0s autopkgtest [18:21:35]: starting date and time: 2025-03-15 18:21:35+0000
  0s autopkgtest [18:21:35]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  0s autopkgtest [18:21:35]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.5hjklh7k/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-rann --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-s390x-8.secgroup --name adt-plucky-s390x-r-cran-rann-20250315-182135-juju-7f2275-prod-proposed-migration-environment-2-e0108ca0-a43d-4d6c-9f5e-941d605f34bf --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
108s autopkgtest [18:23:23]: testbed dpkg architecture: s390x
108s autopkgtest [18:23:23]: testbed apt version: 2.9.33
108s autopkgtest [18:23:23]: @@@@@@@@@@@@@@@@@@@@ test bed setup
109s autopkgtest [18:23:24]: testbed release detected to be: None
109s autopkgtest [18:23:24]: updating testbed package index (apt update)
110s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB]
110s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
110s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
110s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
110s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB]
110s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB]
110s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB]
110s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [113 kB]
110s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1824 B]
110s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B]
110s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [320 kB]
111s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [13.4 kB]
111s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3776 B]
111s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [240 B]
111s Fetched 1073 kB in 1s (962 kB/s)
111s Reading package lists...
112s Reading package lists...
112s Building dependency tree...
112s Reading state information...
112s Calculating upgrade...
112s Calculating upgrade...
112s The following packages were automatically installed and are no longer required:
112s   libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64
112s   linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic
112s   linux-modules-6.11.0-8-generic linux-tools-6.11.0-8
112s   linux-tools-6.11.0-8-generic
112s Use 'sudo apt autoremove' to remove them.
112s The following packages will be upgraded:
112s   pinentry-curses python3-jinja2 strace
112s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
112s Need to get 652 kB of archives.
112s After this operation, 27.6 kB of additional disk space will be used.
112s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB]
113s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x pinentry-curses s390x 1.3.1-2ubuntu3 [42.9 kB]
113s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB]
113s Fetched 652 kB in 1s (916 kB/s)
113s (Reading database ... 
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(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81428 files and directories currently installed.)
113s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ...
113s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ...
113s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_s390x.deb ...
113s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ...
113s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ...
113s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ...
113s Setting up pinentry-curses (1.3.1-2ubuntu3) ...
113s Setting up python3-jinja2 (3.1.5-2ubuntu1) ...
114s Setting up strace (6.13+ds-1ubuntu1) ...
114s Processing triggers for man-db (2.13.0-1) ...
114s Reading package lists...
114s Building dependency tree...
114s Reading state information...
114s Solving dependencies...
114s The following packages will be REMOVED:
114s   libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64*
114s   linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
114s   linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8*
114s   linux-tools-6.11.0-8-generic*
115s 0 upgraded, 0 newly installed, 9 to remove and 5 not upgraded.
115s After this operation, 167 MB disk space will be freed.
115s (Reading database ... 
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(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81428 files and directories currently installed.)
115s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
115s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
115s Removing libpython3.12t64:s390x (3.12.9-1) ...
115s Removing libpython3.12-stdlib:s390x (3.12.9-1) ...
115s Removing libnsl2:s390x (1.3.0-3build3) ...
115s Removing libpython3.12-minimal:s390x (3.12.9-1) ...
115s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
115s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
116s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
116s Processing triggers for libc-bin (2.41-1ubuntu1) ...
116s (Reading database ... 
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(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56328 files and directories currently installed.)
116s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ...
116s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
116s autopkgtest [18:23:31]: upgrading testbed (apt dist-upgrade and autopurge)
116s Reading package lists...
116s Building dependency tree...
116s Reading state information...
116s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
116s Starting 2 pkgProblemResolver with broken count: 0
116s Done
117s Entering ResolveByKeep
117s 
117s Calculating upgrade...
117s The following packages will be upgraded:
117s   libc-bin libc-dev-bin libc6 libc6-dev locales
117s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
117s Need to get 9512 kB of archives.
117s After this operation, 8192 B of additional disk space will be used.
117s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6-dev s390x 2.41-1ubuntu2 [1678 kB]
118s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-dev-bin s390x 2.41-1ubuntu2 [24.3 kB]
118s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6 s390x 2.41-1ubuntu2 [2892 kB]
119s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-bin s390x 2.41-1ubuntu2 [671 kB]
120s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x locales all 2.41-1ubuntu2 [4246 kB]
121s Preconfiguring packages ...
121s Fetched 9512 kB in 4s (2292 kB/s)
121s (Reading database ... 
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
121s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_s390x.deb ...
121s Unpacking libc6-dev:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
121s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_s390x.deb ...
121s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
121s Preparing to unpack .../libc6_2.41-1ubuntu2_s390x.deb ...
121s Unpacking libc6:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
121s Setting up libc6:s390x (2.41-1ubuntu2) ...
121s (Reading database ... 
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
121s Preparing to unpack .../libc-bin_2.41-1ubuntu2_s390x.deb ...
121s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
122s Setting up libc-bin (2.41-1ubuntu2) ...
122s (Reading database ... 
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
122s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ...
