0s autopkgtest [19:05:24]: starting date and time: 2025-03-15 19:05:24+0000
  0s autopkgtest [19:05:24]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  0s autopkgtest [19:05:24]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.5kq4il3a/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade seriation --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-s390x-11.secgroup --name adt-plucky-s390x-seriation-20250315-190524-juju-7f2275-prod-proposed-migration-environment-2-439165e6-21ed-4073-9489-60ecaea22204 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
135s autopkgtest [19:07:39]: testbed dpkg architecture: s390x
135s autopkgtest [19:07:39]: testbed apt version: 2.9.33
135s autopkgtest [19:07:39]: @@@@@@@@@@@@@@@@@@@@ test bed setup
136s autopkgtest [19:07:40]: testbed release detected to be: None
136s autopkgtest [19:07:40]: updating testbed package index (apt update)
137s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB]
137s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
137s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
137s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
137s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB]
137s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB]
137s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB]
138s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [113 kB]
138s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1824 B]
138s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B]
138s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [320 kB]
138s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [13.4 kB]
138s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3776 B]
138s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [240 B]
138s Fetched 1073 kB in 1s (760 kB/s)
139s Reading package lists...
139s Reading package lists...
139s Building dependency tree...
139s Reading state information...
139s Calculating upgrade...
140s Calculating upgrade...
140s The following packages were automatically installed and are no longer required:
140s   libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64
140s   linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic
140s   linux-modules-6.11.0-8-generic linux-tools-6.11.0-8
140s   linux-tools-6.11.0-8-generic
140s Use 'sudo apt autoremove' to remove them.
140s The following packages will be upgraded:
140s   pinentry-curses python3-jinja2 strace
140s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
140s Need to get 652 kB of archives.
140s After this operation, 27.6 kB of additional disk space will be used.
140s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB]
140s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x pinentry-curses s390x 1.3.1-2ubuntu3 [42.9 kB]
140s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB]
141s Fetched 652 kB in 1s (800 kB/s)
141s (Reading database ... 
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(Reading database ... 81428 files and directories currently installed.)
141s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ...
141s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ...
141s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_s390x.deb ...
141s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ...
141s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ...
141s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ...
141s Setting up pinentry-curses (1.3.1-2ubuntu3) ...
141s Setting up python3-jinja2 (3.1.5-2ubuntu1) ...
141s Setting up strace (6.13+ds-1ubuntu1) ...
141s Processing triggers for man-db (2.13.0-1) ...
142s Reading package lists...
142s Building dependency tree...
142s Reading state information...
142s Solving dependencies...
142s The following packages will be REMOVED:
142s   libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64*
142s   linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
142s   linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8*
142s   linux-tools-6.11.0-8-generic*
142s 0 upgraded, 0 newly installed, 9 to remove and 5 not upgraded.
142s After this operation, 167 MB disk space will be freed.
142s (Reading database ... 
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(Reading database ... 81428 files and directories currently installed.)
142s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
142s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
142s Removing libpython3.12t64:s390x (3.12.9-1) ...
142s Removing libpython3.12-stdlib:s390x (3.12.9-1) ...
142s Removing libnsl2:s390x (1.3.0-3build3) ...
142s Removing libpython3.12-minimal:s390x (3.12.9-1) ...
142s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
142s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
143s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
143s Processing triggers for libc-bin (2.41-1ubuntu1) ...
143s (Reading database ... 
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(Reading database ... 56328 files and directories currently installed.)
143s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ...
143s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
143s autopkgtest [19:07:47]: upgrading testbed (apt dist-upgrade and autopurge)
144s Reading package lists...
144s Building dependency tree...
144s Reading state information...
144s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
144s Starting 2 pkgProblemResolver with broken count: 0
144s Done
144s Entering ResolveByKeep
144s 
144s Calculating upgrade...
144s The following packages will be upgraded:
144s   libc-bin libc-dev-bin libc6 libc6-dev locales
144s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
144s Need to get 9512 kB of archives.
144s After this operation, 8192 B of additional disk space will be used.
144s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6-dev s390x 2.41-1ubuntu2 [1678 kB]
146s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-dev-bin s390x 2.41-1ubuntu2 [24.3 kB]
146s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6 s390x 2.41-1ubuntu2 [2892 kB]
148s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-bin s390x 2.41-1ubuntu2 [671 kB]
148s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x locales all 2.41-1ubuntu2 [4246 kB]
152s Preconfiguring packages ...
152s Fetched 9512 kB in 7s (1308 kB/s)
152s (Reading database ... 
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(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
152s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_s390x.deb ...
152s Unpacking libc6-dev:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
152s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_s390x.deb ...
152s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
152s Preparing to unpack .../libc6_2.41-1ubuntu2_s390x.deb ...
152s Unpacking libc6:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
152s Setting up libc6:s390x (2.41-1ubuntu2) ...
152s (Reading database ... 
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
152s Preparing to unpack .../libc-bin_2.41-1ubuntu2_s390x.deb ...
152s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
152s Setting up libc-bin (2.41-1ubuntu2) ...
152s (Reading database ... 
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(Reading database ... 56326 files and directories currently installed.)
152s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ...
152s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
152s Setting up locales (2.41-1ubuntu2) ...
153s Generating locales (this might take a while)...
