.17-1build2) ... 83s Selecting previously unselected package libgd3:amd64. 83s Preparing to unpack .../034-libgd3_2.3.3-13ubuntu1_amd64.deb ... 83s Unpacking libgd3:amd64 (2.3.3-13ubuntu1) ... 83s Selecting previously unselected package libgts-0.7-5t64:amd64. 83s Preparing to unpack .../035-libgts-0.7-5t64_0.7.6+darcs121130-5.2build1_amd64.deb ... 83s Unpacking libgts-0.7-5t64:amd64 (0.7.6+darcs121130-5.2build1) ... 83s Selecting previously unselected package libpixman-1-0:amd64. 83s Preparing to unpack .../036-libpixman-1-0_0.44.0-3_amd64.deb ... 83s Unpacking libpixman-1-0:amd64 (0.44.0-3) ... 83s Selecting previously unselected package libxcb-render0:amd64. 83s Preparing to unpack .../037-libxcb-render0_1.17.0-2_amd64.deb ... 83s Unpacking libxcb-render0:amd64 (1.17.0-2) ... 83s Selecting previously unselected package libxcb-shm0:amd64. 83s Preparing to unpack .../038-libxcb-shm0_1.17.0-2_amd64.deb ... 83s Unpacking libxcb-shm0:amd64 (1.17.0-2) ... 83s Selecting previously unselected package libxrender1:amd64. 83s Preparing to unpack .../039-libxrender1_1%3a0.9.12-1_amd64.deb ... 83s Unpacking libxrender1:amd64 (1:0.9.12-1) ... 83s Selecting previously unselected package libcairo2:amd64. 83s Preparing to unpack .../040-libcairo2_1.18.4-1_amd64.deb ... 83s Unpacking libcairo2:amd64 (1.18.4-1) ... 83s Selecting previously unselected package libltdl7:amd64. 83s Preparing to unpack .../041-libltdl7_2.5.4-4_amd64.deb ... 83s Unpacking libltdl7:amd64 (2.5.4-4) ... 83s Selecting previously unselected package libgraphite2-3:amd64. 83s Preparing to unpack .../042-libgraphite2-3_1.3.14-2ubuntu1_amd64.deb ... 83s Unpacking libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 83s Selecting previously unselected package libharfbuzz0b:amd64. 83s Preparing to unpack .../043-libharfbuzz0b_10.2.0-1_amd64.deb ... 83s Unpacking libharfbuzz0b:amd64 (10.2.0-1) ... 83s Selecting previously unselected package libthai-data. 83s Preparing to unpack .../044-libthai-data_0.1.29-2build1_all.deb ... 83s Unpacking libthai-data (0.1.29-2build1) ... 83s Selecting previously unselected package libdatrie1:amd64. 83s Preparing to unpack .../045-libdatrie1_0.2.13-3build1_amd64.deb ... 83s Unpacking libdatrie1:amd64 (0.2.13-3build1) ... 83s Selecting previously unselected package libthai0:amd64. 83s Preparing to unpack .../046-libthai0_0.1.29-2build1_amd64.deb ... 83s Unpacking libthai0:amd64 (0.1.29-2build1) ... 83s Selecting previously unselected package libpango-1.0-0:amd64. 83s Preparing to unpack .../047-libpango-1.0-0_1.56.3-1_amd64.deb ... 83s Unpacking libpango-1.0-0:amd64 (1.56.3-1) ... 83s Selecting previously unselected package libpangoft2-1.0-0:amd64. 83s Preparing to unpack .../048-libpangoft2-1.0-0_1.56.3-1_amd64.deb ... 83s Unpacking libpangoft2-1.0-0:amd64 (1.56.3-1) ... 83s Selecting previously unselected package libpangocairo-1.0-0:amd64. 83s Preparing to unpack .../049-libpangocairo-1.0-0_1.56.3-1_amd64.deb ... 83s Unpacking libpangocairo-1.0-0:amd64 (1.56.3-1) ... 83s Selecting previously unselected package libpathplan4:amd64. 83s Preparing to unpack .../050-libpathplan4_2.42.4-3_amd64.deb ... 83s Unpacking libpathplan4:amd64 (2.42.4-3) ... 83s Selecting previously unselected package libgvc6. 83s Preparing to unpack .../051-libgvc6_2.42.4-3_amd64.deb ... 83s Unpacking libgvc6 (2.42.4-3) ... 83s Selecting previously unselected package libgvpr2:amd64. 