122s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
122s Setting up locales (2.41-1ubuntu2) ...
122s Generating locales (this might take a while)...
123s   en_US.UTF-8... done
123s Generation complete.
123s Setting up libc-dev-bin (2.41-1ubuntu2) ...
123s Setting up libc6-dev:s390x (2.41-1ubuntu2) ...
123s Processing triggers for man-db (2.13.0-1) ...
123s Processing triggers for systemd (257.3-1ubuntu3) ...
124s Reading package lists...
124s Building dependency tree...
124s Reading state information...
125s Starting pkgProblemResolver with broken count: 0
125s Starting 2 pkgProblemResolver with broken count: 0
125s Done
125s Solving dependencies...
125s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
125s autopkgtest [18:23:40]: rebooting testbed after setup commands that affected boot
143s autopkgtest [18:23:58]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP Wed Mar 12 14:53:49 UTC 2025
146s autopkgtest [18:24:01]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-rann
148s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-rann 2.6.2-1 (dsc) [2067 B]
148s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-rann 2.6.2-1 (tar) [59.8 kB]
148s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-rann 2.6.2-1 (diff) [2692 B]
148s gpgv: Signature made Tue Sep  3 08:16:41 2024 UTC
148s gpgv:                using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502
148s gpgv:                issuer "plessy@debian.org"
148s gpgv: Can't check signature: No public key
148s dpkg-source: warning: cannot verify inline signature for ./r-cran-rann_2.6.2-1.dsc: no acceptable signature found
148s autopkgtest [18:24:03]: testing package r-cran-rann version 2.6.2-1
149s autopkgtest [18:24:04]: build not needed
151s autopkgtest [18:24:06]: test run-unit-test: preparing testbed
151s Reading package lists...
151s Building dependency tree...
151s Reading state information...
151s Starting pkgProblemResolver with broken count: 0
151s Starting 2 pkgProblemResolver with broken count: 0
151s Done
152s The following NEW packages will be installed:
152s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3
152s   libcairo2 libdatrie1 libdeflate0 libfontconfig1 libfreetype6 libgfortran5
152s   libgomp1 libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8
152s   libjpeg8 liblapack3 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
152s   libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6
152s   libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0
152s   libxft2 libxrender1 libxss1 libxt6t64 r-base-core r-cran-brio r-cran-callr
152s   r-cran-cli r-cran-crayon r-cran-desc r-cran-diffobj r-cran-digest
152s   r-cran-evaluate r-cran-fs r-cran-glue r-cran-jsonlite r-cran-lifecycle
152s   r-cran-magrittr r-cran-pkgbuild r-cran-pkgload r-cran-praise r-cran-processx
152s   r-cran-ps r-cran-r6 r-cran-rann r-cran-rlang r-cran-rprojroot
152s   r-cran-testthat r-cran-waldo r-cran-withr unzip x11-common xdg-utils zip
152s 0 upgraded, 69 newly installed, 0 to remove and 0 not upgraded.
152s Need to get 50.3 MB of archives.
152s After this operation, 98.2 MB of additional disk space will be used.
152s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB]
152s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB]
153s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB]
153s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-2ubuntu1 [37.5 kB]
153s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-2ubuntu1 [150 kB]
153s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig s390x 2.15.0-2ubuntu1 [191 kB]
153s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.1-2 [252 kB]
153s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB]
153s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB]
153s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B]
153s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB]
153s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB]
154s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB]
154s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.23-1 [46.1 kB]
154s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 15-20250222-0ubuntu1 [620 kB]
154s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 15-20250222-0ubuntu1 [152 kB]
154s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB]
154s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB]
155s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB]
155s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB]
155s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB]
155s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B]
155s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.1-2 [2971 kB]
157s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libthai-data all 0.1.29-2build1 [158 kB]
157s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB]
157s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x libpango-1.0-0 s390x 1.56.2-1 [253 kB]
157s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x libpangoft2-1.0-0 s390x 1.56.2-1 [50.2 kB]
157s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x libpangocairo-1.0-0 s390x 1.56.2-1 [28.2 kB]
157s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB]
157s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB]
157s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB]
157s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libsm6 s390x 2:1.2.4-1 [18.4 kB]
157s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB]
157s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB]
157s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB]
157s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB]
158s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB]
158s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B]
158s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.16-1 [830 kB]
158s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB]
158s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x zip s390x 3.0-14ubuntu2 [187 kB]
158s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x unzip s390x 6.0-28ubuntu6 [186 kB]
158s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
159s Get:44 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-core s390x 4.4.3-1 [28.6 MB]
164s Get:45 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-brio s390x 1.1.5-1 [38.6 kB]
164s Get:46 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ps s390x 1.9.0-1 [408 kB]
164s Get:47 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r6 all 2.6.1-1 [101 kB]
164s Get:48 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-processx s390x 3.8.6-1 [364 kB]
164s Get:49 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-callr all 3.7.6-1 [458 kB]
164s Get:50 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cli s390x 3.6.4-1 [1379 kB]
165s Get:51 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-crayon all 1.5.3-1 [165 kB]
165s Get:52 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-desc all 1.4.3-1 [359 kB]
165s Get:53 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-diffobj s390x 0.3.5-1 [1115 kB]
165s Get:54 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-digest s390x 0.6.37-1 [205 kB]
165s Get:55 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-evaluate all 1.0.3-1 [114 kB]
165s Get:56 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fs s390x 1.6.5+dfsg-1 [245 kB]
165s Get:57 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-glue s390x 1.8.0-1 [164 kB]
165s Get:58 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-jsonlite s390x 1.9.1+dfsg-1 [447 kB]
165s Get:59 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rlang s390x 1.1.5-1 [1713 kB]
165s Get:60 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
165s Get:61 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB]
165s Get:62 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgbuild all 1.4.6-1 [213 kB]
165s Get:63 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rprojroot all 2.0.4-2 [125 kB]
165s Get:64 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-withr all 3.0.2+dfsg-1 [214 kB]
165s Get:65 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgload all 1.4.0-1 [247 kB]
165s Get:66 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-praise all 1.0.0-4build1 [20.3 kB]
165s Get:67 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rann s390x 2.6.2-1 [48.8 kB]
165s Get:68 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-waldo all 0.6.1-2 [150 kB]
165s Get:69 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-testthat s390x 3.2.3-1 [1641 kB]
166s Preconfiguring packages ...
