0s autopkgtest [18:23:06]: starting date and time: 2025-03-15 18:23:06+0000
  0s autopkgtest [18:23:06]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  0s autopkgtest [18:23:06]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.juv_fc2x/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-rgenoud --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-s390x-15.secgroup --name adt-plucky-s390x-r-cran-rgenoud-20250315-182306-juju-7f2275-prod-proposed-migration-environment-2-f57e6cb4-9a6e-417d-a7a6-a9dc594d4ba0 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
105s autopkgtest [18:24:51]: testbed dpkg architecture: s390x
105s autopkgtest [18:24:51]: testbed apt version: 2.9.33
106s autopkgtest [18:24:52]: @@@@@@@@@@@@@@@@@@@@ test bed setup
106s autopkgtest [18:24:52]: testbed release detected to be: None
107s autopkgtest [18:24:53]: updating testbed package index (apt update)
107s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB]
107s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
108s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
108s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
108s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB]
108s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB]
108s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB]
108s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [113 kB]
108s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1824 B]
108s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B]
108s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [320 kB]
108s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [13.4 kB]
108s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3776 B]
108s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [240 B]
108s Fetched 1073 kB in 1s (1168 kB/s)
109s Reading package lists...
109s Reading package lists...
109s Building dependency tree...
109s Reading state information...
110s Calculating upgrade...
110s Calculating upgrade...
110s The following packages were automatically installed and are no longer required:
110s   libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64
110s   linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic
110s   linux-modules-6.11.0-8-generic linux-tools-6.11.0-8
110s   linux-tools-6.11.0-8-generic
110s Use 'sudo apt autoremove' to remove them.
110s The following packages will be upgraded:
110s   pinentry-curses python3-jinja2 strace
110s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
110s Need to get 652 kB of archives.
110s After this operation, 27.6 kB of additional disk space will be used.
110s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB]
110s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x pinentry-curses s390x 1.3.1-2ubuntu3 [42.9 kB]
110s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB]
111s Fetched 652 kB in 1s (1093 kB/s)
111s (Reading database ... 
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(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81428 files and directories currently installed.)
111s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ...
111s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ...
111s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_s390x.deb ...
111s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ...
111s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ...
111s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ...
111s Setting up pinentry-curses (1.3.1-2ubuntu3) ...
111s Setting up python3-jinja2 (3.1.5-2ubuntu1) ...
111s Setting up strace (6.13+ds-1ubuntu1) ...
111s Processing triggers for man-db (2.13.0-1) ...
111s Reading package lists...
112s Building dependency tree...
112s Reading state information...
112s Solving dependencies...
112s The following packages will be REMOVED:
112s   libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64*
112s   linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
112s   linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8*
112s   linux-tools-6.11.0-8-generic*
112s 0 upgraded, 0 newly installed, 9 to remove and 5 not upgraded.
112s After this operation, 167 MB disk space will be freed.
112s (Reading database ... 
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(Reading database ... 55%
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(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81428 files and directories currently installed.)
112s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
112s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
112s Removing libpython3.12t64:s390x (3.12.9-1) ...
112s Removing libpython3.12-stdlib:s390x (3.12.9-1) ...
112s Removing libnsl2:s390x (1.3.0-3build3) ...
112s Removing libpython3.12-minimal:s390x (3.12.9-1) ...
112s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
112s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
113s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
113s Processing triggers for libc-bin (2.41-1ubuntu1) ...
113s (Reading database ... 
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(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56328 files and directories currently installed.)
113s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ...
113s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
113s autopkgtest [18:24:59]: upgrading testbed (apt dist-upgrade and autopurge)
113s Reading package lists...
113s Building dependency tree...
113s Reading state information...
114s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
114s Starting 2 pkgProblemResolver with broken count: 0
114s Done
114s Entering ResolveByKeep
114s 
114s Calculating upgrade...
114s The following packages will be upgraded:
114s   libc-bin libc-dev-bin libc6 libc6-dev locales
114s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
114s Need to get 9512 kB of archives.
114s After this operation, 8192 B of additional disk space will be used.
114s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6-dev s390x 2.41-1ubuntu2 [1678 kB]
115s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-dev-bin s390x 2.41-1ubuntu2 [24.3 kB]
115s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6 s390x 2.41-1ubuntu2 [2892 kB]
115s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-bin s390x 2.41-1ubuntu2 [671 kB]
116s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x locales all 2.41-1ubuntu2 [4246 kB]
116s Preconfiguring packages ...
116s Fetched 9512 kB in 2s (4743 kB/s)
116s (Reading database ... 
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
116s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_s390x.deb ...
116s Unpacking libc6-dev:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
117s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_s390x.deb ...
117s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
117s Preparing to unpack .../libc6_2.41-1ubuntu2_s390x.deb ...
117s Unpacking libc6:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
117s Setting up libc6:s390x (2.41-1ubuntu2) ...
117s (Reading database ... 
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
117s Preparing to unpack .../libc-bin_2.41-1ubuntu2_s390x.deb ...