83s Preparing to unpack .../052-libgvpr2_2.42.4-3_amd64.deb ... 83s Unpacking libgvpr2:amd64 (2.42.4-3) ... 83s Selecting previously unselected package liblab-gamut1:amd64. 83s Preparing to unpack .../053-liblab-gamut1_2.42.4-3_amd64.deb ... 83s Unpacking liblab-gamut1:amd64 (2.42.4-3) ... 83s Selecting previously unselected package x11-common. 83s Preparing to unpack .../054-x11-common_1%3a7.7+23ubuntu4_all.deb ... 83s Unpacking x11-common (1:7.7+23ubuntu4) ... 83s Selecting previously unselected package libice6:amd64. 83s Preparing to unpack .../055-libice6_2%3a1.1.1-1_amd64.deb ... 83s Unpacking libice6:amd64 (2:1.1.1-1) ... 83s Selecting previously unselected package libsm6:amd64. 83s Preparing to unpack .../056-libsm6_2%3a1.2.6-1_amd64.deb ... 83s Unpacking libsm6:amd64 (2:1.2.6-1) ... 83s Selecting previously unselected package libxt6t64:amd64. 83s Preparing to unpack .../057-libxt6t64_1%3a1.2.1-1.2build1_amd64.deb ... 83s Unpacking libxt6t64:amd64 (1:1.2.1-1.2build1) ... 84s Selecting previously unselected package libxmu6:amd64. 84s Preparing to unpack .../058-libxmu6_2%3a1.1.3-3build2_amd64.deb ... 84s Unpacking libxmu6:amd64 (2:1.1.3-3build2) ... 84s Selecting previously unselected package libxaw7:amd64. 84s Preparing to unpack .../059-libxaw7_2%3a1.0.16-1_amd64.deb ... 84s Unpacking libxaw7:amd64 (2:1.0.16-1) ... 84s Selecting previously unselected package graphviz. 84s Preparing to unpack .../060-graphviz_2.42.4-3_amd64.deb ... 84s Unpacking graphviz (2.42.4-3) ... 84s Selecting previously unselected package libaec0:amd64. 84s Preparing to unpack .../061-libaec0_1.1.3-1_amd64.deb ... 84s Unpacking libaec0:amd64 (1.1.3-1) ... 84s Selecting previously unselected package libsz2:amd64. 84s Preparing to unpack .../062-libsz2_1.1.3-1_amd64.deb ... 84s Unpacking libsz2:amd64 (1.1.3-1) ... 84s Selecting previously unselected package libhdf5-310:amd64. 84s Preparing to unpack .../063-libhdf5-310_1.14.5+repack-3_amd64.deb ... 84s Unpacking libhdf5-310:amd64 (1.14.5+repack-3) ... 84s Selecting previously unselected package libhdf5-hl-310:amd64. 84s Preparing to unpack .../064-libhdf5-hl-310_1.14.5+repack-3_amd64.deb ... 84s Unpacking libhdf5-hl-310:amd64 (1.14.5+repack-3) ... 84s Selecting previously unselected package libjs-jquery. 84s Preparing to unpack .../065-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 84s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 84s Selecting previously unselected package libjs-underscore. 84s Preparing to unpack .../066-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ... 84s Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 84s Selecting previously unselected package libjs-sphinxdoc. 84s Preparing to unpack .../067-libjs-sphinxdoc_8.2.3-1_all.deb ... 84s Unpacking libjs-sphinxdoc (8.2.3-1) ... 84s Selecting previously unselected package libjson-perl. 84s Preparing to unpack .../068-libjson-perl_4.10000-1_all.deb ... 84s Unpacking libjson-perl (4.10000-1) ... 84s Selecting previously unselected package liblbfgsb0:amd64. 84s Preparing to unpack .../069-liblbfgsb0_3.0+dfsg.4-1build1_amd64.deb ... 84s Unpacking liblbfgsb0:amd64 (3.0+dfsg.4-1build1) ... 84s Selecting previously unselected package liblzf1:amd64. 84s Preparing to unpack .../070-liblzf1_3.6-4_amd64.deb ... 84s Unpacking liblzf1:amd64 (3.6-4) ... 84s Selecting previously unselected package libxslt1.1:amd64. 