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166s Preparing to unpack .../00-libfreetype6_2.13.3+dfsg-1_s390x.deb ...
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166s Selecting previously unselected package fonts-dejavu-mono.
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166s Selecting previously unselected package fonts-dejavu-core.
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166s Selecting previously unselected package libblas3:s390x.
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166s Selecting previously unselected package libxrender1:s390x.
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166s Selecting previously unselected package libpango-1.0-0:s390x.
166s Preparing to unpack .../25-libpango-1.0-0_1.56.2-1_s390x.deb ...
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166s Selecting previously unselected package libpangoft2-1.0-0:s390x.
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166s Selecting previously unselected package libpangocairo-1.0-0:s390x.
166s Preparing to unpack .../27-libpangocairo-1.0-0_1.56.2-1_s390x.deb ...
166s Unpacking libpangocairo-1.0-0:s390x (1.56.2-1) ...
166s Selecting previously unselected package libpaper2:s390x.
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166s Unpacking libpaper2:s390x (2.2.5-0.3) ...
166s Selecting previously unselected package libpaper-utils.
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166s Selecting previously unselected package libsharpyuv0:s390x.
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166s Selecting previously unselected package libsm6:s390x.
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166s Selecting previously unselected package libxft2:s390x.
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166s Selecting previously unselected package libxss1:s390x.
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167s Selecting previously unselected package r-cran-r6.
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167s Selecting previously unselected package r-cran-callr.
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167s Selecting previously unselected package r-cran-diffobj.
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167s Unpacking r-cran-fs (1.6.5+dfsg-1) ...
167s Selecting previously unselected package r-cran-glue.
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167s Selecting previously unselected package r-cran-jsonlite.
167s Preparing to unpack .../57-r-cran-jsonlite_1.9.1+dfsg-1_s390x.deb ...
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167s Selecting previously unselected package r-cran-rlang.
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167s Unpacking r-cran-rlang (1.1.5-1) ...
167s Selecting previously unselected package r-cran-lifecycle.
167s Preparing to unpack .../59-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ...
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167s Unpacking r-cran-praise (1.0.0-4build1) ...
167s Selecting previously unselected package r-cran-rann.
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167s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
167s Setting up libpixman-1-0:s390x (0.44.0-3) ...
167s Setting up libsharpyuv0:s390x (1.5.0-0.1) ...
167s Setting up libxrender1:s390x (1:0.9.10-1.1build1) ...
167s Setting up libdatrie1:s390x (0.2.13-3build1) ...
167s Setting up libxcb-render0:s390x (1.17.0-2) ...
167s Setting up unzip (6.0-28ubuntu6) ...
167s Setting up x11-common (1:7.7+23ubuntu3) ...
167s Setting up libdeflate0:s390x (1.23-1) ...
167s Setting up libxcb-shm0:s390x (1.17.0-2) ...
167s Setting up libgomp1:s390x (15-20250222-0ubuntu1) ...
167s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ...
167s Setting up zip (3.0-14ubuntu2) ...
167s Setting up libblas3:s390x (3.12.1-2) ...
167s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
167s Setting up libfreetype6:s390x (2.13.3+dfsg-1) ...
167s Setting up fonts-dejavu-mono (2.37-8) ...
167s Setting up libtcl8.6:s390x (8.6.16+dfsg-1) ...
167s Setting up fonts-dejavu-core (2.37-8) ...
167s Setting up libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ...
167s Setting up libgfortran5:s390x (15-20250222-0ubuntu1) ...
167s Setting up libwebp7:s390x (1.5.0-0.1) ...
167s Setting up libharfbuzz0b:s390x (10.2.0-1) ...
167s Setting up libthai-data (0.1.29-2build1) ...
167s Setting up libxss1:s390x (1:1.2.3-1build3) ...