117s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
117s Setting up libc-bin (2.41-1ubuntu2) ...
117s (Reading database ... 
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(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
117s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ...
117s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
117s Setting up locales (2.41-1ubuntu2) ...
117s Generating locales (this might take a while)...
118s   en_US.UTF-8... done
118s Generation complete.
118s Setting up libc-dev-bin (2.41-1ubuntu2) ...
118s Setting up libc6-dev:s390x (2.41-1ubuntu2) ...
118s Processing triggers for man-db (2.13.0-1) ...
119s Processing triggers for systemd (257.3-1ubuntu3) ...
120s Reading package lists...
120s Building dependency tree...
120s Reading state information...
120s Starting pkgProblemResolver with broken count: 0
120s Starting 2 pkgProblemResolver with broken count: 0
120s Done
120s Solving dependencies...
120s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
120s autopkgtest [18:25:06]: rebooting testbed after setup commands that affected boot
140s autopkgtest [18:25:26]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP Wed Mar 12 14:53:49 UTC 2025
142s autopkgtest [18:25:28]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-rgenoud
144s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-rgenoud 5.9-0.11-1 (dsc) [2123 B]
144s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-rgenoud 5.9-0.11-1 (tar) [727 kB]
144s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-rgenoud 5.9-0.11-1 (diff) [2616 B]
144s gpgv: Signature made Tue Oct  1 23:53:43 2024 UTC
144s gpgv:                using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502
144s gpgv:                issuer "plessy@debian.org"
144s gpgv: Can't check signature: No public key
144s dpkg-source: warning: cannot verify inline signature for ./r-cran-rgenoud_5.9-0.11-1.dsc: no acceptable signature found
144s autopkgtest [18:25:30]: testing package r-cran-rgenoud version 5.9-0.11-1
145s autopkgtest [18:25:31]: build not needed
148s autopkgtest [18:25:34]: test run-unit-test: preparing testbed
149s Reading package lists...
149s Building dependency tree...
149s Reading state information...
149s Starting pkgProblemResolver with broken count: 0
149s Starting 2 pkgProblemResolver with broken count: 0
149s Done
149s The following NEW packages will be installed:
149s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3
149s   libcairo2 libdatrie1 libdeflate0 libfontconfig1 libfreetype6 libgfortran5
149s   libgomp1 libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8
149s   libjpeg8 liblapack3 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
149s   libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6
149s   libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0
149s   libxft2 libxrender1 libxss1 libxt6t64 r-base-core r-cran-brio r-cran-callr
149s   r-cran-cli r-cran-crayon r-cran-desc r-cran-diffobj r-cran-digest
149s   r-cran-evaluate r-cran-fs r-cran-glue r-cran-jsonlite r-cran-lifecycle
149s   r-cran-magrittr r-cran-pkgbuild r-cran-pkgload r-cran-praise r-cran-processx
149s   r-cran-ps r-cran-r6 r-cran-rgenoud r-cran-rlang r-cran-rprojroot
149s   r-cran-testthat r-cran-waldo r-cran-withr unzip x11-common xdg-utils zip
149s 0 upgraded, 69 newly installed, 0 to remove and 0 not upgraded.
149s Need to get 50.9 MB of archives.
149s After this operation, 99.0 MB of additional disk space will be used.
149s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB]
150s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB]
150s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB]
150s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-2ubuntu1 [37.5 kB]
150s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-2ubuntu1 [150 kB]
150s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig s390x 2.15.0-2ubuntu1 [191 kB]
150s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.1-2 [252 kB]
150s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB]
150s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB]
150s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B]
150s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB]
150s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB]
150s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB]
150s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.23-1 [46.1 kB]
150s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 15-20250222-0ubuntu1 [620 kB]
151s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 15-20250222-0ubuntu1 [152 kB]
151s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB]
151s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB]
151s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB]
151s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB]
151s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB]
151s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B]
151s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.1-2 [2971 kB]
151s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libthai-data all 0.1.29-2build1 [158 kB]
151s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB]
151s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x libpango-1.0-0 s390x 1.56.2-1 [253 kB]
151s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x libpangoft2-1.0-0 s390x 1.56.2-1 [50.2 kB]
151s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x libpangocairo-1.0-0 s390x 1.56.2-1 [28.2 kB]
151s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB]
151s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB]
152s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB]
152s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libsm6 s390x 2:1.2.4-1 [18.4 kB]
152s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB]
152s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB]
