0s autopkgtest [22:32:47]: starting date and time: 2024-11-01 22:32:47+0000 0s autopkgtest [22:32:47]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [22:32:47]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.lw789_tj/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:rmpi,src:openmpi --apt-upgrade r-cran-pls --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 '--env=ADT_TEST_TRIGGERS=rmpi/0.7-2.1-2 openmpi/5.0.5-3' -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-s390x-14.secgroup --name adt-plucky-s390x-r-cran-pls-20241101-223247-juju-7f2275-prod-proposed-migration-environment-15-fe2cb0b9-0c8d-4ac0-bbf7-460cb5808cd1 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 104s autopkgtest [22:34:31]: testbed dpkg architecture: s390x 104s autopkgtest [22:34:31]: testbed apt version: 2.9.8 104s autopkgtest [22:34:31]: @@@@@@@@@@@@@@@@@@@@ test bed setup 105s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 105s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [41.0 kB] 105s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [176 kB] 105s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [2639 kB] 106s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 106s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [213 kB] 106s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [1863 kB] 106s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [33.3 kB] 106s Fetched 5045 kB in 1s (4257 kB/s) 106s Reading package lists... 108s Reading package lists... 108s Building dependency tree... 108s Reading state information... 108s Calculating upgrade... 108s The following packages will be upgraded: 108s libblockdev-crypto3 libblockdev-fs3 libblockdev-loop3 libblockdev-mdraid3 108s libblockdev-nvme3 libblockdev-part3 libblockdev-swap3 libblockdev-utils3 108s libblockdev3 libevdev2 libftdi1-2 libinih1 libpipeline1 nano 108s python3-lazr.uri 109s 15 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 109s Need to get 611 kB of archives. 109s After this operation, 52.2 kB of additional disk space will be used. 109s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libevdev2 s390x 1.13.3+dfsg-1 [35.9 kB] 109s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libpipeline1 s390x 1.5.8-1 [32.5 kB] 109s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x nano s390x 8.2-1 [298 kB] 109s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x libblockdev-utils3 s390x 3.2.0-2 [19.3 kB] 109s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libblockdev-crypto3 s390x 3.2.0-2 [23.7 kB] 109s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x libblockdev-fs3 s390x 3.2.0-2 [36.1 kB] 109s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libblockdev-loop3 s390x 3.2.0-2 [7092 B] 109s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libblockdev-mdraid3 s390x 3.2.0-2 [12.8 kB] 109s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libblockdev-nvme3 s390x 3.2.0-2 [18.1 kB] 109s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libblockdev-part3 s390x 3.2.0-2 [15.3 kB] 109s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libblockdev-swap3 s390x 3.2.0-2 [7704 B] 109s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libblockdev3 s390x 3.2.0-2 [53.8 kB] 109s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x libftdi1-2 s390x 1.5-7 [29.2 kB] 109s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x libinih1 s390x 58-1ubuntu1 [7602 B] 109s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x python3-lazr.uri all 1.0.6-4 [13.6 kB] 109s Fetched 611 kB in 1s (1079 kB/s) 109s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55483 files and directories currently installed.) 109s Preparing to unpack .../00-libevdev2_1.13.3+dfsg-1_s390x.deb ... 109s Unpacking libevdev2:s390x (1.13.3+dfsg-1) over (1.13.2+dfsg-1) ... 109s Preparing to unpack .../01-libpipeline1_1.5.8-1_s390x.deb ... 109s Unpacking libpipeline1:s390x (1.5.8-1) over (1.5.7-2) ... 109s Preparing to unpack .../02-nano_8.2-1_s390x.deb ... 109s Unpacking nano (8.2-1) over (8.1-1) ... 109s Preparing to unpack .../03-libblockdev-utils3_3.2.0-2_s390x.deb ... 109s Unpacking libblockdev-utils3:s390x (3.2.0-2) over (3.1.1-2) ... 109s Preparing to unpack .../04-libblockdev-crypto3_3.2.0-2_s390x.deb ... 109s Unpacking libblockdev-crypto3:s390x (3.2.0-2) over (3.1.1-2) ... 109s Preparing to unpack .../05-libblockdev-fs3_3.2.0-2_s390x.deb ... 109s Unpacking libblockdev-fs3:s390x (3.2.0-2) over (3.1.1-2) ... 109s Preparing to unpack .../06-libblockdev-loop3_3.2.0-2_s390x.deb ... 109s Unpacking libblockdev-loop3:s390x (3.2.0-2) over (3.1.1-2) ... 109s Preparing to unpack .../07-libblockdev-mdraid3_3.2.0-2_s390x.deb ... 109s Unpacking libblockdev-mdraid3:s390x (3.2.0-2) over (3.1.1-2) ... 109s Preparing to unpack .../08-libblockdev-nvme3_3.2.0-2_s390x.deb ... 109s Unpacking libblockdev-nvme3:s390x (3.2.0-2) over (3.1.1-2) ... 109s Preparing to unpack .../09-libblockdev-part3_3.2.0-2_s390x.deb ... 109s Unpacking libblockdev-part3:s390x (3.2.0-2) over (3.1.1-2) ... 109s Preparing to unpack .../10-libblockdev-swap3_3.2.0-2_s390x.deb ... 109s Unpacking libblockdev-swap3:s390x (3.2.0-2) over (3.1.1-2) ... 109s Preparing to unpack .../11-libblockdev3_3.2.0-2_s390x.deb ... 109s Unpacking libblockdev3:s390x (3.2.0-2) over (3.1.1-2) ... 109s Preparing to unpack .../12-libftdi1-2_1.5-7_s390x.deb ... 109s Unpacking libftdi1-2:s390x (1.5-7) over (1.5-6build5) ... 109s Preparing to unpack .../13-libinih1_58-1ubuntu1_s390x.deb ... 109s Unpacking libinih1:s390x (58-1ubuntu1) over (55-1ubuntu2) ... 109s Preparing to unpack .../14-python3-lazr.uri_1.0.6-4_all.deb ... 110s Unpacking python3-lazr.uri (1.0.6-4) over (1.0.6-3) ... 110s Setting up libpipeline1:s390x (1.5.8-1) ... 110s Setting up libinih1:s390x (58-1ubuntu1) ... 110s Setting up python3-lazr.uri (1.0.6-4) ... 110s Setting up libftdi1-2:s390x (1.5-7) ... 110s Setting up libblockdev-utils3:s390x (3.2.0-2) ... 110s Setting up libblockdev-nvme3:s390x (3.2.0-2) ... 110s Setting up nano (8.2-1) ... 110s Setting up libblockdev-fs3:s390x (3.2.0-2) ... 110s Setting up libevdev2:s390x (1.13.3+dfsg-1) ... 110s Setting up libblockdev-mdraid3:s390x (3.2.0-2) ... 110s Setting up libblockdev-crypto3:s390x (3.2.0-2) ... 110s Setting up libblockdev-swap3:s390x (3.2.0-2) ... 110s Setting up libblockdev-loop3:s390x (3.2.0-2) ... 110s Setting up libblockdev3:s390x (3.2.0-2) ... 110s Installing new version of config file /etc/libblockdev/3/conf.d/00-default.cfg ... 110s Setting up libblockdev-part3:s390x (3.2.0-2) ... 110s Processing triggers for libc-bin (2.40-1ubuntu3) ... 110s Processing triggers for man-db (2.12.1-3) ... 110s Processing triggers for install-info (7.1.1-1) ... 110s Reading package lists... 110s Building dependency tree... 110s Reading state information... 111s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 111s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 111s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 111s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 111s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 112s Reading package lists... 112s Reading package lists... 112s Building dependency tree... 112s Reading state information... 112s Calculating upgrade... 112s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 112s Reading package lists... 112s Building dependency tree... 112s Reading state information... 112s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 115s autopkgtest [22:34:42]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP Mon Sep 16 12:49:35 UTC 2024 115s autopkgtest [22:34:42]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-pls 117s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-pls 2.8-3-1 (dsc) [2097 B] 117s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-pls 2.8-3-1 (tar) [4365 kB] 117s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-pls 2.8-3-1 (diff) [2628 B] 117s gpgv: Signature made Thu Nov 23 08:20:11 2023 UTC 117s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 117s gpgv: issuer "tille@debian.org" 117s gpgv: Can't check signature: No public key 117s dpkg-source: warning: cannot verify inline signature for ./r-cran-pls_2.8-3-1.dsc: no acceptable signature found 117s autopkgtest [22:34:44]: testing package r-cran-pls version 2.8-3-1 118s autopkgtest [22:34:45]: build not needed 119s autopkgtest [22:34:46]: test run-unit-test: preparing testbed 122s Reading package lists... 