0s autopkgtest [18:22:07]: starting date and time: 2025-03-15 18:22:07+0000
  1s autopkgtest [18:22:08]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  1s autopkgtest [18:22:08]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.q564j7f7/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-rcppmlpack --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-s390x-13.secgroup --name adt-plucky-s390x-r-cran-rcppmlpack-20250315-182207-juju-7f2275-prod-proposed-migration-environment-2-c9f67814-9269-4292-a553-e3c3d6af2242 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
109s autopkgtest [18:23:56]: testbed dpkg architecture: s390x
110s autopkgtest [18:23:57]: testbed apt version: 2.9.33
110s autopkgtest [18:23:57]: @@@@@@@@@@@@@@@@@@@@ test bed setup
110s autopkgtest [18:23:57]: testbed release detected to be: None
111s autopkgtest [18:23:58]: updating testbed package index (apt update)
111s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB]
111s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
111s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
111s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
111s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB]
112s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB]
112s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB]
112s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [113 kB]
112s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1824 B]
112s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B]
112s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [320 kB]
112s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [13.4 kB]
112s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3776 B]
112s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [240 B]
112s Fetched 1073 kB in 1s (963 kB/s)
113s Reading package lists...
113s Reading package lists...
114s Building dependency tree...
114s Reading state information...
114s Calculating upgrade...
114s Calculating upgrade...
114s The following packages were automatically installed and are no longer required:
114s   libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64
114s   linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic
114s   linux-modules-6.11.0-8-generic linux-tools-6.11.0-8
114s   linux-tools-6.11.0-8-generic
114s Use 'sudo apt autoremove' to remove them.
114s The following packages will be upgraded:
114s   pinentry-curses python3-jinja2 strace
114s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
114s Need to get 652 kB of archives.
114s After this operation, 27.6 kB of additional disk space will be used.
114s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB]
114s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x pinentry-curses s390x 1.3.1-2ubuntu3 [42.9 kB]
114s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB]
115s Fetched 652 kB in 1s (902 kB/s)
115s (Reading database ... 
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(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81428 files and directories currently installed.)
115s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ...
115s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ...
115s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_s390x.deb ...
115s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ...
115s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ...
115s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ...
115s Setting up pinentry-curses (1.3.1-2ubuntu3) ...
115s Setting up python3-jinja2 (3.1.5-2ubuntu1) ...
115s Setting up strace (6.13+ds-1ubuntu1) ...
115s Processing triggers for man-db (2.13.0-1) ...
116s Reading package lists...
116s Building dependency tree...
116s Reading state information...
116s Solving dependencies...
116s The following packages will be REMOVED:
116s   libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64*
116s   linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
116s   linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8*
116s   linux-tools-6.11.0-8-generic*
116s 0 upgraded, 0 newly installed, 9 to remove and 5 not upgraded.
116s After this operation, 167 MB disk space will be freed.
116s (Reading database ... 
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(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81428 files and directories currently installed.)
116s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
116s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
116s Removing libpython3.12t64:s390x (3.12.9-1) ...
116s Removing libpython3.12-stdlib:s390x (3.12.9-1) ...
116s Removing libnsl2:s390x (1.3.0-3build3) ...
116s Removing libpython3.12-minimal:s390x (3.12.9-1) ...
116s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
116s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
117s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
117s Processing triggers for libc-bin (2.41-1ubuntu1) ...
117s (Reading database ... 
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(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56328 files and directories currently installed.)
117s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ...
117s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
117s autopkgtest [18:24:04]: upgrading testbed (apt dist-upgrade and autopurge)
118s Reading package lists...
118s Building dependency tree...
118s Reading state information...
118s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
118s Starting 2 pkgProblemResolver with broken count: 0
118s Done
118s Entering ResolveByKeep
118s 
118s Calculating upgrade...
118s The following packages will be upgraded:
118s   libc-bin libc-dev-bin libc6 libc6-dev locales
118s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
118s Need to get 9512 kB of archives.
118s After this operation, 8192 B of additional disk space will be used.
118s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6-dev s390x 2.41-1ubuntu2 [1678 kB]
119s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-dev-bin s390x 2.41-1ubuntu2 [24.3 kB]
119s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6 s390x 2.41-1ubuntu2 [2892 kB]
120s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-bin s390x 2.41-1ubuntu2 [671 kB]
121s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x locales all 2.41-1ubuntu2 [4246 kB]
122s Preconfiguring packages ...
122s Fetched 9512 kB in 3s (2795 kB/s)
122s (Reading database ... 
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
122s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_s390x.deb ...
122s Unpacking libc6-dev:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
122s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_s390x.deb ...
122s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
122s Preparing to unpack .../libc6_2.41-1ubuntu2_s390x.deb ...
122s Unpacking libc6:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
122s Setting up libc6:s390x (2.41-1ubuntu2) ...
122s (Reading database ... 
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
122s Preparing to unpack .../libc-bin_2.41-1ubuntu2_s390x.deb ...
122s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
122s Setting up libc-bin (2.41-1ubuntu2) ...
122s (Reading database ... 
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(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
122s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ...
122s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
122s Setting up locales (2.41-1ubuntu2) ...
123s Generating locales (this might take a while)...
124s   en_US.UTF-8... done
124s Generation complete.
124s Setting up libc-dev-bin (2.41-1ubuntu2) ...
124s Setting up libc6-dev:s390x (2.41-1ubuntu2) ...
124s Processing triggers for man-db (2.13.0-1) ...
124s Processing triggers for systemd (257.3-1ubuntu3) ...
124s Reading package lists...
125s Building dependency tree...
125s Reading state information...
125s Starting pkgProblemResolver with broken count: 0
125s Starting 2 pkgProblemResolver with broken count: 0
125s Done
125s Solving dependencies...
