0s autopkgtest [18:48:23]: starting date and time: 2025-03-15 18:48:23+0000
  0s autopkgtest [18:48:23]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  0s autopkgtest [18:48:23]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.17bqlr2e/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-party --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-s390x-5.secgroup --name adt-plucky-s390x-r-cran-party-20250315-181508-juju-7f2275-prod-proposed-migration-environment-20-be52deb4-8045-4b8e-874e-6f1fce30589c --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
108s autopkgtest [18:50:11]: testbed dpkg architecture: s390x
108s autopkgtest [18:50:11]: testbed apt version: 2.9.33
108s autopkgtest [18:50:11]: @@@@@@@@@@@@@@@@@@@@ test bed setup
109s autopkgtest [18:50:12]: testbed release detected to be: None
109s autopkgtest [18:50:12]: updating testbed package index (apt update)
110s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB]
110s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
110s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
110s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
110s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB]
110s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB]
110s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB]
110s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [113 kB]
110s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1824 B]
110s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B]
110s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [320 kB]
110s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [13.4 kB]
110s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3776 B]
110s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [240 B]
111s Fetched 1073 kB in 1s (1155 kB/s)
111s Reading package lists...
112s Reading package lists...
112s Building dependency tree...
112s Reading state information...
112s Calculating upgrade...
112s Calculating upgrade...
112s The following packages were automatically installed and are no longer required:
112s   libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64
112s   linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic
112s   linux-modules-6.11.0-8-generic linux-tools-6.11.0-8
112s   linux-tools-6.11.0-8-generic
112s Use 'sudo apt autoremove' to remove them.
112s The following packages will be upgraded:
112s   pinentry-curses python3-jinja2 strace
112s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
112s Need to get 652 kB of archives.
112s After this operation, 27.6 kB of additional disk space will be used.
112s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB]
113s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x pinentry-curses s390x 1.3.1-2ubuntu3 [42.9 kB]
113s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB]
113s Fetched 652 kB in 1s (1056 kB/s)
113s (Reading database ... 
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(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81428 files and directories currently installed.)
113s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ...
113s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ...
113s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_s390x.deb ...
113s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ...
113s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ...
113s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ...
113s Setting up pinentry-curses (1.3.1-2ubuntu3) ...
113s Setting up python3-jinja2 (3.1.5-2ubuntu1) ...
113s Setting up strace (6.13+ds-1ubuntu1) ...
113s Processing triggers for man-db (2.13.0-1) ...
114s Reading package lists...
114s Building dependency tree...
114s Reading state information...
114s Solving dependencies...
114s The following packages will be REMOVED:
114s   libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64*
114s   linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
114s   linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8*
114s   linux-tools-6.11.0-8-generic*
114s 0 upgraded, 0 newly installed, 9 to remove and 5 not upgraded.
114s After this operation, 167 MB disk space will be freed.
115s (Reading database ... 
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(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81428 files and directories currently installed.)
115s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
115s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
115s Removing libpython3.12t64:s390x (3.12.9-1) ...
115s Removing libpython3.12-stdlib:s390x (3.12.9-1) ...
115s Removing libnsl2:s390x (1.3.0-3build3) ...
115s Removing libpython3.12-minimal:s390x (3.12.9-1) ...
115s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
115s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
115s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
116s Processing triggers for libc-bin (2.41-1ubuntu1) ...
116s (Reading database ... 
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56328 files and directories currently installed.)
116s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ...
116s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
116s autopkgtest [18:50:19]: upgrading testbed (apt dist-upgrade and autopurge)
116s Reading package lists...
116s Building dependency tree...
116s Reading state information...
116s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
116s Starting 2 pkgProblemResolver with broken count: 0
116s Done
116s Entering ResolveByKeep
117s 
117s Calculating upgrade...
117s The following packages will be upgraded:
117s   libc-bin libc-dev-bin libc6 libc6-dev locales
117s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
117s Need to get 9512 kB of archives.
117s After this operation, 8192 B of additional disk space will be used.
117s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6-dev s390x 2.41-1ubuntu2 [1678 kB]
118s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-dev-bin s390x 2.41-1ubuntu2 [24.3 kB]
118s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6 s390x 2.41-1ubuntu2 [2892 kB]
118s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-bin s390x 2.41-1ubuntu2 [671 kB]
118s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x locales all 2.41-1ubuntu2 [4246 kB]
118s Preconfiguring packages ...
118s Fetched 9512 kB in 1s (7310 kB/s)
118s (Reading database ... 
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(Reading database ... 55%
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(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
118s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_s390x.deb ...
118s Unpacking libc6-dev:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
118s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_s390x.deb ...
118s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
118s Preparing to unpack .../libc6_2.41-1ubuntu2_s390x.deb ...
119s Unpacking libc6:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
119s Setting up libc6:s390x (2.41-1ubuntu2) ...
119s (Reading database ... 
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(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
119s Preparing to unpack .../libc-bin_2.41-1ubuntu2_s390x.deb ...
119s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
119s Setting up libc-bin (2.41-1ubuntu2) ...
119s (Reading database ... 
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(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
119s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ...
119s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
119s Setting up locales (2.41-1ubuntu2) ...
119s Generating locales (this might take a while)...
120s   en_US.UTF-8... done
120s Generation complete.
120s Setting up libc-dev-bin (2.41-1ubuntu2) ...
120s Setting up libc6-dev:s390x (2.41-1ubuntu2) ...
120s Processing triggers for man-db (2.13.0-1) ...
121s Processing triggers for systemd (257.3-1ubuntu3) ...
122s Reading package lists...
122s Building dependency tree...
122s Reading state information...
122s Starting pkgProblemResolver with broken count: 0
122s Starting 2 pkgProblemResolver with broken count: 0
122s Done
122s Solving dependencies...
122s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
122s autopkgtest [18:50:25]: rebooting testbed after setup commands that affected boot
143s autopkgtest [18:50:46]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP Wed Mar 12 14:53:49 UTC 2025
145s autopkgtest [18:50:48]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-party
147s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-party 1.3-18-1 (dsc) [2321 B]
147s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-party 1.3-18-1 (tar) [755 kB]
147s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-party 1.3-18-1 (diff) [3112 B]
147s gpgv: Signature made Wed Feb  5 01:30:32 2025 UTC
147s gpgv:                using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502
147s gpgv:                issuer "plessy@debian.org"
147s gpgv: Can't check signature: No public key
147s dpkg-source: warning: cannot verify inline signature for ./r-cran-party_1.3-18-1.dsc: no acceptable signature found
147s autopkgtest [18:50:50]: testing package r-cran-party version 1.3-18-1
147s autopkgtest [18:50:50]: build not needed
151s autopkgtest [18:50:54]: test run-unit-test: preparing testbed
151s Reading package lists...
151s Building dependency tree...
151s Reading state information...
151s Starting pkgProblemResolver with broken count: 0
151s Starting 2 pkgProblemResolver with broken count: 0
151s Done
151s The following NEW packages will be installed:
151s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
151s   fonts-glyphicons-halflings fonts-mathjax libblas3 libcairo2 libdatrie1
151s   libdeflate0 libfontconfig1 libfreetype6 libgfortran5 libgomp1 libgraphite2-3
151s   libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap
151s   libjs-highlight.js libjs-jquery libjs-jquery-datatables libjs-mathjax
151s   liblapack3 libnlopt0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
151s   libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6
151s   libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0
151s   libxft2 libxrender1 libxss1 libxt6t64 littler node-normalize.css r-base-core
151s   r-cran-abind r-cran-aer r-cran-backports r-cran-bit r-cran-bit64 r-cran-boot
151s   r-cran-broom r-cran-car r-cran-cardata r-cran-caret r-cran-cellranger
151s   r-cran-class r-cran-cli r-cran-clipr r-cran-clock r-cran-codetools
151s   r-cran-coin r-cran-colorspace r-cran-conquer r-cran-cowplot r-cran-cpp11
151s   r-cran-crayon r-cran-curl r-cran-data.table r-cran-deriv r-cran-diagram
151s   r-cran-digest r-cran-doby r-cran-dplyr r-cran-e1071 r-cran-ellipsis
151s   r-cran-evaluate r-cran-fansi r-cran-farver r-cran-forcats r-cran-foreach
151s   r-cran-foreign r-cran-formula r-cran-future r-cran-future.apply
151s   r-cran-generics r-cran-ggplot2 r-cran-globals r-cran-glue r-cran-gower
151s   r-cran-gtable r-cran-hardhat r-cran-haven r-cran-highr r-cran-hms
151s   r-cran-ipred r-cran-isoband r-cran-iterators r-cran-kernsmooth r-cran-knitr
151s   r-cran-labeling r-cran-lattice r-cran-lava r-cran-libcoin r-cran-lifecycle
151s   r-cran-listenv r-cran-littler r-cran-lme4 r-cran-lmtest r-cran-lubridate
151s   r-cran-magrittr r-cran-mass r-cran-matrix r-cran-matrixmodels
151s   r-cran-matrixstats r-cran-mgcv r-cran-microbenchmark r-cran-minqa
151s   r-cran-mlbench r-cran-modelmetrics r-cran-modelr r-cran-modeltools
151s   r-cran-multcomp r-cran-munsell r-cran-mvtnorm r-cran-nlme r-cran-nloptr
151s   r-cran-nnet r-cran-numderiv r-cran-openxlsx r-cran-parallelly r-cran-party
151s   r-cran-pbkrtest r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten r-cran-plyr
151s   r-cran-prettyunits r-cran-proc r-cran-prodlim r-cran-progress
151s   r-cran-progressr r-cran-proxy r-cran-purrr r-cran-quantreg
151s   r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils r-cran-r6 r-cran-randomforest
151s   r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp r-cran-rcpparmadillo
151s   r-cran-rcppeigen r-cran-rdpack r-cran-readr r-cran-readxl r-cran-recipes
151s   r-cran-reformulas r-cran-rematch r-cran-reshape2 r-cran-rio r-cran-rlang
151s   r-cran-rpart r-cran-sandwich r-cran-scales r-cran-shape r-cran-sparsem
151s   r-cran-squarem r-cran-statmod r-cran-stringi r-cran-stringr
151s   r-cran-strucchange r-cran-survival r-cran-th.data r-cran-tibble r-cran-tidyr
151s   r-cran-tidyselect r-cran-timechange r-cran-timedate r-cran-tzdb r-cran-utf8
151s   r-cran-vcd r-cran-vctrs r-cran-viridislite r-cran-vroom r-cran-withr
151s   r-cran-writexl r-cran-xfun r-cran-yaml r-cran-zip r-cran-zoo unzip
151s   x11-common xdg-utils zip
151s 0 upgraded, 202 newly installed, 0 to remove and 0 not upgraded.
151s Need to get 179 MB of archives.
151s After this operation, 348 MB of additional disk space will be used.