122s Building dependency tree... 122s Reading state information... 122s Starting pkgProblemResolver with broken count: 0 122s Starting 2 pkgProblemResolver with broken count: 0 122s Done 122s The following additional packages will be installed: 122s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3 122s libcairo2 libdatrie1 libdeflate0 libevent-pthreads-2.1-7t64 libfabric1 122s libfontconfig1 libfreetype6 libgfortran5 libgomp1 libgraphite2-3 122s libharfbuzz0b libhwloc-plugins libhwloc15 libice6 libjbig0 libjpeg-turbo8 122s libjpeg8 liblapack3 libmunge2 libopenmpi3t64 libpango-1.0-0 122s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpciaccess0 122s libpixman-1-0 libpmix2t64 librdmacm1t64 libsharpyuv0 libsm6 libtcl8.6 122s libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0 122s libxft2 libxnvctrl0 libxrender1 libxss1 libxt6t64 mpi-default-bin 122s ocl-icd-libopencl1 openmpi-bin openmpi-common r-base-core r-cran-brio 122s r-cran-callr r-cran-cli r-cran-crayon r-cran-desc r-cran-diffobj 122s r-cran-digest r-cran-evaluate r-cran-fansi r-cran-fs r-cran-glue 122s r-cran-jsonlite r-cran-lifecycle r-cran-magrittr r-cran-mass r-cran-pillar 122s r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgload r-cran-pls r-cran-praise 122s r-cran-processx r-cran-ps r-cran-r6 r-cran-rematch2 r-cran-rlang r-cran-rmpi 122s r-cran-rprojroot r-cran-runit r-cran-testthat r-cran-tibble r-cran-utf8 122s r-cran-vctrs r-cran-waldo r-cran-withr unzip x11-common xdg-utils zip 122s Suggested packages: 122s tcl8.6 tk8.6 opencl-icd gfortran | fortran-compiler elpa-ess r-doc-info 122s | r-doc-pdf r-mathlib r-base-html r-cran-rstudioapi r-cran-knitr 122s r-cran-rmarkdown r-cran-covr r-cran-bit64 r-cran-dbi r-cran-dplyr 122s r-cran-formattable r-cran-ggplot2 r-cran-nanotime r-cran-palmerpenguins 122s r-cran-scales r-cran-stringi r-cran-survival r-cran-units r-cran-vdiffr 122s r-cran-bench r-cran-blob r-cran-here r-cran-hms r-cran-htmltools 122s r-cran-purrr r-cran-tidyr 122s Recommended packages: 122s r-recommended r-base-dev r-doc-html r-cran-covr r-cran-mockery 122s r-cran-spelling r-cran-htmltools r-cran-htmlwidgets r-cran-knitr 122s r-cran-rmarkdown r-cran-rstudioapi r-cran-whoami r-cran-gh r-cran-ggplot2 122s r-cran-lattice r-cran-unitizer r-cran-dbi r-cran-dplyr r-cran-rsqlite 122s r-cran-httr r-cran-r.rsp r-cran-sf r-cran-lintr r-cran-tidyverse 122s r-cran-lubridate r-cran-cpp11 r-cran-rcpp r-cran-bitops r-cran-mathjaxr 122s r-cran-remotes r-cran-usethis r-cran-codetools r-cran-curl r-cran-webfakes 122s r-cran-pingr r-cran-mockr r-cran-shiny r-cran-xml2 r-cran-data.table 122s r-cran-formattable r-cran-bit64 r-cran-generics r-cran-pkgdown 122s r-cran-zeallot libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl 122s x11-utils x11-xserver-utils 122s The following NEW packages will be installed: 122s autopkgtest-satdep fontconfig fontconfig-config fonts-dejavu-core 122s fonts-dejavu-mono libblas3 libcairo2 libdatrie1 libdeflate0 122s libevent-pthreads-2.1-7t64 libfabric1 libfontconfig1 libfreetype6 122s libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libhwloc-plugins 122s libhwloc15 libice6 libjbig0 libjpeg-turbo8 libjpeg8 liblapack3 libmunge2 122s libopenmpi3t64 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 122s libpaper-utils libpaper1 libpciaccess0 libpixman-1-0 libpmix2t64 122s librdmacm1t64 libsharpyuv0 libsm6 libtcl8.6 libthai-data libthai0 libtiff6 122s libtk8.6 libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxnvctrl0 libxrender1 122s libxss1 libxt6t64 mpi-default-bin ocl-icd-libopencl1 openmpi-bin 122s openmpi-common r-base-core r-cran-brio r-cran-callr r-cran-cli r-cran-crayon 122s r-cran-desc r-cran-diffobj r-cran-digest r-cran-evaluate r-cran-fansi 122s r-cran-fs r-cran-glue r-cran-jsonlite r-cran-lifecycle r-cran-magrittr 122s r-cran-mass r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgload 122s r-cran-pls r-cran-praise r-cran-processx r-cran-ps r-cran-r6 r-cran-rematch2 122s r-cran-rlang r-cran-rmpi r-cran-rprojroot r-cran-runit r-cran-testthat 122s r-cran-tibble r-cran-utf8 r-cran-vctrs r-cran-waldo r-cran-withr unzip 122s x11-common xdg-utils zip 122s 0 upgraded, 94 newly installed, 0 to remove and 0 not upgraded. 122s Need to get 63.6 MB/63.6 MB of archives. 122s After this operation, 124 MB of additional disk space will be used. 122s Get:1 /tmp/autopkgtest.Tw1yv5/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [732 B] 122s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB] 123s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 123s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 123s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-1.1ubuntu2 [37.4 kB] 123s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-1.1ubuntu2 [150 kB] 123s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig s390x 2.15.0-1.1ubuntu2 [191 kB] 123s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.0-3build2 [238 kB] 123s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.42.2-1build1 [206 kB] 123s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB] 123s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B] 123s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB] 123s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB] 123s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB] 123s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.21-1 [46.1 kB] 123s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libevent-pthreads-2.1-7t64 s390x 2.1.12-stable-10 [7870 B] 123s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x librdmacm1t64 s390x 52.0-2ubuntu1 [73.8 kB] 123s Get:18 http://ftpmaster.internal/ubuntu plucky/universe s390x libfabric1 s390x 1.17.0-3ubuntu1 [558 kB] 123s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 14.2.0-7ubuntu1 [587 kB] 123s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 14.2.0-7ubuntu1 [151 kB] 123s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB] 123s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 9.0.0-1 [533 kB] 123s Get:23 http://ftpmaster.internal/ubuntu plucky/universe s390x libhwloc15 s390x 2.11.0-2 [175 kB] 123s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB] 123s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x libice6 s390x 2:1.0.10-1build3 [44.8 kB] 123s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu2 [150 kB] 123s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 123s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.0-3build2 [2953 kB] 123s Get:29 http://ftpmaster.internal/ubuntu plucky/universe s390x libmunge2 s390x 0.5.15-4build1 [15.6 kB] 123s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libpciaccess0 s390x 0.17-3build1 [19.0 kB] 123s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libxnvctrl0 s390x 510.47.03-0ubuntu4 [12.7 kB] 123s Get:32 http://ftpmaster.internal/ubuntu plucky/universe s390x ocl-icd-libopencl1 s390x 2.3.2-1build1 [41.1 kB] 123s Get:33 http://ftpmaster.internal/ubuntu plucky/universe s390x libhwloc-plugins s390x 2.11.0-2 [16.1 kB] 123s Get:34 http://ftpmaster.internal/ubuntu plucky/universe s390x libpmix2t64 s390x 5.0.3-2 [718 kB] 123s Get:35 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x libopenmpi3t64 s390x 5.0.5-3 [2102 kB] 123s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x libthai-data all 0.1.29-2build1 [158 kB] 123s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB] 123s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libpango-1.0-0 s390x 1.54.0+ds-2 [247 kB] 123s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libpangoft2-1.0-0 s390x 1.54.0+ds-2 [49.3 kB] 123s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libpangocairo-1.0-0 s390x 1.54.0+ds-2 [28.0 kB] 123s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper1 s390x 1.1.29build1 [13.4 kB] 123s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper-utils s390x 1.1.29build1 [8442 B] 123s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.4.0-0.1 [16.2 kB] 123s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x libsm6 s390x 2:1.2.3-1build3 [17.7 kB] 123s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.14+dfsg-1build1 [1038 kB] 123s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB] 123s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.4.0-0.1 [204 kB] 