125s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
125s autopkgtest [18:24:12]: rebooting testbed after setup commands that affected boot
145s autopkgtest [18:24:32]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP Wed Mar 12 14:53:49 UTC 2025
148s autopkgtest [18:24:35]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-rcppmlpack
150s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-rcppmlpack 1.0.10-7-2 (dsc) [2185 B]
150s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-rcppmlpack 1.0.10-7-2 (tar) [712 kB]
150s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-rcppmlpack 1.0.10-7-2 (diff) [5000 B]
150s gpgv: Signature made Tue Feb 23 15:06:23 2021 UTC
150s gpgv:                using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1
150s gpgv:                issuer "npatra974@gmail.com"
150s gpgv: Can't check signature: No public key
150s dpkg-source: warning: cannot verify inline signature for ./r-cran-rcppmlpack_1.0.10-7-2.dsc: no acceptable signature found
150s autopkgtest [18:24:37]: testing package r-cran-rcppmlpack version 1.0.10-7-2
151s autopkgtest [18:24:38]: build not needed
153s autopkgtest [18:24:40]: test vignette: preparing testbed
153s Reading package lists...
153s Building dependency tree...
153s Reading state information...
153s Starting pkgProblemResolver with broken count: 0
153s Starting 2 pkgProblemResolver with broken count: 0
153s Done
153s The following NEW packages will be installed:
153s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libasan8
153s   libblas3 libboost-dev libboost1.83-dev libcairo2 libdatrie1 libdeflate0
153s   libfontconfig1 libfreetype6 libgcc-14-dev libgfortran5 libgomp1
153s   libgraphite2-3 libharfbuzz0b libice6 libitm1 libjbig0 libjpeg-turbo8
153s   libjpeg8 liblapack3 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
153s   libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libstdc++-14-dev
153s   libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 libubsan1 libwebp7
153s   libxcb-render0 libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 littler
153s   r-base-core r-cran-bh r-cran-littler r-cran-pkgkitten r-cran-rcpp
153s   r-cran-rcpparmadillo r-cran-rcppmlpack unzip x11-common xdg-utils zip
153s 0 upgraded, 58 newly installed, 0 to remove and 0 not upgraded.
153s Need to get 62.4 MB of archives.
153s After this operation, 309 MB of additional disk space will be used.
153s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB]
154s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB]
154s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB]
155s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-2ubuntu1 [37.5 kB]
155s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-2ubuntu1 [150 kB]
155s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig s390x 2.15.0-2ubuntu1 [191 kB]
155s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libasan8 s390x 15-20250222-0ubuntu1 [2970 kB]
156s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.1-2 [252 kB]
157s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 15-20250222-0ubuntu1 [152 kB]
157s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libitm1 s390x 15-20250222-0ubuntu1 [31.2 kB]
157s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libubsan1 s390x 15-20250222-0ubuntu1 [1212 kB]
157s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-14-dev s390x 14.2.0-17ubuntu3 [1037 kB]
157s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++-14-dev s390x 14.2.0-17ubuntu3 [2611 kB]
158s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x libboost1.83-dev s390x 1.83.0-4.1ubuntu2 [10.7 MB]
161s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x libboost-dev s390x 1.83.0.2ubuntu1 [4470 B]
161s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB]
161s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB]
161s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B]
161s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB]
161s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB]
161s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB]
162s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.23-1 [46.1 kB]
162s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 15-20250222-0ubuntu1 [620 kB]
162s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB]
162s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB]
162s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB]
162s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB]
162s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB]
162s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B]
162s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.1-2 [2971 kB]
163s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libthai-data all 0.1.29-2build1 [158 kB]
163s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB]
163s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libpango-1.0-0 s390x 1.56.2-1 [253 kB]
163s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libpangoft2-1.0-0 s390x 1.56.2-1 [50.2 kB]
163s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libpangocairo-1.0-0 s390x 1.56.2-1 [28.2 kB]
163s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB]
163s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB]
163s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB]
163s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libsm6 s390x 2:1.2.4-1 [18.4 kB]
163s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB]
163s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB]
163s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB]
163s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB]
163s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB]
163s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B]
163s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.16-1 [830 kB]
163s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB]
163s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x zip s390x 3.0-14ubuntu2 [187 kB]
163s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x unzip s390x 6.0-28ubuntu6 [186 kB]
164s Get:50 http://ftpmaster.internal/ubuntu plucky/main s390x xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
164s Get:51 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-core s390x 4.4.3-1 [28.6 MB]
168s Get:52 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-littler s390x 0.3.20-2 [95.0 kB]
168s Get:53 http://ftpmaster.internal/ubuntu plucky/universe s390x littler all 0.3.20-2 [2554 B]
168s Get:54 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bh all 1.84.0-1 [5962 B]
168s Get:55 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
168s Get:56 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcpp s390x 1.0.14-1 [2003 kB]
168s Get:57 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcpparmadillo s390x 14.2.3-1-1 [851 kB]
168s Get:58 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcppmlpack s390x 1.0.10-7-2 [790 kB]
168s Preconfiguring packages ...
168s Fetched 62.4 MB in 15s (4176 kB/s)
169s Selecting previously unselected package libfreetype6:s390x.
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169s Preparing to unpack .../00-libfreetype6_2.13.3+dfsg-1_s390x.deb ...
169s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ...
169s Selecting previously unselected package fonts-dejavu-mono.
169s Preparing to unpack .../01-fonts-dejavu-mono_2.37-8_all.deb ...
169s Unpacking fonts-dejavu-mono (2.37-8) ...
169s Selecting previously unselected package fonts-dejavu-core.
169s Preparing to unpack .../02-fonts-dejavu-core_2.37-8_all.deb ...
169s Unpacking fonts-dejavu-core (2.37-8) ...
169s Selecting previously unselected package fontconfig-config.
169s Preparing to unpack .../03-fontconfig-config_2.15.0-2ubuntu1_s390x.deb ...
169s Unpacking fontconfig-config (2.15.0-2ubuntu1) ...
169s Selecting previously unselected package libfontconfig1:s390x.
169s Preparing to unpack .../04-libfontconfig1_2.15.0-2ubuntu1_s390x.deb ...
