0s autopkgtest [05:32:09]: starting date and time: 2025-02-04 05:32:09+0000
  0s autopkgtest [05:32:09]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  0s autopkgtest [05:32:09]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.zndw50ip/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-testthat --apt-upgrade r-cran-rcpphnsw --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-testthat/3.2.3-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-s390x-24.secgroup --name adt-plucky-s390x-r-cran-rcpphnsw-20250204-052222-juju-7f2275-prod-proposed-migration-environment-20-a4bd6a60-b2b7-47bf-b4e8-ec18dd33f99e --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
270s autopkgtest [05:36:39]: testbed dpkg architecture: s390x
270s autopkgtest [05:36:39]: testbed apt version: 2.9.18
271s autopkgtest [05:36:40]: @@@@@@@@@@@@@@@@@@@@ test bed setup
271s autopkgtest [05:36:40]: testbed release detected to be: None
272s autopkgtest [05:36:41]: updating testbed package index (apt update)
272s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB]
273s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
273s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
273s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
273s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [81.7 kB]
273s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.8 kB]
273s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [906 kB]
275s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [113 kB]
275s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [798 kB]
276s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3348 B]
276s Fetched 2027 kB in 3s (587 kB/s)
276s Reading package lists...
277s Reading package lists...
277s Building dependency tree...
277s Reading state information...
277s Calculating upgrade...
277s The following packages were automatically installed and are no longer required:
277s   linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic
277s   linux-modules-6.11.0-8-generic linux-tools-6.11.0-8
277s   linux-tools-6.11.0-8-generic
277s Use 'sudo apt autoremove' to remove them.
277s The following packages will be upgraded:
277s   wireless-regdb
277s 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
277s Need to get 7214 B of archives.
277s After this operation, 0 B of additional disk space will be used.
277s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x wireless-regdb all 2024.10.07-0ubuntu1 [7214 B]
278s Fetched 7214 B in 0s (34.2 kB/s)
278s (Reading database ... 
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(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 80938 files and directories currently installed.)
278s Preparing to unpack .../wireless-regdb_2024.10.07-0ubuntu1_all.deb ...
278s Unpacking wireless-regdb (2024.10.07-0ubuntu1) over (2024.07.04-0ubuntu1) ...
278s Setting up wireless-regdb (2024.10.07-0ubuntu1) ...
278s Processing triggers for man-db (2.13.0-1) ...
278s Reading package lists...
278s Building dependency tree...
278s Reading state information...
278s The following packages will be REMOVED:
278s   linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
278s   linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8*
278s   linux-tools-6.11.0-8-generic*
279s 0 upgraded, 0 newly installed, 5 to remove and 0 not upgraded.
279s After this operation, 143 MB disk space will be freed.
279s (Reading database ... 
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(Reading database ... 20%
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(Reading database ... 40%
(Reading database ... 45%
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(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 80938 files and directories currently installed.)
279s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
279s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
279s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
280s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
280s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
280s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56531 files and directories currently installed.)
280s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
280s autopkgtest [05:36:49]: upgrading testbed (apt dist-upgrade and autopurge)
280s Reading package lists...
280s Building dependency tree...
280s Reading state information...
280s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
280s Starting 2 pkgProblemResolver with broken count: 0
280s Done
280s Entering ResolveByKeep
281s 
281s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
281s Reading package lists...
281s Building dependency tree...
281s Reading state information...
281s Starting pkgProblemResolver with broken count: 0
281s Starting 2 pkgProblemResolver with broken count: 0
281s Done
281s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
282s autopkgtest [05:36:51]: rebooting testbed after setup commands that affected boot
301s autopkgtest [05:37:10]: testbed running kernel: Linux 6.12.0-12-generic #12-Ubuntu SMP Wed Jan 22 15:18:24 UTC 2025
304s autopkgtest [05:37:13]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-rcpphnsw
306s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-rcpphnsw 0.5.0+ds-1 (dsc) [2178 B]
306s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-rcpphnsw 0.5.0+ds-1 (tar) [16.8 kB]
306s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-rcpphnsw 0.5.0+ds-1 (diff) [2900 B]
306s gpgv: Signature made Tue Oct 17 09:11:39 2023 UTC
306s gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
306s gpgv:                issuer "tille@debian.org"
306s gpgv: Can't check signature: No public key
306s dpkg-source: warning: cannot verify inline signature for ./r-cran-rcpphnsw_0.5.0+ds-1.dsc: no acceptable signature found
306s autopkgtest [05:37:15]: testing package r-cran-rcpphnsw version 0.5.0+ds-1
306s autopkgtest [05:37:15]: build not needed
307s autopkgtest [05:37:16]: test run-unit-test: preparing testbed
308s Reading package lists...
308s Building dependency tree...
308s Reading state information...
308s Starting pkgProblemResolver with broken count: 0
308s Starting 2 pkgProblemResolver with broken count: 0
308s Done
308s The following NEW packages will be installed:
308s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
308s   fonts-glyphicons-halflings libblas3 libcairo2 libdatrie1 libdeflate0
308s   libfontconfig1 libfreetype6 libgfortran5 libgomp1 libgraphite2-3
308s   libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap
308s   liblapack3 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
308s   libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6
308s   libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0
308s   libxft2 libxrender1 libxss1 libxt6t64 littler node-html5shiv r-base-core
308s   r-cran-askpass r-cran-brio r-cran-callr r-cran-cli r-cran-covr r-cran-crayon
308s   r-cran-curl r-cran-desc r-cran-diffobj r-cran-digest r-cran-evaluate
308s   r-cran-fs r-cran-glue r-cran-httr r-cran-jsonlite r-cran-lazyeval
308s   r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mime r-cran-openssl
308s   r-cran-pkgbuild r-cran-pkgkitten r-cran-pkgload r-cran-praise
308s   r-cran-processx r-cran-ps r-cran-r6 r-cran-rcpp r-cran-rcpphnsw r-cran-rex
308s   r-cran-rlang r-cran-rprojroot r-cran-sys r-cran-testthat r-cran-waldo
308s   r-cran-withr r-cran-yaml unzip x11-common xdg-utils zip
308s 0 upgraded, 86 newly installed, 0 to remove and 0 not upgraded.
308s Need to get 54.5 MB of archives.
308s After this operation, 113 MB of additional disk space will be used.