154s   en_US.UTF-8... done
154s Generation complete.
154s Setting up libc-dev-bin (2.41-1ubuntu2) ...
154s Setting up libc6-dev:s390x (2.41-1ubuntu2) ...
154s Processing triggers for man-db (2.13.0-1) ...
154s Processing triggers for systemd (257.3-1ubuntu3) ...
155s Reading package lists...
155s Building dependency tree...
155s Reading state information...
155s Starting pkgProblemResolver with broken count: 0
155s Starting 2 pkgProblemResolver with broken count: 0
155s Done
156s Solving dependencies...
156s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
156s autopkgtest [19:08:00]: rebooting testbed after setup commands that affected boot
174s autopkgtest [19:08:18]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP Wed Mar 12 14:53:49 UTC 2025
176s autopkgtest [19:08:20]: @@@@@@@@@@@@@@@@@@@@ apt-source seriation
179s Get:1 http://ftpmaster.internal/ubuntu plucky/universe seriation 0.1+git20210125.fc7b8cb-1 (dsc) [2167 B]
179s Get:2 http://ftpmaster.internal/ubuntu plucky/universe seriation 0.1+git20210125.fc7b8cb-1 (tar) [1973 kB]
179s Get:3 http://ftpmaster.internal/ubuntu plucky/universe seriation 0.1+git20210125.fc7b8cb-1 (diff) [3824 B]
179s gpgv: Signature made Tue Dec 28 16:00:48 2021 UTC
179s gpgv:                using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1
179s gpgv:                issuer "nilesh@debian.org"
179s gpgv: Can't check signature: No public key
179s dpkg-source: warning: cannot verify inline signature for ./seriation_0.1+git20210125.fc7b8cb-1.dsc: no acceptable signature found
180s autopkgtest [19:08:24]: testing package seriation version 0.1+git20210125.fc7b8cb-1
180s autopkgtest [19:08:24]: build not needed
183s autopkgtest [19:08:27]: test run-unit-test: preparing testbed
183s Reading package lists...
183s Building dependency tree...
183s Reading state information...
183s Starting pkgProblemResolver with broken count: 0
183s Starting 2 pkgProblemResolver with broken count: 0
183s Done
184s The following NEW packages will be installed:
184s   seriation seriation-data
184s 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded.
184s Need to get 4082 kB of archives.
184s After this operation, 4506 kB of additional disk space will be used.
184s Get:1 http://ftpmaster.internal/ubuntu plucky/universe s390x seriation s390x 0.1+git20210125.fc7b8cb-1 [14.4 kB]
184s Get:2 http://ftpmaster.internal/ubuntu plucky/universe s390x seriation-data all 0.1+git20210125.fc7b8cb-1 [4068 kB]
187s Fetched 4082 kB in 4s (1160 kB/s)
187s Selecting previously unselected package seriation.
188s (Reading database ... 
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(Reading database ... 56326 files and directories currently installed.)
188s Preparing to unpack .../seriation_0.1+git20210125.fc7b8cb-1_s390x.deb ...
188s Unpacking seriation (0.1+git20210125.fc7b8cb-1) ...
188s Selecting previously unselected package seriation-data.
188s Preparing to unpack .../seriation-data_0.1+git20210125.fc7b8cb-1_all.deb ...
188s Unpacking seriation-data (0.1+git20210125.fc7b8cb-1) ...
188s Setting up seriation-data (0.1+git20210125.fc7b8cb-1) ...
188s Setting up seriation (0.1+git20210125.fc7b8cb-1) ...
188s Processing triggers for man-db (2.13.0-1) ...
189s autopkgtest [19:08:33]: test run-unit-test: [-----------------------
192s 
192s Usage: cfm-seriation [OPTION...]
192s 
192s  Seriation Parameters:
192s    f=[NETWORK FILE].dat       Network file path name
192s    o=[ORDER FILE].dat         Apply initial order
192s    i=[INTERVAL]               Number of isothermal steps
192s    m=[STEPS]                  Number of steps
192s    c=[FACTOR]                 Cooling factor
192s    a=[ALPHA]                  Alpha value
192s    p=[PERCENTUAL]             Percentual energy for initial temperature
192s    s=[SEDD]                   Random seed
192s    P                          Plot graphs
192s    v                          Generate video
192s 
192s Reading file...
192s 	Proteins: 3598
192s 	Interactions: 13687
192s Applying random order...
192s Saving initial order...
192s INITIAL Energy: 129696102
192s Ordering...
193s   1% [=                                                                                                   ]
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  9% [=========                                                                                           ]
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193s FINAL Energy: 127907414
193s Saving final order...
193s Done!
193s PASS
193s autopkgtest [19:08:37]: test run-unit-test: -----------------------]
194s run-unit-test        PASS
194s autopkgtest [19:08:38]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
194s autopkgtest [19:08:38]: @@@@@@@@@@@@@@@@@@@@ summary
194s run-unit-test        PASS
199s nova [W] Using flock in prodstack6-s390x
199s Creating nova instance adt-plucky-s390x-seriation-20250315-190524-juju-7f2275-prod-proposed-migration-environment-2-439165e6-21ed-4073-9489-60ecaea22204 from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)...
199s nova [W] Timed out waiting for f18990af-e929-4da4-94f2-f0b8d7319eb9 to get deleted.