123s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB] 123s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB] 123s Get:50 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B] 123s Get:51 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.14-1build1 [833 kB] 124s Get:52 http://ftpmaster.internal/ubuntu plucky/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB] 124s Get:53 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x openmpi-common all 5.0.5-3 [95.6 kB] 124s Get:54 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x openmpi-bin s390x 5.0.5-3 [155 kB] 124s Get:55 http://ftpmaster.internal/ubuntu plucky/main s390x zip s390x 3.0-14 [187 kB] 124s Get:56 http://ftpmaster.internal/ubuntu plucky/main s390x unzip s390x 6.0-28ubuntu6 [186 kB] 124s Get:57 http://ftpmaster.internal/ubuntu plucky/main s390x xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 124s Get:58 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-core s390x 4.4.1-1 [28.6 MB] 125s Get:59 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-brio s390x 1.1.5-1 [38.6 kB] 125s Get:60 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ps s390x 1.7.6-1 [313 kB] 125s Get:61 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r6 all 2.5.1-1 [99.0 kB] 125s Get:62 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-processx s390x 3.8.4-1 [353 kB] 125s Get:63 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-callr all 3.7.6-1 [458 kB] 125s Get:64 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cli s390x 3.6.2-1 [1382 kB] 125s Get:65 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-crayon all 1.5.2-1 [164 kB] 125s Get:66 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-desc all 1.4.3-1 [359 kB] 125s Get:67 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-diffobj s390x 0.3.5-1 [1115 kB] 125s Get:68 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-digest s390x 0.6.36-1 [204 kB] 125s Get:69 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-evaluate all 0.24.0-1 [93.5 kB] 125s Get:70 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fansi s390x 1.0.5-1 [615 kB] 125s Get:71 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fs s390x 1.6.4+dfsg-1 [245 kB] 125s Get:72 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-glue s390x 1.7.0-1 [154 kB] 125s Get:73 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-jsonlite s390x 1.8.8+dfsg-1 [444 kB] 125s Get:74 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rlang s390x 1.1.4-1 [1715 kB] 125s Get:75 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 125s Get:76 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB] 125s Get:77 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mass s390x 7.3-61-1 [1112 kB] 125s Get:78 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB] 125s Get:79 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB] 125s Get:80 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 125s Get:81 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgbuild all 1.4.4-1 [212 kB] 125s Get:82 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 125s Get:83 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rprojroot all 2.0.4-1 [124 kB] 125s Get:84 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-withr all 3.0.0+dfsg-1 [228 kB] 125s Get:85 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgload all 1.4.0-1 [247 kB] 125s Get:86 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pls all 2.8-3-1 [4755 kB] 125s Get:87 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-praise all 1.0.0-4build1 [20.3 kB] 125s Get:88 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tibble s390x 3.2.1+dfsg-2 [415 kB] 125s Get:89 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 125s Get:90 http://ftpmaster.internal/ubuntu plucky/universe s390x mpi-default-bin s390x 1.17 [2296 B] 125s Get:91 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x r-cran-rmpi s390x 0.7-2.1-2 [274 kB] 125s Get:92 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-runit all 0.4.33-1 [377 kB] 125s Get:93 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-waldo all 0.5.2-1build1 [120 kB] 125s Get:94 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-testthat s390x 3.2.1.1-1 [1638 kB] 125s Preconfiguring packages ... 125s Fetched 63.6 MB in 3s (22.2 MB/s) 125s Selecting previously unselected package libfreetype6:s390x. 126s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55483 files and directories currently installed.) 126s Preparing to unpack .../00-libfreetype6_2.13.3+dfsg-1_s390x.deb ... 126s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ... 126s Selecting previously unselected package fonts-dejavu-mono. 126s Preparing to unpack .../01-fonts-dejavu-mono_2.37-8_all.deb ... 126s Unpacking fonts-dejavu-mono (2.37-8) ... 126s Selecting previously unselected package fonts-dejavu-core. 126s Preparing to unpack .../02-fonts-dejavu-core_2.37-8_all.deb ... 126s Unpacking fonts-dejavu-core (2.37-8) ... 126s Selecting previously unselected package fontconfig-config. 126s Preparing to unpack .../03-fontconfig-config_2.15.0-1.1ubuntu2_s390x.deb ... 126s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 126s Selecting previously unselected package libfontconfig1:s390x. 126s Preparing to unpack .../04-libfontconfig1_2.15.0-1.1ubuntu2_s390x.deb ... 126s Unpacking libfontconfig1:s390x (2.15.0-1.1ubuntu2) ... 126s Selecting previously unselected package fontconfig. 126s Preparing to unpack .../05-fontconfig_2.15.0-1.1ubuntu2_s390x.deb ... 126s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 126s Selecting previously unselected package libblas3:s390x. 126s Preparing to unpack .../06-libblas3_3.12.0-3build2_s390x.deb ... 126s Unpacking libblas3:s390x (3.12.0-3build2) ... 126s Selecting previously unselected package libpixman-1-0:s390x. 126s Preparing to unpack .../07-libpixman-1-0_0.42.2-1build1_s390x.deb ... 126s Unpacking libpixman-1-0:s390x (0.42.2-1build1) ... 126s Selecting previously unselected package libxcb-render0:s390x. 126s Preparing to unpack .../08-libxcb-render0_1.17.0-2_s390x.deb ... 126s Unpacking libxcb-render0:s390x (1.17.0-2) ... 126s Selecting previously unselected package libxcb-shm0:s390x. 126s Preparing to unpack .../09-libxcb-shm0_1.17.0-2_s390x.deb ... 126s Unpacking libxcb-shm0:s390x (1.17.0-2) ... 126s Selecting previously unselected package libxrender1:s390x. 126s Preparing to unpack .../10-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ... 126s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ... 126s Selecting previously unselected package libcairo2:s390x. 126s Preparing to unpack .../11-libcairo2_1.18.2-2_s390x.deb ... 126s Unpacking libcairo2:s390x (1.18.2-2) ... 126s Selecting previously unselected package libdatrie1:s390x. 126s Preparing to unpack .../12-libdatrie1_0.2.13-3build1_s390x.deb ... 126s Unpacking libdatrie1:s390x (0.2.13-3build1) ... 126s Selecting previously unselected package libdeflate0:s390x. 126s Preparing to unpack .../13-libdeflate0_1.21-1_s390x.deb ... 126s Unpacking libdeflate0:s390x (1.21-1) ... 126s Selecting previously unselected package libevent-pthreads-2.1-7t64:s390x. 126s Preparing to unpack .../14-libevent-pthreads-2.1-7t64_2.1.12-stable-10_s390x.deb ... 126s Unpacking libevent-pthreads-2.1-7t64:s390x (2.1.12-stable-10) ... 126s Selecting previously unselected package librdmacm1t64:s390x. 126s Preparing to unpack .../15-librdmacm1t64_52.0-2ubuntu1_s390x.deb ... 126s Unpacking librdmacm1t64:s390x (52.0-2ubuntu1) ... 126s Selecting previously unselected package libfabric1:s390x. 126s Preparing to unpack .../16-libfabric1_1.17.0-3ubuntu1_s390x.deb ... 126s Unpacking libfabric1:s390x (1.17.0-3ubuntu1) ... 126s Selecting previously unselected package libgfortran5:s390x. 126s Preparing to unpack .../17-libgfortran5_14.2.0-7ubuntu1_s390x.deb ... 126s Unpacking libgfortran5:s390x (14.2.0-7ubuntu1) ... 126s Selecting previously unselected package libgomp1:s390x. 126s Preparing to unpack .../18-libgomp1_14.2.0-7ubuntu1_s390x.deb ... 126s Unpacking libgomp1:s390x (14.2.0-7ubuntu1) ... 126s Selecting previously unselected package libgraphite2-3:s390x. 126s Preparing to unpack .../19-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ... 126s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 126s Selecting previously unselected package libharfbuzz0b:s390x. 126s Preparing to unpack .../20-libharfbuzz0b_9.0.0-1_s390x.deb ... 