308s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB]
309s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB]
309s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB]
310s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-1.1ubuntu2 [37.4 kB]
310s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-1.1ubuntu2 [150 kB]
310s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig s390x 2.15.0-1.1ubuntu2 [191 kB]
310s Get:7 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
310s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.0-4 [238 kB]
310s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB]
310s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB]
310s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B]
310s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB]
310s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB]
310s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB]
310s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.23-1 [46.1 kB]
310s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 14.2.0-13ubuntu1 [588 kB]
311s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 14.2.0-13ubuntu1 [151 kB]
311s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB]
311s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB]
311s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB]
311s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB]
311s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB]
311s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B]
311s Get:24 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
311s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.0-4 [2964 kB]
311s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x libthai-data all 0.1.29-2build1 [158 kB]
311s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB]
311s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x libpango-1.0-0 s390x 1.56.1-1 [253 kB]
311s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x libpangoft2-1.0-0 s390x 1.56.1-1 [50.3 kB]
311s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libpangocairo-1.0-0 s390x 1.56.1-1 [28.3 kB]
311s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB]
311s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB]
311s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB]
311s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libsm6 s390x 2:1.2.4-1 [18.4 kB]
311s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB]
312s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB]
312s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB]
312s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB]
312s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB]
312s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B]
312s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.16-1 [830 kB]
312s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB]
312s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x zip s390x 3.0-14ubuntu2 [187 kB]
312s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x unzip s390x 6.0-28ubuntu6 [186 kB]
312s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x xdg-utils all 1.2.1-0ubuntu1 [67.5 kB]
312s Get:46 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-core s390x 4.4.2-1build1 [28.6 MB]
315s Get:47 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-littler s390x 0.3.20-2 [95.0 kB]
315s Get:48 http://ftpmaster.internal/ubuntu plucky/universe s390x littler all 0.3.20-2 [2554 B]
315s Get:49 http://ftpmaster.internal/ubuntu plucky/universe s390x node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
315s Get:50 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sys s390x 3.4.3-1 [45.2 kB]
315s Get:51 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-askpass s390x 1.2.1-1 [24.8 kB]
315s Get:52 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-brio s390x 1.1.5-1 [38.6 kB]
315s Get:53 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ps s390x 1.8.1-1 [395 kB]
315s Get:54 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r6 all 2.5.1-1 [99.0 kB]
315s Get:55 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-processx s390x 3.8.5-1 [354 kB]
315s Get:56 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-callr all 3.7.6-1 [458 kB]
315s Get:57 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cli s390x 3.6.3-1 [1349 kB]
315s Get:58 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-digest s390x 0.6.37-1 [205 kB]
315s Get:59 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-jsonlite s390x 1.8.9+dfsg-1 [447 kB]
315s Get:60 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lazyeval s390x 0.2.2-1build1 [143 kB]
315s Get:61 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rex all 1.2.1-1 [129 kB]
315s Get:62 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-curl s390x 6.1.0+dfsg-1 [195 kB]
315s Get:63 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mime s390x 0.12-2 [35.8 kB]
315s Get:64 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-openssl s390x 2.2.0+dfsg-1 [405 kB]
315s Get:65 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-httr all 1.4.7+dfsg-1 [459 kB]
315s Get:66 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-crayon all 1.5.3-1 [165 kB]
315s Get:67 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-withr all 3.0.2+dfsg-1 [214 kB]
315s Get:68 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-yaml s390x 2.3.10-1 [113 kB]
315s Get:69 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-covr s390x 3.6.4+dfsg-1 [302 kB]
315s Get:70 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-desc all 1.4.3-1 [359 kB]
315s Get:71 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-diffobj s390x 0.3.5-1 [1115 kB]
315s Get:72 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-evaluate all 1.0.3-1 [114 kB]
315s Get:73 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fs s390x 1.6.5+dfsg-1 [245 kB]
315s Get:74 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-glue s390x 1.8.0-1 [164 kB]
315s Get:75 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rlang s390x 1.1.5-1 [1713 kB]
315s Get:76 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
315s Get:77 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB]
315s Get:78 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgbuild all 1.4.6-1 [213 kB]
315s Get:79 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
315s Get:80 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rprojroot all 2.0.4-2 [125 kB]
315s Get:81 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgload all 1.4.0-1 [247 kB]
315s Get:82 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-praise all 1.0.0-4build1 [20.3 kB]
315s Get:83 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcpp s390x 1.0.14-1 [2003 kB]
316s Get:84 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcpphnsw s390x 0.5.0+ds-1 [180 kB]
316s Get:85 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-waldo all 0.6.1-1 [150 kB]
316s Get:86 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x r-cran-testthat s390x 3.2.3-1 [1641 kB]
316s Preconfiguring packages ...
316s Fetched 54.5 MB in 8s (7217 kB/s)
316s Selecting previously unselected package libfreetype6:s390x.
316s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56531 files and directories currently installed.)
316s Preparing to unpack .../00-libfreetype6_2.13.3+dfsg-1_s390x.deb ...
316s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ...
316s Selecting previously unselected package fonts-dejavu-mono.
316s Preparing to unpack .../01-fonts-dejavu-mono_2.37-8_all.deb ...
316s Unpacking fonts-dejavu-mono (2.37-8) ...
316s Selecting previously unselected package fonts-dejavu-core.
316s Preparing to unpack .../02-fonts-dejavu-core_2.37-8_all.deb ...
316s Unpacking fonts-dejavu-core (2.37-8) ...
316s Selecting previously unselected package fontconfig-config.
316s Preparing to unpack .../03-fontconfig-config_2.15.0-1.1ubuntu2_s390x.deb ...
316s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ...
316s Selecting previously unselected package libfontconfig1:s390x.
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316s Selecting previously unselected package fontconfig.
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316s Selecting previously unselected package fonts-glyphicons-halflings.
316s Preparing to unpack .../06-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ...
316s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
316s Selecting previously unselected package libblas3:s390x.
316s Preparing to unpack .../07-libblas3_3.12.0-4_s390x.deb ...
316s Unpacking libblas3:s390x (3.12.0-4) ...
316s Selecting previously unselected package libpixman-1-0:s390x.
316s Preparing to unpack .../08-libpixman-1-0_0.44.0-3_s390x.deb ...
316s Unpacking libpixman-1-0:s390x (0.44.0-3) ...
316s Selecting previously unselected package libxcb-render0:s390x.
316s Preparing to unpack .../09-libxcb-render0_1.17.0-2_s390x.deb ...
316s Unpacking libxcb-render0:s390x (1.17.0-2) ...
316s Selecting previously unselected package libxcb-shm0:s390x.
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316s Unpacking libxcb-shm0:s390x (1.17.0-2) ...
316s Selecting previously unselected package libxrender1:s390x.
316s Preparing to unpack .../11-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ...
316s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ...
316s Selecting previously unselected package libcairo2:s390x.
316s Preparing to unpack .../12-libcairo2_1.18.2-2_s390x.deb ...
316s Unpacking libcairo2:s390x (1.18.2-2) ...
316s Selecting previously unselected package libdatrie1:s390x.
316s Preparing to unpack .../13-libdatrie1_0.2.13-3build1_s390x.deb ...
316s Unpacking libdatrie1:s390x (0.2.13-3build1) ...
316s Selecting previously unselected package libdeflate0:s390x.
316s Preparing to unpack .../14-libdeflate0_1.23-1_s390x.deb ...
316s Unpacking libdeflate0:s390x (1.23-1) ...
316s Selecting previously unselected package libgfortran5:s390x.
316s Preparing to unpack .../15-libgfortran5_14.2.0-13ubuntu1_s390x.deb ...
316s Unpacking libgfortran5:s390x (14.2.0-13ubuntu1) ...