152s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB]
152s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB]
152s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB]
152s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B]
152s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.16-1 [830 kB]
152s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB]
152s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x zip s390x 3.0-14ubuntu2 [187 kB]
152s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x unzip s390x 6.0-28ubuntu6 [186 kB]
152s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
152s Get:44 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-core s390x 4.4.3-1 [28.6 MB]
158s Get:45 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-brio s390x 1.1.5-1 [38.6 kB]
158s Get:46 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ps s390x 1.9.0-1 [408 kB]
158s Get:47 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r6 all 2.6.1-1 [101 kB]
158s Get:48 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-processx s390x 3.8.6-1 [364 kB]
158s Get:49 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-callr all 3.7.6-1 [458 kB]
158s Get:50 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cli s390x 3.6.4-1 [1379 kB]
158s Get:51 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-crayon all 1.5.3-1 [165 kB]
159s Get:52 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-desc all 1.4.3-1 [359 kB]
159s Get:53 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-diffobj s390x 0.3.5-1 [1115 kB]
159s Get:54 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-digest s390x 0.6.37-1 [205 kB]
159s Get:55 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-evaluate all 1.0.3-1 [114 kB]
159s Get:56 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fs s390x 1.6.5+dfsg-1 [245 kB]
159s Get:57 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-glue s390x 1.8.0-1 [164 kB]
159s Get:58 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-jsonlite s390x 1.9.1+dfsg-1 [447 kB]
159s Get:59 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rlang s390x 1.1.5-1 [1713 kB]
159s Get:60 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
159s Get:61 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB]
159s Get:62 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgbuild all 1.4.6-1 [213 kB]
159s Get:63 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rprojroot all 2.0.4-2 [125 kB]
159s Get:64 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-withr all 3.0.2+dfsg-1 [214 kB]
159s Get:65 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgload all 1.4.0-1 [247 kB]
159s Get:66 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-praise all 1.0.0-4build1 [20.3 kB]
159s Get:67 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rgenoud s390x 5.9-0.11-1 [682 kB]
159s Get:68 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-waldo all 0.6.1-2 [150 kB]
159s Get:69 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-testthat s390x 3.2.3-1 [1641 kB]
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160s Preparing to unpack .../00-libfreetype6_2.13.3+dfsg-1_s390x.deb ...
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161s Selecting previously unselected package libpangocairo-1.0-0:s390x.
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161s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
161s Setting up libpixman-1-0:s390x (0.44.0-3) ...
161s Setting up libsharpyuv0:s390x (1.5.0-0.1) ...
161s Setting up libxrender1:s390x (1:0.9.10-1.1build1) ...
161s Setting up libdatrie1:s390x (0.2.13-3build1) ...
161s Setting up libxcb-render0:s390x (1.17.0-2) ...
161s Setting up unzip (6.0-28ubuntu6) ...
161s Setting up x11-common (1:7.7+23ubuntu3) ...
162s Setting up libdeflate0:s390x (1.23-1) ...
162s Setting up libxcb-shm0:s390x (1.17.0-2) ...
162s Setting up libgomp1:s390x (15-20250222-0ubuntu1) ...
162s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ...
162s Setting up zip (3.0-14ubuntu2) ...
162s Setting up libblas3:s390x (3.12.1-2) ...
162s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
162s Setting up libfreetype6:s390x (2.13.3+dfsg-1) ...
162s Setting up fonts-dejavu-mono (2.37-8) ...
162s Setting up libtcl8.6:s390x (8.6.16+dfsg-1) ...
162s Setting up fonts-dejavu-core (2.37-8) ...
162s Setting up libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ...
162s Setting up libgfortran5:s390x (15-20250222-0ubuntu1) ...
162s Setting up libwebp7:s390x (1.5.0-0.1) ...
162s Setting up libharfbuzz0b:s390x (10.2.0-1) ...
162s Setting up libthai-data (0.1.29-2build1) ...
162s Setting up libxss1:s390x (1:1.2.3-1build3) ...
162s Setting up libpaper2:s390x (2.2.5-0.3) ...
162s Setting up xdg-utils (1.2.1-2ubuntu1) ...
162s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
162s Setting up libjpeg8:s390x (8c-2ubuntu11) ...
162s Setting up libice6:s390x (2:1.1.1-1) ...
162s Setting up liblapack3:s390x (3.12.1-2) ...
162s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
162s Setting up fontconfig-config (2.15.0-2ubuntu1) ...
162s Setting up libpaper-utils (2.2.5-0.3) ...
162s Setting up libthai0:s390x (0.1.29-2build1) ...
162s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu4) ...
162s Setting up libfontconfig1:s390x (2.15.0-2ubuntu1) ...
162s Setting up libsm6:s390x (2:1.2.4-1) ...
162s Setting up fontconfig (2.15.0-2ubuntu1) ...
164s Regenerating fonts cache... done.
164s Setting up libxft2:s390x (2.3.6-1build1) ...
164s Setting up libtk8.6:s390x (8.6.16-1) ...
164s Setting up libpango-1.0-0:s390x (1.56.2-1) ...
164s Setting up libcairo2:s390x (1.18.2-2) ...
164s Setting up libxt6t64:s390x (1:1.2.1-1.2build1) ...
164s Setting up libpangoft2-1.0-0:s390x (1.56.2-1) ...
164s Setting up libpangocairo-1.0-0:s390x (1.56.2-1) ...
164s Setting up r-base-core (4.4.3-1) ...