126s Unpacking libharfbuzz0b:s390x (9.0.0-1) ... 126s Selecting previously unselected package libhwloc15:s390x. 126s Preparing to unpack .../21-libhwloc15_2.11.0-2_s390x.deb ... 126s Unpacking libhwloc15:s390x (2.11.0-2) ... 126s Selecting previously unselected package x11-common. 126s Preparing to unpack .../22-x11-common_1%3a7.7+23ubuntu3_all.deb ... 126s Unpacking x11-common (1:7.7+23ubuntu3) ... 126s Selecting previously unselected package libice6:s390x. 126s Preparing to unpack .../23-libice6_2%3a1.0.10-1build3_s390x.deb ... 126s Unpacking libice6:s390x (2:1.0.10-1build3) ... 126s Selecting previously unselected package libjpeg-turbo8:s390x. 126s Preparing to unpack .../24-libjpeg-turbo8_2.1.5-2ubuntu2_s390x.deb ... 126s Unpacking libjpeg-turbo8:s390x (2.1.5-2ubuntu2) ... 126s Selecting previously unselected package libjpeg8:s390x. 126s Preparing to unpack .../25-libjpeg8_8c-2ubuntu11_s390x.deb ... 126s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 126s Selecting previously unselected package liblapack3:s390x. 126s Preparing to unpack .../26-liblapack3_3.12.0-3build2_s390x.deb ... 126s Unpacking liblapack3:s390x (3.12.0-3build2) ... 126s Selecting previously unselected package libmunge2:s390x. 126s Preparing to unpack .../27-libmunge2_0.5.15-4build1_s390x.deb ... 126s Unpacking libmunge2:s390x (0.5.15-4build1) ... 126s Selecting previously unselected package libpciaccess0:s390x. 126s Preparing to unpack .../28-libpciaccess0_0.17-3build1_s390x.deb ... 126s Unpacking libpciaccess0:s390x (0.17-3build1) ... 126s Selecting previously unselected package libxnvctrl0:s390x. 126s Preparing to unpack .../29-libxnvctrl0_510.47.03-0ubuntu4_s390x.deb ... 126s Unpacking libxnvctrl0:s390x (510.47.03-0ubuntu4) ... 126s Selecting previously unselected package ocl-icd-libopencl1:s390x. 126s Preparing to unpack .../30-ocl-icd-libopencl1_2.3.2-1build1_s390x.deb ... 126s Unpacking ocl-icd-libopencl1:s390x (2.3.2-1build1) ... 126s Selecting previously unselected package libhwloc-plugins:s390x. 126s Preparing to unpack .../31-libhwloc-plugins_2.11.0-2_s390x.deb ... 126s Unpacking libhwloc-plugins:s390x (2.11.0-2) ... 126s Selecting previously unselected package libpmix2t64:s390x. 126s Preparing to unpack .../32-libpmix2t64_5.0.3-2_s390x.deb ... 126s Unpacking libpmix2t64:s390x (5.0.3-2) ... 126s Selecting previously unselected package libopenmpi3t64:s390x. 126s Preparing to unpack .../33-libopenmpi3t64_5.0.5-3_s390x.deb ... 126s Unpacking libopenmpi3t64:s390x (5.0.5-3) ... 126s Selecting previously unselected package libthai-data. 126s Preparing to unpack .../34-libthai-data_0.1.29-2build1_all.deb ... 126s Unpacking libthai-data (0.1.29-2build1) ... 126s Selecting previously unselected package libthai0:s390x. 126s Preparing to unpack .../35-libthai0_0.1.29-2build1_s390x.deb ... 126s Unpacking libthai0:s390x (0.1.29-2build1) ... 126s Selecting previously unselected package libpango-1.0-0:s390x. 126s Preparing to unpack .../36-libpango-1.0-0_1.54.0+ds-2_s390x.deb ... 126s Unpacking libpango-1.0-0:s390x (1.54.0+ds-2) ... 126s Selecting previously unselected package libpangoft2-1.0-0:s390x. 126s Preparing to unpack .../37-libpangoft2-1.0-0_1.54.0+ds-2_s390x.deb ... 126s Unpacking libpangoft2-1.0-0:s390x (1.54.0+ds-2) ... 126s Selecting previously unselected package libpangocairo-1.0-0:s390x. 126s Preparing to unpack .../38-libpangocairo-1.0-0_1.54.0+ds-2_s390x.deb ... 126s Unpacking libpangocairo-1.0-0:s390x (1.54.0+ds-2) ... 126s Selecting previously unselected package libpaper1:s390x. 126s Preparing to unpack .../39-libpaper1_1.1.29build1_s390x.deb ... 126s Unpacking libpaper1:s390x (1.1.29build1) ... 126s Selecting previously unselected package libpaper-utils. 126s Preparing to unpack .../40-libpaper-utils_1.1.29build1_s390x.deb ... 126s Unpacking libpaper-utils (1.1.29build1) ... 126s Selecting previously unselected package libsharpyuv0:s390x. 126s Preparing to unpack .../41-libsharpyuv0_1.4.0-0.1_s390x.deb ... 126s Unpacking libsharpyuv0:s390x (1.4.0-0.1) ... 126s Selecting previously unselected package libsm6:s390x. 126s Preparing to unpack .../42-libsm6_2%3a1.2.3-1build3_s390x.deb ... 126s Unpacking libsm6:s390x (2:1.2.3-1build3) ... 126s Selecting previously unselected package libtcl8.6:s390x. 126s Preparing to unpack .../43-libtcl8.6_8.6.14+dfsg-1build1_s390x.deb ... 126s Unpacking libtcl8.6:s390x (8.6.14+dfsg-1build1) ... 126s Selecting previously unselected package libjbig0:s390x. 126s Preparing to unpack .../44-libjbig0_2.1-6.1ubuntu2_s390x.deb ... 126s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ... 126s Selecting previously unselected package libwebp7:s390x. 126s Preparing to unpack .../45-libwebp7_1.4.0-0.1_s390x.deb ... 126s Unpacking libwebp7:s390x (1.4.0-0.1) ... 126s Selecting previously unselected package libtiff6:s390x. 126s Preparing to unpack .../46-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ... 126s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 126s Selecting previously unselected package libxft2:s390x. 126s Preparing to unpack .../47-libxft2_2.3.6-1build1_s390x.deb ... 126s Unpacking libxft2:s390x (2.3.6-1build1) ... 126s Selecting previously unselected package libxss1:s390x. 126s Preparing to unpack .../48-libxss1_1%3a1.2.3-1build3_s390x.deb ... 126s Unpacking libxss1:s390x (1:1.2.3-1build3) ... 126s Selecting previously unselected package libtk8.6:s390x. 126s Preparing to unpack .../49-libtk8.6_8.6.14-1build1_s390x.deb ... 126s Unpacking libtk8.6:s390x (8.6.14-1build1) ... 126s Selecting previously unselected package libxt6t64:s390x. 126s Preparing to unpack .../50-libxt6t64_1%3a1.2.1-1.2build1_s390x.deb ... 126s Unpacking libxt6t64:s390x (1:1.2.1-1.2build1) ... 126s Selecting previously unselected package openmpi-common. 126s Preparing to unpack .../51-openmpi-common_5.0.5-3_all.deb ... 126s Unpacking openmpi-common (5.0.5-3) ... 126s Selecting previously unselected package openmpi-bin. 126s Preparing to unpack .../52-openmpi-bin_5.0.5-3_s390x.deb ... 126s Unpacking openmpi-bin (5.0.5-3) ... 126s Selecting previously unselected package zip. 126s Preparing to unpack .../53-zip_3.0-14_s390x.deb ... 126s Unpacking zip (3.0-14) ... 126s Selecting previously unselected package unzip. 126s Preparing to unpack .../54-unzip_6.0-28ubuntu6_s390x.deb ... 126s Unpacking unzip (6.0-28ubuntu6) ... 126s Selecting previously unselected package xdg-utils. 126s Preparing to unpack .../55-xdg-utils_1.2.1-0ubuntu1_all.deb ... 126s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 126s Selecting previously unselected package r-base-core. 126s Preparing to unpack .../56-r-base-core_4.4.1-1_s390x.deb ... 126s Unpacking r-base-core (4.4.1-1) ... 127s Selecting previously unselected package r-cran-brio. 127s Preparing to unpack .../57-r-cran-brio_1.1.5-1_s390x.deb ... 127s Unpacking r-cran-brio (1.1.5-1) ... 127s Selecting previously unselected package r-cran-ps. 127s Preparing to unpack .../58-r-cran-ps_1.7.6-1_s390x.deb ... 127s Unpacking r-cran-ps (1.7.6-1) ... 127s Selecting previously unselected package r-cran-r6. 127s Preparing to unpack .../59-r-cran-r6_2.5.1-1_all.deb ... 127s Unpacking r-cran-r6 (2.5.1-1) ... 127s Selecting previously unselected package r-cran-processx. 127s Preparing to unpack .../60-r-cran-processx_3.8.4-1_s390x.deb ... 127s Unpacking r-cran-processx (3.8.4-1) ... 127s Selecting previously unselected package r-cran-callr. 127s Preparing to unpack .../61-r-cran-callr_3.7.6-1_all.deb ... 127s Unpacking r-cran-callr (3.7.6-1) ... 127s Selecting previously unselected package r-cran-cli. 127s Preparing to unpack .../62-r-cran-cli_3.6.2-1_s390x.deb ... 127s Unpacking r-cran-cli (3.6.2-1) ... 127s Selecting previously unselected package r-cran-crayon. 127s Preparing to unpack .../63-r-cran-crayon_1.5.2-1_all.deb ... 127s Unpacking r-cran-crayon (1.5.2-1) ... 127s Selecting previously unselected package r-cran-desc. 127s Preparing to unpack .../64-r-cran-desc_1.4.3-1_all.deb ... 127s Unpacking r-cran-desc (1.4.3-1) ... 127s Selecting previously unselected package r-cran-diffobj. 127s Preparing to unpack .../65-r-cran-diffobj_0.3.5-1_s390x.deb ... 127s Unpacking r-cran-diffobj (0.3.5-1) ... 127s Selecting previously unselected package r-cran-digest. 127s Preparing to unpack .../66-r-cran-digest_0.6.36-1_s390x.deb ... 