84s Preparing to unpack .../071-libxslt1.1_1.1.39-0exp1ubuntu4_amd64.deb ... 84s Unpacking libxslt1.1:amd64 (1.1.39-0exp1ubuntu4) ... 84s Selecting previously unselected package python-nipype-doc. 84s Preparing to unpack .../072-python-nipype-doc_1.9.2-2_all.deb ... 84s Unpacking python-nipype-doc (1.9.2-2) ... 84s Selecting previously unselected package python3-all. 84s Preparing to unpack .../073-python3-all_3.13.3-1_amd64.deb ... 84s Unpacking python3-all (3.13.3-1) ... 84s Selecting previously unselected package python3-ci-info. 84s Preparing to unpack .../074-python3-ci-info_0.3.0-1_all.deb ... 84s Unpacking python3-ci-info (0.3.0-1) ... 84s Selecting previously unselected package python3-click. 84s Preparing to unpack .../075-python3-click_8.2.0+0.really.8.1.8-1_all.deb ... 84s Unpacking python3-click (8.2.0+0.really.8.1.8-1) ... 84s Selecting previously unselected package python3-decorator. 84s Preparing to unpack .../076-python3-decorator_5.2.1-2_all.deb ... 84s Unpacking python3-decorator (5.2.1-2) ... 84s Selecting previously unselected package python3-jsonpickle. 84s Preparing to unpack .../077-python3-jsonpickle_4.0.2+dfsg-2_all.deb ... 84s Unpacking python3-jsonpickle (4.0.2+dfsg-2) ... 84s Selecting previously unselected package python3-orderly-set. 84s Preparing to unpack .../078-python3-orderly-set_5.3.2-1_all.deb ... 84s Unpacking python3-orderly-set (5.3.2-1) ... 84s Selecting previously unselected package python3-deepdiff. 84s Preparing to unpack .../079-python3-deepdiff_8.1.1-3_all.deb ... 84s Unpacking python3-deepdiff (8.1.1-3) ... 84s Selecting previously unselected package python3-defusedxml. 84s Preparing to unpack .../080-python3-defusedxml_0.7.1-3_all.deb ... 84s Unpacking python3-defusedxml (0.7.1-3) ... 84s Selecting previously unselected package python3-h5py-serial. 84s Preparing to unpack .../081-python3-h5py-serial_3.13.0-1_amd64.deb ... 84s Unpacking python3-h5py-serial (3.13.0-1) ... 84s Selecting previously unselected package python3-h5py. 84s Preparing to unpack .../082-python3-h5py_3.13.0-1_all.deb ... 84s Unpacking python3-h5py (3.13.0-1) ... 84s Selecting previously unselected package python3-scipy. 84s Preparing to unpack .../083-python3-scipy_1.14.1-4ubuntu2_amd64.deb ... 84s Unpacking python3-scipy (1.14.1-4ubuntu2) ... 85s Selecting previously unselected package python3-nibabel. 85s Preparing to unpack .../084-python3-nibabel_5.3.2-2_all.deb ... 85s Unpacking python3-nibabel (5.3.2-2) ... 85s Selecting previously unselected package python3-tqdm. 85s Preparing to unpack .../085-python3-tqdm_4.67.1-3_all.deb ... 85s Unpacking python3-tqdm (4.67.1-3) ... 85s Selecting previously unselected package python3-setuptools-scm. 85s Preparing to unpack .../086-python3-setuptools-scm_8.2.1-1_all.deb ... 85s Unpacking python3-setuptools-scm (8.2.1-1) ... 85s Selecting previously unselected package python3-trx-python. 85s Preparing to unpack .../087-python3-trx-python_0.3-1_all.deb ... 85s Unpacking python3-trx-python (0.3-1) ... 85s Selecting previously unselected package python3-dipy-lib:amd64. 85s Preparing to unpack .../088-python3-dipy-lib_1.11.0-2_amd64.deb ... 85s Unpacking python3-dipy-lib:amd64 (1.11.0-2) ... 85s Selecting previously unselected package python3-dipy. 85s Preparing to unpack .../089-python3-dipy_1.11.0-2_all.deb ... 85s Unpacking python3-dipy (1.11.0-2) ... 