169s Unpacking libfontconfig1:s390x (2.15.0-2ubuntu1) ...
169s Selecting previously unselected package fontconfig.
169s Preparing to unpack .../05-fontconfig_2.15.0-2ubuntu1_s390x.deb ...
169s Unpacking fontconfig (2.15.0-2ubuntu1) ...
169s Selecting previously unselected package libasan8:s390x.
169s Preparing to unpack .../06-libasan8_15-20250222-0ubuntu1_s390x.deb ...
169s Unpacking libasan8:s390x (15-20250222-0ubuntu1) ...
169s Selecting previously unselected package libblas3:s390x.
169s Preparing to unpack .../07-libblas3_3.12.1-2_s390x.deb ...
169s Unpacking libblas3:s390x (3.12.1-2) ...
169s Selecting previously unselected package libgomp1:s390x.
169s Preparing to unpack .../08-libgomp1_15-20250222-0ubuntu1_s390x.deb ...
169s Unpacking libgomp1:s390x (15-20250222-0ubuntu1) ...
169s Selecting previously unselected package libitm1:s390x.
169s Preparing to unpack .../09-libitm1_15-20250222-0ubuntu1_s390x.deb ...
169s Unpacking libitm1:s390x (15-20250222-0ubuntu1) ...
169s Selecting previously unselected package libubsan1:s390x.
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169s Unpacking libubsan1:s390x (15-20250222-0ubuntu1) ...
169s Selecting previously unselected package libgcc-14-dev:s390x.
169s Preparing to unpack .../11-libgcc-14-dev_14.2.0-17ubuntu3_s390x.deb ...
169s Unpacking libgcc-14-dev:s390x (14.2.0-17ubuntu3) ...
169s Selecting previously unselected package libstdc++-14-dev:s390x.
169s Preparing to unpack .../12-libstdc++-14-dev_14.2.0-17ubuntu3_s390x.deb ...
169s Unpacking libstdc++-14-dev:s390x (14.2.0-17ubuntu3) ...
169s Selecting previously unselected package libboost1.83-dev:s390x.
169s Preparing to unpack .../13-libboost1.83-dev_1.83.0-4.1ubuntu2_s390x.deb ...
169s Unpacking libboost1.83-dev:s390x (1.83.0-4.1ubuntu2) ...
170s Selecting previously unselected package libboost-dev:s390x.
170s Preparing to unpack .../14-libboost-dev_1.83.0.2ubuntu1_s390x.deb ...
170s Unpacking libboost-dev:s390x (1.83.0.2ubuntu1) ...
170s Selecting previously unselected package libpixman-1-0:s390x.
170s Preparing to unpack .../15-libpixman-1-0_0.44.0-3_s390x.deb ...
170s Unpacking libpixman-1-0:s390x (0.44.0-3) ...
170s Selecting previously unselected package libxcb-render0:s390x.
170s Preparing to unpack .../16-libxcb-render0_1.17.0-2_s390x.deb ...
170s Unpacking libxcb-render0:s390x (1.17.0-2) ...
170s Selecting previously unselected package libxcb-shm0:s390x.
170s Preparing to unpack .../17-libxcb-shm0_1.17.0-2_s390x.deb ...
170s Unpacking libxcb-shm0:s390x (1.17.0-2) ...
170s Selecting previously unselected package libxrender1:s390x.
170s Preparing to unpack .../18-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ...
170s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ...
170s Selecting previously unselected package libcairo2:s390x.
170s Preparing to unpack .../19-libcairo2_1.18.2-2_s390x.deb ...
170s Unpacking libcairo2:s390x (1.18.2-2) ...
170s Selecting previously unselected package libdatrie1:s390x.
170s Preparing to unpack .../20-libdatrie1_0.2.13-3build1_s390x.deb ...
170s Unpacking libdatrie1:s390x (0.2.13-3build1) ...
170s Selecting previously unselected package libdeflate0:s390x.
170s Preparing to unpack .../21-libdeflate0_1.23-1_s390x.deb ...
170s Unpacking libdeflate0:s390x (1.23-1) ...
170s Selecting previously unselected package libgfortran5:s390x.
170s Preparing to unpack .../22-libgfortran5_15-20250222-0ubuntu1_s390x.deb ...
170s Unpacking libgfortran5:s390x (15-20250222-0ubuntu1) ...
170s Selecting previously unselected package libgraphite2-3:s390x.
170s Preparing to unpack .../23-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ...
170s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
170s Selecting previously unselected package libharfbuzz0b:s390x.
170s Preparing to unpack .../24-libharfbuzz0b_10.2.0-1_s390x.deb ...
170s Unpacking libharfbuzz0b:s390x (10.2.0-1) ...
170s Selecting previously unselected package x11-common.
170s Preparing to unpack .../25-x11-common_1%3a7.7+23ubuntu3_all.deb ...
170s Unpacking x11-common (1:7.7+23ubuntu3) ...
170s Selecting previously unselected package libice6:s390x.
170s Preparing to unpack .../26-libice6_2%3a1.1.1-1_s390x.deb ...
170s Unpacking libice6:s390x (2:1.1.1-1) ...
170s Selecting previously unselected package libjpeg-turbo8:s390x.
170s Preparing to unpack .../27-libjpeg-turbo8_2.1.5-3ubuntu2_s390x.deb ...
170s Unpacking libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ...
170s Selecting previously unselected package libjpeg8:s390x.
170s Preparing to unpack .../28-libjpeg8_8c-2ubuntu11_s390x.deb ...
170s Unpacking libjpeg8:s390x (8c-2ubuntu11) ...
170s Selecting previously unselected package liblapack3:s390x.
170s Preparing to unpack .../29-liblapack3_3.12.1-2_s390x.deb ...
170s Unpacking liblapack3:s390x (3.12.1-2) ...
170s Selecting previously unselected package libthai-data.
170s Preparing to unpack .../30-libthai-data_0.1.29-2build1_all.deb ...