151s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB]
152s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB]
152s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB]
152s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-2ubuntu1 [37.5 kB]
152s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-2ubuntu1 [150 kB]
152s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig s390x 2.15.0-2ubuntu1 [191 kB]
153s Get:7 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
153s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB]
153s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.1-2 [252 kB]
153s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB]
154s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB]
154s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B]
154s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB]
154s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB]
154s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB]
154s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.23-1 [46.1 kB]
154s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 15-20250222-0ubuntu1 [620 kB]
154s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 15-20250222-0ubuntu1 [152 kB]
154s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB]
154s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB]
154s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB]
154s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB]
154s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB]
154s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B]
154s Get:25 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
154s Get:26 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB]
154s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
155s Get:28 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB]
155s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.1-2 [2971 kB]
156s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libthai-data all 0.1.29-2build1 [158 kB]
156s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB]
156s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libpango-1.0-0 s390x 1.56.2-1 [253 kB]
156s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libpangoft2-1.0-0 s390x 1.56.2-1 [50.2 kB]
156s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libpangocairo-1.0-0 s390x 1.56.2-1 [28.2 kB]
156s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB]
156s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB]
156s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB]
156s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libsm6 s390x 2:1.2.4-1 [18.4 kB]
156s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB]
156s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB]
156s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB]
157s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB]
157s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB]
157s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B]
157s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.16-1 [830 kB]
157s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB]
157s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x zip s390x 3.0-14ubuntu2 [187 kB]
157s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x unzip s390x 6.0-28ubuntu6 [186 kB]
157s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
157s Get:50 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-core s390x 4.4.3-1 [28.6 MB]
165s Get:51 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-littler s390x 0.3.20-2 [95.0 kB]
165s Get:52 http://ftpmaster.internal/ubuntu plucky/universe s390x littler all 0.3.20-2 [2554 B]
165s Get:53 http://ftpmaster.internal/ubuntu plucky/universe s390x node-normalize.css all 8.0.1-5 [10.8 kB]
165s Get:54 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-abind all 1.4-8-1 [66.9 kB]
165s Get:55 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cardata all 3.0.5-1 [1819 kB]
165s Get:56 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-formula all 1.2-5-1 [158 kB]
165s Get:57 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mass s390x 7.3-64-1 [1113 kB]
165s Get:58 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lattice s390x 0.22-6-1 [1340 kB]
165s Get:59 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-nlme s390x 3.1.167-1 [2323 kB]
165s Get:60 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-matrix s390x 1.7-3-1 [4449 kB]
166s Get:61 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mgcv s390x 1.9-1-1 [3348 kB]
166s Get:62 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-nnet s390x 7.3-20-1 [116 kB]
166s Get:63 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-boot all 1.3-31-1 [635 kB]
166s Get:64 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
166s Get:65 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcpp s390x 1.0.14-1 [2003 kB]
166s Get:66 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-minqa s390x 1.2.8-1 [139 kB]
166s Get:67 http://ftpmaster.internal/ubuntu plucky/universe s390x libnlopt0 s390x 2.7.1-6ubuntu3 [227 kB]
166s Get:68 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-nloptr s390x 2.1.1-1 [252 kB]
166s Get:69 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rbibutils s390x 2.3-1 [1041 kB]
166s Get:70 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rdpack all 2.6.2-1syncable1 [756 kB]
166s Get:71 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-reformulas all 0.4.0-1 [91.5 kB]
166s Get:72 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcppeigen s390x 0.3.4.0.2-1 [1429 kB]
166s Get:73 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-statmod s390x 1.5.0-1 [294 kB]
166s Get:74 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lme4 s390x 1.1-36-1 [4141 kB]
167s Get:75 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-backports s390x 1.5.0-2 [121 kB]
167s Get:76 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cli s390x 3.6.4-1 [1379 kB]
167s Get:77 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-generics all 0.1.3-1 [81.3 kB]
167s Get:78 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-glue s390x 1.8.0-1 [164 kB]
167s Get:79 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rlang s390x 1.1.5-1 [1713 kB]
167s Get:80 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
167s Get:81 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB]
167s Get:82 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB]
167s Get:83 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB]
167s Get:84 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pillar all 1.10.1+dfsg-1 [453 kB]
167s Get:85 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r6 all 2.6.1-1 [101 kB]
167s Get:86 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fansi s390x 1.0.5-1 [615 kB]
167s Get:87 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB]
167s Get:88 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tibble s390x 3.2.1+dfsg-3 [420 kB]
167s Get:89 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-withr all 3.0.2+dfsg-1 [214 kB]
167s Get:90 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tidyselect s390x 1.2.1+dfsg-1 [222 kB]
167s Get:91 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-dplyr s390x 1.1.4-4 [1537 kB]
167s Get:92 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-purrr s390x 1.0.4-1 [553 kB]
167s Get:93 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-stringi s390x 1.8.4-1build1 [917 kB]
167s Get:94 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-stringr all 1.5.1-1 [290 kB]
167s Get:95 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cpp11 all 0.5.2-1 [233 kB]
167s Get:96 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tidyr s390x 1.3.1-1 [1157 kB]
167s Get:97 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-broom all 1.0.7+dfsg-1 [1802 kB]
167s Get:98 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-numderiv all 2016.8-1.1-3 [115 kB]
167s Get:99 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-gtable all 0.3.6+dfsg-1 [199 kB]
167s Get:100 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-isoband s390x 0.2.7-1 [1481 kB]
167s Get:101 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-farver s390x 2.1.2-1 [1353 kB]
167s Get:102 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-labeling all 0.4.3-1 [62.1 kB]
168s Get:103 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-colorspace s390x 2.1-1+dfsg-1 [1567 kB]
168s Get:104 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-munsell all 0.5.1-1 [213 kB]
168s Get:105 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB]
168s Get:106 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-viridislite all 0.4.2-2 [1088 kB]
168s Get:107 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-scales all 1.3.0-1 [603 kB]
168s Get:108 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB]
169s Get:109 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cowplot all 1.1.3+dfsg-1 [614 kB]
169s Get:110 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-deriv all 4.1.6-1 [151 kB]
169s Get:111 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-modelr all 0.1.11-1 [195 kB]
169s Get:112 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-microbenchmark s390x 1.5.0-1 [67.2 kB]
169s Get:113 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-doby all 4.6.25-1 [4772 kB]
169s Get:114 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-evaluate all 1.0.3-1 [114 kB]
169s Get:115 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-xfun s390x 0.51+dfsg-1 [574 kB]
169s Get:116 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-highr all 0.11+dfsg-1 [38.5 kB]
169s Get:117 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-yaml s390x 2.3.10-1 [113 kB]
169s Get:118 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB]
170s Get:119 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-knitr all 1.49+dfsg-1 [859 kB]
170s Get:120 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pbkrtest all 0.5.3-1 [178 kB]
170s Get:121 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sparsem s390x 1.84-2-1 [826 kB]
170s Get:122 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-matrixmodels all 0.5-3-1 [361 kB]
170s Get:123 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-survival s390x 3.8-3-1 [8250 kB]
171s Get:124 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-matrixstats s390x 1.5.0-1 [539 kB]
171s Get:125 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcpparmadillo s390x 14.2.3-1-1 [851 kB]
171s Get:126 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-class s390x 7.3-23-1 [92.0 kB]
171s Get:127 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-proxy s390x 0.4-27-1 [182 kB]
171s Get:128 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-e1071 s390x 1.7-16-1 [572 kB]
171s Get:129 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-codetools all 0.2-20-1 [90.5 kB]
171s Get:130 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-iterators all 1.0.14-1 [336 kB]
171s Get:131 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-foreach all 1.5.2-1 [124 kB]
171s Get:132 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-data.table s390x 1.17.0+dfsg-1 [2167 kB]
171s Get:133 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-modelmetrics s390x 1.2.2.2-1build1 [122 kB]
171s Get:134 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-plyr s390x 1.8.9-1 [835 kB]
171s Get:135 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-proc s390x 1.18.5-1 [968 kB]
171s Get:136 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tzdb s390x 0.4.0-2 [514 kB]
171s Get:137 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-clock s390x 0.7.2-1 [1881 kB]
172s Get:138 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-gower s390x 1.0.2-1 [209 kB]
172s Get:139 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-hardhat all 1.4.0+dfsg-1 [565 kB]
172s Get:140 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rpart s390x 4.1.24-1 [672 kB]
172s Get:141 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-shape all 1.4.6.1-1 [749 kB]
172s Get:142 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-diagram all 1.6.5-2 [656 kB]
172s Get:143 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-kernsmooth s390x 2.23-26-1 [94.7 kB]
172s Get:144 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-digest s390x 0.6.37-1 [205 kB]
172s Get:145 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-globals all 0.16.3-1 [120 kB]
172s Get:146 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-listenv all 0.9.1+dfsg-1 [112 kB]
172s Get:147 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-parallelly s390x 1.42.0-1 [540 kB]
172s Get:148 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-future all 1.34.0+dfsg-1 [646 kB]
172s Get:149 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-future.apply all 1.11.3+dfsg-1 [175 kB]
172s Get:150 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-progressr all 0.15.1-1 [353 kB]
172s Get:151 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-squarem all 2021.1-1 [179 kB]
172s Get:152 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lava all 1.8.1+dfsg-1 [2191 kB]
172s Get:153 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-prodlim s390x 2024.06.25-1 [419 kB]
172s Get:154 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ipred s390x 0.9-15-1 [386 kB]
172s Get:155 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-timechange s390x 0.3.0-1 [185 kB]
173s Get:156 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lubridate s390x 1.9.4+dfsg-1 [1010 kB]
173s Get:157 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-timedate s390x 4041.110-1 [1209 kB]
173s Get:158 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-recipes all 1.1.0+dfsg-1 [2035 kB]
173s Get:159 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-reshape2 s390x 1.4.4-2build1 [111 kB]
173s Get:160 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-caret s390x 7.0-1+dfsg-1 [3461 kB]
173s Get:161 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-conquer s390x 1.3.3-1 [459 kB]
173s Get:162 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-quantreg s390x 6.00-1 [1457 kB]
174s Get:163 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-foreign s390x 0.8.88-1 [249 kB]
174s Get:164 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ellipsis s390x 0.3.2-2 [35.4 kB]
174s Get:165 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-forcats all 1.0.0-1 [369 kB]
174s Get:166 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-hms all 1.1.3-1 [96.5 kB]
174s Get:167 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-clipr all 0.8.0-1 [53.5 kB]
174s Get:168 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-crayon all 1.5.3-1 [165 kB]
174s Get:169 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bit s390x 4.6.0+dfsg-1 [471 kB]
174s Get:170 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bit64 s390x 4.6.0-1-1ubuntu2 [503 kB]
174s Get:171 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-prettyunits all 1.2.0-1 [162 kB]
174s Get:172 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-progress all 1.2.3-1 [91.9 kB]
174s Get:173 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-vroom s390x 1.6.5-1 [865 kB]
174s Get:174 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-readr s390x 2.1.5-1 [778 kB]
174s Get:175 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-haven s390x 2.5.4-1 [355 kB]
174s Get:176 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-curl s390x 6.2.1+dfsg-1ubuntu1 [196 kB]
174s Get:177 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rematch all 2.0.0-1 [18.3 kB]
174s Get:178 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cellranger all 1.1.0-3 [102 kB]
174s Get:179 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-readxl s390x 1.4.4-1 [360 kB]
174s Get:180 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-writexl s390x 1.5.1-1 [158 kB]
174s Get:181 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r.methodss3 all 1.8.2-1 [84.0 kB]
174s Get:182 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r.oo all 1.27.0-1 [979 kB]
174s Get:183 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r.utils all 2.13.0-1 [1423 kB]
174s Get:184 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-zip s390x 2.3.2-1 [151 kB]
174s Get:185 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-openxlsx s390x 4.2.8-1 [2045 kB]
175s Get:186 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rio all 1.2.3-1 [546 kB]
175s Get:187 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-car all 3.1-3-1 [1525 kB]
175s Get:188 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-zoo s390x 1.8-13-1 [998 kB]
175s Get:189 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lmtest s390x 0.9.40-1 [396 kB]
175s Get:190 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sandwich all 3.1-1-1 [1483 kB]
175s Get:191 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-aer all 1.2-14-1 [2597 kB]
176s Get:192 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mvtnorm s390x 1.3-3-1 [924 kB]
176s Get:193 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-libcoin s390x 1.0-10-1 [774 kB]
176s Get:194 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-modeltools all 0.2-23-2build1 [219 kB]
176s Get:195 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-th.data all 1.1-3-1 [8723 kB]
177s Get:196 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-multcomp all 1.4-28-1 [700 kB]
177s Get:197 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-coin s390x 1.4-3-1 [1562 kB]
177s Get:198 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mlbench s390x 2.1-6-1 [1050 kB]
177s Get:199 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-strucchange s390x 1.5-4-1 [943 kB]
177s Get:200 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-party s390x 1.3-18-1 [1136 kB]
177s Get:201 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-randomforest s390x 4.7-1.2-1 [224 kB]
177s Get:202 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-vcd all 1:1.4-13-1 [1281 kB]
178s Preconfiguring packages ...
178s Fetched 179 MB in 26s (6792 kB/s)
178s Selecting previously unselected package libfreetype6:s390x.
178s (Reading database ... 
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180s Selecting previously unselected package r-cran-tidyr.
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180s Selecting previously unselected package r-cran-broom.
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181s Selecting previously unselected package r-cran-rcolorbrewer.
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181s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ...
181s Selecting previously unselected package r-cran-viridislite.
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181s Selecting previously unselected package r-cran-scales.
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181s Unpacking r-cran-scales (1.3.0-1) ...
181s Selecting previously unselected package r-cran-ggplot2.
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181s Selecting previously unselected package r-cran-cowplot.
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181s Selecting previously unselected package r-cran-deriv.
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181s Selecting previously unselected package r-cran-modelr.
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181s Selecting previously unselected package r-cran-microbenchmark.
181s Preparing to unpack .../111-r-cran-microbenchmark_1.5.0-1_s390x.deb ...
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181s Selecting previously unselected package r-cran-doby.
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181s Selecting previously unselected package r-cran-evaluate.
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181s Selecting previously unselected package r-cran-knitr.
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181s Selecting previously unselected package r-cran-pbkrtest.
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181s Selecting previously unselected package r-cran-matrixmodels.
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181s Selecting previously unselected package r-cran-survival.
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181s Selecting previously unselected package r-cran-matrixstats.
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181s Selecting previously unselected package r-cran-rcpparmadillo.
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181s Selecting previously unselected package r-cran-class.
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182s Selecting previously unselected package r-cran-e1071.
182s Preparing to unpack .../127-r-cran-e1071_1.7-16-1_s390x.deb ...
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182s Selecting previously unselected package r-cran-codetools.
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182s Selecting previously unselected package r-cran-iterators.
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182s Selecting previously unselected package r-cran-foreach.
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182s Selecting previously unselected package r-cran-data.table.
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182s Selecting previously unselected package r-cran-modelmetrics.
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182s Selecting previously unselected package r-cran-plyr.
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182s Selecting previously unselected package r-cran-proc.
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182s Selecting previously unselected package r-cran-tzdb.
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182s Selecting previously unselected package r-cran-clock.
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182s Selecting previously unselected package r-cran-gower.