167s Setting up libpaper2:s390x (2.2.5-0.3) ...
167s Setting up xdg-utils (1.2.1-2ubuntu1) ...
167s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
167s Setting up libjpeg8:s390x (8c-2ubuntu11) ...
167s Setting up libice6:s390x (2:1.1.1-1) ...
167s Setting up liblapack3:s390x (3.12.1-2) ...
167s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
167s Setting up fontconfig-config (2.15.0-2ubuntu1) ...
167s Setting up libpaper-utils (2.2.5-0.3) ...
167s Setting up libthai0:s390x (0.1.29-2build1) ...
167s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu4) ...
167s Setting up libfontconfig1:s390x (2.15.0-2ubuntu1) ...
167s Setting up libsm6:s390x (2:1.2.4-1) ...
167s Setting up fontconfig (2.15.0-2ubuntu1) ...
169s Regenerating fonts cache... done.
169s Setting up libxft2:s390x (2.3.6-1build1) ...
169s Setting up libtk8.6:s390x (8.6.16-1) ...
169s Setting up libpango-1.0-0:s390x (1.56.2-1) ...
169s Setting up libcairo2:s390x (1.18.2-2) ...
169s Setting up libxt6t64:s390x (1:1.2.1-1.2build1) ...
169s Setting up libpangoft2-1.0-0:s390x (1.56.2-1) ...
169s Setting up libpangocairo-1.0-0:s390x (1.56.2-1) ...
169s Setting up r-base-core (4.4.3-1) ...
169s Creating config file /etc/R/Renviron with new version
169s Setting up r-cran-crayon (1.5.3-1) ...
169s Setting up r-cran-ps (1.9.0-1) ...
169s Setting up r-cran-r6 (2.6.1-1) ...
169s Setting up r-cran-magrittr (2.0.3-1) ...
169s Setting up r-cran-fs (1.6.5+dfsg-1) ...
169s Setting up r-cran-brio (1.1.5-1) ...
169s Setting up r-cran-diffobj (0.3.5-1) ...
169s Setting up r-cran-rlang (1.1.5-1) ...
169s Setting up r-cran-withr (3.0.2+dfsg-1) ...
169s Setting up r-cran-processx (3.8.6-1) ...
169s Setting up r-cran-praise (1.0.0-4build1) ...
169s Setting up r-cran-digest (0.6.37-1) ...
169s Setting up r-cran-rann (2.6.2-1) ...
169s Setting up r-cran-evaluate (1.0.3-1) ...
169s Setting up r-cran-glue (1.8.0-1) ...
169s Setting up r-cran-cli (3.6.4-1) ...
169s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
169s Setting up r-cran-rprojroot (2.0.4-2) ...
169s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ...
169s Setting up r-cran-waldo (0.6.1-2) ...
169s Setting up r-cran-callr (3.7.6-1) ...
169s Setting up r-cran-desc (1.4.3-1) ...
169s Setting up r-cran-pkgbuild (1.4.6-1) ...
169s Setting up r-cran-pkgload (1.4.0-1) ...
169s Setting up r-cran-testthat (3.2.3-1) ...
169s Processing triggers for libc-bin (2.41-1ubuntu2) ...
169s Processing triggers for man-db (2.13.0-1) ...
170s Processing triggers for install-info (7.1.1-1) ...
171s autopkgtest [18:24:26]: test run-unit-test: [-----------------------
171s BEGIN TEST testthat.R
171s 
171s R version 4.4.3 (2025-02-28) -- "Trophy Case"
171s Copyright (C) 2025 The R Foundation for Statistical Computing
171s Platform: s390x-ibm-linux-gnu
171s 
171s R is free software and comes with ABSOLUTELY NO WARRANTY.
171s You are welcome to redistribute it under certain conditions.
171s Type 'license()' or 'licence()' for distribution details.
171s 
171s R is a collaborative project with many contributors.
171s Type 'contributors()' for more information and
171s 'citation()' on how to cite R or R packages in publications.
171s 
171s Type 'demo()' for some demos, 'help()' for on-line help, or
171s 'help.start()' for an HTML browser interface to help.
171s Type 'q()' to quit R.
171s 
171s > library(testthat)
172s > library(RANN)
172s > 
172s > test_check("RANN")
172s [ FAIL 0 | WARN 0 | SKIP 0 | PASS 16 ]
172s > 
172s autopkgtest [18:24:27]: test run-unit-test: -----------------------]
173s autopkgtest [18:24:28]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
173s run-unit-test        PASS
173s autopkgtest [18:24:28]: test pkg-r-autopkgtest: preparing testbed
173s Reading package lists...
173s Building dependency tree...
173s Reading state information...
173s Starting pkgProblemResolver with broken count: 0
173s Starting 2 pkgProblemResolver with broken count: 0
173s Done
174s The following NEW packages will be installed:
174s   build-essential cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu
174s   dctrl-tools g++ g++-14 g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14
174s   gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-14
174s   gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools libasan8
174s   libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev
174s   libgfortran-14-dev libicu-dev libisl23 libitm1 libjpeg-dev
174s   libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblzma-dev libmpc3
174s   libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
174s   libpkgconf3 libpng-dev libreadline-dev libstdc++-14-dev libtirpc-dev
174s   libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev zlib1g-dev
174s 0 upgraded, 51 newly installed, 0 to remove and 0 not upgraded.