164s Creating config file /etc/R/Renviron with new version
164s Setting up r-cran-crayon (1.5.3-1) ...
164s Setting up r-cran-rgenoud (5.9-0.11-1) ...
164s Setting up r-cran-ps (1.9.0-1) ...
164s Setting up r-cran-r6 (2.6.1-1) ...
164s Setting up r-cran-magrittr (2.0.3-1) ...
164s Setting up r-cran-fs (1.6.5+dfsg-1) ...
164s Setting up r-cran-brio (1.1.5-1) ...
164s Setting up r-cran-diffobj (0.3.5-1) ...
164s Setting up r-cran-rlang (1.1.5-1) ...
164s Setting up r-cran-withr (3.0.2+dfsg-1) ...
164s Setting up r-cran-processx (3.8.6-1) ...
164s Setting up r-cran-praise (1.0.0-4build1) ...
164s Setting up r-cran-digest (0.6.37-1) ...
164s Setting up r-cran-evaluate (1.0.3-1) ...
164s Setting up r-cran-glue (1.8.0-1) ...
164s Setting up r-cran-cli (3.6.4-1) ...
164s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
164s Setting up r-cran-rprojroot (2.0.4-2) ...
164s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ...
164s Setting up r-cran-waldo (0.6.1-2) ...
164s Setting up r-cran-callr (3.7.6-1) ...
164s Setting up r-cran-desc (1.4.3-1) ...
164s Setting up r-cran-pkgbuild (1.4.6-1) ...
164s Setting up r-cran-pkgload (1.4.0-1) ...
164s Setting up r-cran-testthat (3.2.3-1) ...
164s Processing triggers for libc-bin (2.41-1ubuntu2) ...
164s Processing triggers for man-db (2.13.0-1) ...
165s Processing triggers for install-info (7.1.1-1) ...
166s autopkgtest [18:25:52]: test run-unit-test: [-----------------------
166s BEGIN TEST testthat.R
166s 
166s R version 4.4.3 (2025-02-28) -- "Trophy Case"
166s Copyright (C) 2025 The R Foundation for Statistical Computing
166s Platform: s390x-ibm-linux-gnu
166s 
166s R is free software and comes with ABSOLUTELY NO WARRANTY.
166s You are welcome to redistribute it under certain conditions.
166s Type 'license()' or 'licence()' for distribution details.
166s 
166s R is a collaborative project with many contributors.
166s Type 'contributors()' for more information and
166s 'citation()' on how to cite R or R packages in publications.
166s 
166s Type 'demo()' for some demos, 'help()' for on-line help, or
166s 'help.start()' for an HTML browser interface to help.
166s Type 'q()' to quit R.
166s 
166s > library(testthat)
166s Loading required package: rgenoud
166s ##  rgenoud (Version 5.9-0.11, Build Date: 2024-10-03)
166s ##  See http://sekhon.berkeley.edu/rgenoud for additional documentation.
166s ##  Please cite software as:
166s ##   Walter Mebane, Jr. and Jasjeet S. Sekhon. 2011.
166s ##   ``Genetic Optimization Using Derivatives: The rgenoud package for R.''
166s ##   Journal of Statistical Software, 42(11): 1-26. 
166s ##
166s 
166s > 
166s > test_check("rgenoud")
173s [ FAIL 0 | WARN 0 | SKIP 1 | PASS 18 ]
173s 
173s == Skipped tests (1) ===========================================================
173s * Not run on non-mac platforms due to non-deterministic randomness in
173s   implementation of std::uniform_int_distribution across different compilers.
173s   Test cases were written only for macOS (clang). We have not had time to write
173s   tests for other compilers like gcc yet. (1): 'test-genoud_fixed_seed.R:54:3'
173s 
173s [ FAIL 0 | WARN 0 | SKIP 1 | PASS 18 ]
173s > 
173s autopkgtest [18:25:59]: test run-unit-test: -----------------------]
174s autopkgtest [18:26:00]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
174s run-unit-test        PASS
174s autopkgtest [18:26:00]: test pkg-r-autopkgtest: preparing testbed
174s Reading package lists...
174s Building dependency tree...
174s Reading state information...
175s Starting pkgProblemResolver with broken count: 0
175s Starting 2 pkgProblemResolver with broken count: 0
175s Done
175s The following NEW packages will be installed:
175s   build-essential cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu
175s   dctrl-tools g++ g++-14 g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14
175s   gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-14
175s   gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools libasan8
175s   libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev
175s   libgfortran-14-dev libicu-dev libisl23 libitm1 libjpeg-dev
175s   libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblzma-dev libmpc3
175s   libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
175s   libpkgconf3 libpng-dev libreadline-dev libstdc++-14-dev libtirpc-dev
175s   libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev zlib1g-dev
175s 0 upgraded, 51 newly installed, 0 to remove and 0 not upgraded.
175s Need to get 82.3 MB of archives.
175s After this operation, 279 MB of additional disk space will be used.