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182s Selecting previously unselected package r-cran-hardhat.
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182s Selecting previously unselected package r-cran-rpart.
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182s Selecting previously unselected package r-cran-shape.
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182s Selecting previously unselected package r-cran-diagram.
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182s Selecting previously unselected package r-cran-kernsmooth.
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182s Selecting previously unselected package r-cran-digest.
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182s Selecting previously unselected package r-cran-globals.
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182s Selecting previously unselected package r-cran-listenv.
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182s Selecting previously unselected package r-cran-parallelly.
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182s Selecting previously unselected package r-cran-future.
182s Preparing to unpack .../147-r-cran-future_1.34.0+dfsg-1_all.deb ...
182s Unpacking r-cran-future (1.34.0+dfsg-1) ...
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182s Selecting previously unselected package r-cran-progressr.
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182s Selecting previously unselected package r-cran-squarem.
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182s Selecting previously unselected package r-cran-lava.
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182s Selecting previously unselected package r-cran-prodlim.
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182s Selecting previously unselected package r-cran-ipred.
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182s Selecting previously unselected package r-cran-lubridate.
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182s Selecting previously unselected package r-cran-recipes.
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182s Selecting previously unselected package r-cran-reshape2.
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182s Selecting previously unselected package r-cran-caret.
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182s Selecting previously unselected package r-cran-ellipsis.
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182s Selecting previously unselected package r-cran-hms.
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182s Selecting previously unselected package r-cran-clipr.
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182s Selecting previously unselected package r-cran-bit.
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182s Selecting previously unselected package r-cran-bit64.
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182s Selecting previously unselected package r-cran-prettyunits.
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182s Selecting previously unselected package r-cran-progress.
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182s Selecting previously unselected package r-cran-vroom.
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182s Selecting previously unselected package r-cran-readr.
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182s Selecting previously unselected package r-cran-haven.
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182s Selecting previously unselected package r-cran-curl.
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182s Selecting previously unselected package r-cran-rematch.
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182s Selecting previously unselected package r-cran-cellranger.
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183s Selecting previously unselected package r-cran-zoo.
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183s Selecting previously unselected package r-cran-lmtest.
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183s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
183s Setting up libpixman-1-0:s390x (0.44.0-3) ...
183s Setting up libsharpyuv0:s390x (1.5.0-0.1) ...
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183s Setting up libjs-mathjax (2.7.9+dfsg-1) ...
183s Setting up libxrender1:s390x (1:0.9.10-1.1build1) ...
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183s Setting up unzip (6.0-28ubuntu6) ...
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183s Setting up libdeflate0:s390x (1.23-1) ...
183s Setting up libnlopt0:s390x (2.7.1-6ubuntu3) ...
183s Setting up libxcb-shm0:s390x (1.17.0-2) ...
183s Setting up libgomp1:s390x (15-20250222-0ubuntu1) ...
183s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ...
183s Setting up zip (3.0-14ubuntu2) ...
183s Setting up libblas3:s390x (3.12.1-2) ...
183s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
183s Setting up libfreetype6:s390x (2.13.3+dfsg-1) ...
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185s Regenerating fonts cache... done.
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185s Setting up r-base-core (4.4.3-1) ...
186s Creating config file /etc/R/Renviron with new version
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186s Setting up r-cran-labeling (0.4.3-1) ...
186s Setting up r-cran-lattice (0.22-6-1) ...
186s Setting up r-cran-nlme (3.1.167-1) ...
186s Setting up r-cran-modeltools (0.2-23-2build1) ...
186s Setting up r-cran-farver (2.1.2-1) ...
186s Setting up r-cran-formula (1.2-5-1) ...
186s Setting up r-cran-zip (2.3.2-1) ...
186s Setting up r-cran-viridislite (0.4.2-2) ...
186s Setting up r-cran-sparsem (1.84-2-1) ...
186s Setting up r-cran-statmod (1.5.0-1) ...
186s Setting up r-cran-nnet (7.3-20-1) ...
186s Setting up r-cran-clipr (0.8.0-1) ...
186s Setting up r-cran-proxy (0.4-27-1) ...
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186s Setting up r-cran-pkgkitten (0.2.4-1) ...
186s Setting up r-cran-numderiv (2016.8-1.1-3) ...
186s Setting up r-cran-magrittr (2.0.3-1) ...
186s Setting up r-cran-microbenchmark (1.5.0-1) ...
186s Setting up r-cran-littler (0.3.20-2) ...
186s Setting up r-cran-rcpp (1.0.14-1) ...
186s Setting up r-cran-curl (6.2.1+dfsg-1ubuntu1) ...
186s Setting up r-cran-codetools (0.2-20-1) ...
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186s Setting up r-cran-matrixstats (1.5.0-1) ...
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186s Setting up littler (0.3.20-2) ...
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186s Setting up r-cran-randomforest (4.7-1.2-1) ...
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186s Setting up r-cran-ellipsis (0.3.2-2) ...
186s Setting up r-cran-minqa (1.2.8-1) ...
186s Setting up r-cran-libcoin (1.0-10-1) ...
186s Setting up r-cran-stringr (1.5.1-1) ...
186s Setting up r-cran-class (7.3-23-1) ...
186s Setting up r-cran-modelmetrics (1.2.2.2-1build1) ...
186s Setting up r-cran-openxlsx (4.2.8-1) ...
186s Setting up r-cran-matrixmodels (0.5-3-1) ...
186s Setting up r-cran-munsell (0.5.1-1) ...
186s Setting up r-cran-tibble (3.2.1+dfsg-3) ...
186s Setting up r-cran-clock (0.7.2-1) ...
186s Setting up r-cran-sandwich (3.1-1-1) ...
186s Setting up r-cran-proc (1.18.5-1) ...
186s Setting up r-cran-survival (3.8-3-1) ...
186s Setting up r-cran-r.oo (1.27.0-1) ...
186s Setting up r-cran-rdpack (2.6.2-1syncable1) ...
186s Setting up r-cran-future (1.34.0+dfsg-1) ...
186s Setting up r-cran-vcd (1:1.4-13-1) ...
186s Setting up r-cran-forcats (1.0.0-1) ...
186s Setting up r-cran-strucchange (1.5-4-1) ...
186s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ...
186s Setting up r-cran-reshape2 (1.4.4-2build1) ...
186s Setting up r-cran-future.apply (1.11.3+dfsg-1) ...
186s Setting up r-cran-timechange (0.3.0-1) ...
186s Setting up r-cran-th.data (1.1-3-1) ...
186s Setting up r-cran-hms (1.1.3-1) ...
186s Setting up r-cran-scales (1.3.0-1) ...
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186s Setting up r-cran-reformulas (0.4.0-1) ...
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186s Setting up r-cran-vroom (1.6.5-1) ...
186s Setting up r-cran-prodlim (2024.06.25-1) ...
186s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ...
186s Setting up r-cran-cellranger (1.1.0-3) ...
186s Setting up r-cran-rpart (4.1.24-1) ...
186s Setting up r-cran-ipred (0.9-15-1) ...
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186s Setting up r-cran-readr (2.1.5-1) ...
186s Setting up r-cran-tidyr (1.3.1-1) ...
186s Setting up r-cran-recipes (1.1.0+dfsg-1) ...
186s Setting up r-cran-cowplot (1.1.3+dfsg-1) ...
186s Setting up r-cran-readxl (1.4.4-1) ...
186s Setting up r-cran-haven (2.5.4-1) ...
186s Setting up r-cran-caret (7.0-1+dfsg-1) ...
186s Setting up r-cran-party (1.3-18-1) ...
186s Setting up r-cran-broom (1.0.7+dfsg-1) ...
186s Setting up r-cran-conquer (1.3.3-1) ...
186s Setting up r-cran-rio (1.2.3-1) ...
186s Setting up r-cran-quantreg (6.00-1) ...
186s Setting up r-cran-modelr (0.1.11-1) ...
186s Setting up r-cran-doby (4.6.25-1) ...
186s Setting up r-cran-pbkrtest (0.5.3-1) ...
186s Setting up r-cran-car (3.1-3-1) ...
186s Setting up r-cran-aer (1.2-14-1) ...
186s Processing triggers for libc-bin (2.41-1ubuntu2) ...
186s Processing triggers for man-db (2.13.0-1) ...
186s Processing triggers for install-info (7.1.1-1) ...
187s autopkgtest [18:51:30]: test run-unit-test: [-----------------------
187s BEGIN TEST Distributions.R
187s 
187s R version 4.4.3 (2025-02-28) -- "Trophy Case"
187s Copyright (C) 2025 The R Foundation for Statistical Computing
187s Platform: s390x-ibm-linux-gnu
187s 
187s R is free software and comes with ABSOLUTELY NO WARRANTY.
187s You are welcome to redistribute it under certain conditions.
187s Type 'license()' or 'licence()' for distribution details.
187s 
187s R is a collaborative project with many contributors.
187s Type 'contributors()' for more information and
187s 'citation()' on how to cite R or R packages in publications.
187s 
187s Type 'demo()' for some demos, 'help()' for on-line help, or
187s 'help.start()' for an HTML browser interface to help.
187s Type 'q()' to quit R.
187s 
187s > 
187s > set.seed(290875)
187s > library("party")
187s Loading required package: grid
187s Loading required package: mvtnorm
187s Loading required package: modeltools
187s Loading required package: stats4
187s Loading required package: strucchange
187s Loading required package: zoo
187s 
187s Attaching package: ‘zoo’
187s 
187s The following objects are masked from ‘package:base’:
187s 
187s     as.Date, as.Date.numeric
187s 
187s Loading required package: sandwich
188s > if (!require("mvtnorm"))
188s +     stop("cannot load package mvtnorm")
188s > 
188s > 
188s > ### get rid of the NAMESPACE
188s > attach(list2env(as.list(asNamespace("party"))))
188s The following objects are masked from package:party:
188s 
188s     cforest, cforest_classical, cforest_control, cforest_unbiased,
188s     conditionalTree, ctree, ctree_control, edge_simple,
188s     initVariableFrame, mob, mob_control, node_barplot, node_bivplot,
188s     node_boxplot, node_density, node_hist, node_inner,
188s     node_scatterplot, node_surv, node_terminal, nodes, party_intern,
188s     prettytree, proximity, ptrafo, response, reweight, sctest.mob,
188s     treeresponse, varimp, varimpAUC, where
188s 
188s > 
188s > ### 
188s > ###
188s > ###    Regression tests for conditional distributions
188s > ###    
188s > ###    functions defined in file `./src/Distributions.c'
188s > 
188s > ### chisq-distribution of quadratic forms
188s > t <- 2.1
188s > df <- 2
188s > storage.mode(t) <- "double"
188s > storage.mode(df) <- "double"
188s > stopifnot(isequal(1 - pchisq(t, df = df), ### P-values!!!