127s Unpacking r-cran-digest (0.6.36-1) ... 127s Selecting previously unselected package r-cran-evaluate. 127s Preparing to unpack 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Copyright (C) 2024 The R Foundation for Statistical Computing 134s Platform: s390x-ibm-linux-gnu 134s 134s R is free software and comes with ABSOLUTELY NO WARRANTY. 134s You are welcome to redistribute it under certain conditions. 134s Type 'license()' or 'licence()' for distribution details. 134s 134s R is a collaborative project with many contributors. 134s Type 'contributors()' for more information and 134s 'citation()' on how to cite R or R packages in publications. 134s 134s Type 'demo()' for some demos, 'help()' for on-line help, or 134s 'help.start()' for an HTML browser interface to help. 134s Type 'q()' to quit R. 134s 134s > ### test.R: Runs all RUnit tests that work when the functions are accessed by direct 134s > ### import (i.e., pls::mvr(...)) 134s > 134s > 134s > ## Get warnings at once 134s > options(warn = 1) 134s > 134s > ## Make sure the global environment is clean: 134s > rm(list = ls(all = TRUE)) 134s > 134s > ## Get the data 134s > data(yarn, package = "pls") 134s > data(oliveoil, package = "pls") 134s > data(gasoline, package = "pls") 134s > 134s > ## Get RUnit and utility functions 134s > library(RUnit) 134s > source("RUnit/common/utils.R") 134s > 134s > ## Make checkException silent 134s > opts <- getOption("RUnit") 134s > opts$silent <- TRUE 134s > options(RUnit = opts) 134s > 134s > ## Define and check test suite 134s > testdirs <- c("RUnit/import") 134s > plsTestSuite <- defineTestSuite("pls", testdirs) 134s > isValidTestSuite(plsTestSuite) 134s [1] TRUE 134s > 134s > ## Run test suite 134s > printTextProtocol(res <- runTestSuite(plsTestSuite)) 134s 134s 134s Executing test function test.mvr ... Warning in RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) : 134s RNGkind: Marsaglia-Multicarry has poor statistical properties 134s Warning in RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) : 134s RNGkind: severe deviations from normality for Kinderman-Ramage + Marsaglia-Multicarry 134s done successfully. 134s 134s 134s 134s Executing test function test.pcr ... done successfully. 134s 134s 134s 134s Executing test function test.plsr ... done successfully. 134s 134s 134s 134s Executing test function test.options ... done successfully. 134s 134s RUNIT TEST PROTOCOL -- Fri Nov 1 22:35:01 2024 134s *********************************************** 134s Number of test functions: 4 134s Number of errors: 0 134s Number of failures: 0 134s 134s 134s 1 Test Suite : 134s pls - 4 test functions, 0 errors, 0 failures 134s 134s 134s 134s Details 134s *************************** 134s Warning in RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) : 134s RNGkind: Marsaglia-Multicarry has poor statistical properties 134s Warning in RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) : 134s RNGkind: severe deviations from normality for Kinderman-Ramage + Marsaglia-Multicarry 134s Test Suite: pls 134s Test function regexp: ^test.+ 134s Test file regexp: ^runit.+\.[rR]$ 134s Involved directory: 134s RUnit/import 134s --------------------------- 134s Test file: RUnit/import/runit.fit.R 134s test.mvr: (1 checks) ... OK (0.01 seconds) 134s test.pcr: (1 checks) ... OK (0 seconds) 134s test.plsr: (1 checks) ... OK (0 seconds) 134s --------------------------- 134s Test file: RUnit/import/runit.options.R 134s test.options: (2 checks) ... OK (0 seconds) 134s > if (res$pls$nFail > 0 || res$pls$nErr > 0) stop("One or more tests failed") 134s > 134s BEGIN TEST test_library.R 135s 135s R version 4.4.1 (2024-06-14) -- "Race for Your Life" 135s Copyright (C) 2024 The R Foundation for Statistical Computing 135s Platform: s390x-ibm-linux-gnu 135s 135s R is free software and comes with ABSOLUTELY NO WARRANTY. 135s You are welcome to redistribute it under certain conditions. 135s Type 'license()' or 'licence()' for distribution details. 135s 135s R is a collaborative project with many contributors. 135s Type 'contributors()' for more information and 135s 'citation()' on how to cite R or R packages in publications. 135s 135s Type 'demo()' for some demos, 'help()' for on-line help, or 135s 'help.start()' for an HTML browser interface to help. 135s Type 'q()' to quit R. 135s 135s > ### test.R: Runs all RUnit tests that work when the package is loaded with 135s > ### library() or require() 135s > 135s > 135s > ## Get warnings at once 135s > options(warn = 1) 135s > 135s > ## Make sure the global environment is clean: 135s > rm(list = ls(all = TRUE)) 135s > 135s > ## Get the pls functions and data 135s > library(pls) 135s 135s Attaching package: ‘pls’ 135s 135s The following object is masked from ‘package:stats’: 135s 135s loadings 135s 135s > 135s > ## Get RUnit and utility functions 135s > library(RUnit) 135s > source("RUnit/common/utils.R") 135s > 135s > ## Make checkException silent 135s > opts <- getOption("RUnit") 135s > opts$silent <- TRUE 135s > options(RUnit = opts) 135s > 135s > ## Define and check test suite 135s > testdirs <- c("RUnit/common", "RUnit/library") 135s > plsTestSuite <- defineTestSuite("pls", testdirs) 135s > isValidTestSuite(plsTestSuite) 135s [1] TRUE 135s > 135s > ## Run test suite 135s > printTextProtocol(res <- runTestSuite(plsTestSuite)) 135s Warning in RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) : 135s RNGkind: Marsaglia-Multicarry has poor statistical properties 135s Warning in RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) : 135s RNGkind: severe deviations from normality for Kinderman-Ramage + Marsaglia-Multicarry 135s 135s 135s Executing test function test.plsrRes ... Timing stopped at: 0.098 0.009 0.108 135s done successfully. 135s 135s 135s 135s Executing test function test.CV ... Error in checkEquals(scalecomps(refmod, scale = TRUE), scaled.simplsmod) : 135s Component “loadings”: Mean relative difference: 1.709882e-08 135s 135s Warning in RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) : 135s RNGkind: Marsaglia-Multicarry has poor statistical properties 135s Warning in RNGkind(kind = testSuite$rngKind, normal.kind = testSuite$rngNormalKind) : 135s RNGkind: severe deviations from normality for Kinderman-Ramage + Marsaglia-Multicarry 135s done successfully. 135s 135s 135s 135s Executing test function test.cvsegments ... done successfully. 135s 135s 135s 135s Executing test function test.jack.test ... done successfully. 135s 135s 135s 135s Executing test function test.var.jack ... done successfully. 135s 135s 135s 135s Executing test function test.argErrors ... done successfully. 135s 135s 135s 135s Executing test function test.dimMSEP ... done successfully. 135s 135s 135s 135s Executing test function test.dimR2 ... done successfully. 135s 135s 135s 135s Executing test function test.estimates ... done successfully. 135s 135s 135s 135s Executing test function test.MSEPmissing ... done successfully. 135s 135s 135s 135s Executing test function test.options ... done successfully. 135s 135s 135s 135s Executing test function test.NAtest ... done successfully. 135s 135s 135s 135s Executing test function test.NAtrain ... done successfully. 135s 135s 135s 136s Executing test function test.crossval.parallel ... Loading required package: parallel 137s done successfully. 137s 137s 137s 138s Executing test function test.mvrCv.parallel ... done successfully. 138s 138s 138s 138s Executing test function test.parallel.cleanup ... done successfully. 138s 138s 138s 138s Executing test function test.wrapper_eval ... done successfully. 138s 138s 138s 138s Executing test function test.wrapper_results ... done successfully. 138s 138s RUNIT TEST PROTOCOL -- Fri Nov 1 22:35:05 2024 138s *********************************************** 138s Number of test functions: 18 138s Number of errors: 0 138s Number of failures: 1 138s 138s 138s 1 Test Suite : 138s pls - 18 test functions, 0 errors, 1 failure 138s FAILURE in test.plsrRes: Error in checkEquals(scalecomps(refmod, scale = TRUE), scaled.simplsmod) : 138s Component “loadings”: Mean relative difference: 1.709882e-08 138s 138s There were 12 warnings (use warnings() to see them) 138s Error: One or more tests failed 138s Execution halted 138s 138s 138s 138s Details 138s *************************** 138s Test Suite: pls 138s Test function regexp: ^test.