85s Selecting previously unselected package python3-roman. 85s Preparing to unpack .../090-python3-roman_5.0-1_all.deb ... 85s Unpacking python3-roman (5.0-1) ... 85s Selecting previously unselected package python3-docutils. 85s Preparing to unpack .../091-python3-docutils_0.21.2+dfsg-2_all.deb ... 85s Unpacking python3-docutils (0.21.2+dfsg-2) ... 85s Selecting previously unselected package python3-etelemetry. 85s Preparing to unpack .../092-python3-etelemetry_0.3.1-1_all.deb ... 85s Unpacking python3-etelemetry (0.3.1-1) ... 85s Selecting previously unselected package python3-execnet. 85s Preparing to unpack .../093-python3-execnet_2.1.1-1_all.deb ... 85s Unpacking python3-execnet (2.1.1-1) ... 85s Selecting previously unselected package python3-filelock. 85s Preparing to unpack .../094-python3-filelock_3.18.0-1_all.deb ... 85s Unpacking python3-filelock (3.18.0-1) ... 85s Selecting previously unselected package python3-imagesize. 85s Preparing to unpack .../095-python3-imagesize_1.4.1-1_all.deb ... 85s Unpacking python3-imagesize (1.4.1-1) ... 85s Selecting previously unselected package python3-iniconfig. 85s Preparing to unpack .../096-python3-iniconfig_1.1.1-2_all.deb ... 85s Unpacking python3-iniconfig (1.1.1-2) ... 85s Selecting previously unselected package python3-looseversion. 85s Preparing to unpack .../097-python3-looseversion_1.3.0-3_all.deb ... 85s Unpacking python3-looseversion (1.3.0-3) ... 85s Selecting previously unselected package python3-lxml:amd64. 85s Preparing to unpack .../098-python3-lxml_5.4.0-1_amd64.deb ... 85s Unpacking python3-lxml:amd64 (5.4.0-1) ... 85s Selecting previously unselected package python3-networkx. 86s Preparing to unpack .../099-python3-networkx_3.2.1-4ubuntu1_all.deb ... 86s Unpacking python3-networkx (3.2.1-4ubuntu1) ... 86s Selecting previously unselected package python3-rdflib. 86s Preparing to unpack .../100-python3-rdflib_7.1.1-2_all.deb ... 86s Unpacking python3-rdflib (7.1.1-2) ... 86s Selecting previously unselected package python3-prov. 86s Preparing to unpack .../101-python3-prov_2.0.1-1_all.deb ... 86s Unpacking python3-prov (2.0.1-1) ... 86s Selecting previously unselected package python3-puremagic. 86s Preparing to unpack .../102-python3-puremagic_1.28-1_all.deb ... 86s Unpacking python3-puremagic (1.28-1) ... 86s Selecting previously unselected package python3-simplejson. 86s Preparing to unpack .../103-python3-simplejson_3.20.1-1_amd64.deb ... 86s Unpacking python3-simplejson (3.20.1-1) ... 86s Selecting previously unselected package python3-traits. 86s Preparing to unpack .../104-python3-traits_6.4.3-2build2_amd64.deb ... 86s Unpacking python3-traits (6.4.3-2build2) ... 86s Selecting previously unselected package python3-psutil. 86s Preparing to unpack .../105-python3-psutil_5.9.8-2build3_amd64.deb ... 86s Unpacking python3-psutil (5.9.8-2build3) ... 86s Selecting previously unselected package python3-nipype. 86s Preparing to unpack .../106-python3-nipype_1.9.2-2_all.deb ... 86s Unpacking python3-nipype (1.9.2-2) ... 87s Selecting previously unselected package python3-pytz. 87s Preparing to unpack .../107-python3-pytz_2025.1-3_all.deb ... 87s Unpacking python3-pytz (2025.1-3) ... 87s Selecting previously unselected package python3-tz. 87s Preparing to unpack .../108-python3-tz_2025.1-3_all.deb ... 87s Unpacking python3-tz (2025.1-3) ... 87s Selecting previously unselected package python3-pandas-lib:amd64. 