188s +           .Call(R_quadformConditionalPvalue, t, df)))
188s > 
188s > stopifnot(isequal(2*pnorm(-t), 
188s +           .Call(R_maxabsConditionalPvalue, t, matrix(1), as.integer(1), 0.0, 0.0, 0.0)))
188s > 
188s > 
188s > maxpts <- 25000
188s > storage.mode(maxpts) <- "integer"
188s > abseps <- 0.0001
188s > releps <- 0
188s > tol <- 1e-10
188s > 
188s > a <- 1.96
188s > b <- diag(2)
188s > 
188s > p1 <- .Call(R_maxabsConditionalPvalue, a, b, maxpts, abseps, releps, tol)
188s > p2 <- pmvnorm(lower = rep(-a,2), upper = rep(a,2), corr = b)
188s > stopifnot(isequal(round(p1, 3), round(1 - p2, 3)))
188s > 
188s > b <- diag(4)
188s > p1 <- .Call(R_maxabsConditionalPvalue, a, b, maxpts, abseps, releps, tol)
188s > p2 <- pmvnorm(lower = rep(-a,4), upper = rep(a,4), corr = b)
188s > stopifnot(isequal(round(p1, 3), round(1 - p2, 3)))
188s > 
188s > b <- diag(4)
188s > b[upper.tri(b)] <- c(0.1, 0.2, 0.3)
188s > b[lower.tri(b)] <- t(b)[lower.tri(b)]
188s > p1 <- .Call(R_maxabsConditionalPvalue, a, b, maxpts, abseps, releps, tol)
188s > p2 <- pmvnorm(lower = rep(-a,4), upper = rep(a,4), corr = b)
188s > stopifnot(isequal(round(p1, 3), round(1 - p2, 3)))
188s > 
188s > if (FALSE) {
188s + ### Monte-Carlo approximation of P-Values, univariate
188s + mydata = data.frame(y = gl(2, 50), x1 = rnorm(100),  
188s +                     x2 = rnorm(100), x3 = rnorm(100))
188s + inp <- initVariableFrame(mydata[,"x1",drop = FALSE], trafo = function(data)
188s + ptrafo(data, numeric_trafo = rank))
188s + resp <- initVariableFrame(mydata[,"y",drop = FALSE], trafo = NULL, response = TRUE)
188s + ls <- new("LearningSample", inputs = inp, responses = resp,
188s +           weights = rep(1, inp@nobs), nobs = nrow(mydata),
188s +           ninputs = inp@ninputs)
188s + tm <- ctree_memory(ls)
188s + varctrl <- new("VariableControl")
188s + varctrl@teststat <- factor("max", levels = c("max", "quad"))
188s + varctrl@pvalue <- FALSE
188s + gtctrl <- new("GlobalTestControl")
188s + gtctrl@testtype <- factor("MonteCarlo", levels = levels(gtctrl@testtype))
188s + gtctrl@nresample <- as.integer(19999)
188s + 
188s + pvals <- .Call(R_GlobalTest, ls, ls@weights, tm, varctrl, gtctrl)
188s + wstat <- abs(qnorm(wilcox.test(x1 ~ y, data = mydata, 
188s +              exact = FALSE, correct = FALSE)$p.value/2))
188s + wpval <- wilcox.test(x1 ~ y, data = mydata, exact = TRUE)$p.value
188s + stopifnot(isequal(wstat, pvals[[1]]))
188s + stopifnot(abs(wpval - (1 - pvals[[2]])) < 0.01)
188s + 
188s + ### Monte-Carlo approximations of P-Values, multiple inputs
188s + mydata = data.frame(y = gl(2, 50), x1 = rnorm(100),  
188s +                     x2 = rnorm(100), x3 = rnorm(100))
188s + inp <- initVariableFrame(mydata[,c("x1", "x2", "x3"),
188s +                                 drop = FALSE], trafo = function(data)
188s + ptrafo(data, numeric_trafo = rank))
188s + resp <- initVariableFrame(mydata[,"y",drop = FALSE], trafo = NULL, response = TRUE)
188s + ls <- new("LearningSample", inputs = inp, responses = resp,
188s +           weights = rep(1, inp@nobs), nobs = nrow(mydata),
188s +           ninputs = inp@ninputs)
188s + tm <- ctree_memory(ls)
188s + varctrl <- new("VariableControl")
188s + varctrl@teststat <- factor("max", levels = c("max", "quad"))
188s + varctrl@pvalue <- TRUE
188s + gtctrl <- new("GlobalTestControl")
188s + gtctrl@testtype <- factor("Univariate", levels = levels(gtctrl@testtype))
188s + gtctrl@nresample <- as.integer(19999)
188s + 
188s + pvals <- .Call(R_GlobalTest, ls, ls@weights, tm, varctrl, gtctrl)
188s + wstat <- c(abs(qnorm(wilcox.test(x1 ~ y, data = mydata, 
188s +                exact = FALSE, correct = FALSE)$p.value/2)),
188s +            abs(qnorm(wilcox.test(x2 ~ y, data = mydata, 
188s +                exact = FALSE, correct = FALSE)$p.value/2)),
188s +            abs(qnorm(wilcox.test(x3 ~ y, data = mydata, 
188s +                exact = FALSE, correct = FALSE)$p.value/2)))
188s + wpval <- c(wilcox.test(x1 ~ y, data = mydata, 
188s +                exact = FALSE, correct = FALSE)$p.value,
188s +            wilcox.test(x2 ~ y, data = mydata, 
188s +                exact = FALSE, correct = FALSE)$p.value,
188s +            wilcox.test(x3 ~ y, data = mydata, 
188s +                exact = FALSE, correct = FALSE)$p.value)
188s + stopifnot(isequal(wstat, pvals[[1]]))
188s + stopifnot(isequal(wpval, 1 - pvals[[2]]))
188s + 
188s + ### Monte-Carlo approximations of P-Values, min-P approach
188s + gtctrl@testtype <- factor("MonteCarlo", levels = levels(gtctrl@testtype))
188s + gtctrl@nresample <- as.integer(19999)
188s + pvals <- .Call(R_GlobalTest, ls, ls@weights, tm, varctrl, gtctrl)
188s + stopifnot(isequal(wstat, pvals[[1]]))
188s + stopifnot(all(wpval < (1 - pvals[[2]])))
188s + }
188s > 
188s BEGIN TEST LinearStatistic-regtest.R
188s 
188s R version 4.4.3 (2025-02-28) -- "Trophy Case"
188s Copyright (C) 2025 The R Foundation for Statistical Computing
188s Platform: s390x-ibm-linux-gnu
188s 
188s R is free software and comes with ABSOLUTELY NO WARRANTY.
188s You are welcome to redistribute it under certain conditions.
188s Type 'license()' or 'licence()' for distribution details.
188s 
188s R is a collaborative project with many contributors.
188s Type 'contributors()' for more information and
188s 'citation()' on how to cite R or R packages in publications.
188s 
188s Type 'demo()' for some demos, 'help()' for on-line help, or
188s 'help.start()' for an HTML browser interface to help.
188s Type 'q()' to quit R.
188s 
188s > 
188s > set.seed(290875)
188s > library("party")
188s Loading required package: grid
188s Loading required package: mvtnorm
188s Loading required package: modeltools
188s Loading required package: stats4
188s Loading required package: strucchange
188s Loading required package: zoo
188s 
188s Attaching package: ‘zoo’
188s 
188s The following objects are masked from ‘package:base’:
188s 
188s     as.Date, as.Date.numeric
188s 
188s Loading required package: sandwich
189s > 
189s > ### get rid of the NAMESPACE
189s > attach(list2env(as.list(asNamespace("party"))))
189s The following objects are masked from package:party:
189s 
189s     cforest, cforest_classical, cforest_control, cforest_unbiased,
189s     conditionalTree, ctree, ctree_control, edge_simple,
189s     initVariableFrame, mob, mob_control, node_barplot, node_bivplot,
189s     node_boxplot, node_density, node_hist, node_inner,
189s     node_scatterplot, node_surv, node_terminal, nodes, party_intern,
189s     prettytree, proximity, ptrafo, response, reweight, sctest.mob,
189s     treeresponse, varimp, varimpAUC, where
189s 
189s > 
189s > ### 
189s > ###
189s > ###    Regression tests for linear statistics, expectations and covariances
189s > ###    
189s > ###    functions defined in file `./src/LinearStatistics.c'    
189s > 
189s > ### tests for function C_LinearStatistic
189s > ### Linear Statistics
189s > x = matrix(c(rep.int(1,4), rep.int(0,6)), ncol = 1)
189s > y = matrix(1:10, ncol = 1)
189s > weights = rep(1, 10)
189s > linstat = LinearStatistic(x, y, weights)
189s > stopifnot(isequal(linstat, sum(1:4)))
189s > 
189s > weights[1] = 0
189s > linstat = LinearStatistic(x, y, weights) 
189s > stopifnot(isequal(linstat, sum(2:4)))
189s > 
189s > xf <- gl(3, 10)
189s > yf <- gl(3, 10)[sample(1:30)]
189s > x <- sapply(levels(xf), function(l) as.numeric(xf == l))
189s > colnames(x) <- NULL
189s > y <- sapply(levels(yf), function(l) as.numeric(yf == l))
189s > colnames(y) <- NULL
189s > weights <- sample(1:30)
189s > linstat <- LinearStatistic(x, y, weights) 
189s > stopifnot(isequal(linstat, as.vector(t(x) %*% diag(weights) %*% y)))
189s > 
189s > xf <- factor(cut(rnorm(6000), breaks = c(-Inf, -2, 0.5, Inf)))
189s > x <- sapply(levels(xf), function(l) as.numeric(xf == l))
189s > yf <- factor(cut(rnorm(6000), breaks = c(-Inf, -0.5, 1.5, Inf)))
189s > y <- sapply(levels(yf), function(l) as.numeric(yf == l))
189s > weights <- rep(1, nrow(x))
189s > colnames(x) <- NULL
189s > colnames(y) <- NULL
189s > weights <- rep(1, 6000)
189s > linstat <- LinearStatistic(x, y, weights)
189s > stopifnot(isequal(as.vector(table(xf, yf)), linstat))
189s > stopifnot(isequal(as.vector(t(x)%*%y), linstat))
189s > 
189s > 
189s > ### tests for function C_ExpectCovarInfluence
189s > eci <- ExpectCovarInfluence(y, weights)
189s > isequal(eci@sumweights, sum(weights))
189s [1] TRUE
189s > isequal(eci@expectation, drop(weights %*% y / sum(weights)))
189s [1] TRUE
189s > ys <- t(t(y) - eci@expectation)
189s > stopifnot(isequal(eci@covariance, (t(ys) %*% (weights * ys)) /
189s +                   sum(weights)))
189s > 
189s > ### tests for function C_ExpectCovarLinearStatistic
189s > ### Conditional Expectation and Variance (via Kruskal-Wallis statistic)
189s > 
189s > ### case 1: p > 1, q = 1
189s > group <- gl(3, 5)
189s > x <- sapply(levels(group), function(l) as.numeric(group == l))
189s > y <- matrix(1:15, ncol = 1)
189s > weights <- rep(1, 15)
189s > 
189s > linstat <- LinearStatistic(x, y, weights)
189s > expcov <- ExpectCovarLinearStatistic(x, y, weights)
189s > KW <- quadformTestStatistic(linstat, expcov@expectation, expcov@covariance)
189s > kts <- kruskal.test(y ~ group)$statistic
189s > stopifnot(isequal(KW, kts))
189s > 
189s > ### case 2: p = 1, q > 1
189s > linstat <- LinearStatistic(y, x, weights)
189s > expcov <- ExpectCovarLinearStatistic(y, x, weights)
189s > KW <- quadformTestStatistic(linstat, expcov@expectation, expcov@covariance)
189s > kts <- kruskal.test(y ~ group)$statistic
189s > stopifnot(isequal(KW, kts))
189s > 
189s > ### case 3: p = 1, q = 1
189s > x <- x[,1,drop = FALSE]
189s > linstat <- LinearStatistic(x, y, weights)
189s > expcov <- ExpectCovarLinearStatistic(x, y, weights)
189s > KW <- quadformTestStatistic(linstat, expcov@expectation, expcov@covariance)
189s > kts <- kruskal.test(y ~ as.factor(x))$statistic
189s > stopifnot(isequal(KW, kts))
189s > 
189s > ### case 4: p > 1, q > 1 via chisq.test
189s > n <- 900
189s > xf <- gl(3, n / 3)
189s > yf <- gl(3, n / 3)[sample(1:n)]
189s > x <- sapply(levels(xf), function(l) as.numeric(xf == l))
189s > colnames(x) <- NULL
189s > y <- sapply(levels(yf), function(l) as.numeric(yf == l))
189s > colnames(y) <- NULL
189s > weights <- rep(1, n)
189s > linstat <- LinearStatistic(x, y, weights)
189s > expcov <- ExpectCovarLinearStatistic(x, y, weights)
189s > chi <- quadformTestStatistic(linstat, expcov@expectation, expcov@covariance)
189s > chis <- chisq.test(table(xf, yf))$statistic
189s > stopifnot(isequal(round(chi, 1), round(chis, 1)))
189s > 
189s > ### tests for function C_PermutedLinearStatistic
189s > ### Linear Statistics with permuted indices
189s > x <- matrix(rnorm(100), ncol = 2)
189s > y <- matrix(rnorm(100), ncol = 2)
189s > weights <- rep(1, 50)
189s > indx <- 1:50
189s > perm <- 1:50
189s > stopifnot(isequal(LinearStatistic(x, y, weights), 
189s +                   PermutedLinearStatistic(x, y, indx, perm)))
189s > x <- matrix(1:10000, ncol = 2)
189s > y <- matrix(1:10000, ncol = 2)
189s > 
189s > for (i in 1:100) {
189s +   indx <- sample(1:ncol(y), replace = TRUE)
189s +   perm <- sample(1:ncol(y), replace = TRUE)
189s + 
189s +   stopifnot(isequal(as.vector(t(x[indx,]) %*% y[perm, ]),
189s +                     PermutedLinearStatistic(x, y, indx, perm)))
189s + }
189s > 
189s BEGIN TEST Predict-regtest.R
189s 
189s R version 4.4.3 (2025-02-28) -- "Trophy Case"
189s Copyright (C) 2025 The R Foundation for Statistical Computing
189s Platform: s390x-ibm-linux-gnu
189s 
189s R is free software and comes with ABSOLUTELY NO WARRANTY.
189s You are welcome to redistribute it under certain conditions.
189s Type 'license()' or 'licence()' for distribution details.
189s 
189s R is a collaborative project with many contributors.
189s Type 'contributors()' for more information and
189s 'citation()' on how to cite R or R packages in publications.
189s 
189s Type 'demo()' for some demos, 'help()' for on-line help, or
189s 'help.start()' for an HTML browser interface to help.
189s Type 'q()' to quit R.