+ 138s Test file regexp: ^runit.+\.[rR]$ 138s Involved directories: 138s RUnit/common 138s RUnit/library 138s --------------------------- 138s Test file: RUnit/common/runit.algorithms.R 138s test.plsrRes: FAILURE !! (check number 5) 138s Error in checkEquals(scalecomps(refmod, scale = TRUE), scaled.simplsmod) : 138s Component “loadings”: Mean relative difference: 1.709882e-08 138s 138s --------------------------- 138s Test file: RUnit/common/runit.CV.R 138s test.CV: (9 checks) ... OK (0.13 seconds) 138s test.cvsegments: (18 checks) ... OK (0 seconds) 138s --------------------------- 138s Test file: RUnit/common/runit.jackknife.R 138s test.jack.test: (8 checks) ... OK (0.02 seconds) 138s test.var.jack: (8 checks) ... OK (0.1 seconds) 138s --------------------------- 138s Test file: RUnit/common/runit.mvrVal.R 138s test.argErrors: (3 checks) ... OK (0.02 seconds) 138s test.dimMSEP: (120 checks) ... OK (0.03 seconds) 138s test.dimR2: (104 checks) ... OK (0.03 seconds) 138s test.estimates: (6 checks) ... OK (0.01 seconds) 138s test.MSEPmissing: (8 checks) ... OK (0.02 seconds) 138s --------------------------- 138s Test file: RUnit/common/runit.options.R 138s test.options: (14 checks) ... OK (0 seconds) 138s --------------------------- 138s Test file: RUnit/common/runit.predict.R 138s test.NAtest: (14 checks) ... OK (0.01 seconds) 138s test.NAtrain: (32 checks) ... OK (0.01 seconds) 138s --------------------------- 138s Test file: RUnit/library/runit.CV.R 138s test.crossval.parallel: (5 checks) ... OK (1.65 seconds) 138s test.mvrCv.parallel: (5 checks) ... OK (0.79 seconds) 138s test.parallel.cleanup: (0 checks) ... OK (0 seconds) 138s --------------------------- 138s Test file: RUnit/library/runit.mvr_wrappers.R 138s test.wrapper_eval: (3 checks) ... OK (0 seconds) 138s test.wrapper_results: (3 checks) ... OK (0.11 seconds) 138s > if (res$pls$nFail > 0 || res$pls$nErr > 0) stop("One or more tests failed") 138s autopkgtest [22:35:05]: test run-unit-test: -----------------------] 138s autopkgtest [22:35:05]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 138s run-unit-test FAIL non-zero exit status 1 139s autopkgtest [22:35:06]: test pkg-r-autopkgtest: preparing testbed 140s Reading package lists... 140s Building dependency tree... 140s Reading state information... 140s Starting pkgProblemResolver with broken count: 0 140s Starting 2 pkgProblemResolver with broken count: 0 140s Done 141s The following additional packages will be installed: 141s build-essential cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu 141s dctrl-tools g++ g++-14 g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14 141s gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-14 141s gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools libasan8 141s libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev 141s libgfortran-14-dev libicu-dev libisl23 libitm1 libjpeg-dev 141s libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblzma-dev libmpc3 141s libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 141s libpkgconf3 libpng-dev libreadline-dev libstdc++-14-dev libtirpc-dev 141s libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev zlib1g-dev 141s Suggested packages: 141s cpp-doc gcc-14-locales cpp-14-doc debtags gcc-14-doc gcc-multilib 141s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 141s gdb-s390x-linux-gnu gfortran-doc gfortran-14-doc libcoarrays-dev 141s liblapack-doc icu-doc liblzma-doc ncurses-doc readline-doc libstdc++-14-doc 141s texlive-base texlive-latex-base texlive-plain-generic 141s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils 141s texlive-latex-recommended texlive-latex-extra texinfo 141s Recommended packages: 141s bzip2-doc libpng-tools 141s The following NEW packages will be installed: 141s autopkgtest-satdep build-essential cpp cpp-14 cpp-14-s390x-linux-gnu 141s cpp-s390x-linux-gnu dctrl-tools g++ g++-14 g++-14-s390x-linux-gnu 141s g++-s390x-linux-gnu gcc gcc-14 gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu 141s gfortran gfortran-14 gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu 141s icu-devtools libasan8 libblas-dev libbz2-dev libcc1-0 libdeflate-dev 141s libgcc-14-dev libgfortran-14-dev libicu-dev libisl23 libitm1 libjpeg-dev 141s libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblzma-dev libmpc3 141s libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 141s libpkgconf3 libpng-dev libreadline-dev libstdc++-14-dev libtirpc-dev 141s libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev zlib1g-dev 141s 0 upgraded, 52 newly installed, 0 to remove and 0 not upgraded. 141s Need to get 81.7 MB/81.7 MB of archives. 141s After this operation, 276 MB of additional disk space will be used. 141s Get:1 /tmp/autopkgtest.Tw1yv5/2-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [740 B] 141s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libisl23 s390x 0.27-1 [704 kB] 141s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB] 141s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-7ubuntu1 [9570 kB] 141s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14 s390x 14.2.0-7ubuntu1 [1022 B] 141s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [5452 B] 141s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x cpp s390x 4:14.1.0-2ubuntu1 [22.4 kB] 141s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libcc1-0 s390x 14.2.0-7ubuntu1 [50.6 kB] 141s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libitm1 s390x 14.2.0-7ubuntu1 [30.9 kB] 141s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libasan8 s390x 14.2.0-7ubuntu1 [2963 kB] 142s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libubsan1 s390x 14.2.0-7ubuntu1 [1184 kB] 142s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-14-dev s390x 14.2.0-7ubuntu1 [1037 kB] 142s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-7ubuntu1 [18.7 MB] 142s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14 s390x 14.2.0-7ubuntu1 [515 kB] 142s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [1204 B] 142s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x gcc s390x 4:14.1.0-2ubuntu1 [4996 B] 142s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++-14-dev s390x 14.2.0-7ubuntu1 [2607 kB] 142s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-7ubuntu1 [11.0 MB] 142s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14 s390x 14.2.0-7ubuntu1 [19.8 kB] 142s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x g++-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [956 B] 142s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x g++ s390x 4:14.1.0-2ubuntu1 [1076 B] 142s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x build-essential s390x 12.10ubuntu1 [4930 B] 142s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x dctrl-tools s390x 2.24-3build3 [106 kB] 142s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran-14-dev s390x 14.2.0-7ubuntu1 [654 kB] 142s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14-s390x-linux-gnu s390x 14.2.0-7ubuntu1 [10.3 MB] 143s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14 s390x 14.2.0-7ubuntu1 [11.6 kB] 143s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [1016 B] 143s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran s390x 4:14.1.0-2ubuntu1 [1160 B] 143s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x icu-devtools s390x 74.2-1ubuntu4 [222 kB] 143s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libblas-dev s390x 3.12.0-3build2 [239 kB] 143s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libbz2-dev s390x 1.0.8-6 [39.1 kB] 143s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate-dev s390x 1.21-1 [52.2 kB] 143s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libicu-dev s390x 74.2-1ubuntu4 [11.9 MB] 143s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8-dev s390x 2.1.5-2ubuntu2 [284 kB] 143s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B] 143s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B] 143s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack-dev s390x 3.12.0-3build2 [5956 kB] 143s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libncurses-dev s390x 6.5-2 [404 kB] 143s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-16-0 s390x 10.42-4ubuntu3 [236 kB] 143s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-32-0 