317s Selecting previously unselected package libgomp1:s390x.
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317s Unpacking libgomp1:s390x (14.2.0-13ubuntu1) ...
317s Selecting previously unselected package libgraphite2-3:s390x.
317s Preparing to unpack .../17-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ...
317s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
317s Selecting previously unselected package libharfbuzz0b:s390x.
317s Preparing to unpack .../18-libharfbuzz0b_10.2.0-1_s390x.deb ...
317s Unpacking libharfbuzz0b:s390x (10.2.0-1) ...
317s Selecting previously unselected package x11-common.
317s Preparing to unpack .../19-x11-common_1%3a7.7+23ubuntu3_all.deb ...
317s Unpacking x11-common (1:7.7+23ubuntu3) ...
317s Selecting previously unselected package libice6:s390x.
317s Preparing to unpack .../20-libice6_2%3a1.1.1-1_s390x.deb ...
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317s Selecting previously unselected package libjpeg-turbo8:s390x.
317s Preparing to unpack .../21-libjpeg-turbo8_2.1.5-3ubuntu2_s390x.deb ...
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317s Selecting previously unselected package libjpeg8:s390x.
317s Preparing to unpack .../22-libjpeg8_8c-2ubuntu11_s390x.deb ...
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317s Selecting previously unselected package libjs-bootstrap.
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317s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ...
317s Selecting previously unselected package liblapack3:s390x.
317s Preparing to unpack .../24-liblapack3_3.12.0-4_s390x.deb ...
317s Unpacking liblapack3:s390x (3.12.0-4) ...
317s Selecting previously unselected package libthai-data.
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317s Selecting previously unselected package libthai0:s390x.
317s Preparing to unpack .../26-libthai0_0.1.29-2build1_s390x.deb ...
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317s Selecting previously unselected package libpango-1.0-0:s390x.
317s Preparing to unpack .../27-libpango-1.0-0_1.56.1-1_s390x.deb ...
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317s Selecting previously unselected package libpangoft2-1.0-0:s390x.
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317s Unpacking libpangoft2-1.0-0:s390x (1.56.1-1) ...
317s Selecting previously unselected package libpangocairo-1.0-0:s390x.
317s Preparing to unpack .../29-libpangocairo-1.0-0_1.56.1-1_s390x.deb ...
317s Unpacking libpangocairo-1.0-0:s390x (1.56.1-1) ...
317s Selecting previously unselected package libpaper2:s390x.
317s Preparing to unpack .../30-libpaper2_2.2.5-0.3_s390x.deb ...
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317s Selecting previously unselected package libpaper-utils.
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317s Unpacking libpaper-utils (2.2.5-0.3) ...
317s Selecting previously unselected package libsharpyuv0:s390x.
317s Preparing to unpack .../32-libsharpyuv0_1.5.0-0.1_s390x.deb ...
317s Unpacking libsharpyuv0:s390x (1.5.0-0.1) ...
317s Selecting previously unselected package libsm6:s390x.
317s Preparing to unpack .../33-libsm6_2%3a1.2.4-1_s390x.deb ...
317s Unpacking libsm6:s390x (2:1.2.4-1) ...
317s Selecting previously unselected package libtcl8.6:s390x.
317s Preparing to unpack .../34-libtcl8.6_8.6.16+dfsg-1_s390x.deb ...
317s Unpacking libtcl8.6:s390x (8.6.16+dfsg-1) ...
317s Selecting previously unselected package libjbig0:s390x.
317s Preparing to unpack .../35-libjbig0_2.1-6.1ubuntu2_s390x.deb ...
317s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ...
317s Selecting previously unselected package libwebp7:s390x.
317s Preparing to unpack .../36-libwebp7_1.5.0-0.1_s390x.deb ...
317s Unpacking libwebp7:s390x (1.5.0-0.1) ...
317s Selecting previously unselected package libtiff6:s390x.
317s Preparing to unpack .../37-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ...
317s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ...
317s Selecting previously unselected package libxft2:s390x.
317s Preparing to unpack .../38-libxft2_2.3.6-1build1_s390x.deb ...
317s Unpacking libxft2:s390x (2.3.6-1build1) ...
317s Selecting previously unselected package libxss1:s390x.
317s Preparing to unpack .../39-libxss1_1%3a1.2.3-1build3_s390x.deb ...
317s Unpacking libxss1:s390x (1:1.2.3-1build3) ...
317s Selecting previously unselected package libtk8.6:s390x.
317s Preparing to unpack .../40-libtk8.6_8.6.16-1_s390x.deb ...
317s Unpacking libtk8.6:s390x (8.6.16-1) ...
317s Selecting previously unselected package libxt6t64:s390x.
317s Preparing to unpack .../41-libxt6t64_1%3a1.2.1-1.2build1_s390x.deb ...
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317s Selecting previously unselected package zip.
317s Preparing to unpack .../42-zip_3.0-14ubuntu2_s390x.deb ...
317s Unpacking zip (3.0-14ubuntu2) ...
317s Selecting previously unselected package unzip.
317s Preparing to unpack .../43-unzip_6.0-28ubuntu6_s390x.deb ...
317s Unpacking unzip (6.0-28ubuntu6) ...
317s Selecting previously unselected package xdg-utils.
317s Preparing to unpack .../44-xdg-utils_1.2.1-0ubuntu1_all.deb ...
317s Unpacking xdg-utils (1.2.1-0ubuntu1) ...
317s Selecting previously unselected package r-base-core.
317s Preparing to unpack .../45-r-base-core_4.4.2-1build1_s390x.deb ...
317s Unpacking r-base-core (4.4.2-1build1) ...
317s Selecting previously unselected package r-cran-littler.
317s Preparing to unpack .../46-r-cran-littler_0.3.20-2_s390x.deb ...
317s Unpacking r-cran-littler (0.3.20-2) ...
317s Selecting previously unselected package littler.
317s Preparing to unpack .../47-littler_0.3.20-2_all.deb ...
317s Unpacking littler (0.3.20-2) ...
317s Selecting previously unselected package node-html5shiv.
317s Preparing to unpack .../48-node-html5shiv_3.7.3+dfsg-5_all.deb ...
317s Unpacking node-html5shiv (3.7.3+dfsg-5) ...
317s Selecting previously unselected package r-cran-sys.
317s Preparing to unpack .../49-r-cran-sys_3.4.3-1_s390x.deb ...
317s Unpacking r-cran-sys (3.4.3-1) ...
317s Selecting previously unselected package r-cran-askpass.
317s Preparing to unpack .../50-r-cran-askpass_1.2.1-1_s390x.deb ...
317s Unpacking r-cran-askpass (1.2.1-1) ...
317s Selecting previously unselected package r-cran-brio.
317s Preparing to unpack .../51-r-cran-brio_1.1.5-1_s390x.deb ...
317s Unpacking r-cran-brio (1.1.5-1) ...
317s Selecting previously unselected package r-cran-ps.
317s Preparing to unpack .../52-r-cran-ps_1.8.1-1_s390x.deb ...