189s 
189s > 
189s > set.seed(290875)
189s > library("party")
189s Loading required package: grid
189s Loading required package: mvtnorm
189s Loading required package: modeltools
189s Loading required package: stats4
189s Loading required package: strucchange
189s Loading required package: zoo
189s 
189s Attaching package: ‘zoo’
189s 
189s The following objects are masked from ‘package:base’:
189s 
189s     as.Date, as.Date.numeric
189s 
189s Loading required package: sandwich
190s Loading required package: TH.data
190s > if (!require("TH.data"))
190s +     stop("cannot load package TH.data")
190s Loading required package: survival
190s Loading required package: MASS
190s > if (!require("coin"))
190s +     stop("cannot load package coin")
190s 
190s Attaching package: ‘TH.data’
190s 
190s The following object is masked from ‘package:MASS’:
190s 
190s     geyser
190s 
190s Loading required package: coin
190s > 
190s > ### get rid of the NAMESPACE
190s > attach(list2env(as.list(asNamespace("party"))))
190s The following objects are masked from package:party:
190s 
190s     cforest, cforest_classical, cforest_control, cforest_unbiased,
190s     conditionalTree, ctree, ctree_control, edge_simple,
190s     initVariableFrame, mob, mob_control, node_barplot, node_bivplot,
190s     node_boxplot, node_density, node_hist, node_inner,
190s     node_scatterplot, node_surv, node_terminal, nodes, party_intern,
190s     prettytree, proximity, ptrafo, response, reweight, sctest.mob,
190s     treeresponse, varimp, varimpAUC, where
190s 
190s > 
190s > data(treepipit, package = "coin")
190s > ct <- ctree(counts ~ ., data = treepipit)
190s > stopifnot(isequal(predict(ct), predict(ct, newdata = treepipit)))
190s > 
190s > 
190s > data(GlaucomaM, package = "TH.data")
190s > ct <- ctree(Class ~ ., data = GlaucomaM)
190s > stopifnot(isequal(predict(ct), predict(ct, newdata = GlaucomaM)))
190s > stopifnot(isequal(predict(ct, type = "prob"), predict(ct, type = "prob", 
190s +                   newdata = GlaucomaM)))
191s > stopifnot(isequal(predict(ct, type = "node"), predict(ct, type = "node", 
191s +                   newdata = GlaucomaM)))
191s > stopifnot(isequal(predict(ct, type = "prob"), treeresponse(ct)))
191s > 
191s > data("GBSG2", package = "TH.data")  
191s > 
191s > GBSG2tree <- ctree(Surv(time, cens) ~ ., data = GBSG2)
191s > stopifnot(isequal(GBSG2tree@predict_response(), 
191s +           GBSG2tree@predict_response(newdata = GBSG2)))
191s > stopifnot(isequal(GBSG2tree@cond_distr_response(), 
191s +           GBSG2tree@cond_distr_response(newdata = GBSG2)))
191s > 
191s > data("mammoexp", package = "TH.data")
191s > attr(mammoexp$ME, "scores") <- 1:3   
191s > attr(mammoexp$SYMPT, "scores") <- 1:4
191s > attr(mammoexp$DECT, "scores") <- 1:3 
191s > names(mammoexp)[names(mammoexp) == "SYMPT"] <- "symptoms"
191s > names(mammoexp)[names(mammoexp) == "PB"] <- "benefit"
191s > 
191s > names(mammoexp)
191s [1] "ME"       "symptoms" "benefit"  "HIST"     "BSE"      "DECT"    
191s > mtree <- ctree(ME ~ ., data = mammoexp)
191s > stopifnot(isequal(predict(mtree), predict(mtree, newdata = mammoexp)))
191s > stopifnot(isequal(predict(mtree), predict(mtree, newdata = mammoexp)))
191s > 
191s BEGIN TEST RandomForest-regtest.R
191s 
191s R version 4.4.3 (2025-02-28) -- "Trophy Case"
191s Copyright (C) 2025 The R Foundation for Statistical Computing
191s Platform: s390x-ibm-linux-gnu
191s 
191s R is free software and comes with ABSOLUTELY NO WARRANTY.
191s You are welcome to redistribute it under certain conditions.
191s Type 'license()' or 'licence()' for distribution details.
191s 
191s R is a collaborative project with many contributors.
191s Type 'contributors()' for more information and
191s 'citation()' on how to cite R or R packages in publications.
191s 
191s Type 'demo()' for some demos, 'help()' for on-line help, or
191s 'help.start()' for an HTML browser interface to help.
191s Type 'q()' to quit R.
191s 
191s > 
191s > RNGversion("3.5.2")
191s Warning message:
191s In RNGkind("Mersenne-Twister", "Inversion", "Rounding") :
191s   non-uniform 'Rounding' sampler used
191s > set.seed(290875)
191s > library("party")
191s Loading required package: grid
191s Loading required package: mvtnorm
191s Loading required package: modeltools
191s Loading required package: stats4
191s Loading required package: strucchange
191s Loading required package: zoo
191s 
191s Attaching package: ‘zoo’
191s 
191s The following objects are masked from ‘package:base’:
191s 
191s     as.Date, as.Date.numeric
191s 
191s Loading required package: sandwich
192s Loading required package: TH.data
192s > if (!require("TH.data"))
192s +     stop("cannot load package TH.data")
192s Loading required package: survival
192s Loading required package: MASS
192s 
192s Attaching package: ‘TH.data’
192s 
192s The following object is masked from ‘package:MASS’:
192s 
192s     geyser
192s 
192s Loading required package: coin
192s > if (!require("coin"))
192s +     stop("cannot load package coin")
192s > 
192s > data("GlaucomaM", package = "TH.data")
192s > rf <- cforest(Class ~ ., data = GlaucomaM, control = cforest_unbiased(ntree = 30))
192s > stopifnot(mean(GlaucomaM$Class != predict(rf)) < 
192s +           mean(GlaucomaM$Class != predict(rf, OOB = TRUE)))
192s > 
192s > data("GBSG2", package = "TH.data")
192s > rfS <- cforest(Surv(time, cens) ~ ., data = GBSG2, control = cforest_unbiased(ntree = 30))
192s > treeresponse(rfS, newdata = GBSG2[1:2,])
192s $`1`
192s Call: survfit(formula = y ~ 1, weights = weights)
192s 
192s      records  n events median 0.95LCL 0.95UCL
192s [1,]     146 30   15.9   1753    1481      NA
192s 
192s $`2`
192s Call: survfit(formula = y ~ 1, weights = weights)
192s 
192s      records  n events median 0.95LCL 0.95UCL
192s [1,]     148 30   13.4   1975    1343    2018
192s 
192s > 
192s > ### give it a try, at least
192s > varimp(rf, pre1.0_0 = TRUE)
192s            ag            at            as            an            ai 
192s  0.0000000000 -0.0023148148  0.0009259259  0.0009259259  0.0078703704 
192s           eag           eat           eas           ean           eai 
192s  0.0000000000  0.0000000000  0.0000000000  0.0013888889 -0.0009259259 
192s          abrg          abrt          abrs          abrn          abri 
192s  0.0000000000  0.0000000000  0.0032407407  0.0027777778  0.0041666667 
192s           hic          mhcg          mhct          mhcs          mhcn 
192s  0.0060185185  0.0000000000  0.0013888889 -0.0004629630  0.0027777778 
192s          mhci          phcg          phct          phcs          phcn 
192s  0.0078703704  0.0060185185  0.0000000000  0.0004629630  0.0018518519 
192s          phci           hvc          vbsg          vbst          vbss 
192s  0.0166666667  0.0032407407  0.0032407407  0.0013888889  0.0000000000 
192s          vbsn          vbsi          vasg          vast          vass 
192s  0.0000000000  0.0000000000  0.0000000000  0.0000000000  0.0000000000 
192s          vasn          vasi          vbrg          vbrt          vbrs 
192s  0.0000000000  0.0046296296  0.0000000000  0.0018518519  0.0004629630 
192s          vbrn          vbri          varg          vart          vars 
192s  0.0032407407  0.0004629630  0.0351851852  0.0000000000  0.0245370370 
192s          varn          vari           mdg           mdt           mds 
192s  0.0129629630  0.0481481481  0.0000000000  0.0000000000 -0.0013888889 
192s           mdn           mdi           tmg           tmt           tms 
192s  0.0000000000  0.0000000000  0.0273148148  0.0000000000  0.0097222222 
192s           tmn           tmi            mr           rnf          mdic 
192s -0.0023148148  0.0226851852  0.0000000000  0.0037037037  0.0055555556 
192s           emd            mv 
192s  0.0000000000 -0.0009259259 
192s > 
192s > P <- proximity(rf)
192s > stopifnot(max(abs(P - t(P))) == 0)
192s > 
192s > P[1:10,1:10]
192s            2         43        25         65         70         16          6
192s 2  1.0000000 0.26666667 0.7666667 0.20000000 0.10000000 0.13333333 0.70000000
192s 43 0.2666667 1.00000000 0.2000000 0.03333333 0.06666667 0.36666667 0.23333333
192s 25 0.7666667 0.20000000 1.0000000 0.26666667 0.10000000 0.10000000 0.76666667
192s 65 0.2000000 0.03333333 0.2666667 1.00000000 0.00000000 0.03333333 0.33333333
192s 70 0.1000000 0.06666667 0.1000000 0.00000000 1.00000000 0.23333333 0.06666667
192s 16 0.1333333 0.36666667 0.1000000 0.03333333 0.23333333 1.00000000 0.10000000
192s 6  0.7000000 0.23333333 0.7666667 0.33333333 0.06666667 0.10000000 1.00000000
192s 5  0.5333333 0.06666667 0.6000000 0.46666667 0.10000000 0.06666667 0.63333333
192s 12 0.5000000 0.06666667 0.5000000 0.50000000 0.10000000 0.06666667 0.53333333
192s 63 0.4666667 0.23333333 0.5000000 0.23333333 0.16666667 0.13333333 0.56666667
192s             5         12        63
192s 2  0.53333333 0.50000000 0.4666667
192s 43 0.06666667 0.06666667 0.2333333
192s 25 0.60000000 0.50000000 0.5000000
192s 65 0.46666667 0.50000000 0.2333333
192s 70 0.10000000 0.10000000 0.1666667
192s 16 0.06666667 0.06666667 0.1333333
192s 6  0.63333333 0.53333333 0.5666667
192s 5  1.00000000 0.83333333 0.4333333
192s 12 0.83333333 1.00000000 0.5000000
192s 63 0.43333333 0.50000000 1.0000000
192s > 
192s > ### variable importances
192s > a <- cforest(Species ~ ., data = iris,
192s +              control = cforest_unbiased(mtry = 2, ntree = 10))
192s > varimp(a, pre1.0_0 = TRUE)
192s Sepal.Length  Sepal.Width Petal.Length  Petal.Width 
192s   0.06181818   0.00000000   0.20727273   0.33636364 
192s > varimp(a, conditional = TRUE)
193s Sepal.Length  Sepal.Width Petal.Length  Petal.Width 
193s  0.007272727  0.000000000  0.103636364  0.243636364 
193s > 
193s > airq <- subset(airquality, complete.cases(airquality))
193s > a <- cforest(Ozone ~ ., data = airq,
193s +              control = cforest_unbiased(mtry = 2, ntree = 10))
193s > varimp(a, pre1.0_0 = TRUE)   
193s   Solar.R      Wind      Temp     Month       Day 
193s 137.76700 550.19004 295.40387  16.21802   5.42690 
193s > varimp(a, conditional = TRUE)
193s    Solar.R       Wind       Temp      Month        Day 
193s  67.713060 341.413307 227.670123   4.257196   3.204209 
193s > 
193s > data("mammoexp", package = "TH.data")
193s > a <- cforest(ME ~ ., data = mammoexp, control = cforest_classical(ntree = 10))
193s > varimp(a, pre1.0_0 = TRUE)   
193s      SYMPT         PB       HIST        BSE       DECT 
193s 0.02466021 0.01046237 0.01607246 0.01045324 0.00133305 
193s > varimp(a, conditional = TRUE)
193s       SYMPT          PB        HIST         BSE        DECT 
193s 0.019882337 0.009532482 0.006163146 0.007732481 0.003382481 
193s > 
193s > stopifnot(all.equal(unique(sapply(a@weights, sum)), nrow(mammoexp)))
193s > 
193s > ### check user-defined weights
193s > nobs <- nrow(GlaucomaM)
193s > i <- rep(0.0, nobs)
193s > i[1:floor(.632 * nobs)] <- 1
193s > folds <- replicate(100, sample(i))
193s > rf2 <- cforest(Class ~ ., data = GlaucomaM, control = cforest_unbiased(ntree = 100), weights = folds)
193s > table(predict(rf), predict(rf2))
193s           
193s            glaucoma normal
193s   glaucoma       89      4
193s   normal          1    102
193s > 
193s BEGIN TEST TestStatistic-regtest.R
193s 
193s R version 4.4.3 (2025-02-28) -- "Trophy Case"
193s Copyright (C) 2025 The R Foundation for Statistical Computing
193s Platform: s390x-ibm-linux-gnu
193s 
193s R is free software and comes with ABSOLUTELY NO WARRANTY.
193s You are welcome to redistribute it under certain conditions.
193s Type 'license()' or 'licence()' for distribution details.
193s 
193s R is a collaborative project with many contributors.
193s Type 'contributors()' for more information and
193s 'citation()' on how to cite R or R packages in publications.