87s Preparing to unpack .../109-python3-pandas-lib_2.2.3+dfsg-8build1_amd64.deb ... 87s Unpacking python3-pandas-lib:amd64 (2.2.3+dfsg-8build1) ... 87s Selecting previously unselected package python3-pandas. 87s Preparing to unpack .../110-python3-pandas_2.2.3+dfsg-8build1_all.deb ... 87s Unpacking python3-pandas (2.2.3+dfsg-8build1) ... 87s Selecting previously unselected package python3-pluggy. 87s Preparing to unpack .../111-python3-pluggy_1.5.0-1_all.deb ... 87s Unpacking python3-pluggy (1.5.0-1) ... 87s Selecting previously unselected package python3-pydot. 87s Preparing to unpack .../112-python3-pydot_2.0.0-3_all.deb ... 87s Unpacking python3-pydot (2.0.0-3) ... 87s Selecting previously unselected package python3-pytest. 87s Preparing to unpack .../113-python3-pytest_8.3.5-1_all.deb ... 87s Unpacking python3-pytest (8.3.5-1) ... 87s Selecting previously unselected package python3-pytest-xdist. 87s Preparing to unpack .../114-python3-pytest-xdist_3.6.1-1_all.deb ... 87s Unpacking python3-pytest-xdist (3.6.1-1) ... 87s Selecting previously unselected package python3-roman-numerals. 87s Preparing to unpack .../115-python3-roman-numerals_3.1.0-1ubuntu1_all.deb ... 87s Unpacking python3-roman-numerals (3.1.0-1ubuntu1) ... 87s Selecting previously unselected package python3-snowballstemmer. 87s Preparing to unpack .../116-python3-snowballstemmer_2.2.0-4build1_all.deb ... 87s Unpacking python3-snowballstemmer (2.2.0-4build1) ... 87s Selecting previously unselected package sphinx-common. 87s Preparing to unpack .../117-sphinx-common_8.2.3-1_all.deb ... 87s Unpacking sphinx-common (8.2.3-1) ... 88s Selecting previously unselected package python3-alabaster. 88s Preparing to unpack .../118-python3-alabaster_0.7.16-0.1_all.deb ... 88s Unpacking python3-alabaster (0.7.16-0.1) ... 88s Selecting previously unselected package python3-sphinx. 88s Preparing to unpack .../119-python3-sphinx_8.2.3-1_all.deb ... 88s Unpacking python3-sphinx (8.2.3-1) ... 88s Selecting previously unselected package quilt. 88s Preparing to unpack .../120-quilt_0.68-1_all.deb ... 88s Unpacking quilt (0.68-1) ... 88s Setting up libgraphite2-3:amd64 (1.3.14-2ubuntu1) ... 88s Setting up python3-iniconfig (1.1.1-2) ... 88s Setting up libpixman-1-0:amd64 (0.44.0-3) ... 88s Setting up libsharpyuv0:amd64 (1.5.0-0.1) ... 88s Setting up libaom3:amd64 (3.12.1-1) ... 88s Setting up python3-filelock (3.18.0-1) ... 88s Setting up python3-jsonpickle (4.0.2+dfsg-2) ... 88s Setting up liblerc4:amd64 (4.0.0+ds-5ubuntu1) ... 88s Setting up libxpm4:amd64 (1:3.5.17-1build2) ... 88s Setting up python3-traits (6.4.3-2build2) ... 89s Setting up libxrender1:amd64 (1:0.9.12-1) ... 89s Setting up libdatrie1:amd64 (0.2.13-3build1) ... 89s Setting up libxcb-render0:amd64 (1.17.0-2) ... 89s Setting up python3-defusedxml (0.7.1-3) ... 89s Setting up python3-alabaster (0.7.16-0.1) ... 89s Setting up python3-tqdm (4.67.1-3) ... 89s Setting up liblab-gamut1:amd64 (2.42.4-3) ... 89s Setting up x11-common (1:7.7+23ubuntu4) ... 89s Setting up libdeflate0:amd64 (1.23-2) ... 89s Setting up python3-all (3.13.3-1) ... 89s Setting up python3-pytz (2025.1-3) ... 89s Setting up libxcb-shm0:amd64 (1.17.0-2) ... 89s Setting up libgomp1:amd64 (15-20250404-0ubuntu1) ... 89s Setting up python3-click (8.2.0+0.really.8.1.8-1) ... 90s Setting up python3-networkx (3.2.1-4ubuntu1) ... 