170s Unpacking libthai-data (0.1.29-2build1) ...
170s Selecting previously unselected package libthai0:s390x.
170s Preparing to unpack .../31-libthai0_0.1.29-2build1_s390x.deb ...
170s Unpacking libthai0:s390x (0.1.29-2build1) ...
170s Selecting previously unselected package libpango-1.0-0:s390x.
170s Preparing to unpack .../32-libpango-1.0-0_1.56.2-1_s390x.deb ...
170s Unpacking libpango-1.0-0:s390x (1.56.2-1) ...
170s Selecting previously unselected package libpangoft2-1.0-0:s390x.
170s Preparing to unpack .../33-libpangoft2-1.0-0_1.56.2-1_s390x.deb ...
170s Unpacking libpangoft2-1.0-0:s390x (1.56.2-1) ...
170s Selecting previously unselected package libpangocairo-1.0-0:s390x.
170s Preparing to unpack .../34-libpangocairo-1.0-0_1.56.2-1_s390x.deb ...
170s Unpacking libpangocairo-1.0-0:s390x (1.56.2-1) ...
170s Selecting previously unselected package libpaper2:s390x.
170s Preparing to unpack .../35-libpaper2_2.2.5-0.3_s390x.deb ...
170s Unpacking libpaper2:s390x (2.2.5-0.3) ...
170s Selecting previously unselected package libpaper-utils.
170s Preparing to unpack .../36-libpaper-utils_2.2.5-0.3_s390x.deb ...
170s Unpacking libpaper-utils (2.2.5-0.3) ...
170s Selecting previously unselected package libsharpyuv0:s390x.
170s Preparing to unpack .../37-libsharpyuv0_1.5.0-0.1_s390x.deb ...
170s Unpacking libsharpyuv0:s390x (1.5.0-0.1) ...
170s Selecting previously unselected package libsm6:s390x.
170s Preparing to unpack .../38-libsm6_2%3a1.2.4-1_s390x.deb ...
170s Unpacking libsm6:s390x (2:1.2.4-1) ...
170s Selecting previously unselected package libtcl8.6:s390x.
170s Preparing to unpack .../39-libtcl8.6_8.6.16+dfsg-1_s390x.deb ...
170s Unpacking libtcl8.6:s390x (8.6.16+dfsg-1) ...
170s Selecting previously unselected package libjbig0:s390x.
170s Preparing to unpack .../40-libjbig0_2.1-6.1ubuntu2_s390x.deb ...
170s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ...
170s Selecting previously unselected package libwebp7:s390x.
170s Preparing to unpack .../41-libwebp7_1.5.0-0.1_s390x.deb ...
170s Unpacking libwebp7:s390x (1.5.0-0.1) ...
170s Selecting previously unselected package libtiff6:s390x.
170s Preparing to unpack .../42-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ...
170s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ...
170s Selecting previously unselected package libxft2:s390x.
170s Preparing to unpack .../43-libxft2_2.3.6-1build1_s390x.deb ...
170s Unpacking libxft2:s390x (2.3.6-1build1) ...
170s Selecting previously unselected package libxss1:s390x.
170s Preparing to unpack .../44-libxss1_1%3a1.2.3-1build3_s390x.deb ...
170s Unpacking libxss1:s390x (1:1.2.3-1build3) ...
170s Selecting previously unselected package libtk8.6:s390x.
170s Preparing to unpack .../45-libtk8.6_8.6.16-1_s390x.deb ...
170s Unpacking libtk8.6:s390x (8.6.16-1) ...
170s Selecting previously unselected package libxt6t64:s390x.
170s Preparing to unpack .../46-libxt6t64_1%3a1.2.1-1.2build1_s390x.deb ...
170s Unpacking libxt6t64:s390x (1:1.2.1-1.2build1) ...
170s Selecting previously unselected package zip.
170s Preparing to unpack .../47-zip_3.0-14ubuntu2_s390x.deb ...
170s Unpacking zip (3.0-14ubuntu2) ...
171s Selecting previously unselected package unzip.
171s Preparing to unpack .../48-unzip_6.0-28ubuntu6_s390x.deb ...
171s Unpacking unzip (6.0-28ubuntu6) ...
171s Selecting previously unselected package xdg-utils.
171s Preparing to unpack .../49-xdg-utils_1.2.1-2ubuntu1_all.deb ...
171s Unpacking xdg-utils (1.2.1-2ubuntu1) ...
171s Selecting previously unselected package r-base-core.
171s Preparing to unpack .../50-r-base-core_4.4.3-1_s390x.deb ...
171s Unpacking r-base-core (4.4.3-1) ...
171s Selecting previously unselected package r-cran-littler.
171s Preparing to unpack .../51-r-cran-littler_0.3.20-2_s390x.deb ...
171s Unpacking r-cran-littler (0.3.20-2) ...
171s Selecting previously unselected package littler.
171s Preparing to unpack .../52-littler_0.3.20-2_all.deb ...
171s Unpacking littler (0.3.20-2) ...
171s Selecting previously unselected package r-cran-bh.
171s Preparing to unpack .../53-r-cran-bh_1.84.0-1_all.deb ...
171s Unpacking r-cran-bh (1.84.0-1) ...
171s Selecting previously unselected package r-cran-pkgkitten.
171s Preparing to unpack .../54-r-cran-pkgkitten_0.2.4-1_all.deb ...
171s Unpacking r-cran-pkgkitten (0.2.4-1) ...
171s Selecting previously unselected package r-cran-rcpp.
171s Preparing to unpack .../55-r-cran-rcpp_1.0.14-1_s390x.deb ...
171s Unpacking r-cran-rcpp (1.0.14-1) ...
171s Selecting previously unselected package r-cran-rcpparmadillo.
171s Preparing to unpack .../56-r-cran-rcpparmadillo_14.2.3-1-1_s390x.deb ...
171s Unpacking r-cran-rcpparmadillo (14.2.3-1-1) ...