174s Need to get 82.3 MB of archives.
174s After this operation, 279 MB of additional disk space will be used.
174s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libisl23 s390x 0.27-1 [704 kB]
174s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB]
174s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [9572 kB]
176s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14 s390x 14.2.0-17ubuntu3 [1028 B]
176s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [5556 B]
176s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x cpp s390x 4:14.2.0-1ubuntu1 [22.4 kB]
176s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libcc1-0 s390x 15-20250222-0ubuntu1 [49.2 kB]
176s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libitm1 s390x 15-20250222-0ubuntu1 [31.2 kB]
176s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libasan8 s390x 15-20250222-0ubuntu1 [2970 kB]
176s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libubsan1 s390x 15-20250222-0ubuntu1 [1212 kB]
176s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-14-dev s390x 14.2.0-17ubuntu3 [1037 kB]
176s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [18.7 MB]
179s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14 s390x 14.2.0-17ubuntu3 [526 kB]
179s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1204 B]
179s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x gcc s390x 4:14.2.0-1ubuntu1 [5004 B]
179s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++-14-dev s390x 14.2.0-17ubuntu3 [2611 kB]
179s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [11.0 MB]
180s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14 s390x 14.2.0-17ubuntu3 [21.8 kB]
180s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x g++-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [956 B]
180s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x g++ s390x 4:14.2.0-1ubuntu1 [1080 B]
180s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x build-essential s390x 12.10ubuntu1 [4930 B]
180s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x dctrl-tools s390x 2.24-3build3 [106 kB]
180s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran-14-dev s390x 14.2.0-17ubuntu3 [654 kB]
180s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [10.3 MB]
181s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14 s390x 14.2.0-17ubuntu3 [13.6 kB]
181s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1012 B]
181s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran s390x 4:14.2.0-1ubuntu1 [1160 B]
181s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x icu-devtools s390x 76.1-1ubuntu2 [225 kB]
181s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x libblas-dev s390x 3.12.1-2 [254 kB]
181s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libbz2-dev s390x 1.0.8-6 [39.1 kB]
181s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate-dev s390x 1.23-1 [52.2 kB]
181s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libicu-dev s390x 76.1-1ubuntu2 [12.2 MB]
182s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8-dev s390x 2.1.5-3ubuntu2 [281 kB]
182s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B]
182s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B]
182s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack-dev s390x 3.12.1-2 [5967 kB]
182s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libncurses-dev s390x 6.5+20250216-2 [407 kB]
182s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-16-0 s390x 10.45-1 [259 kB]
182s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-32-0 s390x 10.45-1 [245 kB]
182s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-posix3 s390x 10.45-1 [7080 B]
182s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-dev s390x 10.45-1 [899 kB]
182s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libpkgconf3 s390x 1.8.1-4 [31.2 kB]
182s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB]
182s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x libpng-dev s390x 1.6.47-1 [278 kB]
182s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libreadline-dev s390x 8.2-6 [187 kB]
182s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x liblzma-dev s390x 5.6.4-1 [183 kB]
182s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf-bin s390x 1.8.1-4 [21.5 kB]
182s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf s390x 1.8.1-4 [16.7 kB]
182s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x libtirpc-dev s390x 1.3.4+ds-1.3 [196 kB]
182s Get:50 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-dev all 4.4.3-1 [4176 B]
182s Get:51 http://ftpmaster.internal/ubuntu plucky/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
182s Fetched 82.3 MB in 8s (9782 kB/s)
182s Selecting previously unselected package libisl23:s390x.
182s (Reading database ... 
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(Reading database ... 61242 files and directories currently installed.)
182s Preparing to unpack .../00-libisl23_0.27-1_s390x.deb ...
182s Unpacking libisl23:s390x (0.27-1) ...
182s Selecting previously unselected package libmpc3:s390x.
182s Preparing to unpack .../01-libmpc3_1.3.1-1build2_s390x.deb ...
182s Unpacking libmpc3:s390x (1.3.1-1build2) ...
182s Selecting previously unselected package cpp-14-s390x-linux-gnu.
182s Preparing to unpack .../02-cpp-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
182s Unpacking cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
182s Selecting previously unselected package cpp-14.
182s Preparing to unpack .../03-cpp-14_14.2.0-17ubuntu3_s390x.deb ...
182s Unpacking cpp-14 (14.2.0-17ubuntu3) ...
182s Selecting previously unselected package cpp-s390x-linux-gnu.
182s Preparing to unpack .../04-cpp-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
182s Unpacking cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
183s Selecting previously unselected package cpp.
183s Preparing to unpack .../05-cpp_4%3a14.2.0-1ubuntu1_s390x.deb ...
183s Unpacking cpp (4:14.2.0-1ubuntu1) ...
183s Selecting previously unselected package libcc1-0:s390x.