317s Unpacking r-cran-ps (1.8.1-1) ...
317s Selecting previously unselected package r-cran-r6.
317s Preparing to unpack .../53-r-cran-r6_2.5.1-1_all.deb ...
317s Unpacking r-cran-r6 (2.5.1-1) ...
317s Selecting previously unselected package r-cran-processx.
317s Preparing to unpack .../54-r-cran-processx_3.8.5-1_s390x.deb ...
317s Unpacking r-cran-processx (3.8.5-1) ...
317s Selecting previously unselected package r-cran-callr.
317s Preparing to unpack .../55-r-cran-callr_3.7.6-1_all.deb ...
317s Unpacking r-cran-callr (3.7.6-1) ...
317s Selecting previously unselected package r-cran-cli.
317s Preparing to unpack .../56-r-cran-cli_3.6.3-1_s390x.deb ...
317s Unpacking r-cran-cli (3.6.3-1) ...
317s Selecting previously unselected package r-cran-digest.
317s Preparing to unpack .../57-r-cran-digest_0.6.37-1_s390x.deb ...
317s Unpacking r-cran-digest (0.6.37-1) ...
317s Selecting previously unselected package r-cran-jsonlite.
317s Preparing to unpack .../58-r-cran-jsonlite_1.8.9+dfsg-1_s390x.deb ...
317s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ...
317s Selecting previously unselected package r-cran-lazyeval.
317s Preparing to unpack .../59-r-cran-lazyeval_0.2.2-1build1_s390x.deb ...
317s Unpacking r-cran-lazyeval (0.2.2-1build1) ...
317s Selecting previously unselected package r-cran-rex.
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317s Unpacking r-cran-rex (1.2.1-1) ...
317s Selecting previously unselected package r-cran-curl.
317s Preparing to unpack .../61-r-cran-curl_6.1.0+dfsg-1_s390x.deb ...
317s Unpacking r-cran-curl (6.1.0+dfsg-1) ...
317s Selecting previously unselected package r-cran-mime.
317s Preparing to unpack .../62-r-cran-mime_0.12-2_s390x.deb ...
317s Unpacking r-cran-mime (0.12-2) ...
317s Selecting previously unselected package r-cran-openssl.
317s Preparing to unpack .../63-r-cran-openssl_2.2.0+dfsg-1_s390x.deb ...
317s Unpacking r-cran-openssl (2.2.0+dfsg-1) ...
317s Selecting previously unselected package r-cran-httr.
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317s Unpacking r-cran-httr (1.4.7+dfsg-1) ...
317s Selecting previously unselected package r-cran-crayon.
317s Preparing to unpack .../65-r-cran-crayon_1.5.3-1_all.deb ...
317s Unpacking r-cran-crayon (1.5.3-1) ...
317s Selecting previously unselected package r-cran-withr.
317s Preparing to unpack .../66-r-cran-withr_3.0.2+dfsg-1_all.deb ...
317s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
317s Selecting previously unselected package r-cran-yaml.
317s Preparing to unpack .../67-r-cran-yaml_2.3.10-1_s390x.deb ...
317s Unpacking r-cran-yaml (2.3.10-1) ...
317s Selecting previously unselected package r-cran-covr.
317s Preparing to unpack .../68-r-cran-covr_3.6.4+dfsg-1_s390x.deb ...
317s Unpacking r-cran-covr (3.6.4+dfsg-1) ...
317s Selecting previously unselected package r-cran-desc.
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317s Unpacking r-cran-desc (1.4.3-1) ...
317s Selecting previously unselected package r-cran-diffobj.
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317s Selecting previously unselected package r-cran-evaluate.
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317s Unpacking r-cran-evaluate (1.0.3-1) ...
317s Selecting previously unselected package r-cran-fs.
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317s Unpacking r-cran-fs (1.6.5+dfsg-1) ...
318s Selecting previously unselected package r-cran-glue.
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318s Unpacking r-cran-rlang (1.1.5-1) ...
318s Selecting previously unselected package r-cran-lifecycle.
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318s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ...
318s Selecting previously unselected package r-cran-magrittr.
318s Preparing to unpack .../76-r-cran-magrittr_2.0.3-1_s390x.deb ...
318s Unpacking r-cran-magrittr (2.0.3-1) ...
318s Selecting previously unselected package r-cran-pkgbuild.
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318s Unpacking r-cran-pkgbuild (1.4.6-1) ...
318s Selecting previously unselected package r-cran-pkgkitten.
318s Preparing to unpack .../78-r-cran-pkgkitten_0.2.4-1_all.deb ...
318s Unpacking r-cran-pkgkitten (0.2.4-1) ...
318s Selecting previously unselected package r-cran-rprojroot.
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318s Unpacking r-cran-rprojroot (2.0.4-2) ...
318s Selecting previously unselected package r-cran-pkgload.
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318s Unpacking r-cran-pkgload (1.4.0-1) ...
318s Selecting previously unselected package r-cran-praise.
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318s Unpacking r-cran-praise (1.0.0-4build1) ...
318s Selecting previously unselected package r-cran-rcpp.
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318s Selecting previously unselected package r-cran-rcpphnsw.
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318s Unpacking r-cran-rcpphnsw (0.5.0+ds-1) ...
318s Selecting previously unselected package r-cran-waldo.
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318s Unpacking r-cran-waldo (0.6.1-1) ...
318s Selecting previously unselected package r-cran-testthat.
318s Preparing to unpack .../85-r-cran-testthat_3.2.3-1_s390x.deb ...
318s Unpacking r-cran-testthat (3.2.3-1) ...
318s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
318s Setting up libpixman-1-0:s390x (0.44.0-3) ...
318s Setting up libsharpyuv0:s390x (1.5.0-0.1) ...
318s Setting up libxrender1:s390x (1:0.9.10-1.1build1) ...
318s Setting up libdatrie1:s390x (0.2.13-3build1) ...
318s Setting up libxcb-render0:s390x (1.17.0-2) ...
318s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
318s Setting up unzip (6.0-28ubuntu6) ...
318s Setting up x11-common (1:7.7+23ubuntu3) ...
318s Setting up node-html5shiv (3.7.3+dfsg-5) ...
318s Setting up libdeflate0:s390x (1.23-1) ...
318s Setting up libxcb-shm0:s390x (1.17.0-2) ...
318s Setting up libgomp1:s390x (14.2.0-13ubuntu1) ...
318s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ...
318s Setting up zip (3.0-14ubuntu2) ...
318s Setting up libblas3:s390x (3.12.0-4) ...
318s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
318s Setting up libfreetype6:s390x (2.13.3+dfsg-1) ...
318s Setting up fonts-dejavu-mono (2.37-8) ...
318s Setting up libtcl8.6:s390x (8.6.16+dfsg-1) ...
318s Setting up fonts-dejavu-core (2.37-8) ...
318s Setting up libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ...
318s Setting up libgfortran5:s390x (14.2.0-13ubuntu1) ...
318s Setting up libwebp7:s390x (1.5.0-0.1) ...