171s Selecting previously unselected package r-cran-rcppmlpack.
171s Preparing to unpack .../57-r-cran-rcppmlpack_1.0.10-7-2_s390x.deb ...
171s Unpacking r-cran-rcppmlpack (1.0.10-7-2) ...
171s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
171s Setting up libpixman-1-0:s390x (0.44.0-3) ...
171s Setting up libsharpyuv0:s390x (1.5.0-0.1) ...
171s Setting up libxrender1:s390x (1:0.9.10-1.1build1) ...
171s Setting up libdatrie1:s390x (0.2.13-3build1) ...
171s Setting up libxcb-render0:s390x (1.17.0-2) ...
171s Setting up unzip (6.0-28ubuntu6) ...
171s Setting up x11-common (1:7.7+23ubuntu3) ...
171s Setting up libdeflate0:s390x (1.23-1) ...
171s Setting up libxcb-shm0:s390x (1.17.0-2) ...
171s Setting up libgomp1:s390x (15-20250222-0ubuntu1) ...
171s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ...
171s Setting up zip (3.0-14ubuntu2) ...
171s Setting up libblas3:s390x (3.12.1-2) ...
171s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
171s Setting up libfreetype6:s390x (2.13.3+dfsg-1) ...
171s Setting up fonts-dejavu-mono (2.37-8) ...
171s Setting up libtcl8.6:s390x (8.6.16+dfsg-1) ...
171s Setting up fonts-dejavu-core (2.37-8) ...
171s Setting up libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ...
171s Setting up libgfortran5:s390x (15-20250222-0ubuntu1) ...
171s Setting up libwebp7:s390x (1.5.0-0.1) ...
171s Setting up libubsan1:s390x (15-20250222-0ubuntu1) ...
171s Setting up libasan8:s390x (15-20250222-0ubuntu1) ...
171s Setting up libharfbuzz0b:s390x (10.2.0-1) ...
171s Setting up libthai-data (0.1.29-2build1) ...
171s Setting up libxss1:s390x (1:1.2.3-1build3) ...
171s Setting up libpaper2:s390x (2.2.5-0.3) ...
171s Setting up xdg-utils (1.2.1-2ubuntu1) ...
171s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
171s Setting up libitm1:s390x (15-20250222-0ubuntu1) ...
171s Setting up libjpeg8:s390x (8c-2ubuntu11) ...
171s Setting up libice6:s390x (2:1.1.1-1) ...
171s Setting up liblapack3:s390x (3.12.1-2) ...
171s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
171s Setting up fontconfig-config (2.15.0-2ubuntu1) ...
171s Setting up libpaper-utils (2.2.5-0.3) ...
171s Setting up libthai0:s390x (0.1.29-2build1) ...
171s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu4) ...
171s Setting up libfontconfig1:s390x (2.15.0-2ubuntu1) ...
171s Setting up libgcc-14-dev:s390x (14.2.0-17ubuntu3) ...
171s Setting up libstdc++-14-dev:s390x (14.2.0-17ubuntu3) ...
171s Setting up libsm6:s390x (2:1.2.4-1) ...
171s Setting up fontconfig (2.15.0-2ubuntu1) ...
173s Regenerating fonts cache... done.
173s Setting up libxft2:s390x (2.3.6-1build1) ...
173s Setting up libboost1.83-dev:s390x (1.83.0-4.1ubuntu2) ...
174s Setting up libtk8.6:s390x (8.6.16-1) ...
174s Setting up libpango-1.0-0:s390x (1.56.2-1) ...
174s Setting up libcairo2:s390x (1.18.2-2) ...
174s Setting up libxt6t64:s390x (1:1.2.1-1.2build1) ...
174s Setting up libboost-dev:s390x (1.83.0.2ubuntu1) ...
174s Setting up libpangoft2-1.0-0:s390x (1.56.2-1) ...
174s Setting up libpangocairo-1.0-0:s390x (1.56.2-1) ...
174s Setting up r-base-core (4.4.3-1) ...
174s Creating config file /etc/R/Renviron with new version
174s Setting up r-cran-pkgkitten (0.2.4-1) ...
174s Setting up r-cran-littler (0.3.20-2) ...
174s Setting up r-cran-bh (1.84.0-1) ...
174s Setting up r-cran-rcpp (1.0.14-1) ...
174s Setting up littler (0.3.20-2) ...
174s Setting up r-cran-rcpparmadillo (14.2.3-1-1) ...
174s Setting up r-cran-rcppmlpack (1.0.10-7-2) ...
174s Processing triggers for libc-bin (2.41-1ubuntu2) ...
174s Processing triggers for man-db (2.13.0-1) ...
174s Processing triggers for install-info (7.1.1-1) ...
176s autopkgtest [18:25:03]: test vignette: [-----------------------
176s BEGIN VIGNETTE vignettes/RcppMLPACK-intro.Rnw
176s Output file:  RcppMLPACK-intro.tex
177s autopkgtest [18:25:04]: test vignette: -----------------------]
177s vignette             PASS
177s autopkgtest [18:25:04]: test vignette:  - - - - - - - - - - results - - - - - - - - - -
178s autopkgtest [18:25:05]: test pkg-r-autopkgtest: preparing testbed
178s Reading package lists...
178s Building dependency tree...
178s Reading state information...
178s Starting pkgProblemResolver with broken count: 0
178s Starting 2 pkgProblemResolver with broken count: 0
178s Done
178s The following NEW packages will be installed:
178s   build-essential cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu
178s   dctrl-tools g++ g++-14 g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14
178s   gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-14
178s   gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools
178s   libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgfortran-14-dev libicu-dev
178s   libisl23 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev liblapack-dev
178s   liblzma-dev libmpc3 libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev
178s   libpcre2-posix3 libpkgconf3 libpng-dev libreadline-dev libtirpc-dev
178s   pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev zlib1g-dev
178s 0 upgraded, 46 newly installed, 0 to remove and 0 not upgraded.