193s 
193s Type 'demo()' for some demos, 'help()' for on-line help, or
193s 'help.start()' for an HTML browser interface to help.
193s Type 'q()' to quit R.
193s 
194s > 
194s > set.seed(290875)
194s > library("party")
194s Loading required package: grid
194s Loading required package: mvtnorm
194s Loading required package: modeltools
194s Loading required package: stats4
194s Loading required package: strucchange
194s Loading required package: zoo
195s 
195s Attaching package: ‘zoo’
195s 
195s > 
195s > ### get rid of the NAMESPACE
195s > attach(list2env(as.list(asNamespace("party"))))
195s The following objects are masked from ‘package:base’:
195s 
195s     as.Date, as.Date.numeric
195s 
195s Loading required package: sandwich
195s The following objects are masked from package:party:
195s 
195s     cforest, cforest_classical, cforest_control, cforest_unbiased,
195s     conditionalTree, ctree, ctree_control, edge_simple,
195s     initVariableFrame, mob, mob_control, node_barplot, node_bivplot,
195s     node_boxplot, node_density, node_hist, node_inner,
195s     node_scatterplot, node_surv, node_terminal, nodes, party_intern,
195s     prettytree, proximity, ptrafo, response, reweight, sctest.mob,
195s     treeresponse, varimp, varimpAUC, where
195s 
195s Loading required package: grid
195s Loading required package: mvtnorm
195s Loading required package: modeltools
195s Loading required package: stats4
195s Loading required package: strucchange
195s Loading required package: zoo
195s > 
195s > ### 
195s > ###
195s > ###    Regression tests for test statistics
195s > ###    
195s > ###    functions defined in file `./src/TestStatistic.c'    
195s > 
195s > ### tests for function C_maxabsTeststatistic
195s > xf <- gl(3, 10)
195s > yf <- gl(3, 10)[sample(1:30)]
195s > x <- sapply(levels(xf), function(l) as.numeric(xf == l))
195s > colnames(x) <- NULL
195s > y <- sapply(levels(yf), function(l) as.numeric(yf == l))
195s > colnames(y) <- NULL
195s > weights <- sample(1:30)
195s > linstat <- LinearStatistic(x, y, weights) 
195s > expcov <- ExpectCovarLinearStatistic(x, y, weights)
195s > maxabs <- max(abs(linstat - expcov@expectation) / sqrt(diag(expcov@covariance)))
195s > stopifnot(isequal(maxabs, 
195s +     maxabsTestStatistic(linstat, expcov@expectation, expcov@covariance, 1e-10)))
195s > expcov@covariance[1,1] <- 1e-12
195s > stopifnot(isequal(maxabs,
195s +     maxabsTestStatistic(linstat, expcov@expectation, expcov@covariance, 1e-10)))
195s > 
195s > ### tests for function C_quadformTeststatistic
195s > ### -> see LinearStatistic-regtest.R
195s > 
195s > 
195s BEGIN TEST TreeGrow-regtest.R
195s 
195s R version 4.4.3 (2025-02-28) -- "Trophy Case"
195s Copyright (C) 2025 The R Foundation for Statistical Computing
195s Platform: s390x-ibm-linux-gnu
195s 
195s R is free software and comes with ABSOLUTELY NO WARRANTY.
195s You are welcome to redistribute it under certain conditions.
195s Type 'license()' or 'licence()' for distribution details.
195s 
195s R is a collaborative project with many contributors.
195s Type 'contributors()' for more information and
195s 'citation()' on how to cite R or R packages in publications.
195s 
195s Type 'demo()' for some demos, 'help()' for on-line help, or
195s 'help.start()' for an HTML browser interface to help.
195s Type 'q()' to quit R.
195s 
195s > 
195s > set.seed(290875)
195s > library("party")
195s 
195s Attaching package: ‘zoo’
195s 
195s The following objects are masked from ‘package:base’:
195s 
195s     as.Date, as.Date.numeric
195s 
195s Loading required package: sandwich
196s > if (!require("TH.data"))
196s +     stop("cannot load package TH.data")
196s Loading required package: TH.data
196s Loading required package: survival
196s Loading required package: MASS
196s 
196s Attaching package: ‘TH.data’
196s 
196s The following object is masked from ‘package:MASS’:
196s 
196s     geyser
196s 
196s > if (!require("coin"))
196s +     stop("cannot load package coin")
196s Loading required package: coin
196s > 
196s > ### get rid of the NAMESPACE
196s > attach(list2env(as.list(asNamespace("party"))))
196s > 
196s > gtctrl <- new("GlobalTestControl")
196s > tlev <- levels(gtctrl@testtype)
196s > 
196s > data(GlaucomaM, package = "TH.data")
196s > gtree <- ctree(Class ~ ., data = GlaucomaM)
196s The following objects are masked from package:party:
196s 
196s     cforest, cforest_classical, cforest_control, cforest_unbiased,
196s     conditionalTree, ctree, ctree_control, edge_simple,
196s     initVariableFrame, mob, mob_control, node_barplot, node_bivplot,
196s     node_boxplot, node_density, node_hist, node_inner,
196s     node_scatterplot, node_surv, node_terminal, nodes, party_intern,
196s     prettytree, proximity, ptrafo, response, reweight, sctest.mob,
196s     treeresponse, varimp, varimpAUC, where
196s 
196s > tree <- gtree@tree
196s > stopifnot(isequal(tree[[5]][[3]], 0.059))
196s > predict(gtree)
196s   [1] normal   normal   normal   normal   normal   normal   normal   normal  
196s   [9] normal   normal   normal   glaucoma normal   normal   normal   normal  
196s  [17] normal   normal   normal   normal   normal   normal   normal   normal  
196s  [25] normal   normal   normal   normal   normal   normal   normal   normal  
196s  [33] normal   normal   glaucoma normal   normal   normal   normal   normal  
196s  [41] normal   normal   glaucoma normal   normal   normal   normal   normal  
196s  [49] normal   normal   normal   normal   normal   normal   normal   normal  
196s  [57] normal   normal   normal   normal   normal   normal   normal   normal  
196s  [65] normal   normal   normal   normal   normal   glaucoma normal   normal  
196s  [73] normal   normal   normal   normal   normal   normal   normal   normal  
196s  [81] glaucoma normal   normal   normal   normal   normal   normal   normal  
196s  [89] normal   normal   normal   normal   normal   normal   normal   normal  
196s  [97] normal   normal   glaucoma glaucoma glaucoma glaucoma normal   normal  
196s [105] normal   normal   normal   glaucoma glaucoma normal   glaucoma glaucoma
196s [113] glaucoma glaucoma glaucoma glaucoma glaucoma normal   normal   glaucoma
196s [121] glaucoma glaucoma glaucoma glaucoma glaucoma glaucoma normal   glaucoma
196s [129] normal   glaucoma normal   glaucoma glaucoma glaucoma glaucoma glaucoma
196s [137] glaucoma glaucoma glaucoma glaucoma glaucoma glaucoma glaucoma glaucoma
196s [145] glaucoma glaucoma normal   glaucoma glaucoma glaucoma glaucoma normal  
196s [153] glaucoma glaucoma glaucoma glaucoma normal   glaucoma glaucoma glaucoma
196s [161] glaucoma glaucoma normal   normal   glaucoma glaucoma normal   glaucoma
196s [169] glaucoma glaucoma glaucoma glaucoma normal   glaucoma glaucoma glaucoma
196s [177] normal   glaucoma normal   glaucoma glaucoma glaucoma normal   glaucoma
196s [185] glaucoma glaucoma normal   glaucoma glaucoma normal   glaucoma normal  
196s [193] glaucoma glaucoma glaucoma glaucoma
196s Levels: glaucoma normal
196s > 
196s > # print(tree)
196s > 
196s > stump <- ctree(Class ~ ., data = GlaucomaM, 
196s +                control = ctree_control(stump = TRUE))
196s > print(stump)
196s 
196s 	 Conditional inference tree with 2 terminal nodes
196s 
196s Response:  Class 
196s Inputs:  ag, at, as, an, ai, eag, eat, eas, ean, eai, abrg, abrt, abrs, abrn, abri, hic, mhcg, mhct, mhcs, mhcn, mhci, phcg, phct, phcs, phcn, phci, hvc, vbsg, vbst, vbss, vbsn, vbsi, vasg, vast, vass, vasn, vasi, vbrg, vbrt, vbrs, vbrn, vbri, varg, vart, vars, varn, vari, mdg, mdt, mds, mdn, mdi, tmg, tmt, tms, tmn, tmi, mr, rnf, mdic, emd, mv 
196s Number of observations:  196 
196s 
196s 1) vari <= 0.059; criterion = 1, statistic = 71.475
196s   2)*  weights = 87 
196s 1) vari > 0.059
196s   3)*  weights = 109 
196s > 
196s > data(treepipit, package = "coin")
196s > 
196s > tr <- ctree(counts ~ ., data = treepipit)
196s > tr
196s 
196s 	 Conditional inference tree with 2 terminal nodes
196s 
196s Response:  counts 
196s Inputs:  age, coverstorey, coverregen, meanregen, coniferous, deadtree, cbpiles, ivytree, fdist 
196s Number of observations:  86 
196s 
196s 1) coverstorey <= 40; criterion = 0.998, statistic = 13.678
196s   2)*  weights = 24 
196s 1) coverstorey > 40
196s   3)*  weights = 62 
196s > plot(tr)
196s > 
196s > 
196s > data(GlaucomaM, package = "TH.data")
196s > 
196s > tr <- ctree(Class ~ ., data = GlaucomaM)
196s > tr
196s 
196s 	 Conditional inference tree with 4 terminal nodes
196s 
196s Response:  Class 
196s Inputs:  ag, at, as, an, ai, eag, eat, eas, ean, eai, abrg, abrt, abrs, abrn, abri, hic, mhcg, mhct, mhcs, mhcn, mhci, phcg, phct, phcs, phcn, phci, hvc, vbsg, vbst, vbss, vbsn, vbsi, vasg, vast, vass, vasn, vasi, vbrg, vbrt, vbrs, vbrn, vbri, varg, vart, vars, varn, vari, mdg, mdt, mds, mdn, mdi, tmg, tmt, tms, tmn, tmi, mr, rnf, mdic, emd, mv 
196s Number of observations:  196 
196s 
196s 1) vari <= 0.059; criterion = 1, statistic = 71.475
196s   2) vasg <= 0.066; criterion = 1, statistic = 29.265
196s     3)*  weights = 79 
196s   2) vasg > 0.066
196s     4)*  weights = 8 
196s 1) vari > 0.059
196s   5) tms <= -0.066; criterion = 0.951, statistic = 11.221
196s     6)*  weights = 65 
196s   5) tms > -0.066
196s     7)*  weights = 44 
196s > plot(tr)
196s > 
196s > data(GBSG2, package = "TH.data")  
196s > 
196s > GBSG2tree <- ctree(Surv(time, cens) ~ ., data = GBSG2)
196s > GBSG2tree
196s 
196s 	 Conditional inference tree with 4 terminal nodes
196s 
196s Response:  Surv(time, cens) 