175s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libisl23 s390x 0.27-1 [704 kB]
175s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB]
175s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [9572 kB]
177s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14 s390x 14.2.0-17ubuntu3 [1028 B]
177s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [5556 B]
177s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x cpp s390x 4:14.2.0-1ubuntu1 [22.4 kB]
177s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libcc1-0 s390x 15-20250222-0ubuntu1 [49.2 kB]
177s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libitm1 s390x 15-20250222-0ubuntu1 [31.2 kB]
177s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libasan8 s390x 15-20250222-0ubuntu1 [2970 kB]
178s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libubsan1 s390x 15-20250222-0ubuntu1 [1212 kB]
178s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-14-dev s390x 14.2.0-17ubuntu3 [1037 kB]
178s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [18.7 MB]
181s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14 s390x 14.2.0-17ubuntu3 [526 kB]
182s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1204 B]
182s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x gcc s390x 4:14.2.0-1ubuntu1 [5004 B]
182s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++-14-dev s390x 14.2.0-17ubuntu3 [2611 kB]
182s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [11.0 MB]
184s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14 s390x 14.2.0-17ubuntu3 [21.8 kB]
184s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x g++-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [956 B]
184s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x g++ s390x 4:14.2.0-1ubuntu1 [1080 B]
184s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x build-essential s390x 12.10ubuntu1 [4930 B]
184s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x dctrl-tools s390x 2.24-3build3 [106 kB]
184s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran-14-dev s390x 14.2.0-17ubuntu3 [654 kB]
184s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [10.3 MB]
187s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14 s390x 14.2.0-17ubuntu3 [13.6 kB]
187s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1012 B]
187s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran s390x 4:14.2.0-1ubuntu1 [1160 B]
187s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x icu-devtools s390x 76.1-1ubuntu2 [225 kB]
187s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x libblas-dev s390x 3.12.1-2 [254 kB]
187s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libbz2-dev s390x 1.0.8-6 [39.1 kB]
187s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate-dev s390x 1.23-1 [52.2 kB]
187s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libicu-dev s390x 76.1-1ubuntu2 [12.2 MB]
190s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8-dev s390x 2.1.5-3ubuntu2 [281 kB]
190s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B]
190s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B]
190s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack-dev s390x 3.12.1-2 [5967 kB]
191s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libncurses-dev s390x 6.5+20250216-2 [407 kB]
191s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-16-0 s390x 10.45-1 [259 kB]
191s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-32-0 s390x 10.45-1 [245 kB]
192s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-posix3 s390x 10.45-1 [7080 B]
192s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-dev s390x 10.45-1 [899 kB]
192s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libpkgconf3 s390x 1.8.1-4 [31.2 kB]
192s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB]
192s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x libpng-dev s390x 1.6.47-1 [278 kB]
192s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libreadline-dev s390x 8.2-6 [187 kB]
192s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x liblzma-dev s390x 5.6.4-1 [183 kB]
192s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf-bin s390x 1.8.1-4 [21.5 kB]
192s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf s390x 1.8.1-4 [16.7 kB]
192s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x libtirpc-dev s390x 1.3.4+ds-1.3 [196 kB]
192s Get:50 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-dev all 4.4.3-1 [4176 B]
192s Get:51 http://ftpmaster.internal/ubuntu plucky/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
192s Fetched 82.3 MB in 17s (4734 kB/s)
192s Selecting previously unselected package libisl23:s390x.
193s (Reading database ... 
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(Reading database ... 61251 files and directories currently installed.)
193s Preparing to unpack .../00-libisl23_0.27-1_s390x.deb ...
193s Unpacking libisl23:s390x (0.27-1) ...
193s Selecting previously unselected package libmpc3:s390x.
193s Preparing to unpack .../01-libmpc3_1.3.1-1build2_s390x.deb ...
193s Unpacking libmpc3:s390x (1.3.1-1build2) ...
193s Selecting previously unselected package cpp-14-s390x-linux-gnu.
193s Preparing to unpack .../02-cpp-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
193s Unpacking cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
193s Selecting previously unselected package cpp-14.
193s Preparing to unpack .../03-cpp-14_14.2.0-17ubuntu3_s390x.deb ...
193s Unpacking cpp-14 (14.2.0-17ubuntu3) ...
193s Selecting previously unselected package cpp-s390x-linux-gnu.
193s Preparing to unpack .../04-cpp-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
193s Unpacking cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
193s Selecting previously unselected package cpp.
193s Preparing to unpack .../05-cpp_4%3a14.2.0-1ubuntu1_s390x.deb ...
193s Unpacking cpp (4:14.2.0-1ubuntu1) ...
193s Selecting previously unselected package libcc1-0:s390x.
193s Preparing to unpack .../06-libcc1-0_15-20250222-0ubuntu1_s390x.deb ...
193s Unpacking libcc1-0:s390x (15-20250222-0ubuntu1) ...
193s Selecting previously unselected package libitm1:s390x.
193s Preparing to unpack .../07-libitm1_15-20250222-0ubuntu1_s390x.deb ...