178s Need to get 74.5 MB of archives.
178s After this operation, 234 MB of additional disk space will be used.
178s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libisl23 s390x 0.27-1 [704 kB]
179s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB]
179s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [9572 kB]
180s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14 s390x 14.2.0-17ubuntu3 [1028 B]
180s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [5556 B]
180s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x cpp s390x 4:14.2.0-1ubuntu1 [22.4 kB]
180s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libcc1-0 s390x 15-20250222-0ubuntu1 [49.2 kB]
180s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [18.7 MB]
183s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14 s390x 14.2.0-17ubuntu3 [526 kB]
184s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1204 B]
184s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x gcc s390x 4:14.2.0-1ubuntu1 [5004 B]
184s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [11.0 MB]
186s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14 s390x 14.2.0-17ubuntu3 [21.8 kB]
186s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x g++-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [956 B]
186s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x g++ s390x 4:14.2.0-1ubuntu1 [1080 B]
186s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x build-essential s390x 12.10ubuntu1 [4930 B]
186s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x dctrl-tools s390x 2.24-3build3 [106 kB]
186s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran-14-dev s390x 14.2.0-17ubuntu3 [654 kB]
186s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [10.3 MB]
188s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14 s390x 14.2.0-17ubuntu3 [13.6 kB]
188s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1012 B]
188s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran s390x 4:14.2.0-1ubuntu1 [1160 B]
188s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x icu-devtools s390x 76.1-1ubuntu2 [225 kB]
188s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libblas-dev s390x 3.12.1-2 [254 kB]
188s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x libbz2-dev s390x 1.0.8-6 [39.1 kB]
188s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate-dev s390x 1.23-1 [52.2 kB]
188s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x libicu-dev s390x 76.1-1ubuntu2 [12.2 MB]
189s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8-dev s390x 2.1.5-3ubuntu2 [281 kB]
190s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B]
190s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B]
190s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack-dev s390x 3.12.1-2 [5967 kB]
190s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libncurses-dev s390x 6.5+20250216-2 [407 kB]
190s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-16-0 s390x 10.45-1 [259 kB]
190s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-32-0 s390x 10.45-1 [245 kB]
190s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-posix3 s390x 10.45-1 [7080 B]
190s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-dev s390x 10.45-1 [899 kB]
191s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libpkgconf3 s390x 1.8.1-4 [31.2 kB]
191s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB]
191s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libpng-dev s390x 1.6.47-1 [278 kB]
191s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libreadline-dev s390x 8.2-6 [187 kB]
191s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x liblzma-dev s390x 5.6.4-1 [183 kB]
191s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf-bin s390x 1.8.1-4 [21.5 kB]
191s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf s390x 1.8.1-4 [16.7 kB]
191s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x libtirpc-dev s390x 1.3.4+ds-1.3 [196 kB]
191s Get:45 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-dev all 4.4.3-1 [4176 B]
191s Get:46 http://ftpmaster.internal/ubuntu plucky/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
191s Fetched 74.5 MB in 13s (5915 kB/s)
191s Selecting previously unselected package libisl23:s390x.
191s (Reading database ... 
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191s Preparing to unpack .../00-libisl23_0.27-1_s390x.deb ...
191s Unpacking libisl23:s390x (0.27-1) ...
191s Selecting previously unselected package libmpc3:s390x.
191s Preparing to unpack .../01-libmpc3_1.3.1-1build2_s390x.deb ...
191s Unpacking libmpc3:s390x (1.3.1-1build2) ...
191s Selecting previously unselected package cpp-14-s390x-linux-gnu.
191s Preparing to unpack .../02-cpp-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
191s Unpacking cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
191s Selecting previously unselected package cpp-14.
191s Preparing to unpack .../03-cpp-14_14.2.0-17ubuntu3_s390x.deb ...
191s Unpacking cpp-14 (14.2.0-17ubuntu3) ...
191s Selecting previously unselected package cpp-s390x-linux-gnu.
191s Preparing to unpack .../04-cpp-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
191s Unpacking cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
191s Selecting previously unselected package cpp.
191s Preparing to unpack .../05-cpp_4%3a14.2.0-1ubuntu1_s390x.deb ...
191s Unpacking cpp (4:14.2.0-1ubuntu1) ...
191s Selecting previously unselected package libcc1-0:s390x.
191s Preparing to unpack .../06-libcc1-0_15-20250222-0ubuntu1_s390x.deb ...
191s Unpacking libcc1-0:s390x (15-20250222-0ubuntu1) ...
191s Selecting previously unselected package gcc-14-s390x-linux-gnu.
191s Preparing to unpack .../07-gcc-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
191s Unpacking gcc-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
192s Selecting previously unselected package gcc-14.
192s Preparing to unpack .../08-gcc-14_14.2.0-17ubuntu3_s390x.deb ...
192s Unpacking gcc-14 (14.2.0-17ubuntu3) ...
192s Selecting previously unselected package gcc-s390x-linux-gnu.
192s Preparing to unpack .../09-gcc-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
192s Unpacking gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
192s Selecting previously unselected package gcc.
192s Preparing to unpack .../10-gcc_4%3a14.2.0-1ubuntu1_s390x.deb ...
192s Unpacking gcc (4:14.2.0-1ubuntu1) ...
192s Selecting previously unselected package g++-14-s390x-linux-gnu.
192s Preparing to unpack .../11-g++-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
192s Unpacking g++-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
192s Selecting previously unselected package g++-14.
192s Preparing to unpack .../12-g++-14_14.2.0-17ubuntu3_s390x.deb ...
192s Unpacking g++-14 (14.2.0-17ubuntu3) ...
192s Selecting previously unselected package g++-s390x-linux-gnu.
192s Preparing to unpack .../13-g++-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
192s Unpacking g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
192s Selecting previously unselected package g++.
192s Preparing to unpack .../14-g++_4%3a14.2.0-1ubuntu1_s390x.deb ...