318s Setting up libharfbuzz0b:s390x (10.2.0-1) ...
318s Setting up libthai-data (0.1.29-2build1) ...
318s Setting up libxss1:s390x (1:1.2.3-1build3) ...
318s Setting up libpaper2:s390x (2.2.5-0.3) ...
318s Setting up xdg-utils (1.2.1-0ubuntu1) ...
318s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
318s Setting up libjs-bootstrap (3.4.1+dfsg-3) ...
318s Setting up libjpeg8:s390x (8c-2ubuntu11) ...
318s Setting up libice6:s390x (2:1.1.1-1) ...
318s Setting up liblapack3:s390x (3.12.0-4) ...
318s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
318s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ...
318s Setting up libpaper-utils (2.2.5-0.3) ...
318s Setting up libthai0:s390x (0.1.29-2build1) ...
318s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu4) ...
318s Setting up libfontconfig1:s390x (2.15.0-1.1ubuntu2) ...
318s Setting up libsm6:s390x (2:1.2.4-1) ...
318s Setting up fontconfig (2.15.0-1.1ubuntu2) ...
320s Regenerating fonts cache... done.
320s Setting up libxft2:s390x (2.3.6-1build1) ...
320s Setting up libtk8.6:s390x (8.6.16-1) ...
320s Setting up libpango-1.0-0:s390x (1.56.1-1) ...
320s Setting up libcairo2:s390x (1.18.2-2) ...
320s Setting up libxt6t64:s390x (1:1.2.1-1.2build1) ...
320s Setting up libpangoft2-1.0-0:s390x (1.56.1-1) ...
320s Setting up libpangocairo-1.0-0:s390x (1.56.1-1) ...
320s Setting up r-base-core (4.4.2-1build1) ...
320s Creating config file /etc/R/Renviron with new version
320s Setting up r-cran-crayon (1.5.3-1) ...
320s Setting up r-cran-ps (1.8.1-1) ...
320s Setting up r-cran-lazyeval (0.2.2-1build1) ...
320s Setting up r-cran-r6 (2.5.1-1) ...
320s Setting up r-cran-pkgkitten (0.2.4-1) ...
320s Setting up r-cran-magrittr (2.0.3-1) ...
320s Setting up r-cran-littler (0.3.20-2) ...
320s Setting up r-cran-fs (1.6.5+dfsg-1) ...
320s Setting up r-cran-rcpp (1.0.14-1) ...
320s Setting up r-cran-curl (6.1.0+dfsg-1) ...
320s Setting up r-cran-brio (1.1.5-1) ...
320s Setting up r-cran-diffobj (0.3.5-1) ...
320s Setting up r-cran-rlang (1.1.5-1) ...
320s Setting up littler (0.3.20-2) ...
320s Setting up r-cran-rcpphnsw (0.5.0+ds-1) ...
320s Setting up r-cran-sys (3.4.3-1) ...
320s Setting up r-cran-withr (3.0.2+dfsg-1) ...
320s Setting up r-cran-processx (3.8.5-1) ...
320s Setting up r-cran-mime (0.12-2) ...
320s Setting up r-cran-praise (1.0.0-4build1) ...
320s Setting up r-cran-digest (0.6.37-1) ...
320s Setting up r-cran-yaml (2.3.10-1) ...
320s Setting up r-cran-evaluate (1.0.3-1) ...
320s Setting up r-cran-glue (1.8.0-1) ...
320s Setting up r-cran-cli (3.6.3-1) ...
320s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
320s Setting up r-cran-rprojroot (2.0.4-2) ...
320s Setting up r-cran-askpass (1.2.1-1) ...
320s Setting up r-cran-jsonlite (1.8.9+dfsg-1) ...
320s Setting up r-cran-rex (1.2.1-1) ...
320s Setting up r-cran-waldo (0.6.1-1) ...
320s Setting up r-cran-openssl (2.2.0+dfsg-1) ...
320s Setting up r-cran-callr (3.7.6-1) ...
320s Setting up r-cran-desc (1.4.3-1) ...
320s Setting up r-cran-httr (1.4.7+dfsg-1) ...
320s Setting up r-cran-covr (3.6.4+dfsg-1) ...
320s Setting up r-cran-pkgbuild (1.4.6-1) ...
320s Setting up r-cran-pkgload (1.4.0-1) ...
320s Setting up r-cran-testthat (3.2.3-1) ...
320s Processing triggers for libc-bin (2.40-4ubuntu1) ...
320s Processing triggers for man-db (2.13.0-1) ...
321s Processing triggers for install-info (7.1.1-1) ...
323s autopkgtest [05:37:32]: test run-unit-test: [-----------------------
323s BEGIN TEST testthat.R
323s 
323s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
323s Copyright (C) 2024 The R Foundation for Statistical Computing
323s Platform: s390x-ibm-linux-gnu
323s 
323s R is free software and comes with ABSOLUTELY NO WARRANTY.
323s You are welcome to redistribute it under certain conditions.
323s Type 'license()' or 'licence()' for distribution details.
323s 
323s R is a collaborative project with many contributors.
323s Type 'contributors()' for more information and
323s 'citation()' on how to cite R or R packages in publications.
323s 
323s Type 'demo()' for some demos, 'help()' for on-line help, or
323s 'help.start()' for an HTML browser interface to help.
323s Type 'q()' to quit R.
323s 
323s > library(testthat)
323s > library(RcppHNSW)
323s code for methods in class “Rcpp_HnswL2” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
323s code for methods in class “Rcpp_HnswL2” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
323s code for methods in class “Rcpp_HnswCosine” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
323s code for methods in class “Rcpp_HnswCosine” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
323s code for methods in class “Rcpp_HnswIp” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
323s code for methods in class “Rcpp_HnswIp” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
323s > 
323s > test_check("RcppHNSW")
324s [ FAIL 0 | WARN 0 | SKIP 0 | PASS 70 ]
324s > 
324s autopkgtest [05:37:33]: test run-unit-test: -----------------------]
325s autopkgtest [05:37:34]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
325s run-unit-test        PASS
325s autopkgtest [05:37:34]: test pkg-r-autopkgtest: preparing testbed
326s Reading package lists...
326s Building dependency tree...
326s Reading state information...
326s Starting pkgProblemResolver with broken count: 0
326s Starting 2 pkgProblemResolver with broken count: 0
326s Done
326s The following NEW packages will be installed:
326s   build-essential cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu
326s   dctrl-tools g++ g++-14 g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14
326s   gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-14
326s   gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools libasan8
326s   libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev
326s   libgfortran-14-dev libicu-dev libisl23 libitm1 libjpeg-dev
326s   libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblzma-dev libmpc3
326s   libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
326s   libpkgconf3 libpng-dev libreadline-dev libstdc++-14-dev libtirpc-dev
326s   libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev zlib1g-dev
326s 0 upgraded, 51 newly installed, 0 to remove and 0 not upgraded.
326s Need to get 82.1 MB of archives.
326s After this operation, 278 MB of additional disk space will be used.