193s Unpacking libitm1:s390x (15-20250222-0ubuntu1) ...
193s Selecting previously unselected package libasan8:s390x.
193s Preparing to unpack .../08-libasan8_15-20250222-0ubuntu1_s390x.deb ...
193s Unpacking libasan8:s390x (15-20250222-0ubuntu1) ...
193s Selecting previously unselected package libubsan1:s390x.
193s Preparing to unpack .../09-libubsan1_15-20250222-0ubuntu1_s390x.deb ...
193s Unpacking libubsan1:s390x (15-20250222-0ubuntu1) ...
193s Selecting previously unselected package libgcc-14-dev:s390x.
193s Preparing to unpack .../10-libgcc-14-dev_14.2.0-17ubuntu3_s390x.deb ...
193s Unpacking libgcc-14-dev:s390x (14.2.0-17ubuntu3) ...
193s Selecting previously unselected package gcc-14-s390x-linux-gnu.
193s Preparing to unpack .../11-gcc-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
193s Unpacking gcc-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
193s Selecting previously unselected package gcc-14.
193s Preparing to unpack .../12-gcc-14_14.2.0-17ubuntu3_s390x.deb ...
193s Unpacking gcc-14 (14.2.0-17ubuntu3) ...
193s Selecting previously unselected package gcc-s390x-linux-gnu.
193s Preparing to unpack .../13-gcc-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
193s Unpacking gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
193s Selecting previously unselected package gcc.
193s Preparing to unpack .../14-gcc_4%3a14.2.0-1ubuntu1_s390x.deb ...
193s Unpacking gcc (4:14.2.0-1ubuntu1) ...
193s Selecting previously unselected package libstdc++-14-dev:s390x.
193s Preparing to unpack .../15-libstdc++-14-dev_14.2.0-17ubuntu3_s390x.deb ...
193s Unpacking libstdc++-14-dev:s390x (14.2.0-17ubuntu3) ...
193s Selecting previously unselected package g++-14-s390x-linux-gnu.
193s Preparing to unpack .../16-g++-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
193s Unpacking g++-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
193s Selecting previously unselected package g++-14.
193s Preparing to unpack .../17-g++-14_14.2.0-17ubuntu3_s390x.deb ...
193s Unpacking g++-14 (14.2.0-17ubuntu3) ...
193s Selecting previously unselected package g++-s390x-linux-gnu.
193s Preparing to unpack .../18-g++-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
193s Unpacking g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
193s Selecting previously unselected package g++.
193s Preparing to unpack .../19-g++_4%3a14.2.0-1ubuntu1_s390x.deb ...
193s Unpacking g++ (4:14.2.0-1ubuntu1) ...
193s Selecting previously unselected package build-essential.
193s Preparing to unpack .../20-build-essential_12.10ubuntu1_s390x.deb ...
193s Unpacking build-essential (12.10ubuntu1) ...
193s Selecting previously unselected package dctrl-tools.
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193s Unpacking dctrl-tools (2.24-3build3) ...
193s Selecting previously unselected package libgfortran-14-dev:s390x.
193s Preparing to unpack .../22-libgfortran-14-dev_14.2.0-17ubuntu3_s390x.deb ...
193s Unpacking libgfortran-14-dev:s390x (14.2.0-17ubuntu3) ...
193s Selecting previously unselected package gfortran-14-s390x-linux-gnu.
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193s Unpacking gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
194s Selecting previously unselected package gfortran-14.
194s Preparing to unpack .../24-gfortran-14_14.2.0-17ubuntu3_s390x.deb ...
194s Unpacking gfortran-14 (14.2.0-17ubuntu3) ...
194s Selecting previously unselected package gfortran-s390x-linux-gnu.
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194s Unpacking gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
194s Selecting previously unselected package gfortran.
194s Preparing to unpack .../26-gfortran_4%3a14.2.0-1ubuntu1_s390x.deb ...
194s Unpacking gfortran (4:14.2.0-1ubuntu1) ...
194s Selecting previously unselected package icu-devtools.
194s Preparing to unpack .../27-icu-devtools_76.1-1ubuntu2_s390x.deb ...
194s Unpacking icu-devtools (76.1-1ubuntu2) ...
194s Selecting previously unselected package libblas-dev:s390x.
194s Preparing to unpack .../28-libblas-dev_3.12.1-2_s390x.deb ...
194s Unpacking libblas-dev:s390x (3.12.1-2) ...
194s Selecting previously unselected package libbz2-dev:s390x.
194s Preparing to unpack .../29-libbz2-dev_1.0.8-6_s390x.deb ...
194s Unpacking libbz2-dev:s390x (1.0.8-6) ...
194s Selecting previously unselected package libdeflate-dev:s390x.
194s Preparing to unpack .../30-libdeflate-dev_1.23-1_s390x.deb ...
194s Unpacking libdeflate-dev:s390x (1.23-1) ...
194s Selecting previously unselected package libicu-dev:s390x.