192s Unpacking g++ (4:14.2.0-1ubuntu1) ...
192s Selecting previously unselected package build-essential.
192s Preparing to unpack .../15-build-essential_12.10ubuntu1_s390x.deb ...
192s Unpacking build-essential (12.10ubuntu1) ...
192s Selecting previously unselected package dctrl-tools.
192s Preparing to unpack .../16-dctrl-tools_2.24-3build3_s390x.deb ...
192s Unpacking dctrl-tools (2.24-3build3) ...
192s Selecting previously unselected package libgfortran-14-dev:s390x.
192s Preparing to unpack .../17-libgfortran-14-dev_14.2.0-17ubuntu3_s390x.deb ...
192s Unpacking libgfortran-14-dev:s390x (14.2.0-17ubuntu3) ...
192s Selecting previously unselected package gfortran-14-s390x-linux-gnu.
192s Preparing to unpack .../18-gfortran-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
192s Unpacking gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
192s Selecting previously unselected package gfortran-14.
192s Preparing to unpack .../19-gfortran-14_14.2.0-17ubuntu3_s390x.deb ...
192s Unpacking gfortran-14 (14.2.0-17ubuntu3) ...
192s Selecting previously unselected package gfortran-s390x-linux-gnu.
192s Preparing to unpack .../20-gfortran-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
192s Unpacking gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
192s Selecting previously unselected package gfortran.
192s Preparing to unpack .../21-gfortran_4%3a14.2.0-1ubuntu1_s390x.deb ...
192s Unpacking gfortran (4:14.2.0-1ubuntu1) ...
192s Selecting previously unselected package icu-devtools.
192s Preparing to unpack .../22-icu-devtools_76.1-1ubuntu2_s390x.deb ...
192s Unpacking icu-devtools (76.1-1ubuntu2) ...
192s Selecting previously unselected package libblas-dev:s390x.
192s Preparing to unpack .../23-libblas-dev_3.12.1-2_s390x.deb ...
192s Unpacking libblas-dev:s390x (3.12.1-2) ...
192s Selecting previously unselected package libbz2-dev:s390x.
192s Preparing to unpack .../24-libbz2-dev_1.0.8-6_s390x.deb ...
192s Unpacking libbz2-dev:s390x (1.0.8-6) ...
192s Selecting previously unselected package libdeflate-dev:s390x.
192s Preparing to unpack .../25-libdeflate-dev_1.23-1_s390x.deb ...
192s Unpacking libdeflate-dev:s390x (1.23-1) ...
192s Selecting previously unselected package libicu-dev:s390x.
192s Preparing to unpack .../26-libicu-dev_76.1-1ubuntu2_s390x.deb ...
192s Unpacking libicu-dev:s390x (76.1-1ubuntu2) ...
192s Selecting previously unselected package libjpeg-turbo8-dev:s390x.
192s Preparing to unpack .../27-libjpeg-turbo8-dev_2.1.5-3ubuntu2_s390x.deb ...
192s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ...
192s Selecting previously unselected package libjpeg8-dev:s390x.
192s Preparing to unpack .../28-libjpeg8-dev_8c-2ubuntu11_s390x.deb ...
192s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ...
192s Selecting previously unselected package libjpeg-dev:s390x.
192s Preparing to unpack .../29-libjpeg-dev_8c-2ubuntu11_s390x.deb ...
192s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ...
192s Selecting previously unselected package liblapack-dev:s390x.
192s Preparing to unpack .../30-liblapack-dev_3.12.1-2_s390x.deb ...
192s Unpacking liblapack-dev:s390x (3.12.1-2) ...
192s Selecting previously unselected package libncurses-dev:s390x.
192s Preparing to unpack .../31-libncurses-dev_6.5+20250216-2_s390x.deb ...
192s Unpacking libncurses-dev:s390x (6.5+20250216-2) ...
192s Selecting previously unselected package libpcre2-16-0:s390x.
192s Preparing to unpack .../32-libpcre2-16-0_10.45-1_s390x.deb ...
192s Unpacking libpcre2-16-0:s390x (10.45-1) ...
192s Selecting previously unselected package libpcre2-32-0:s390x.
192s Preparing to unpack .../33-libpcre2-32-0_10.45-1_s390x.deb ...
192s Unpacking libpcre2-32-0:s390x (10.45-1) ...
192s Selecting previously unselected package libpcre2-posix3:s390x.
193s Preparing to unpack .../34-libpcre2-posix3_10.45-1_s390x.deb ...
193s Unpacking libpcre2-posix3:s390x (10.45-1) ...
193s Selecting previously unselected package libpcre2-dev:s390x.
193s Preparing to unpack .../35-libpcre2-dev_10.45-1_s390x.deb ...
193s Unpacking libpcre2-dev:s390x (10.45-1) ...
193s Selecting previously unselected package libpkgconf3:s390x.
193s Preparing to unpack .../36-libpkgconf3_1.8.1-4_s390x.deb ...
193s Unpacking libpkgconf3:s390x (1.8.1-4) ...
193s Selecting previously unselected package zlib1g-dev:s390x.
193s Preparing to unpack .../37-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_s390x.deb ...
193s Unpacking zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
193s Selecting previously unselected package libpng-dev:s390x.
193s Preparing to unpack .../38-libpng-dev_1.6.47-1_s390x.deb ...
193s Unpacking libpng-dev:s390x (1.6.47-1) ...
193s Selecting previously unselected package libreadline-dev:s390x.
193s Preparing to unpack .../39-libreadline-dev_8.2-6_s390x.deb ...
193s Unpacking libreadline-dev:s390x (8.2-6) ...
193s Selecting previously unselected package liblzma-dev:s390x.
193s Preparing to unpack .../40-liblzma-dev_5.6.4-1_s390x.deb ...
193s Unpacking liblzma-dev:s390x (5.6.4-1) ...
193s Selecting previously unselected package pkgconf-bin.
193s Preparing to unpack .../41-pkgconf-bin_1.8.1-4_s390x.deb ...