196s Inputs:  horTh, age, menostat, tsize, tgrade, pnodes, progrec, estrec 
196s Number of observations:  686 
196s 
196s 1) pnodes <= 3; criterion = 1, statistic = 56.156
196s   2) horTh == {yes}; criterion = 0.965, statistic = 8.113
196s     3)*  weights = 128 
196s   2) horTh == {no}
196s     4)*  weights = 248 
196s 1) pnodes > 3
196s   5) progrec <= 20; criterion = 0.999, statistic = 14.941
196s     6)*  weights = 144 
196s   5) progrec > 20
196s     7)*  weights = 166 
196s > plot(GBSG2tree)
196s > plot(GBSG2tree, terminal_panel = node_surv(GBSG2tree))
196s > survfit(Surv(time, cens) ~ as.factor(GBSG2tree@where), data = GBSG2)
196s Call: survfit(formula = Surv(time, cens) ~ as.factor(GBSG2tree@where), 
196s     data = GBSG2)
196s 
196s                                n events median 0.95LCL 0.95UCL
196s as.factor(GBSG2tree@where)=3 128     31     NA    2372      NA
196s as.factor(GBSG2tree@where)=4 248     88   2093    1814      NA
196s as.factor(GBSG2tree@where)=6 144    103    624     525     797
196s as.factor(GBSG2tree@where)=7 166     77   1701    1174    2018
196s > names(GBSG2)
196s  [1] "horTh"    "age"      "menostat" "tsize"    "tgrade"   "pnodes"  
196s  [7] "progrec"  "estrec"   "time"     "cens"    
196s > 
196s > tr <- ctree(Surv(time, cens) ~ ., data = GBSG2, 
196s +             control = ctree_control(teststat = "max", 
196s +                                     testtype = "Univariate"))
196s > tr
196s There were 18 warnings (use warnings() to see them)
196s 
196s 	 Conditional inference tree with 10 terminal nodes
196s 
196s Response:  Surv(time, cens) 
196s Inputs:  horTh, age, menostat, tsize, tgrade, pnodes, progrec, estrec 
196s Number of observations:  686 
196s 
196s 1) pnodes <= 3; criterion = 1, statistic = 7.494
196s   2) horTh == {yes}; criterion = 0.996, statistic = 2.848
196s     3) progrec <= 74; criterion = 0.975, statistic = 2.241
196s       4)*  weights = 73 
196s     3) progrec > 74
196s       5)*  weights = 55 
196s   2) horTh == {no}
196s     6) menostat == {Pre}; criterion = 0.978, statistic = 2.286
196s       7) age <= 37; criterion = 1, statistic = 3.858
196s         8)*  weights = 21 
196s       7) age > 37
196s         9)*  weights = 115 
196s     6) menostat == {Post}
196s       10)*  weights = 112 
196s 1) pnodes > 3
196s   11) progrec <= 20; criterion = 1, statistic = 3.865
196s     12) pnodes <= 9; criterion = 0.991, statistic = 2.612
196s       13)*  weights = 87 
196s     12) pnodes > 9
196s       14)*  weights = 57 
196s   11) progrec > 20
196s     15) horTh == {yes}; criterion = 0.976, statistic = 2.251
196s       16) menostat == {Pre}; criterion = 0.965, statistic = 2.105
196s         17)*  weights = 20 
196s       16) menostat == {Post}
196s         18)*  weights = 45 
196s     15) horTh == {no}
196s       19)*  weights = 101 
196s > plot(tr)
196s > 
196s > data("mammoexp", package = "TH.data")
196s > attr(mammoexp$ME, "scores") <- 1:3   
196s > attr(mammoexp$SYMPT, "scores") <- 1:4
196s > attr(mammoexp$DECT, "scores") <- 1:3 
196s > names(mammoexp)[names(mammoexp) == "SYMPT"] <- "symptoms"
196s > names(mammoexp)[names(mammoexp) == "PB"] <- "benefit"
196s > 
196s > names(mammoexp)
196s [1] "ME"       "symptoms" "benefit"  "HIST"     "BSE"      "DECT"    
196s > tr <- ctree(ME ~ ., data = mammoexp)
196s > tr
196s 
196s 	 Conditional inference tree with 3 terminal nodes
196s 
196s Response:  ME 
196s Inputs:  symptoms, benefit, HIST, BSE, DECT 
196s Number of observations:  412 
196s 
196s 1) symptoms <= Agree; criterion = 1, statistic = 29.933
196s   2)*  weights = 113 
196s 1) symptoms > Agree
196s   3) benefit <= 8; criterion = 0.988, statistic = 9.17
196s     4)*  weights = 208 
196s   3) benefit > 8
196s     5)*  weights = 91 
196s > plot(tr)
196s > 
196s > treeresponse(tr, newdata = mammoexp[1:5,])
196s [[1]]
196s [1] 0.3990385 0.3798077 0.2211538
196s 
196s [[2]]
196s [1] 0.84070796 0.05309735 0.10619469
196s 
196s [[3]]
196s [1] 0.3990385 0.3798077 0.2211538
196s 
196s [[4]]
196s [1] 0.6153846 0.2087912 0.1758242
196s 
196s [[5]]
196s [1] 0.3990385 0.3798077 0.2211538
196s 
196s > 
196s > ### check different user interfaces
196s > data("iris")
196s > x <- as.matrix(iris[,colnames(iris) != "Species"])
196s > y <- iris[,"Species"]
196s > newx <- x
196s > 
196s > ls <- LearningSample(x, y)
196s > p1 <- unlist(treeresponse(ctree(Species ~ ., data = iris), newdata = as.data.frame(newx)))
196s > p2 <- unlist(treeresponse(ctreefit(ls, control = ctree_control()), newdata = as.matrix(newx)))
196s > stopifnot(identical(max(abs(p1 - p2)), 0))
196s > 
196s > set.seed(29)
196s > p1 <- unlist(treeresponse(cforestfit(ls, control = cforest_unbiased(mtry = 1)), newdata = as.matrix(newx)))
197s > set.seed(29)
197s > p2 <- unlist(treeresponse(cforest(Species ~ ., data = iris, control = cforest_unbiased(mtry = 1)), 
197s +              newdata = as.data.frame(newx)))
197s > stopifnot(identical(max(abs(p1 - p2)), 0))
197s > 
197s BEGIN TEST Utils-regtest.R
197s 
197s R version 4.4.3 (2025-02-28) -- "Trophy Case"
197s Copyright (C) 2025 The R Foundation for Statistical Computing
197s Platform: s390x-ibm-linux-gnu
197s 
197s R is free software and comes with ABSOLUTELY NO WARRANTY.
197s You are welcome to redistribute it under certain conditions.
197s Type 'license()' or 'licence()' for distribution details.
197s 
197s R is a collaborative project with many contributors.
197s Type 'contributors()' for more information and
197s 'citation()' on how to cite R or R packages in publications.
197s 
197s Type 'demo()' for some demos, 'help()' for on-line help, or
197s 'help.start()' for an HTML browser interface to help.
197s Type 'q()' to quit R.
197s 
197s > 
197s > set.seed(290875)
197s > library("party")
197s Loading required package: grid
197s Loading required package: mvtnorm
197s Loading required package: modeltools
197s Loading required package: stats4
197s Loading required package: strucchange
197s Loading required package: zoo
197s 
197s Attaching package: ‘zoo’
197s 
197s The following objects are masked from ‘package:base’:
197s 
197s     as.Date, as.Date.numeric
197s 
197s Loading required package: sandwich
198s > if (!require("MASS", quietly = TRUE))
198s +     stop("cannot load package MASS")
198s > 
198s > ### get rid of the NAMESPACE
198s > attach(list2env(as.list(asNamespace("party"))))
198s The following objects are masked from package:party:
198s 
198s     cforest, cforest_classical, cforest_control, cforest_unbiased,
198s     conditionalTree, ctree, ctree_control, edge_simple,
198s     initVariableFrame, mob, mob_control, node_barplot, node_bivplot,
198s     node_boxplot, node_density, node_hist, node_inner,
198s     node_scatterplot, node_surv, node_terminal, nodes, party_intern,
198s     prettytree, proximity, ptrafo, response, reweight, sctest.mob,
198s     treeresponse, varimp, varimpAUC, where
198s 
198s > 
198s > ###
198s > ###
198s > ###    Regression tests for utility functions
198s > ###
198s > ###    functions defined in file ./src/Utils.c'
198s > ###
198s > ###
198s > 
198s > ### tests for function C_kronecker
198s > for (i in 1:10) {
198s +     A = matrix(rnorm(i*5), ncol = i, nrow = 5)
198s +     B = matrix(rnorm(i*10), ncol = 10, nrow = i)
198s +     Rkr = kronecker(A, B)
198s +     mykr = .Call(R_kronecker, A, B)
198s +     stopifnot(isequal(Rkr, mykr))
198s + }
198s > 
198s > ### test for function CR_svd (singular value decomposition)
198s > x <- matrix(rnorm(100), ncol = 10)
198s > x <- t(x) %*% x
198s > svdx <- qsvd(x)
198s > stopifnot(isequal(svd(x)$d, svdx$d))
198s > stopifnot(isequal(svd(x)$u, svdx$u))
198s > stopifnot(isequal(svd(x)$v, t(svdx$vt)))
198s > 
198s > ### test for function R_MPinv (Moore-Penrose inverse)
198s > mpinvx <- MPinv(x)
198s > stopifnot(isequal(mpinvx, ginv(x)))
198s > 
198s > ### test for function C_max
198s > y <- rnorm(1000)
198s > stopifnot(isequal(max(y), .Call(R_max, y)))
198s > 
198s > ### test for function C_abs
198s > y <- rnorm(1000)
198s > stopifnot(isequal(abs(y), .Call(R_abs, y)))
198s > 
198s > ### tests for function C_matprod{T}
198s > x <- matrix(rnorm(100), ncol = 4)
198s > y <- matrix(rnorm(40), nrow = 4)
198s > stopifnot(isequal(x %*% y, 
198s +                   .Call(R_matprod, x, y)))
198s > x <- matrix(rnorm(100), ncol = 20)
198s > y <- matrix(rnorm(200), ncol = 20)
198s > stopifnot(isequal(x %*% t(y), 
198s +                   .Call(R_matprodT, x, y)))
198s > 
198s > ### test for function C_SampleNoReplace
198s > ### permutation case
198s > m <- 10000
198s > storage.mode(m) <- "integer"
198s > perm <- .Call(R_permute, m) + 1 
198s > stopifnot(all(sort(perm) == (1:m)))
198s > 
198s > ### the random subset case
198s > k <- 100
198s > storage.mode(k) <- "integer"
198s > perm <- .Call(R_rsubset, m, k) + 1 
198s > stopifnot(all(perm %in% (1:m)))
198s > 
198s BEGIN TEST bugfixes.R
198s 
198s R version 4.4.3 (2025-02-28) -- "Trophy Case"
198s Copyright (C) 2025 The R Foundation for Statistical Computing
198s Platform: s390x-ibm-linux-gnu
198s 
198s R is free software and comes with ABSOLUTELY NO WARRANTY.
198s You are welcome to redistribute it under certain conditions.
198s Type 'license()' or 'licence()' for distribution details.
198s 
198s R is a collaborative project with many contributors.
198s Type 'contributors()' for more information and
198s 'citation()' on how to cite R or R packages in publications.
198s 
198s Type 'demo()' for some demos, 'help()' for on-line help, or
198s 'help.start()' for an HTML browser interface to help.
198s Type 'q()' to quit R.