183s Preparing to unpack .../06-libcc1-0_15-20250222-0ubuntu1_s390x.deb ...
183s Unpacking libcc1-0:s390x (15-20250222-0ubuntu1) ...
183s Selecting previously unselected package libitm1:s390x.
183s Preparing to unpack .../07-libitm1_15-20250222-0ubuntu1_s390x.deb ...
183s Unpacking libitm1:s390x (15-20250222-0ubuntu1) ...
183s Selecting previously unselected package libasan8:s390x.
183s Preparing to unpack .../08-libasan8_15-20250222-0ubuntu1_s390x.deb ...
183s Unpacking libasan8:s390x (15-20250222-0ubuntu1) ...
183s Selecting previously unselected package libubsan1:s390x.
183s Preparing to unpack .../09-libubsan1_15-20250222-0ubuntu1_s390x.deb ...
183s Unpacking libubsan1:s390x (15-20250222-0ubuntu1) ...
183s Selecting previously unselected package libgcc-14-dev:s390x.
183s Preparing to unpack .../10-libgcc-14-dev_14.2.0-17ubuntu3_s390x.deb ...
183s Unpacking libgcc-14-dev:s390x (14.2.0-17ubuntu3) ...
183s Selecting previously unselected package gcc-14-s390x-linux-gnu.
183s Preparing to unpack .../11-gcc-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
183s Unpacking gcc-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
183s Selecting previously unselected package gcc-14.
183s Preparing to unpack .../12-gcc-14_14.2.0-17ubuntu3_s390x.deb ...
183s Unpacking gcc-14 (14.2.0-17ubuntu3) ...
183s Selecting previously unselected package gcc-s390x-linux-gnu.
183s Preparing to unpack .../13-gcc-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
183s Unpacking gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
183s Selecting previously unselected package gcc.
183s Preparing to unpack .../14-gcc_4%3a14.2.0-1ubuntu1_s390x.deb ...
183s Unpacking gcc (4:14.2.0-1ubuntu1) ...
183s Selecting previously unselected package libstdc++-14-dev:s390x.
183s Preparing to unpack .../15-libstdc++-14-dev_14.2.0-17ubuntu3_s390x.deb ...
183s Unpacking libstdc++-14-dev:s390x (14.2.0-17ubuntu3) ...
183s Selecting previously unselected package g++-14-s390x-linux-gnu.
183s Preparing to unpack .../16-g++-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
183s Unpacking g++-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
183s Selecting previously unselected package g++-14.
183s Preparing to unpack .../17-g++-14_14.2.0-17ubuntu3_s390x.deb ...
183s Unpacking g++-14 (14.2.0-17ubuntu3) ...
183s Selecting previously unselected package g++-s390x-linux-gnu.
183s Preparing to unpack .../18-g++-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
183s Unpacking g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
183s Selecting previously unselected package g++.
183s Preparing to unpack .../19-g++_4%3a14.2.0-1ubuntu1_s390x.deb ...
183s Unpacking g++ (4:14.2.0-1ubuntu1) ...
183s Selecting previously unselected package build-essential.
183s Preparing to unpack .../20-build-essential_12.10ubuntu1_s390x.deb ...
183s Unpacking build-essential (12.10ubuntu1) ...
183s Selecting previously unselected package dctrl-tools.
183s Preparing to unpack .../21-dctrl-tools_2.24-3build3_s390x.deb ...
183s Unpacking dctrl-tools (2.24-3build3) ...
183s Selecting previously unselected package libgfortran-14-dev:s390x.
183s Preparing to unpack .../22-libgfortran-14-dev_14.2.0-17ubuntu3_s390x.deb ...
183s Unpacking libgfortran-14-dev:s390x (14.2.0-17ubuntu3) ...
183s Selecting previously unselected package gfortran-14-s390x-linux-gnu.
183s Preparing to unpack .../23-gfortran-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
183s Unpacking gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
183s Selecting previously unselected package gfortran-14.
183s Preparing to unpack .../24-gfortran-14_14.2.0-17ubuntu3_s390x.deb ...
183s Unpacking gfortran-14 (14.2.0-17ubuntu3) ...
183s Selecting previously unselected package gfortran-s390x-linux-gnu.
183s Preparing to unpack .../25-gfortran-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
183s Unpacking gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
183s Selecting previously unselected package gfortran.
183s Preparing to unpack .../26-gfortran_4%3a14.2.0-1ubuntu1_s390x.deb ...
183s Unpacking gfortran (4:14.2.0-1ubuntu1) ...
183s Selecting previously unselected package icu-devtools.
183s Preparing to unpack .../27-icu-devtools_76.1-1ubuntu2_s390x.deb ...
183s Unpacking icu-devtools (76.1-1ubuntu2) ...
183s Selecting previously unselected package libblas-dev:s390x.
183s Preparing to unpack .../28-libblas-dev_3.12.1-2_s390x.deb ...
183s Unpacking libblas-dev:s390x (3.12.1-2) ...
183s Selecting previously unselected package libbz2-dev:s390x.
183s Preparing to unpack .../29-libbz2-dev_1.0.8-6_s390x.deb ...