326s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libisl23 s390x 0.27-1 [704 kB]
327s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB]
327s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-13ubuntu1 [9570 kB]
327s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14 s390x 14.2.0-13ubuntu1 [1026 B]
327s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [5452 B]
327s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x cpp s390x 4:14.1.0-2ubuntu1 [22.4 kB]
327s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libcc1-0 s390x 14.2.0-13ubuntu1 [50.7 kB]
327s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libitm1 s390x 14.2.0-13ubuntu1 [30.9 kB]
327s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libasan8 s390x 14.2.0-13ubuntu1 [2964 kB]
328s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libubsan1 s390x 14.2.0-13ubuntu1 [1184 kB]
328s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-14-dev s390x 14.2.0-13ubuntu1 [1037 kB]
328s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-13ubuntu1 [18.7 MB]
328s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14 s390x 14.2.0-13ubuntu1 [523 kB]
328s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [1204 B]
328s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x gcc s390x 4:14.1.0-2ubuntu1 [4996 B]
328s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++-14-dev s390x 14.2.0-13ubuntu1 [2612 kB]
328s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-13ubuntu1 [11.0 MB]
329s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14 s390x 14.2.0-13ubuntu1 [21.1 kB]
329s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x g++-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [956 B]
329s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x g++ s390x 4:14.1.0-2ubuntu1 [1076 B]
329s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x build-essential s390x 12.10ubuntu1 [4930 B]
329s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x dctrl-tools s390x 2.24-3build3 [106 kB]
329s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran-14-dev s390x 14.2.0-13ubuntu1 [654 kB]
329s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14-s390x-linux-gnu s390x 14.2.0-13ubuntu1 [10.3 MB]
329s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14 s390x 14.2.0-13ubuntu1 [13.2 kB]
329s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [1016 B]
329s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran s390x 4:14.1.0-2ubuntu1 [1160 B]
329s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x icu-devtools s390x 76.1-1ubuntu2 [225 kB]
329s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x libblas-dev s390x 3.12.0-4 [239 kB]
329s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libbz2-dev s390x 1.0.8-6 [39.1 kB]
329s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate-dev s390x 1.23-1 [52.2 kB]
329s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libicu-dev s390x 76.1-1ubuntu2 [12.2 MB]
330s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8-dev s390x 2.1.5-3ubuntu2 [281 kB]
330s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B]
330s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B]
330s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack-dev s390x 3.12.0-4 [5956 kB]
330s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libncurses-dev s390x 6.5-2 [404 kB]
330s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-16-0 s390x 10.42-4ubuntu3 [236 kB]
330s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-32-0 s390x 10.42-4ubuntu3 [221 kB]
330s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-posix3 s390x 10.42-4ubuntu3 [6820 B]
330s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-dev s390x 10.42-4ubuntu3 [815 kB]
330s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libpkgconf3 s390x 1.8.1-4 [31.2 kB]
330s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB]
330s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x libpng-dev s390x 1.6.44-3 [279 kB]
330s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libreadline-dev s390x 8.2-6 [187 kB]
330s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x liblzma-dev s390x 5.6.3-1 [183 kB]
330s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf-bin s390x 1.8.1-4 [21.5 kB]
330s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf s390x 1.8.1-4 [16.7 kB]
330s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x libtirpc-dev s390x 1.3.4+ds-1.3 [196 kB]
330s Get:50 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-dev all 4.4.2-1build1 [4342 B]
330s Get:51 http://ftpmaster.internal/ubuntu plucky/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
330s Fetched 82.1 MB in 4s (20.3 MB/s)
330s Selecting previously unselected package libisl23:s390x.
330s (Reading database ... 
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(Reading database ... 100%
(Reading database ... 63333 files and directories currently installed.)
330s Preparing to unpack .../00-libisl23_0.27-1_s390x.deb ...
330s Unpacking libisl23:s390x (0.27-1) ...
330s Selecting previously unselected package libmpc3:s390x.
330s Preparing to unpack .../01-libmpc3_1.3.1-1build2_s390x.deb ...
330s Unpacking libmpc3:s390x (1.3.1-1build2) ...
330s Selecting previously unselected package cpp-14-s390x-linux-gnu.
330s Preparing to unpack .../02-cpp-14-s390x-linux-gnu_14.2.0-13ubuntu1_s390x.deb ...
330s Unpacking cpp-14-s390x-linux-gnu (14.2.0-13ubuntu1) ...
330s Selecting previously unselected package cpp-14.
330s Preparing to unpack .../03-cpp-14_14.2.0-13ubuntu1_s390x.deb ...
330s Unpacking cpp-14 (14.2.0-13ubuntu1) ...
330s Selecting previously unselected package cpp-s390x-linux-gnu.
330s Preparing to unpack .../04-cpp-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ...
330s Unpacking cpp-s390x-linux-gnu (4:14.1.0-2ubuntu1) ...
331s Selecting previously unselected package cpp.
331s Preparing to unpack .../05-cpp_4%3a14.1.0-2ubuntu1_s390x.deb ...
331s Unpacking cpp (4:14.1.0-2ubuntu1) ...
331s Selecting previously unselected package libcc1-0:s390x.
331s Preparing to unpack .../06-libcc1-0_14.2.0-13ubuntu1_s390x.deb ...
331s Unpacking libcc1-0:s390x (14.2.0-13ubuntu1) ...
331s Selecting previously unselected package libitm1:s390x.
331s Preparing to unpack .../07-libitm1_14.2.0-13ubuntu1_s390x.deb ...
331s Unpacking libitm1:s390x (14.2.0-13ubuntu1) ...
331s Selecting previously unselected package libasan8:s390x.
331s Preparing to unpack .../08-libasan8_14.2.0-13ubuntu1_s390x.deb ...
331s Unpacking libasan8:s390x (14.2.0-13ubuntu1) ...
331s Selecting previously unselected package libubsan1:s390x.
331s Preparing to unpack .../09-libubsan1_14.2.0-13ubuntu1_s390x.deb ...
331s Unpacking libubsan1:s390x (14.2.0-13ubuntu1) ...
331s Selecting previously unselected package libgcc-14-dev:s390x.
331s Preparing to unpack .../10-libgcc-14-dev_14.2.0-13ubuntu1_s390x.deb ...
331s Unpacking libgcc-14-dev:s390x (14.2.0-13ubuntu1) ...
331s Selecting previously unselected package gcc-14-s390x-linux-gnu.
331s Preparing to unpack .../11-gcc-14-s390x-linux-gnu_14.2.0-13ubuntu1_s390x.deb ...
331s Unpacking gcc-14-s390x-linux-gnu (14.2.0-13ubuntu1) ...
331s Selecting previously unselected package gcc-14.
331s Preparing to unpack .../12-gcc-14_14.2.0-13ubuntu1_s390x.deb ...
331s Unpacking gcc-14 (14.2.0-13ubuntu1) ...
331s Selecting previously unselected package gcc-s390x-linux-gnu.
331s Preparing to unpack .../13-gcc-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ...
331s Unpacking gcc-s390x-linux-gnu (4:14.1.0-2ubuntu1) ...
