0s autopkgtest [13:58:26]: starting date and time: 2025-03-15 13:58:26+0000
  0s autopkgtest [13:58:26]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  0s autopkgtest [13:58:26]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.xogc8tax/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade twopaco --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-s390x-21.secgroup --name adt-plucky-s390x-twopaco-20250315-135826-juju-7f2275-prod-proposed-migration-environment-15-106041ed-5f02-43b4-9f07-29454a2de840 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
128s autopkgtest [14:00:34]: testbed dpkg architecture: s390x
128s autopkgtest [14:00:34]: testbed apt version: 2.9.33
128s autopkgtest [14:00:34]: @@@@@@@@@@@@@@@@@@@@ test bed setup
129s autopkgtest [14:00:35]: testbed release detected to be: None
130s autopkgtest [14:00:35]: updating testbed package index (apt update)
130s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB]
130s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
130s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
130s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
130s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [404 kB]
131s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [101 kB]
131s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB]
131s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [80.6 kB]
131s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1940 B]
131s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B]
131s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [342 kB]
131s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [14.4 kB]
131s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3776 B]
131s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [328 B]
131s Fetched 1090 kB in 2s (641 kB/s)
132s Reading package lists...
132s + lsb_release --codename --short
132s + RELEASE=plucky
132s + cat
132s + [ plucky != trusty ]
132s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade
132s Reading package lists...
133s Building dependency tree...
133s Reading state information...
133s Calculating upgrade...
133s Calculating upgrade...
133s The following packages were automatically installed and are no longer required:
133s   libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64
133s   linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic
133s   linux-modules-6.11.0-8-generic linux-tools-6.11.0-8
133s   linux-tools-6.11.0-8-generic
133s Use 'sudo apt autoremove' to remove them.
133s The following packages will be upgraded:
133s   python3-jinja2 strace
133s 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
133s Need to get 609 kB of archives.
133s After this operation, 27.6 kB of additional disk space will be used.
133s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB]
134s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB]
134s Fetched 609 kB in 1s (618 kB/s)
134s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81428 files and directories currently installed.)
134s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ...
134s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ...
134s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ...
134s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ...
134s Setting up python3-jinja2 (3.1.5-2ubuntu1) ...
134s Setting up strace (6.13+ds-1ubuntu1) ...
134s Processing triggers for man-db (2.13.0-1) ...
135s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref
135s + /usr/lib/apt/apt-helper analyze-pattern ?true
135s + uname -r
135s + sed s/\./\\./g
135s + running_kernel_pattern=^linux-.*6\.14\.0-10-generic.*
135s + apt list ?obsolete
135s + + tail -n+2
135s cut -d/ -f1
135s + grep -v ^linux-.*6\.14\.0-10-generic.*
135s + obsolete_pkgs=linux-headers-6.11.0-8-generic
135s linux-headers-6.11.0-8
135s linux-modules-6.11.0-8-generic
135s linux-tools-6.11.0-8-generic
135s linux-tools-6.11.0-8
135s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove linux-headers-6.11.0-8-generic linux-headers-6.11.0-8 linux-modules-6.11.0-8-generic linux-tools-6.11.0-8-generic linux-tools-6.11.0-8
135s Reading package lists...
135s Building dependency tree...
135s Reading state information...
135s Solving dependencies...
135s The following packages will be REMOVED:
135s   libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64*
135s   linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
135s   linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8*
135s   linux-tools-6.11.0-8-generic*
136s 0 upgraded, 0 newly installed, 9 to remove and 5 not upgraded.
136s After this operation, 167 MB disk space will be freed.
136s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81428 files and directories currently installed.)
136s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
136s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
136s Removing libpython3.12t64:s390x (3.12.9-1) ...
136s Removing libpython3.12-stdlib:s390x (3.12.9-1) ...
136s Removing libnsl2:s390x (1.3.0-3build3) ...
136s Removing libpython3.12-minimal:s390x (3.12.9-1) ...
136s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
136s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
136s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
137s Processing triggers for libc-bin (2.41-1ubuntu1) ...
137s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56328 files and directories currently installed.)
137s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ...