183s Unpacking libbz2-dev:s390x (1.0.8-6) ...
183s Selecting previously unselected package libdeflate-dev:s390x.
183s Preparing to unpack .../30-libdeflate-dev_1.23-1_s390x.deb ...
183s Unpacking libdeflate-dev:s390x (1.23-1) ...
183s Selecting previously unselected package libicu-dev:s390x.
183s Preparing to unpack .../31-libicu-dev_76.1-1ubuntu2_s390x.deb ...
183s Unpacking libicu-dev:s390x (76.1-1ubuntu2) ...
184s Selecting previously unselected package libjpeg-turbo8-dev:s390x.
184s Preparing to unpack .../32-libjpeg-turbo8-dev_2.1.5-3ubuntu2_s390x.deb ...
184s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ...
184s Selecting previously unselected package libjpeg8-dev:s390x.
184s Preparing to unpack .../33-libjpeg8-dev_8c-2ubuntu11_s390x.deb ...
184s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ...
184s Selecting previously unselected package libjpeg-dev:s390x.
184s Preparing to unpack .../34-libjpeg-dev_8c-2ubuntu11_s390x.deb ...
184s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ...
184s Selecting previously unselected package liblapack-dev:s390x.
184s Preparing to unpack .../35-liblapack-dev_3.12.1-2_s390x.deb ...
184s Unpacking liblapack-dev:s390x (3.12.1-2) ...
184s Selecting previously unselected package libncurses-dev:s390x.
184s Preparing to unpack .../36-libncurses-dev_6.5+20250216-2_s390x.deb ...
184s Unpacking libncurses-dev:s390x (6.5+20250216-2) ...
184s Selecting previously unselected package libpcre2-16-0:s390x.
184s Preparing to unpack .../37-libpcre2-16-0_10.45-1_s390x.deb ...
184s Unpacking libpcre2-16-0:s390x (10.45-1) ...
184s Selecting previously unselected package libpcre2-32-0:s390x.
184s Preparing to unpack .../38-libpcre2-32-0_10.45-1_s390x.deb ...
184s Unpacking libpcre2-32-0:s390x (10.45-1) ...
184s Selecting previously unselected package libpcre2-posix3:s390x.
184s Preparing to unpack .../39-libpcre2-posix3_10.45-1_s390x.deb ...
184s Unpacking libpcre2-posix3:s390x (10.45-1) ...
184s Selecting previously unselected package libpcre2-dev:s390x.
184s Preparing to unpack .../40-libpcre2-dev_10.45-1_s390x.deb ...
184s Unpacking libpcre2-dev:s390x (10.45-1) ...
184s Selecting previously unselected package libpkgconf3:s390x.
184s Preparing to unpack .../41-libpkgconf3_1.8.1-4_s390x.deb ...
184s Unpacking libpkgconf3:s390x (1.8.1-4) ...
184s Selecting previously unselected package zlib1g-dev:s390x.
184s Preparing to unpack .../42-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_s390x.deb ...
184s Unpacking zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
184s Selecting previously unselected package libpng-dev:s390x.
184s Preparing to unpack .../43-libpng-dev_1.6.47-1_s390x.deb ...
184s Unpacking libpng-dev:s390x (1.6.47-1) ...
184s Selecting previously unselected package libreadline-dev:s390x.
184s Preparing to unpack .../44-libreadline-dev_8.2-6_s390x.deb ...
184s Unpacking libreadline-dev:s390x (8.2-6) ...
184s Selecting previously unselected package liblzma-dev:s390x.
184s Preparing to unpack .../45-liblzma-dev_5.6.4-1_s390x.deb ...
184s Unpacking liblzma-dev:s390x (5.6.4-1) ...
184s Selecting previously unselected package pkgconf-bin.
184s Preparing to unpack .../46-pkgconf-bin_1.8.1-4_s390x.deb ...
184s Unpacking pkgconf-bin (1.8.1-4) ...
184s Selecting previously unselected package pkgconf:s390x.
184s Preparing to unpack .../47-pkgconf_1.8.1-4_s390x.deb ...
184s Unpacking pkgconf:s390x (1.8.1-4) ...
184s Selecting previously unselected package libtirpc-dev:s390x.
184s Preparing to unpack .../48-libtirpc-dev_1.3.4+ds-1.3_s390x.deb ...
184s Unpacking libtirpc-dev:s390x (1.3.4+ds-1.3) ...
184s Selecting previously unselected package r-base-dev.
184s Preparing to unpack .../49-r-base-dev_4.4.3-1_all.deb ...
184s Unpacking r-base-dev (4.4.3-1) ...
184s Selecting previously unselected package pkg-r-autopkgtest.
184s Preparing to unpack .../50-pkg-r-autopkgtest_20231212ubuntu1_all.deb ...
184s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ...
184s Setting up libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ...
184s Setting up libncurses-dev:s390x (6.5+20250216-2) ...
184s Setting up libreadline-dev:s390x (8.2-6) ...
184s Setting up libpcre2-16-0:s390x (10.45-1) ...
184s Setting up libpcre2-32-0:s390x (10.45-1) ...