90s Setting up libjbig0:amd64 (2.1-6.1ubuntu2) ... 90s Setting up python3-setuptools-scm (8.2.1-1) ... 91s Setting up libaec0:amd64 (1.1.3-1) ... 91s Setting up python3-psutil (5.9.8-2build3) ... 91s Setting up python3-tz (2025.1-3) ... 91s Setting up python3-simplejson (3.20.1-1) ... 91s Setting up python3-puremagic (1.28-1) ... 91s Setting up python3-roman (5.0-1) ... 91s Setting up python3-decorator (5.2.1-2) ... 91s Setting up libblas3:amd64 (3.12.1-2) ... 91s update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode 91s Setting up python3-orderly-set (5.3.2-1) ... 91s Setting up python3-snowballstemmer (2.2.0-4build1) ... 92s Setting up libpathplan4:amd64 (2.42.4-3) ... 92s Setting up libann0 (1.1.2+doc-9build1) ... 92s Setting up liblzf1:amd64 (3.6-4) ... 92s Setting up diffstat (1.67-1) ... 92s Setting up libimagequant0:amd64 (2.18.0-1build1) ... 92s Setting up fonts-dejavu-mono (2.37-8) ... 92s Setting up python3-numpy-dev:amd64 (1:2.2.4+ds-1) ... 92s Setting up fonts-dejavu-core (2.37-8) ... 92s Setting up libjpeg-turbo8:amd64 (2.1.5-3ubuntu2) ... 92s Setting up libltdl7:amd64 (2.5.4-4) ... 92s Setting up libgfortran5:amd64 (15-20250404-0ubuntu1) ... 92s Setting up python3-ci-info (0.3.0-1) ... 92s Setting up python3-pluggy (1.5.0-1) ... 92s Setting up libwebp7:amd64 (1.5.0-0.1) ... 92s Setting up python3-looseversion (1.3.0-3) ... 92s Setting up python3-rdflib (7.1.1-2) ... 92s Setting up libjson-perl (4.10000-1) ... 92s Setting up libxslt1.1:amd64 (1.1.39-0exp1ubuntu4) ... 92s Setting up python3-roman-numerals (3.1.0-1ubuntu1) ... 93s Setting up libharfbuzz0b:amd64 (10.2.0-1) ... 93s Setting up libthai-data (0.1.29-2build1) ... 93s Setting up libgts-0.7-5t64:amd64 (0.7.6+darcs121130-5.2build1) ... 93s Setting up sgml-base (1.31+nmu1) ... 93s Setting up libcdt5:amd64 (2.42.4-3) ... 93s Setting up libcgraph6:amd64 (2.42.4-3) ... 93s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 93s Setting up libde265-0:amd64 (1.0.15-1build5) ... 93s Setting up python3-execnet (2.1.1-1) ... 93s Setting up libsz2:amd64 (1.1.3-1) ... 93s Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... 93s Setting up python3-imagesize (1.4.1-1) ... 93s Setting up libjpeg8:amd64 (8c-2ubuntu11) ... 93s Setting up libice6:amd64 (2:1.1.1-1) ... 93s Setting up liblapack3:amd64 (3.12.1-2) ... 93s update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode 93s Setting up gettext (0.23.1-2) ... 93s Setting up fontconfig-config (2.15.0-2.2ubuntu1) ... 93s Setting up python3-pytest (8.3.5-1) ... 93s Setting up quilt (0.68-1) ... 93s Setting up python3-etelemetry (0.3.1-1) ... 93s Setting up libthai0:amd64 (0.1.29-2build1) ... 93s Setting up python-nipype-doc (1.9.2-2) ... 93s Setting up python3-numpy (1:2.2.4+ds-1) ... 95s Setting up libjs-sphinxdoc (8.2.3-1) ... 95s Setting up libgvpr2:amd64 (2.42.4-3) ... 95s Setting up libhdf5-310:amd64 (1.14.5+repack-3) ... 95s Setting up python3-lxml:amd64 (5.4.0-1) ... 95s Setting up libtiff6:amd64 (4.7.0-3ubuntu1) ... 95s Setting up xml-core (0.19) ... 95s Setting up libfontconfig1:amd64 (2.15.0-2.2ubuntu1) ... 95s Setting up libsm6:amd64 (2:1.2.6-1) ... 95s Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1build1) ... 95s Setting up libhdf5-hl-310:amd64 (1.14.5+repack-3) ... 95s Setting up fontconfig (2.15.0-2.2ubuntu1) ... 97s Regenerating fonts cache... done. 97s Setting up python3-deepdiff (8.1.1-3) ... 