194s Preparing to unpack .../31-libicu-dev_76.1-1ubuntu2_s390x.deb ...
194s Unpacking libicu-dev:s390x (76.1-1ubuntu2) ...
194s Selecting previously unselected package libjpeg-turbo8-dev:s390x.
194s Preparing to unpack .../32-libjpeg-turbo8-dev_2.1.5-3ubuntu2_s390x.deb ...
194s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ...
194s Selecting previously unselected package libjpeg8-dev:s390x.
194s Preparing to unpack .../33-libjpeg8-dev_8c-2ubuntu11_s390x.deb ...
194s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ...
194s Selecting previously unselected package libjpeg-dev:s390x.
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194s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ...
194s Selecting previously unselected package liblapack-dev:s390x.
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194s Unpacking liblapack-dev:s390x (3.12.1-2) ...
194s Selecting previously unselected package libncurses-dev:s390x.
194s Preparing to unpack .../36-libncurses-dev_6.5+20250216-2_s390x.deb ...
194s Unpacking libncurses-dev:s390x (6.5+20250216-2) ...
194s Selecting previously unselected package libpcre2-16-0:s390x.
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194s Unpacking libpcre2-16-0:s390x (10.45-1) ...
194s Selecting previously unselected package libpcre2-32-0:s390x.
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194s Unpacking libpcre2-32-0:s390x (10.45-1) ...
194s Selecting previously unselected package libpcre2-posix3:s390x.
194s Preparing to unpack .../39-libpcre2-posix3_10.45-1_s390x.deb ...
194s Unpacking libpcre2-posix3:s390x (10.45-1) ...
194s Selecting previously unselected package libpcre2-dev:s390x.
194s Preparing to unpack .../40-libpcre2-dev_10.45-1_s390x.deb ...
194s Unpacking libpcre2-dev:s390x (10.45-1) ...
194s Selecting previously unselected package libpkgconf3:s390x.
194s Preparing to unpack .../41-libpkgconf3_1.8.1-4_s390x.deb ...
194s Unpacking libpkgconf3:s390x (1.8.1-4) ...
194s Selecting previously unselected package zlib1g-dev:s390x.
194s Preparing to unpack .../42-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_s390x.deb ...
194s Unpacking zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
194s Selecting previously unselected package libpng-dev:s390x.
194s Preparing to unpack .../43-libpng-dev_1.6.47-1_s390x.deb ...
194s Unpacking libpng-dev:s390x (1.6.47-1) ...
194s Selecting previously unselected package libreadline-dev:s390x.
194s Preparing to unpack .../44-libreadline-dev_8.2-6_s390x.deb ...
194s Unpacking libreadline-dev:s390x (8.2-6) ...
194s Selecting previously unselected package liblzma-dev:s390x.
194s Preparing to unpack .../45-liblzma-dev_5.6.4-1_s390x.deb ...
194s Unpacking liblzma-dev:s390x (5.6.4-1) ...
194s Selecting previously unselected package pkgconf-bin.
194s Preparing to unpack .../46-pkgconf-bin_1.8.1-4_s390x.deb ...
194s Unpacking pkgconf-bin (1.8.1-4) ...
194s Selecting previously unselected package pkgconf:s390x.
194s Preparing to unpack .../47-pkgconf_1.8.1-4_s390x.deb ...
194s Unpacking pkgconf:s390x (1.8.1-4) ...
194s Selecting previously unselected package libtirpc-dev:s390x.
194s Preparing to unpack .../48-libtirpc-dev_1.3.4+ds-1.3_s390x.deb ...
194s Unpacking libtirpc-dev:s390x (1.3.4+ds-1.3) ...
194s Selecting previously unselected package r-base-dev.
194s Preparing to unpack .../49-r-base-dev_4.4.3-1_all.deb ...
194s Unpacking r-base-dev (4.4.3-1) ...
194s Selecting previously unselected package pkg-r-autopkgtest.
194s Preparing to unpack .../50-pkg-r-autopkgtest_20231212ubuntu1_all.deb ...
194s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ...
194s Setting up libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ...
194s Setting up libncurses-dev:s390x (6.5+20250216-2) ...
194s Setting up libreadline-dev:s390x (8.2-6) ...
194s Setting up libpcre2-16-0:s390x (10.45-1) ...
194s Setting up libpcre2-32-0:s390x (10.45-1) ...
194s Setting up libtirpc-dev:s390x (1.3.4+ds-1.3) ...
194s Setting up libpkgconf3:s390x (1.8.1-4) ...
194s Setting up libmpc3:s390x (1.3.1-1build2) ...
194s Setting up icu-devtools (76.1-1ubuntu2) ...
194s Setting up pkgconf-bin (1.8.1-4) ...
194s Setting up liblzma-dev:s390x (5.6.4-1) ...
194s Setting up libubsan1:s390x (15-20250222-0ubuntu1) ...
194s Setting up zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
194s Setting up libpcre2-posix3:s390x (10.45-1) ...