137s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
137s + grep -q trusty /etc/lsb-release
137s + [ ! -d /usr/share/doc/unattended-upgrades ]
137s + [ ! -d /usr/share/doc/lxd ]
137s + [ ! -d /usr/share/doc/lxd-client ]
137s + [ ! -d /usr/share/doc/snapd ]
137s + type iptables
137s + cat
137s + chmod 755 /etc/rc.local
137s + . /etc/rc.local
137s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu
137s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP
137s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP
137s + uname -m
137s + [ s390x = ppc64le ]
137s + [ -d /run/systemd/system ]
137s + systemd-detect-virt --quiet --vm
137s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/
137s + cat
137s + grep -q lz4 /etc/initramfs-tools/initramfs.conf
137s + echo COMPRESS=lz4
137s autopkgtest [14:00:43]: upgrading testbed (apt dist-upgrade and autopurge)
137s Reading package lists...
137s Building dependency tree...
137s Reading state information...
137s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
137s Starting 2 pkgProblemResolver with broken count: 0
137s Done
138s Entering ResolveByKeep
138s 
138s Calculating upgrade...
138s The following packages will be upgraded:
138s   libc-bin libc-dev-bin libc6 libc6-dev locales
138s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
138s Need to get 9512 kB of archives.
138s After this operation, 8192 B of additional disk space will be used.
138s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6-dev s390x 2.41-1ubuntu2 [1678 kB]
140s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-dev-bin s390x 2.41-1ubuntu2 [24.3 kB]
140s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6 s390x 2.41-1ubuntu2 [2892 kB]
143s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-bin s390x 2.41-1ubuntu2 [671 kB]
143s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x locales all 2.41-1ubuntu2 [4246 kB]
147s Preconfiguring packages ...
147s Fetched 9512 kB in 9s (1037 kB/s)
147s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
147s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_s390x.deb ...
147s Unpacking libc6-dev:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
147s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_s390x.deb ...
147s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
148s Preparing to unpack .../libc6_2.41-1ubuntu2_s390x.deb ...
148s Unpacking libc6:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
148s Setting up libc6:s390x (2.41-1ubuntu2) ...
148s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
148s Preparing to unpack .../libc-bin_2.41-1ubuntu2_s390x.deb ...
148s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
148s Setting up libc-bin (2.41-1ubuntu2) ...
148s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
148s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ...
148s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
148s Setting up locales (2.41-1ubuntu2) ...
148s Generating locales (this might take a while)...
149s   en_US.UTF-8... done
149s Generation complete.
149s Setting up libc-dev-bin (2.41-1ubuntu2) ...
149s Setting up libc6-dev:s390x (2.41-1ubuntu2) ...
149s Processing triggers for man-db (2.13.0-1) ...
150s Processing triggers for systemd (257.3-1ubuntu3) ...
151s Reading package lists...
151s Building dependency tree...
151s Reading state information...
151s Starting pkgProblemResolver with broken count: 0
151s Starting 2 pkgProblemResolver with broken count: 0
151s Done
151s Solving dependencies...
152s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
152s autopkgtest [14:00:58]: rebooting testbed after setup commands that affected boot
173s autopkgtest [14:01:19]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP Wed Mar 12 14:53:49 UTC 2025
175s autopkgtest [14:01:21]: @@@@@@@@@@@@@@@@@@@@ apt-source twopaco
177s Get:1 http://ftpmaster.internal/ubuntu plucky/universe twopaco 1.0.0+dfsg-1 (dsc) [2022 B]
177s Get:2 http://ftpmaster.internal/ubuntu plucky/universe twopaco 1.0.0+dfsg-1 (tar) [179 kB]
177s Get:3 http://ftpmaster.internal/ubuntu plucky/universe twopaco 1.0.0+dfsg-1 (diff) [5356 B]
177s gpgv: Signature made Thu Sep 29 05:53:28 2022 UTC
177s gpgv:                using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287
177s gpgv:                issuer "merkys@debian.org"
177s gpgv: Can't check signature: No public key
177s dpkg-source: warning: cannot verify inline signature for ./twopaco_1.0.0+dfsg-1.dsc: no acceptable signature found
177s autopkgtest [14:01:23]: testing package twopaco version 1.0.0+dfsg-1
177s autopkgtest [14:01:23]: build not needed
178s autopkgtest [14:01:24]: test run-unit-test: preparing testbed
178s Reading package lists...
178s Building dependency tree...
178s Reading state information...
178s Starting pkgProblemResolver with broken count: 0
178s Starting 2 pkgProblemResolver with broken count: 0
178s Done
179s The following NEW packages will be installed:
179s   libhwloc15 libtbb12 libtbbbind-2-5 libtbbmalloc2 twopaco
179s 0 upgraded, 5 newly installed, 0 to remove and 0 not upgraded.
179s Need to get 705 kB of archives.
179s After this operation, 2433 kB of additional disk space will be used.