193s Unpacking pkgconf-bin (1.8.1-4) ...
193s Selecting previously unselected package pkgconf:s390x.
193s Preparing to unpack .../42-pkgconf_1.8.1-4_s390x.deb ...
193s Unpacking pkgconf:s390x (1.8.1-4) ...
193s Selecting previously unselected package libtirpc-dev:s390x.
193s Preparing to unpack .../43-libtirpc-dev_1.3.4+ds-1.3_s390x.deb ...
193s Unpacking libtirpc-dev:s390x (1.3.4+ds-1.3) ...
193s Selecting previously unselected package r-base-dev.
193s Preparing to unpack .../44-r-base-dev_4.4.3-1_all.deb ...
193s Unpacking r-base-dev (4.4.3-1) ...
193s Selecting previously unselected package pkg-r-autopkgtest.
193s Preparing to unpack .../45-pkg-r-autopkgtest_20231212ubuntu1_all.deb ...
193s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ...
193s Setting up libgfortran-14-dev:s390x (14.2.0-17ubuntu3) ...
193s Setting up libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ...
193s Setting up libncurses-dev:s390x (6.5+20250216-2) ...
193s Setting up libreadline-dev:s390x (8.2-6) ...
193s Setting up libpcre2-16-0:s390x (10.45-1) ...
193s Setting up libpcre2-32-0:s390x (10.45-1) ...
193s Setting up libtirpc-dev:s390x (1.3.4+ds-1.3) ...
193s Setting up libpkgconf3:s390x (1.8.1-4) ...
193s Setting up libmpc3:s390x (1.3.1-1build2) ...
193s Setting up icu-devtools (76.1-1ubuntu2) ...
193s Setting up pkgconf-bin (1.8.1-4) ...
193s Setting up liblzma-dev:s390x (5.6.4-1) ...
193s Setting up zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
193s Setting up libpcre2-posix3:s390x (10.45-1) ...
193s Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ...
193s Setting up libisl23:s390x (0.27-1) ...
193s Setting up libdeflate-dev:s390x (1.23-1) ...
193s Setting up libicu-dev:s390x (76.1-1ubuntu2) ...
193s Setting up libcc1-0:s390x (15-20250222-0ubuntu1) ...
193s Setting up libblas-dev:s390x (3.12.1-2) ...
193s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so to provide /usr/lib/s390x-linux-gnu/libblas.so (libblas.so-s390x-linux-gnu) in auto mode
193s Setting up dctrl-tools (2.24-3build3) ...
193s Setting up libbz2-dev:s390x (1.0.8-6) ...
193s Setting up libpcre2-dev:s390x (10.45-1) ...
193s Setting up libpng-dev:s390x (1.6.47-1) ...
193s Setting up libjpeg-dev:s390x (8c-2ubuntu11) ...
193s Setting up pkgconf:s390x (1.8.1-4) ...
193s Setting up liblapack-dev:s390x (3.12.1-2) ...
193s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode
193s Setting up cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
193s Setting up cpp-14 (14.2.0-17ubuntu3) ...
193s Setting up cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
193s Setting up gcc-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
193s Setting up gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
193s Setting up g++-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
193s Setting up cpp (4:14.2.0-1ubuntu1) ...
193s Setting up gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
193s Setting up g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
193s Setting up gcc-14 (14.2.0-17ubuntu3) ...
193s Setting up g++-14 (14.2.0-17ubuntu3) ...
193s Setting up gfortran-14 (14.2.0-17ubuntu3) ...
193s Setting up gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
193s Setting up gcc (4:14.2.0-1ubuntu1) ...
193s Setting up g++ (4:14.2.0-1ubuntu1) ...
193s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
193s Setting up build-essential (12.10ubuntu1) ...
193s Setting up gfortran (4:14.2.0-1ubuntu1) ...
193s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
193s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
193s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
193s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
193s Setting up r-base-dev (4.4.3-1) ...
193s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
193s Processing triggers for libc-bin (2.41-1ubuntu2) ...
193s Processing triggers for man-db (2.13.0-1) ...
194s Processing triggers for install-info (7.1.1-1) ...
195s autopkgtest [18:25:22]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
195s autopkgtest [18:25:22]: test pkg-r-autopkgtest: [-----------------------
195s Test: Try to load the R library RcppMLPACK
195s 
195s R version 4.4.3 (2025-02-28) -- "Trophy Case"
195s Copyright (C) 2025 The R Foundation for Statistical Computing
195s Platform: s390x-ibm-linux-gnu
195s 
195s R is free software and comes with ABSOLUTELY NO WARRANTY.
195s You are welcome to redistribute it under certain conditions.
195s Type 'license()' or 'licence()' for distribution details.
195s 
195s R is a collaborative project with many contributors.
195s Type 'contributors()' for more information and
195s 'citation()' on how to cite R or R packages in publications.
195s 
195s Type 'demo()' for some demos, 'help()' for on-line help, or
195s 'help.start()' for an HTML browser interface to help.
195s Type 'q()' to quit R.
195s 
195s > library('RcppMLPACK')
195s > 
195s > 
195s Other tests are currently unsupported!
195s They will be progressively added.
195s autopkgtest [18:25:22]: test pkg-r-autopkgtest: -----------------------]
196s autopkgtest [18:25:23]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
196s pkg-r-autopkgtest    PASS
196s autopkgtest [18:25:23]: @@@@@@@@@@@@@@@@@@@@ summary
196s vignette             PASS
196s pkg-r-autopkgtest    PASS
215s nova [W] Using flock in prodstack6-s390x
215s flock: timeout while waiting to get lock
215s Creating nova instance adt-plucky-s390x-r-cran-rcppmlpack-20250315-182207-juju-7f2275-prod-proposed-migration-environment-2-c9f67814-9269-4292-a553-e3c3d6af2242 from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)...
215s nova [W] Timed out waiting for 71febcf0-8069-44fc-a432-a72b5d01fbf1 to get deleted.