331s Selecting previously unselected package gcc.
331s Preparing to unpack .../14-gcc_4%3a14.1.0-2ubuntu1_s390x.deb ...
331s Unpacking gcc (4:14.1.0-2ubuntu1) ...
331s Selecting previously unselected package libstdc++-14-dev:s390x.
331s Preparing to unpack .../15-libstdc++-14-dev_14.2.0-13ubuntu1_s390x.deb ...
331s Unpacking libstdc++-14-dev:s390x (14.2.0-13ubuntu1) ...
331s Selecting previously unselected package g++-14-s390x-linux-gnu.
331s Preparing to unpack .../16-g++-14-s390x-linux-gnu_14.2.0-13ubuntu1_s390x.deb ...
331s Unpacking g++-14-s390x-linux-gnu (14.2.0-13ubuntu1) ...
331s Selecting previously unselected package g++-14.
331s Preparing to unpack .../17-g++-14_14.2.0-13ubuntu1_s390x.deb ...
331s Unpacking g++-14 (14.2.0-13ubuntu1) ...
331s Selecting previously unselected package g++-s390x-linux-gnu.
331s Preparing to unpack .../18-g++-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ...
331s Unpacking g++-s390x-linux-gnu (4:14.1.0-2ubuntu1) ...
331s Selecting previously unselected package g++.
331s Preparing to unpack .../19-g++_4%3a14.1.0-2ubuntu1_s390x.deb ...
331s Unpacking g++ (4:14.1.0-2ubuntu1) ...
331s Selecting previously unselected package build-essential.
331s Preparing to unpack .../20-build-essential_12.10ubuntu1_s390x.deb ...
331s Unpacking build-essential (12.10ubuntu1) ...
331s Selecting previously unselected package dctrl-tools.
331s Preparing to unpack .../21-dctrl-tools_2.24-3build3_s390x.deb ...
331s Unpacking dctrl-tools (2.24-3build3) ...
331s Selecting previously unselected package libgfortran-14-dev:s390x.
331s Preparing to unpack .../22-libgfortran-14-dev_14.2.0-13ubuntu1_s390x.deb ...
331s Unpacking libgfortran-14-dev:s390x (14.2.0-13ubuntu1) ...
331s Selecting previously unselected package gfortran-14-s390x-linux-gnu.
331s Preparing to unpack .../23-gfortran-14-s390x-linux-gnu_14.2.0-13ubuntu1_s390x.deb ...
331s Unpacking gfortran-14-s390x-linux-gnu (14.2.0-13ubuntu1) ...
331s Selecting previously unselected package gfortran-14.
331s Preparing to unpack .../24-gfortran-14_14.2.0-13ubuntu1_s390x.deb ...
331s Unpacking gfortran-14 (14.2.0-13ubuntu1) ...
331s Selecting previously unselected package gfortran-s390x-linux-gnu.
331s Preparing to unpack .../25-gfortran-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ...
331s Unpacking gfortran-s390x-linux-gnu (4:14.1.0-2ubuntu1) ...
331s Selecting previously unselected package gfortran.
331s Preparing to unpack .../26-gfortran_4%3a14.1.0-2ubuntu1_s390x.deb ...
331s Unpacking gfortran (4:14.1.0-2ubuntu1) ...
331s Selecting previously unselected package icu-devtools.
331s Preparing to unpack .../27-icu-devtools_76.1-1ubuntu2_s390x.deb ...
331s Unpacking icu-devtools (76.1-1ubuntu2) ...
331s Selecting previously unselected package libblas-dev:s390x.
331s Preparing to unpack .../28-libblas-dev_3.12.0-4_s390x.deb ...
331s Unpacking libblas-dev:s390x (3.12.0-4) ...
331s Selecting previously unselected package libbz2-dev:s390x.
331s Preparing to unpack .../29-libbz2-dev_1.0.8-6_s390x.deb ...
331s Unpacking libbz2-dev:s390x (1.0.8-6) ...
332s Selecting previously unselected package libdeflate-dev:s390x.
332s Preparing to unpack .../30-libdeflate-dev_1.23-1_s390x.deb ...
332s Unpacking libdeflate-dev:s390x (1.23-1) ...
332s Selecting previously unselected package libicu-dev:s390x.
332s Preparing to unpack .../31-libicu-dev_76.1-1ubuntu2_s390x.deb ...
332s Unpacking libicu-dev:s390x (76.1-1ubuntu2) ...
332s Selecting previously unselected package libjpeg-turbo8-dev:s390x.
332s Preparing to unpack .../32-libjpeg-turbo8-dev_2.1.5-3ubuntu2_s390x.deb ...
332s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ...
332s Selecting previously unselected package libjpeg8-dev:s390x.
332s Preparing to unpack .../33-libjpeg8-dev_8c-2ubuntu11_s390x.deb ...
332s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ...
332s Selecting previously unselected package libjpeg-dev:s390x.
332s Preparing to unpack .../34-libjpeg-dev_8c-2ubuntu11_s390x.deb ...
332s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ...
332s Selecting previously unselected package liblapack-dev:s390x.
332s Preparing to unpack .../35-liblapack-dev_3.12.0-4_s390x.deb ...
332s Unpacking liblapack-dev:s390x (3.12.0-4) ...
332s Selecting previously unselected package libncurses-dev:s390x.
332s Preparing to unpack .../36-libncurses-dev_6.5-2_s390x.deb ...
332s Unpacking libncurses-dev:s390x (6.5-2) ...
332s Selecting previously unselected package libpcre2-16-0:s390x.
332s Preparing to unpack .../37-libpcre2-16-0_10.42-4ubuntu3_s390x.deb ...
332s Unpacking libpcre2-16-0:s390x (10.42-4ubuntu3) ...
332s Selecting previously unselected package libpcre2-32-0:s390x.
332s Preparing to unpack .../38-libpcre2-32-0_10.42-4ubuntu3_s390x.deb ...
332s Unpacking libpcre2-32-0:s390x (10.42-4ubuntu3) ...
332s Selecting previously unselected package libpcre2-posix3:s390x.
332s Preparing to unpack .../39-libpcre2-posix3_10.42-4ubuntu3_s390x.deb ...
332s Unpacking libpcre2-posix3:s390x (10.42-4ubuntu3) ...
332s Selecting previously unselected package libpcre2-dev:s390x.
332s Preparing to unpack .../40-libpcre2-dev_10.42-4ubuntu3_s390x.deb ...
332s Unpacking libpcre2-dev:s390x (10.42-4ubuntu3) ...
332s Selecting previously unselected package libpkgconf3:s390x.
332s Preparing to unpack .../41-libpkgconf3_1.8.1-4_s390x.deb ...
332s Unpacking libpkgconf3:s390x (1.8.1-4) ...
332s Selecting previously unselected package zlib1g-dev:s390x.
332s Preparing to unpack .../42-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_s390x.deb ...
332s Unpacking zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
332s Selecting previously unselected package libpng-dev:s390x.