s390x 10.42-4ubuntu3 [221 kB] 143s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-posix3 s390x 10.42-4ubuntu3 [6820 B] 143s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-dev s390x 10.42-4ubuntu3 [815 kB] 143s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x libpkgconf3 s390x 1.8.1-3ubuntu1 [31.2 kB] 143s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB] 143s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libpng-dev s390x 1.6.44-1 [276 kB] 143s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x libreadline-dev s390x 8.2-5 [187 kB] 143s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x liblzma-dev s390x 5.6.2-2 [183 kB] 143s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf-bin s390x 1.8.1-3ubuntu1 [21.4 kB] 143s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf s390x 1.8.1-3ubuntu1 [16.8 kB] 143s Get:50 http://ftpmaster.internal/ubuntu plucky/main s390x libtirpc-dev s390x 1.3.4+ds-1.3 [196 kB] 143s Get:51 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-dev all 4.4.1-1 [4338 B] 143s Get:52 http://ftpmaster.internal/ubuntu plucky/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 143s Fetched 81.7 MB in 3s (31.9 MB/s) 143s Selecting previously unselected package libisl23:s390x. 144s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 61688 files and directories currently installed.) 144s Preparing to unpack .../00-libisl23_0.27-1_s390x.deb ... 144s Unpacking libisl23:s390x (0.27-1) ... 144s Selecting previously unselected package libmpc3:s390x. 144s Preparing to unpack .../01-libmpc3_1.3.1-1build2_s390x.deb ... 144s Unpacking libmpc3:s390x (1.3.1-1build2) ... 144s Selecting previously unselected package cpp-14-s390x-linux-gnu. 144s Preparing to unpack .../02-cpp-14-s390x-linux-gnu_14.2.0-7ubuntu1_s390x.deb ... 144s Unpacking cpp-14-s390x-linux-gnu (14.2.0-7ubuntu1) ... 144s Selecting previously unselected package cpp-14. 144s Preparing to unpack .../03-cpp-14_14.2.0-7ubuntu1_s390x.deb ... 144s Unpacking cpp-14 (14.2.0-7ubuntu1) ... 144s Selecting previously unselected package cpp-s390x-linux-gnu. 144s Preparing to unpack .../04-cpp-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ... 144s Unpacking cpp-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 144s Selecting previously unselected package cpp. 144s Preparing to unpack .../05-cpp_4%3a14.1.0-2ubuntu1_s390x.deb ... 144s Unpacking cpp (4:14.1.0-2ubuntu1) ... 144s Selecting previously unselected package libcc1-0:s390x. 144s Preparing to unpack .../06-libcc1-0_14.2.0-7ubuntu1_s390x.deb ... 144s Unpacking libcc1-0:s390x (14.2.0-7ubuntu1) ... 144s Selecting previously unselected package libitm1:s390x. 144s Preparing to unpack .../07-libitm1_14.2.0-7ubuntu1_s390x.deb ... 144s Unpacking libitm1:s390x (14.2.0-7ubuntu1) ... 144s Selecting previously unselected package libasan8:s390x. 144s Preparing to unpack .../08-libasan8_14.2.0-7ubuntu1_s390x.deb ... 144s Unpacking libasan8:s390x (14.2.0-7ubuntu1) ... 144s Selecting previously unselected package libubsan1:s390x. 144s Preparing to unpack .../09-libubsan1_14.2.0-7ubuntu1_s390x.deb ... 144s Unpacking libubsan1:s390x (14.2.0-7ubuntu1) ... 144s Selecting previously unselected package libgcc-14-dev:s390x. 144s Preparing to unpack .../10-libgcc-14-dev_14.2.0-7ubuntu1_s390x.deb ... 144s Unpacking libgcc-14-dev:s390x (14.2.0-7ubuntu1) ... 144s Selecting previously unselected package gcc-14-s390x-linux-gnu. 144s Preparing to unpack .../11-gcc-14-s390x-linux-gnu_14.2.0-7ubuntu1_s390x.deb ... 144s Unpacking gcc-14-s390x-linux-gnu (14.2.0-7ubuntu1) ... 144s Selecting previously unselected package gcc-14. 144s Preparing to unpack .../12-gcc-14_14.2.0-7ubuntu1_s390x.deb ... 144s Unpacking gcc-14 (14.2.0-7ubuntu1) ... 144s Selecting previously unselected package gcc-s390x-linux-gnu. 144s Preparing to unpack .../13-gcc-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ... 144s Unpacking gcc-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 144s Selecting previously unselected package gcc. 144s Preparing to unpack .../14-gcc_4%3a14.1.0-2ubuntu1_s390x.deb ... 144s Unpacking gcc (4:14.1.0-2ubuntu1) ... 144s Selecting previously unselected package libstdc++-14-dev:s390x. 144s Preparing to unpack .../15-libstdc++-14-dev_14.2.0-7ubuntu1_s390x.deb ... 144s Unpacking libstdc++-14-dev:s390x (14.2.0-7ubuntu1) ... 144s Selecting previously unselected package g++-14-s390x-linux-gnu. 144s Preparing to unpack .../16-g++-14-s390x-linux-gnu_14.2.0-7ubuntu1_s390x.deb ... 144s Unpacking g++-14-s390x-linux-gnu (14.2.0-7ubuntu1) ... 144s Selecting previously unselected package g++-14. 144s Preparing to unpack .../17-g++-14_14.2.0-7ubuntu1_s390x.deb ... 144s Unpacking g++-14 (14.2.0-7ubuntu1) ... 144s Selecting previously unselected package g++-s390x-linux-gnu. 144s Preparing to unpack .../18-g++-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ... 144s Unpacking g++-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 144s Selecting previously unselected package g++. 144s Preparing to unpack .../19-g++_4%3a14.1.0-2ubuntu1_s390x.deb ... 144s Unpacking g++ (4:14.1.0-2ubuntu1) ... 144s Selecting previously unselected package build-essential. 144s Preparing to unpack .../20-build-essential_12.10ubuntu1_s390x.deb ... 144s Unpacking build-essential (12.10ubuntu1) ... 144s Selecting previously unselected package dctrl-tools. 144s Preparing to unpack .../21-dctrl-tools_2.24-3build3_s390x.deb ... 144s Unpacking dctrl-tools (2.24-3build3) ... 144s Selecting previously unselected package libgfortran-14-dev:s390x. 144s Preparing to unpack .../22-libgfortran-14-dev_14.2.0-7ubuntu1_s390x.deb ... 144s Unpacking libgfortran-14-dev:s390x (14.2.0-7ubuntu1) ... 144s Selecting previously unselected package gfortran-14-s390x-linux-gnu. 144s Preparing to unpack .../23-gfortran-14-s390x-linux-gnu_14.2.0-7ubuntu1_s390x.deb ... 144s Unpacking gfortran-14-s390x-linux-gnu (14.2.0-7ubuntu1) ... 145s Selecting previously unselected package gfortran-14. 145s Preparing to unpack .../24-gfortran-14_14.2.0-7ubuntu1_s390x.deb ... 145s Unpacking gfortran-14 (14.2.0-7ubuntu1) ... 145s Selecting previously unselected package gfortran-s390x-linux-gnu. 145s Preparing to unpack .../25-gfortran-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ... 145s Unpacking gfortran-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 145s Selecting previously unselected package gfortran. 145s Preparing to unpack .../26-gfortran_4%3a14.1.0-2ubuntu1_s390x.deb ... 145s Unpacking gfortran (4:14.1.0-2ubuntu1) ... 145s Selecting previously unselected package icu-devtools. 145s Preparing to unpack .../27-icu-devtools_74.2-1ubuntu4_s390x.deb ... 145s Unpacking icu-devtools (74.2-1ubuntu4) ... 145s Selecting previously unselected package libblas-dev:s390x. 145s Preparing to unpack .../28-libblas-dev_3.12.0-3build2_s390x.deb ... 145s Unpacking libblas-dev:s390x (3.12.0-3build2) ... 145s Selecting previously unselected package libbz2-dev:s390x. 145s Preparing to unpack .../29-libbz2-dev_1.0.8-6_s390x.deb ... 145s Unpacking libbz2-dev:s390x (1.0.8-6) ... 145s Selecting previously unselected package libdeflate-dev:s390x. 145s Preparing to unpack .../30-libdeflate-dev_1.21-1_s390x.deb ... 145s Unpacking libdeflate-dev:s390x (1.21-1) ... 145s Selecting previously unselected package libicu-dev:s390x. 145s Preparing to unpack .../31-libicu-dev_74.2-1ubuntu4_s390x.deb ... 145s Unpacking libicu-dev:s390x (74.2-1ubuntu4) ... 145s Selecting previously unselected package libjpeg-turbo8-dev:s390x. 145s Preparing to unpack .../32-libjpeg-turbo8-dev_2.1.5-2ubuntu2_s390x.deb ... 145s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu2) ... 145s Selecting previously unselected package libjpeg8-dev:s390x. 145s Preparing to unpack .../33-libjpeg8-dev_8c-2ubuntu11_s390x.deb ... 145s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ... 145s Selecting previously unselected package libjpeg-dev:s390x. 145s Preparing to unpack .../34-libjpeg-dev_8c-2ubuntu11_s390x.deb ... 145s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ... 145s Selecting previously unselected package liblapack-dev:s390x. 145s Preparing to unpack .../35-liblapack-dev_3.12.0-3build2_s390x.deb ... 145s Unpacking liblapack-dev:s390x (3.12.0-3build2) ... 145s Selecting previously unselected package libncurses-dev:s390x. 145s Preparing to unpack .../36-libncurses-dev_6.5-2_s390x.deb ... 