97s Setting up python3-scipy (1.14.1-4ubuntu2) ... 100s Setting up python3-pytest-xdist (3.6.1-1) ... 100s Setting up python3-pandas-lib:amd64 (2.2.3+dfsg-8build1) ... 100s Setting up libpango-1.0-0:amd64 (1.56.3-1) ... 100s Setting up python3-h5py-serial (3.13.0-1) ... 100s Setting up libcairo2:amd64 (1.18.4-1) ... 100s Setting up python3-prov (2.0.1-1) ... 100s Setting up python3-dipy-lib:amd64 (1.11.0-2) ... 100s Setting up python3-pandas (2.2.3+dfsg-8build1) ... 104s Setting up python3-nibabel (5.3.2-2) ... 105s Setting up sphinx-common (8.2.3-1) ... 105s Setting up libxt6t64:amd64 (1:1.2.1-1.2build1) ... 105s Setting up python3-h5py (3.13.0-1) ... 105s Setting up libpangoft2-1.0-0:amd64 (1.56.3-1) ... 105s Setting up libpangocairo-1.0-0:amd64 (1.56.3-1) ... 105s Setting up libxmu6:amd64 (2:1.1.3-3build2) ... 105s Setting up python3-trx-python (0.3-1) ... 105s Setting up python3-dipy (1.11.0-2) ... 105s Setting up libxaw7:amd64 (2:1.0.16-1) ... 105s Setting up python3-nipype (1.9.2-2) ... 107s Setting up libheif-plugin-aomdec:amd64 (1.19.8-1) ... 107s Setting up libheif-plugin-libde265:amd64 (1.19.8-1) ... 107s Setting up libheif1:amd64 (1.19.8-1) ... 107s Setting up libgd3:amd64 (2.3.3-13ubuntu1) ... 107s Setting up libgvc6 (2.42.4-3) ... 107s Setting up graphviz (2.42.4-3) ... 107s Setting up python3-pydot (2.0.0-3) ... 107s Processing triggers for libc-bin (2.41-6ubuntu1) ... 107s Processing triggers for man-db (2.13.1-1) ... 108s Processing triggers for install-info (7.1.1-1) ... 108s Processing triggers for sgml-base (1.31+nmu1) ... 108s Setting up docutils-common (0.21.2+dfsg-2) ... 108s Processing triggers for sgml-base (1.31+nmu1) ... 108s Setting up python3-docutils (0.21.2+dfsg-2) ... 109s Setting up python3-sphinx (8.2.3-1) ... 110s autopkgtest [11:46:56]: test run-unit-test: [----------------------- 111s File series fully applied, ends at patch debian/patches/acres.patch 111s dpkg-architecture: warning: cannot determine CC system type, falling back to default (native compilation) 111s Skip following Tests: not nipype.interfaces.io.BIDSDataGrabber 111s Testing with python3.13 in /tmp/autopkgtest.AZdejM/autopkgtest_tmp: 112s ============================= test session starts ============================== 112s platform linux -- Python 3.13.3, pytest-8.3.5, pluggy-1.5.0 -- /usr/bin/python3.13 112s cachedir: .pytest_cache 112s rootdir: /tmp/autopkgtest.AZdejM/autopkgtest_tmp/nipype 112s configfile: pytest.ini 112s plugins: typeguard-4.4.2, xdist-3.6.1 120s collecting ... collected 3013 items / 1 error / 1 deselected / 3012 selected 120s 120s ==================================== ERRORS ==================================== 120s ________________ ERROR collecting sphinxext/apidoc/__init__.py _________________ 120s nipype/sphinxext/apidoc/__init__.py:16: in 120s class Config(NapoleonConfig): 120s nipype/sphinxext/apidoc/__init__.py:42: in Config 120s _config_values = { 120s E TypeError: 'tuple' object is not a mapping 120s =============================== warnings summary =============================== 120s ../../../usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:258 120s /usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:258: DeprecationWarning: module 'sre_parse' is deprecated 120s import sre_parse 120s 120s ../../../usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:259 120s /usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:259: DeprecationWarning: module 'sre_constants' is deprecated 120s import sre_constants 120s 120s ../../../usr/lib/python3/dist-packages/_pytest/config/__init__.py:1441 120s /usr/lib/python3/dist-packages/_pytest/config/__init__.py:1441: PytestConfigWarning: Unknown config option: env 120s 120s self._warn_or_fail_if_strict(f"Unknown config option: {key}\n") 120s 120s ../../../usr/lib/python3/dist-packages/dipy/align/streamwarp.py:15 120s /usr/lib/python3/dist-packages/dipy/align/streamwarp.py:15: UserWarning: You do not have FURY installed. Some visualization functions might not work for you. Please install or upgrade FURY using pip install -U fury. For detailed installation instructions visit: https://fury.gl/ 120s from dipy.viz.plotting import bundle_shape_profile 120s 120s nipype/pipeline/engine/tests/test_nodes.py:319 120s /tmp/autopkgtest.AZdejM/autopkgtest_tmp/nipype/pipeline/engine/tests/test_nodes.py:319: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html 120s @pytest.mark.timeout(30) 120s 120s nipype/pipeline/plugins/tests/test_oar.py:33 120s /tmp/autopkgtest.AZdejM/autopkgtest_tmp/nipype/pipeline/plugins/tests/test_oar.py:33: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html 120s @pytest.mark.timeout(60) 120s 120s nipype/pipeline/plugins/tests/test_pbs.py:32 120s /tmp/autopkgtest.AZdejM/autopkgtest_tmp/nipype/pipeline/plugins/tests/test_pbs.py:32: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html 120s @pytest.mark.timeout(60) 120s 120s nipype/utils/tests/test_provenance.py:16 120s /tmp/autopkgtest.AZdejM/autopkgtest_tmp/nipype/utils/tests/test_provenance.py:16: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html 120s @pytest.mark.timeout(60) 120s 120s nipype/utils/tests/test_provenance.py:29 120s /tmp/autopkgtest.AZdejM/autopkgtest_tmp/nipype/utils/tests/test_provenance.py:29: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html 120s @pytest.mark.timeout(60) 120s 120s nipype/workflows/__init__.py:27 120s /tmp/autopkgtest.AZdejM/autopkgtest_tmp/nipype/workflows/__init__.py:27: UserWarning: Nipype 1 workflows have been moved to the niflow-nipype1-workflows package. pip install niflow-nipype1-workflows to continue using them. 120s warnings.warn(" ".join(_msg)) 120s 120s -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html 120s =========================== short test summary info ============================ 120s ERROR nipype/sphinxext/apidoc/__init__.py - TypeError: 'tuple' object is not ... 120s !!!!!!!!!!!!!!!!!!!! Interrupted: 1 error during collection !!!!!!!!!!!!!!!!!!!! 120s ================= 1 deselected, 10 warnings, 1 error in 8.35s ================== 121s autopkgtest [11:47:07]: test run-unit-test: -----------------------] 121s run-unit-test FAIL non-zero exit status 2 121s autopkgtest [11:47:07]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 122s autopkgtest [11:47:08]: @@@@@@@@@@@@@@@@@@@@ summary 122s run-unit-test FAIL non-zero exit status 2 127s nova [W] Skipping flock for amd64 127s Creating nova instance adt-questing-amd64-nipype-20250506-114506-juju-7f2275-prod-proposed-migration-environment-23-7b699953-e450-4469-ae2e-a517a4599201 from image adt/ubuntu-questing-amd64-server-20250506.img (UUID f1864fa2-149c-4e5d-800d-c5107d8a2f35)... 127s nova [W] Timed out waiting for 3898a618-9ca5-467a-b644-781c581a801e to get deleted.