332s Preparing to unpack .../43-libpng-dev_1.6.44-3_s390x.deb ...
332s Unpacking libpng-dev:s390x (1.6.44-3) ...
332s Selecting previously unselected package libreadline-dev:s390x.
332s Preparing to unpack .../44-libreadline-dev_8.2-6_s390x.deb ...
332s Unpacking libreadline-dev:s390x (8.2-6) ...
332s Selecting previously unselected package liblzma-dev:s390x.
332s Preparing to unpack .../45-liblzma-dev_5.6.3-1_s390x.deb ...
332s Unpacking liblzma-dev:s390x (5.6.3-1) ...
332s Selecting previously unselected package pkgconf-bin.
332s Preparing to unpack .../46-pkgconf-bin_1.8.1-4_s390x.deb ...
332s Unpacking pkgconf-bin (1.8.1-4) ...
332s Selecting previously unselected package pkgconf:s390x.
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332s Unpacking pkgconf:s390x (1.8.1-4) ...
332s Selecting previously unselected package libtirpc-dev:s390x.
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332s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ...
332s Setting up libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ...
332s Setting up libncurses-dev:s390x (6.5-2) ...
332s Setting up libreadline-dev:s390x (8.2-6) ...
332s Setting up libpcre2-16-0:s390x (10.42-4ubuntu3) ...
332s Setting up libpcre2-32-0:s390x (10.42-4ubuntu3) ...
332s Setting up libtirpc-dev:s390x (1.3.4+ds-1.3) ...
332s Setting up libpkgconf3:s390x (1.8.1-4) ...
332s Setting up libmpc3:s390x (1.3.1-1build2) ...
332s Setting up icu-devtools (76.1-1ubuntu2) ...
332s Setting up pkgconf-bin (1.8.1-4) ...
332s Setting up liblzma-dev:s390x (5.6.3-1) ...
332s Setting up libubsan1:s390x (14.2.0-13ubuntu1) ...
332s Setting up zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
332s Setting up libpcre2-posix3:s390x (10.42-4ubuntu3) ...
332s Setting up libasan8:s390x (14.2.0-13ubuntu1) ...
332s Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ...
332s Setting up libisl23:s390x (0.27-1) ...
332s Setting up libdeflate-dev:s390x (1.23-1) ...
332s Setting up libicu-dev:s390x (76.1-1ubuntu2) ...
332s Setting up libcc1-0:s390x (14.2.0-13ubuntu1) ...
332s Setting up libblas-dev:s390x (3.12.0-4) ...
332s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so to provide /usr/lib/s390x-linux-gnu/libblas.so (libblas.so-s390x-linux-gnu) in auto mode
332s Setting up dctrl-tools (2.24-3build3) ...
332s Setting up libitm1:s390x (14.2.0-13ubuntu1) ...
332s Setting up libbz2-dev:s390x (1.0.8-6) ...
332s Setting up libpcre2-dev:s390x (10.42-4ubuntu3) ...
332s Setting up libpng-dev:s390x (1.6.44-3) ...
332s Setting up libjpeg-dev:s390x (8c-2ubuntu11) ...
332s Setting up pkgconf:s390x (1.8.1-4) ...
332s Setting up liblapack-dev:s390x (3.12.0-4) ...
332s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode
332s Setting up cpp-14-s390x-linux-gnu (14.2.0-13ubuntu1) ...
332s Setting up cpp-14 (14.2.0-13ubuntu1) ...
332s Setting up libgcc-14-dev:s390x (14.2.0-13ubuntu1) ...
332s Setting up libstdc++-14-dev:s390x (14.2.0-13ubuntu1) ...
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332s Setting up g++-14-s390x-linux-gnu (14.2.0-13ubuntu1) ...
332s Setting up cpp (4:14.1.0-2ubuntu1) ...
332s Setting up gfortran-14-s390x-linux-gnu (14.2.0-13ubuntu1) ...
332s Setting up g++-s390x-linux-gnu (4:14.1.0-2ubuntu1) ...
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332s Setting up g++-14 (14.2.0-13ubuntu1) ...
332s Setting up gfortran-14 (14.2.0-13ubuntu1) ...
332s Setting up gfortran-s390x-linux-gnu (4:14.1.0-2ubuntu1) ...
332s Setting up gcc (4:14.1.0-2ubuntu1) ...
332s Setting up g++ (4:14.1.0-2ubuntu1) ...
332s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
332s Setting up build-essential (12.10ubuntu1) ...
332s Setting up gfortran (4:14.1.0-2ubuntu1) ...
332s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
332s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
332s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
332s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
332s Setting up r-base-dev (4.4.2-1build1) ...
332s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
332s Processing triggers for libc-bin (2.40-4ubuntu1) ...
332s Processing triggers for man-db (2.13.0-1) ...
332s Processing triggers for install-info (7.1.1-1) ...
333s autopkgtest [05:37:42]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
333s autopkgtest [05:37:42]: test pkg-r-autopkgtest: [-----------------------
334s Test: Try to load the R library RcppHNSW
334s 
334s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
334s Copyright (C) 2024 The R Foundation for Statistical Computing
334s Platform: s390x-ibm-linux-gnu
334s 
334s R is free software and comes with ABSOLUTELY NO WARRANTY.
334s You are welcome to redistribute it under certain conditions.
334s Type 'license()' or 'licence()' for distribution details.
334s 
334s R is a collaborative project with many contributors.
334s Type 'contributors()' for more information and
334s 'citation()' on how to cite R or R packages in publications.
334s 
334s Type 'demo()' for some demos, 'help()' for on-line help, or
334s 'help.start()' for an HTML browser interface to help.
334s Type 'q()' to quit R.
334s 
334s > library('RcppHNSW')
334s code for methods in class “Rcpp_HnswL2” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
334s code for methods in class “Rcpp_HnswL2” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
334s code for methods in class “Rcpp_HnswCosine” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
334s code for methods in class “Rcpp_HnswCosine” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
334s code for methods in class “Rcpp_HnswIp” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
334s code for methods in class “Rcpp_HnswIp” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
334s > 
334s > 
334s Other tests are currently unsupported!
334s They will be progressively added.
334s autopkgtest [05:37:43]: test pkg-r-autopkgtest: -----------------------]
335s pkg-r-autopkgtest    PASS
335s autopkgtest [05:37:44]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
335s autopkgtest [05:37:44]: @@@@@@@@@@@@@@@@@@@@ summary
335s run-unit-test        PASS
335s pkg-r-autopkgtest    PASS
340s nova [W] Using flock in prodstack6-s390x
340s Creating nova instance adt-plucky-s390x-r-cran-rcpphnsw-20250204-052222-juju-7f2275-prod-proposed-migration-environment-20-a4bd6a60-b2b7-47bf-b4e8-ec18dd33f99e from image adt/ubuntu-plucky-s390x-server-20250203.img (UUID 247705cf-ad10-4dc6-8dfa-317dcfe4f398)...
340s nova [W] Timed out waiting for 8ca75a92-c1f7-49db-9edf-447efd7a76e6 to get deleted.