145s Unpacking libncurses-dev:s390x (6.5-2) ... 145s Selecting previously unselected package libpcre2-16-0:s390x. 145s Preparing to unpack .../37-libpcre2-16-0_10.42-4ubuntu3_s390x.deb ... 145s Unpacking libpcre2-16-0:s390x (10.42-4ubuntu3) ... 145s Selecting previously unselected package libpcre2-32-0:s390x. 145s Preparing to unpack .../38-libpcre2-32-0_10.42-4ubuntu3_s390x.deb ... 145s Unpacking libpcre2-32-0:s390x (10.42-4ubuntu3) ... 145s Selecting previously unselected package libpcre2-posix3:s390x. 145s Preparing to unpack .../39-libpcre2-posix3_10.42-4ubuntu3_s390x.deb ... 145s Unpacking libpcre2-posix3:s390x (10.42-4ubuntu3) ... 145s Selecting previously unselected package libpcre2-dev:s390x. 145s Preparing to unpack .../40-libpcre2-dev_10.42-4ubuntu3_s390x.deb ... 145s Unpacking libpcre2-dev:s390x (10.42-4ubuntu3) ... 145s Selecting previously unselected package libpkgconf3:s390x. 145s Preparing to unpack .../41-libpkgconf3_1.8.1-3ubuntu1_s390x.deb ... 145s Unpacking libpkgconf3:s390x (1.8.1-3ubuntu1) ... 145s Selecting previously unselected package zlib1g-dev:s390x. 145s Preparing to unpack .../42-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_s390x.deb ... 145s Unpacking zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 145s Selecting previously unselected package libpng-dev:s390x. 145s Preparing to unpack .../43-libpng-dev_1.6.44-1_s390x.deb ... 145s Unpacking libpng-dev:s390x (1.6.44-1) ... 145s Selecting previously unselected package libreadline-dev:s390x. 145s Preparing to unpack .../44-libreadline-dev_8.2-5_s390x.deb ... 145s Unpacking libreadline-dev:s390x (8.2-5) ... 145s Selecting previously unselected package liblzma-dev:s390x. 145s Preparing to unpack .../45-liblzma-dev_5.6.2-2_s390x.deb ... 145s Unpacking liblzma-dev:s390x (5.6.2-2) ... 145s Selecting previously unselected package pkgconf-bin. 145s Preparing to unpack .../46-pkgconf-bin_1.8.1-3ubuntu1_s390x.deb ... 145s Unpacking pkgconf-bin (1.8.1-3ubuntu1) ... 145s Selecting previously unselected package pkgconf:s390x. 145s Preparing to unpack .../47-pkgconf_1.8.1-3ubuntu1_s390x.deb ... 145s Unpacking pkgconf:s390x (1.8.1-3ubuntu1) ... 145s Selecting previously unselected package libtirpc-dev:s390x. 145s Preparing to unpack .../48-libtirpc-dev_1.3.4+ds-1.3_s390x.deb ... 145s Unpacking libtirpc-dev:s390x (1.3.4+ds-1.3) ... 145s Selecting previously unselected package r-base-dev. 145s Preparing to unpack .../49-r-base-dev_4.4.1-1_all.deb ... 145s Unpacking r-base-dev (4.4.1-1) ... 145s Selecting previously unselected package pkg-r-autopkgtest. 145s Preparing to unpack .../50-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 145s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 145s Selecting previously unselected package autopkgtest-satdep. 145s Preparing to unpack .../51-2-autopkgtest-satdep.deb ... 145s Unpacking autopkgtest-satdep (0) ... 145s Setting up libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu2) ... 145s Setting up libncurses-dev:s390x (6.5-2) ... 145s Setting up libreadline-dev:s390x (8.2-5) ... 145s Setting up libpcre2-16-0:s390x (10.42-4ubuntu3) ... 145s Setting up libpcre2-32-0:s390x (10.42-4ubuntu3) ... 145s Setting up libtirpc-dev:s390x (1.3.4+ds-1.3) ... 145s Setting up libpkgconf3:s390x (1.8.1-3ubuntu1) ... 145s Setting up libmpc3:s390x (1.3.1-1build2) ... 145s Setting up icu-devtools (74.2-1ubuntu4) ... 145s Setting up pkgconf-bin (1.8.1-3ubuntu1) ... 145s Setting up liblzma-dev:s390x (5.6.2-2) ... 145s Setting up libubsan1:s390x (14.2.0-7ubuntu1) ... 145s Setting up zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 145s Setting up libpcre2-posix3:s390x (10.42-4ubuntu3) ... 145s Setting up libasan8:s390x (14.2.0-7ubuntu1) ... 145s Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ... 145s Setting up libisl23:s390x (0.27-1) ... 145s Setting up libdeflate-dev:s390x (1.21-1) ... 145s Setting up libicu-dev:s390x (74.2-1ubuntu4) ... 145s Setting up libcc1-0:s390x (14.2.0-7ubuntu1) ... 145s Setting up libblas-dev:s390x (3.12.0-3build2) ... 145s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so to provide /usr/lib/s390x-linux-gnu/libblas.so (libblas.so-s390x-linux-gnu) in auto mode 145s Setting up dctrl-tools (2.24-3build3) ... 145s Setting up libitm1:s390x (14.2.0-7ubuntu1) ... 145s Setting up libbz2-dev:s390x (1.0.8-6) ... 145s Setting up libpcre2-dev:s390x (10.42-4ubuntu3) ... 145s Setting up libpng-dev:s390x (1.6.44-1) ... 145s Setting up libjpeg-dev:s390x (8c-2ubuntu11) ... 145s Setting up pkgconf:s390x (1.8.1-3ubuntu1) ... 145s Setting up liblapack-dev:s390x (3.12.0-3build2) ... 145s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode 145s Setting up cpp-14-s390x-linux-gnu (14.2.0-7ubuntu1) ... 145s Setting up cpp-14 (14.2.0-7ubuntu1) ... 145s Setting up libgcc-14-dev:s390x (14.2.0-7ubuntu1) ... 145s Setting up libstdc++-14-dev:s390x (14.2.0-7ubuntu1) ... 145s Setting up libgfortran-14-dev:s390x (14.2.0-7ubuntu1) ... 145s Setting up cpp-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 145s Setting up gcc-14-s390x-linux-gnu (14.2.0-7ubuntu1) ... 145s Setting up gcc-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 145s Setting up g++-14-s390x-linux-gnu (14.2.0-7ubuntu1) ... 145s Setting up cpp (4:14.1.0-2ubuntu1) ... 145s Setting up gfortran-14-s390x-linux-gnu (14.2.0-7ubuntu1) ... 145s Setting up g++-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 145s Setting up gcc-14 (14.2.0-7ubuntu1) ... 145s Setting up g++-14 (14.2.0-7ubuntu1) ... 145s Setting up gfortran-14 (14.2.0-7ubuntu1) ... 145s Setting up gfortran-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 145s Setting up gcc (4:14.1.0-2ubuntu1) ... 145s Setting up g++ (4:14.1.0-2ubuntu1) ... 145s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 145s Setting up build-essential (12.10ubuntu1) ... 145s Setting up gfortran (4:14.1.0-2ubuntu1) ... 145s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 145s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 145s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 145s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 145s Setting up r-base-dev (4.4.1-1) ... 145s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 145s Setting up autopkgtest-satdep (0) ... 145s Processing triggers for man-db (2.12.1-3) ... 146s Processing triggers for install-info (7.1.1-1) ... 146s Processing triggers for libc-bin (2.40-1ubuntu3) ... 148s (Reading database ... 63637 files and directories currently installed.) 148s Removing autopkgtest-satdep (0) ... 148s autopkgtest [22:35:15]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 148s autopkgtest [22:35:15]: test pkg-r-autopkgtest: [----------------------- 148s Test: Try to load the R library pls 149s 149s R version 4.4.1 (2024-06-14) -- "Race for Your Life" 149s Copyright (C) 2024 The R Foundation for Statistical Computing 149s Platform: s390x-ibm-linux-gnu 149s 149s R is free software and comes with ABSOLUTELY NO WARRANTY. 149s You are welcome to redistribute it under certain conditions. 149s Type 'license()' or 'licence()' for distribution details. 149s 149s R is a collaborative project with many contributors. 149s Type 'contributors()' for more information and 149s 'citation()' on how to cite R or R packages in publications. 149s 149s Type 'demo()' for some demos, 'help()' for on-line help, or 149s 'help.start()' for an HTML browser interface to help. 149s Type 'q()' to quit R. 149s 149s > 149s Attaching package: ‘pls’ 149s 149s library('pls') 149s The following object is masked from ‘package:stats’: 149s 149s loadings 149s 149s > 149s > 149s Other tests are currently unsupported! 149s They will be progressively added. 149s autopkgtest [22:35:16]: test pkg-r-autopkgtest: -----------------------] 150s autopkgtest [22:35:17]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 150s pkg-r-autopkgtest PASS 150s autopkgtest [22:35:17]: @@@@@@@@@@@@@@@@@@@@ summary 150s run-unit-test FAIL non-zero exit status 1 150s pkg-r-autopkgtest PASS 166s nova [W] Using flock in prodstack6-s390x 166s flock: timeout while waiting to get lock 166s Creating nova instance adt-plucky-s390x-r-cran-pls-20241101-223247-juju-7f2275-prod-proposed-migration-environment-15-fe2cb0b9-0c8d-4ac0-bbf7-460cb5808cd1 from image adt/ubuntu-plucky-s390x-server-20241101.img (UUID efc880a6-ff20-4207-a161-b1113fd9bea7)...