194s Setting up libasan8:s390x (15-20250222-0ubuntu1) ...
194s Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ...
194s Setting up libisl23:s390x (0.27-1) ...
194s Setting up libdeflate-dev:s390x (1.23-1) ...
194s Setting up libicu-dev:s390x (76.1-1ubuntu2) ...
194s Setting up libcc1-0:s390x (15-20250222-0ubuntu1) ...
194s Setting up libblas-dev:s390x (3.12.1-2) ...
194s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so to provide /usr/lib/s390x-linux-gnu/libblas.so (libblas.so-s390x-linux-gnu) in auto mode
194s Setting up dctrl-tools (2.24-3build3) ...
194s Setting up libitm1:s390x (15-20250222-0ubuntu1) ...
194s Setting up libbz2-dev:s390x (1.0.8-6) ...
194s Setting up libpcre2-dev:s390x (10.45-1) ...
194s Setting up libpng-dev:s390x (1.6.47-1) ...
194s Setting up libjpeg-dev:s390x (8c-2ubuntu11) ...
194s Setting up pkgconf:s390x (1.8.1-4) ...
194s Setting up liblapack-dev:s390x (3.12.1-2) ...
194s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode
194s Setting up cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
194s Setting up cpp-14 (14.2.0-17ubuntu3) ...
194s Setting up libgcc-14-dev:s390x (14.2.0-17ubuntu3) ...
194s Setting up libstdc++-14-dev:s390x (14.2.0-17ubuntu3) ...
194s Setting up libgfortran-14-dev:s390x (14.2.0-17ubuntu3) ...
194s Setting up cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
194s Setting up gcc-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
194s Setting up gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
194s Setting up g++-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
194s Setting up cpp (4:14.2.0-1ubuntu1) ...
194s Setting up gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
194s Setting up g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
194s Setting up gcc-14 (14.2.0-17ubuntu3) ...
194s Setting up g++-14 (14.2.0-17ubuntu3) ...
194s Setting up gfortran-14 (14.2.0-17ubuntu3) ...
194s Setting up gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
194s Setting up gcc (4:14.2.0-1ubuntu1) ...
194s Setting up g++ (4:14.2.0-1ubuntu1) ...
194s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
194s Setting up build-essential (12.10ubuntu1) ...
194s Setting up gfortran (4:14.2.0-1ubuntu1) ...
194s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
194s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
194s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
194s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
194s Setting up r-base-dev (4.4.3-1) ...
194s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
194s Processing triggers for libc-bin (2.41-1ubuntu2) ...
194s Processing triggers for man-db (2.13.0-1) ...
194s Processing triggers for install-info (7.1.1-1) ...
195s autopkgtest [18:26:21]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
195s autopkgtest [18:26:21]: test pkg-r-autopkgtest: [-----------------------
195s Test: Try to load the R library rgenoud
195s 
195s R version 4.4.3 (2025-02-28) -- "Trophy Case"
195s Copyright (C) 2025 The R Foundation for Statistical Computing
195s Platform: s390x-ibm-linux-gnu
195s 
195s R is free software and comes with ABSOLUTELY NO WARRANTY.
195s You are welcome to redistribute it under certain conditions.
195s Type 'license()' or 'licence()' for distribution details.
195s 
195s R is a collaborative project with many contributors.
195s Type 'contributors()' for more information and
195s 'citation()' on how to cite R or R packages in publications.
195s 
195s Type 'demo()' for some demos, 'help()' for on-line help, or
195s 'help.start()' for an HTML browser interface to help.
195s Type 'q()' to quit R.
195s 
195s > library('rgenoud')
195s ##  rgenoud (Version 5.9-0.11, Build Date: 2024-10-03)
195s ##  See http://sekhon.berkeley.edu/rgenoud for additional documentation.
195s ##  Please cite software as:
195s ##   Walter Mebane, Jr. and Jasjeet S. Sekhon. 2011.
195s ##   ``Genetic Optimization Using Derivatives: The rgenoud package for R.''
195s ##   Journal of Statistical Software, 42(11): 1-26. 
195s ##
195s 
195s > 
195s > 
195s Other tests are currently unsupported!
195s They will be progressively added.
196s autopkgtest [18:26:22]: test pkg-r-autopkgtest: -----------------------]
196s autopkgtest [18:26:22]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
196s pkg-r-autopkgtest    PASS
197s autopkgtest [18:26:23]: @@@@@@@@@@@@@@@@@@@@ summary
197s run-unit-test        PASS
197s pkg-r-autopkgtest    PASS
216s nova [W] Using flock in prodstack6-s390x
216s flock: timeout while waiting to get lock
216s Creating nova instance adt-plucky-s390x-r-cran-rgenoud-20250315-182306-juju-7f2275-prod-proposed-migration-environment-2-f57e6cb4-9a6e-417d-a7a6-a9dc594d4ba0 from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)...
216s nova [W] Timed out waiting for 0533927c-180b-40da-8a8c-fe19ea5e42eb to get deleted.