179s Get:1 http://ftpmaster.internal/ubuntu plucky/universe s390x libhwloc15 s390x 2.12.0-1 [176 kB]
179s Get:2 http://ftpmaster.internal/ubuntu plucky/universe s390x libtbbbind-2-5 s390x 2022.0.0-2 [15.3 kB]
179s Get:3 http://ftpmaster.internal/ubuntu plucky/universe s390x libtbbmalloc2 s390x 2022.0.0-2 [57.7 kB]
179s Get:4 http://ftpmaster.internal/ubuntu plucky/universe s390x libtbb12 s390x 2022.0.0-2 [99.9 kB]
179s Get:5 http://ftpmaster.internal/ubuntu plucky/universe s390x twopaco s390x 1.0.0+dfsg-1 [356 kB]
180s Fetched 705 kB in 1s (615 kB/s)
180s Selecting previously unselected package libhwloc15:s390x.
180s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
180s Preparing to unpack .../libhwloc15_2.12.0-1_s390x.deb ...
180s Unpacking libhwloc15:s390x (2.12.0-1) ...
180s Selecting previously unselected package libtbbbind-2-5:s390x.
180s Preparing to unpack .../libtbbbind-2-5_2022.0.0-2_s390x.deb ...
180s Unpacking libtbbbind-2-5:s390x (2022.0.0-2) ...
180s Selecting previously unselected package libtbbmalloc2:s390x.
180s Preparing to unpack .../libtbbmalloc2_2022.0.0-2_s390x.deb ...
180s Unpacking libtbbmalloc2:s390x (2022.0.0-2) ...
180s Selecting previously unselected package libtbb12:s390x.
180s Preparing to unpack .../libtbb12_2022.0.0-2_s390x.deb ...
180s Unpacking libtbb12:s390x (2022.0.0-2) ...
180s Selecting previously unselected package twopaco.
180s Preparing to unpack .../twopaco_1.0.0+dfsg-1_s390x.deb ...
180s Unpacking twopaco (1.0.0+dfsg-1) ...
180s Setting up libtbbmalloc2:s390x (2022.0.0-2) ...
180s Setting up libhwloc15:s390x (2.12.0-1) ...
180s Setting up libtbbbind-2-5:s390x (2022.0.0-2) ...
180s Setting up libtbb12:s390x (2022.0.0-2) ...
180s Setting up twopaco (1.0.0+dfsg-1) ...
180s Processing triggers for man-db (2.13.0-1) ...
181s Processing triggers for libc-bin (2.41-1ubuntu2) ...
182s autopkgtest [14:01:28]: test run-unit-test: [-----------------------
184s Test # 0 PASSED
186s Test # 1 PASSED
188s Test # 2 PASSED
189s Test # 3 PASSED
191s Test # 4 PASSED
193s Test # 5 PASSED
195s Test # 6 PASSED
197s Test # 7 PASSED
199s Test # 8 PASSED
201s Test # 9 PASSED
201s Threads = 1
201s Vertex length = 11
201s Hash functions = 5
201s Filter size = 1048576
201s Capacity = 1
201s Files: 
201s example.fa
201s --------------------------------------------------------------------------------
201s Round 0, 0:1048576
201s Pass	Filling	Filtering
201s 1	0	0	
201s 2	0	0
201s True junctions count = 7
201s False junctions count = 0
201s Hash table size = 7
201s Candidate marks count = 16
201s --------------------------------------------------------------------------------
201s Reallocating bifurcations time: 0
201s True marks count: 16
201s Edges construction time: 0
201s --------------------------------------------------------------------------------
201s Distinct junctions = 7
201s 
201s TwoPaCo::buildGraphMain:: allocated with scalable_malloc; freeing.
201s TwoPaCo::buildGraphMain:: Calling scalable_allocation_command(TBBMALLOC_CLEAN_ALL_BUFFERS, 0);
201s autopkgtest [14:01:47]: test run-unit-test: -----------------------]
202s autopkgtest [14:01:48]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
202s run-unit-test        PASS
202s autopkgtest [14:01:48]: @@@@@@@@@@@@@@@@@@@@ summary
202s run-unit-test        PASS
210s nova [W] Using flock in prodstack6-s390x
210s Creating nova instance adt-plucky-s390x-twopaco-20250315-135826-juju-7f2275-prod-proposed-migration-environment-15-106041ed-5f02-43b4-9f07-29454a2de840 from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)...
210s nova [W] Timed out waiting for 4f168d25-f25c-4cff-a49d-6dd3541d7ea8 to get deleted.