184s Setting up libtirpc-dev:s390x (1.3.4+ds-1.3) ...
184s Setting up libpkgconf3:s390x (1.8.1-4) ...
184s Setting up libmpc3:s390x (1.3.1-1build2) ...
184s Setting up icu-devtools (76.1-1ubuntu2) ...
184s Setting up pkgconf-bin (1.8.1-4) ...
184s Setting up liblzma-dev:s390x (5.6.4-1) ...
184s Setting up libubsan1:s390x (15-20250222-0ubuntu1) ...
184s Setting up zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
184s Setting up libpcre2-posix3:s390x (10.45-1) ...
184s Setting up libasan8:s390x (15-20250222-0ubuntu1) ...
184s Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ...
184s Setting up libisl23:s390x (0.27-1) ...
184s Setting up libdeflate-dev:s390x (1.23-1) ...
184s Setting up libicu-dev:s390x (76.1-1ubuntu2) ...
184s Setting up libcc1-0:s390x (15-20250222-0ubuntu1) ...
184s Setting up libblas-dev:s390x (3.12.1-2) ...
184s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so to provide /usr/lib/s390x-linux-gnu/libblas.so (libblas.so-s390x-linux-gnu) in auto mode
184s Setting up dctrl-tools (2.24-3build3) ...
184s Setting up libitm1:s390x (15-20250222-0ubuntu1) ...
184s Setting up libbz2-dev:s390x (1.0.8-6) ...
184s Setting up libpcre2-dev:s390x (10.45-1) ...
184s Setting up libpng-dev:s390x (1.6.47-1) ...
184s Setting up libjpeg-dev:s390x (8c-2ubuntu11) ...
184s Setting up pkgconf:s390x (1.8.1-4) ...
184s Setting up liblapack-dev:s390x (3.12.1-2) ...
184s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode
184s Setting up cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
184s Setting up cpp-14 (14.2.0-17ubuntu3) ...
184s Setting up libgcc-14-dev:s390x (14.2.0-17ubuntu3) ...
184s Setting up libstdc++-14-dev:s390x (14.2.0-17ubuntu3) ...
184s Setting up libgfortran-14-dev:s390x (14.2.0-17ubuntu3) ...
184s Setting up cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
184s Setting up gcc-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
184s Setting up gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
184s Setting up g++-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
184s Setting up cpp (4:14.2.0-1ubuntu1) ...
184s Setting up gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
184s Setting up g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
184s Setting up gcc-14 (14.2.0-17ubuntu3) ...
184s Setting up g++-14 (14.2.0-17ubuntu3) ...
184s Setting up gfortran-14 (14.2.0-17ubuntu3) ...
184s Setting up gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
184s Setting up gcc (4:14.2.0-1ubuntu1) ...
184s Setting up g++ (4:14.2.0-1ubuntu1) ...
184s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
184s Setting up build-essential (12.10ubuntu1) ...
184s Setting up gfortran (4:14.2.0-1ubuntu1) ...
184s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
184s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
184s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
184s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
184s Setting up r-base-dev (4.4.3-1) ...
184s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
184s Processing triggers for libc-bin (2.41-1ubuntu2) ...
184s Processing triggers for man-db (2.13.0-1) ...
185s Processing triggers for install-info (7.1.1-1) ...
186s autopkgtest [18:24:41]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
186s autopkgtest [18:24:41]: test pkg-r-autopkgtest: [-----------------------
186s Test: Try to load the R library RANN
186s 
186s R version 4.4.3 (2025-02-28) -- "Trophy Case"
186s Copyright (C) 2025 The R Foundation for Statistical Computing
186s Platform: s390x-ibm-linux-gnu
186s 
186s R is free software and comes with ABSOLUTELY NO WARRANTY.
186s You are welcome to redistribute it under certain conditions.
186s Type 'license()' or 'licence()' for distribution details.
186s 
186s R is a collaborative project with many contributors.
186s Type 'contributors()' for more information and
186s 'citation()' on how to cite R or R packages in publications.
186s 
186s Type 'demo()' for some demos, 'help()' for on-line help, or
186s 'help.start()' for an HTML browser interface to help.
186s Type 'q()' to quit R.
186s 
186s > library('RANN')
186s > 
186s > 
186s Other tests are currently unsupported!
186s They will be progressively added.
186s autopkgtest [18:24:41]: test pkg-r-autopkgtest: -----------------------]
187s autopkgtest [18:24:42]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
187s pkg-r-autopkgtest    PASS
187s autopkgtest [18:24:42]: @@@@@@@@@@@@@@@@@@@@ summary
187s run-unit-test        PASS
187s pkg-r-autopkgtest    PASS
207s nova [W] Using flock in prodstack6-s390x
207s Creating nova instance adt-plucky-s390x-r-cran-rann-20250315-182135-juju-7f2275-prod-proposed-migration-environment-2-e0108ca0-a43d-4d6c-9f5e-941d605f34bf from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)...
207s nova [W] Timed out waiting for cf144a39-5c0c-48ad-8d09-b3f775383a6f to get deleted.