198s 
198s > 
198s > RNGversion("3.5.2")
198s Warning message:
198s In RNGkind("Mersenne-Twister", "Inversion", "Rounding") :
198s   non-uniform 'Rounding' sampler used
198s > set.seed(290875)
198s > library("party")
198s Loading required package: grid
198s Loading required package: mvtnorm
198s Loading required package: modeltools
198s Loading required package: stats4
198s Loading required package: strucchange
198s Loading required package: zoo
198s 
198s Attaching package: ‘zoo’
198s 
198s The following objects are masked from ‘package:base’:
198s 
198s     as.Date, as.Date.numeric
198s 
198s Loading required package: sandwich
199s > library("survival")
199s > 
199s > ### get rid of the NAMESPACE
199s > attach(list2env(as.list(asNamespace("party"))))
199s The following objects are masked from package:party:
199s 
199s     cforest, cforest_classical, cforest_control, cforest_unbiased,
199s     conditionalTree, ctree, ctree_control, edge_simple,
199s     initVariableFrame, mob, mob_control, node_barplot, node_bivplot,
199s     node_boxplot, node_density, node_hist, node_inner,
199s     node_scatterplot, node_surv, node_terminal, nodes, party_intern,
199s     prettytree, proximity, ptrafo, response, reweight, sctest.mob,
199s     treeresponse, varimp, varimpAUC, where
199s 
199s > 
199s > ### check nominal level printing
199s > set.seed(290875)
199s > x <- gl(5, 50)
199s > df <- data.frame(y = c(rnorm(50, 0), rnorm(50, 1), rnorm(50, 2), rnorm(50, 3), rnorm(50, 4)), 
199s +                  x = x, z = rnorm(250))
199s > ctree(y ~ x, data = df)
199s 
199s 	 Conditional inference tree with 5 terminal nodes
199s 
199s Response:  y 
199s Input:  x 
199s Number of observations:  250 
199s 
199s 1) x == {3, 4, 5}; criterion = 1, statistic = 159.215
199s   2) x == {4, 5}; criterion = 1, statistic = 54.696
199s     3) x == {5}; criterion = 1, statistic = 16.711
199s       4)*  weights = 50 
199s     3) x == {4}
199s       5)*  weights = 50 
199s   2) x == {3}
199s     6)*  weights = 50 
199s 1) x == {1, 2}
199s   7) x == {2}; criterion = 1, statistic = 21.738
199s     8)*  weights = 50 
199s   7) x == {1}
199s     9)*  weights = 50 
199s > 
199s > ### check asymptotic vs. MonteCarlo, especially categorical splits after
199s > ### MonteCarlo resampling
199s > a <- ctree(y ~ x + z, data = df, control = ctree_control(stump = TRUE))
199s > b <- ctree(y ~ x + z, data = df,
199s +            control =  ctree_control(testtype = "Monte", stump = TRUE))
199s > stopifnot(isequal(a@tree$psplit, b@tree$psplit))  
199s > stopifnot(isequal(a@tree$criterion$statistic, b@tree$criterion$statistic))
199s > 
199s > ### we did not check the hyper parameters
199s > try(cforest_control(minsplit = -1))
199s > try(cforest_control(ntree = -1))
199s > try(cforest_control(maxdepth = -1))
199s > try(cforest_control(nresample = 10))
199s > 
199s > ### NA handling for factors and in random forest
199s > ### more than one (ordinal) response variable
199s > xo <- ordered(x)
199s > x[sample(1:length(x), 10)] <- NA
199s > cforest(y + xo ~ x + z, data = df, 
199s +         control = cforest_unbiased(ntree = 50))
199s Error in validObject(object@splitctrl) : 
199s   invalid class “SplitControl” object: FALSE
199s In addition: Warning message:
199s In validityMethod(object) :
199s   no negative values allowed in objects of class ‘SplitControl’
199s Error in validObject(RET) : invalid class “ForestControl” object: FALSE
199s In addition: Warning message:
199s In validityMethod(object) : ‘ntree’ must be equal or greater 1
199s Error in validObject(object@tgctrl) : 
199s   invalid class “TreeGrowControl” object: FALSE
199s In addition: Warning message:
199s In validityMethod(object) : ‘maxdepth’ must be positive
199s Error in validObject(object@gtctrl) : 
199s   invalid class “GlobalTestControl” object: FALSE
199s In addition: Warning message:
199s In validityMethod(object) : ‘nresample’ must be larger than 100
200s There were 50 or more warnings (use warnings() to see the first 50)
200s 	 Random Forest using Conditional Inference Trees
200s 
200s Number of trees:  50 
200s 
200s Responses: y, xo 
200s Inputs:  x, z 
200s Number of observations:  250 
200s 
200s > 
200s > ### make sure minsplit is OK in the presence of missing values
200s > ### spotted by Han Lee <Han.Lee@GeodeCapital.com>
200s > load("t1.RData")
200s 
200s > tr <- try(ctree(p ~., data = t1))
200s > stopifnot(!inherits(tr, "try-error"))
200s > 
200s > ### make sure number of surrogate splits exceeds number of inputs by 1
200s > ### spotted by Henric Nilsson <henric.nilsson@phadia.com>
200s > airq <- subset(airquality, !is.na(Ozone))
200s > tr <- try(ctree(Ozone ~ Wind, data = airq,
200s +           controls = ctree_control(maxsurrogate = 3)))
200s > stopifnot(inherits(tr, "try-error"))
200s > 
200s > ### ctree() used only the first of a multivariate response
200s > ### spotted by Henric Nilsson <henric.nilsson@phadia.com>
200s > airq <- subset(airquality, complete.cases(Ozone, Solar.R))
200s > airOzoSol1 <- ctree(Ozone + Solar.R ~ Wind + Temp + Month + Day,
200s +                     data = airq)
200s Error in model@fit(data, ...) : 
200s   cannot set up 3 surrogate splits with only 0 ordered input variable(s)
200s > airOzoSol2 <- ctree(Solar.R + Ozone ~ Wind + Temp + Month + Day,
200s +                     data = airq)
200s > stopifnot(isequal(airOzoSol1@where, airOzoSol2@where))
200s > 
200s > ### one variable with all values missing
200s > dat <- data.frame(y = rnorm(100), x1 = runif(100), x2 = rep(NA, 100))
200s > ctree(y ~ x1 + x2, data = dat)
200s 
200s 	 Conditional inference tree with 1 terminal nodes
200s 
200s Response:  y 
200s Inputs:  x1, x2 
200s Number of observations:  100 
200s 
200s 1)*  weights = 100 
200s > 
200s > ### one factor with only one level
200s > dat$x2 <- factor(rep(0, 100))
200s > try(ctree(y ~ x1 + x2, data = dat))
200s 
200s 	 Conditional inference tree with 1 terminal nodes
200s 
200s Response:  y 
200s Inputs:  x1, x2 
200s Number of observations:  100 
200s 
200s 1)*  weights = 100 
200s > 
200s > ### weights for sampling without replacement for cforest
200s > ### spotted by Carolin Strobl <carolin.strol@stat.uni-muenchen.de>
200s > airq <- subset(airquality, !is.na(Ozone))
200s > cctrl <- cforest_control(replace = FALSE, fraction = 0.5)
200s > n <- nrow(airq)
200s > w <- double(n)
200s > 
200s > 
200s > if (FALSE) {
200s + ### forest objects have weights remove in 0.9-13
200s + 
200s + ### case weights
200s + x <- runif(w)
200s + w[x > 0.5] <- 1
200s + w[x > 0.9] <- 2
200s + 
200s + rf <- cforest(Ozone ~ .,data = airq, weights = w, control = cctrl)
200s + rfw <- sapply(rf@ensemble, function(x) x[[2]])
200s + stopifnot(all(colSums(rfw) == ceiling(sum(w) / 2)))
200s + stopifnot(max(abs(rfw[w == 0,])) == 0)
200s + 
200s + ### real weights
200s + w <- runif(n)
200s + w[1:10] <- 0
200s + rf <- cforest(Ozone ~ .,data = airq, weights = w, control = cctrl)
200s + rfw <- sapply(rf@ensemble, function(x) x[[2]])
200s + stopifnot(all(colSums(rfw) == ceiling(sum(w > 0) / 2)))
200s + stopifnot(max(abs(rfw[w == 0,])) == 0)
200s + }
200s > 
200s > ### cforest with multivariate response
200s > df <- data.frame(y1 = rnorm(100), y2 = rnorm(100), x1 = runif(100), x2 = runif(100))
200s > df$y1[df$x1 < 0.5] <- df$y1[df$x1 < 0.5] + 1
200s > cf <- cforest(y1 + y2 ~ x1 + x2, data = df)
200s There were 50 or more warnings (use warnings() to see the first 50)
200s > pr <- predict(cf)
200s > stopifnot(length(pr) == nrow(df) || lengthl(pr[[1]]) != 2)
200s > 
200s > ### varimp with ordered response
200s > ### spotted by Max Kuhn <Max.Kuhn@pfizer.com>
200s > data("mammoexp", package = "TH.data")
200s > test <- cforest(ME ~ ., data = mammoexp, control = cforest_unbiased(ntree = 50))
200s > stopifnot(sum(abs(varimp(test))) > 0)
200s > 
200s > ### missing values in factors lead to segfaults on 64 bit systems
200s > ### spotted by Carolin Strobl <carolin.strobl@lme.de>
200s > y <- rnorm(100)
200s > x <- gl(2, 50)
200s > z <- gl(2, 50)[sample(1:100)]
200s > y <- y + (x == "1") * 3
200s > xNA <- x
200s > xNA[1:2] <- NA
200s > ctree(y ~ xNA )
200s 
200s 	 Conditional inference tree with 2 terminal nodes
200s 
200s Response:  y 
200s Input:  xNA 
200s Number of observations:  100 
200s 
200s 1) xNA == {1}; criterion = 1, statistic = 72.566
200s   2)*  weights = 48 
200s 1) xNA == {2}
200s   3)*  weights = 52 
200s > 
200s > 
200s > y <- rnorm(100)
200s > x <- y + rnorm(100, sd = 0.1)
200s > 
200s > tmp <- data.frame(x, y)
200s > 
200s > x[sample(1:100)[1:10]] <- NA
200s > 
200s > ct1 <- ctree(y ~ x, data = tmp)
200s > ct2 <- ctree(y ~ x, data = tmp[complete.cases(tmp),])
200s > w <- as.double(complete.cases(tmp))
200s > ct3 <- ctree(y ~ x, data = tmp, weights = w)
200s > 
200s > xx <- data.frame(x = rnorm(100))
200s > t1 <- max(abs(predict(ct2, newdata = xx) - predict(ct3, newdata = xx))) == 0
200s > t2 <- nterminal(ct1@tree) == nterminal(ct2@tree)
200s > t3 <- nterminal(ct3@tree) == nterminal(ct1@tree)
200s > t4 <- all.equal(ct2@tree$psplit, ct1@tree$psplit)
200s > stopifnot(t1 && t2 && t3 && t4)
200s > 
200s > y <- rnorm(100)
200s > x <- cut(y, c(-Inf, -1, 0, 1, Inf))
200s > 
200s > tmp <- data.frame(x, y)
200s > 
200s > x[sample(1:100)[1:10]] <- NA
200s > 
200s > ct1 <- ctree(y ~ x, data = tmp)
200s > ct2 <- ctree(y ~ x, data = tmp[complete.cases(tmp),])
200s > w <- as.double(complete.cases(tmp))
200s > ct3 <- ctree(y ~ x, data = tmp, weights = w)
200s > 
200s > stopifnot(all.equal(ct2@tree$psplit, ct1@tree$psplit))
200s > stopifnot(all.equal(ct2@tree$psplit, ct3@tree$psplit))
200s > 
200s > ### predictions for obs with zero weights
200s > ### spotted by Mark Difford <mark_difford@yahoo.co.uk>
200s > airq <- subset(airquality, !is.na(Ozone))
200s > w <- rep(1, nrow(airq))
200s > w[1:5] <- 0
200s > 
200s > ctw <- ctree(Ozone ~ ., data = airq, weights = w)
200s > stopifnot(all.equal(predict(ctw)[1:5], predict(ctw, newdata = airq)[1:5]))
200s > rfw <- cforest(Ozone ~ ., data = airq, weights = w)
200s > stopifnot(all.equal(predict(rfw)[1:5], predict(rfw, newdata = airq)[1:5]))
201s > 
201s > ### more surrogate splits than available requested
201s > ### spotted by Henric Nilsson <henric.nilsson@sorch.se>
201s > airq <- data.frame(airq,
201s +                     x1 = factor(ifelse(runif(nrow(airq)) < 0.5, 0, 1)),
201s +                     x2 = factor(ifelse(runif(nrow(airq)) < 0.5, 0, 1)),
201s +                     x3 = factor(ifelse(runif(nrow(airq)) < 0.5, 0, 1)))
201s > 
201s > foo <- function(nm) 
201s +     ctree(Ozone ~ ., data = airq,
201s +           controls = ctree_control(maxsurrogate = nm))
201s > foo(4)
201s 
201s 	 Conditional inference tree with 6 terminal nodes
201s 
201s Response:  Ozone 
201s Inputs:  Solar.R, Wind, Temp, Month, Day, x1, x2, x3 
201s Number of observations:  116 
201s 
201s 1) Temp <= 82; criterion = 1, statistic = 56.086
201s   2) Wind <= 6.9; criterion = 0.997, statistic = 12.969
201s     3)*  weights = 10 
201s   2) Wind > 6.9
201s     4) Temp <= 77; criterion = 0.995, statistic = 11.599
201s       5)*  weights = 48 
201s     4) Temp > 77
201s       6)*  weights = 21 
201s 1) Temp > 82
201s   7) Wind <= 10.3; criterion = 0.995, statistic = 11.712
201s     8) x1 == {1}; criterion = 0.961, statistic = 7.877
201s       9)*  weights = 15 
201s     8) x1 == {0}
201s       10)*  weights = 15 
201s   7) Wind > 10.3
201s     11)*  weights = 7 
201s > try(foo(5))
201s > try(foo(6))
201s Error in model@fit(data, ...) : 
201s   cannot set up 5 surrogate splits with only 4 ordered input variable(s)
201s Error in model@fit(data, ...) : 
201s   cannot set up 6 surrogate splits with only 4 ordered input variable(s)
201s > 
201s > ### variance = 0 due to constant variables
201s > ### spotted by Sebastian Wietzke <Sebastian.Wietzke@axa.de>
201s > v <- rep(0,20)
201s > w <- rep(0,20)
201s > x <- 1:20
201s > y <- rep(1,20)
201s > z <- c(4,5,8,2,6,1,3,6,8,2,5,8,9,3,5,8,9,4,6,8)
201s > tmp <- ctree(z ~ v+w+x+y,controls = ctree_control(mincriterion = 0.80,
201s +              minsplit = 2, minbucket = 1, testtype = "Univariate", teststat = "quad"))
201s > stopifnot(all(tmp@tree$criterion$criterion[c(1,2,4)] == 0))
201s > 
201s > ### optimal split in last observation lead to selection of suboptimal split
201s > data("GlaucomaM", package = "TH.data")
201s > tmp <- subset(GlaucomaM, vari <= 0.059)
201s > weights <- rep(1.0, nrow(tmp))
201s > stopifnot(all.equal(Split(tmp$vasg, tmp$Class, weights, 
201s +                     ctree_control()@splitctrl)[[1]], 0.066))
201s > 
201s > ### model.matrix.survReg was missing from modeltools
201s > data("GBSG2", package = "TH.data")
201s > nloglik <- function(x) -logLik(x)
201s > GBSG2$time <- GBSG2$time/365
201s > mobGBSG2 <- mob(Surv(time, cens) ~ horTh + pnodes | progrec + menostat +
201s +   estrec + menostat + age + tsize + tgrade, data = GBSG2, model = survReg,
201s +   control = mob_control(objfun = nloglik, minsplit = 40))
202s > plot(mobGBSG2, terminal = node_scatterplot, tp_args = list(yscale = c(-0.1, 11)))
202s > 
202s > ### factors were evaluated for surrogate splits
202s > data("Ozone", package = "mlbench")
202s > Ozone$V2 <- ordered(Ozone$V2)
202s > Ozone <- subset(Ozone, !is.na(V4))
202s > rf <- cforest(V4 ~ ., data = Ozone, control = cforest_unbiased(maxsurrogate = 7))
204s > 
204s > ### scores for response
204s > ### spotted and fixed by Silke Janitza <janitza@ibe.med.uni-muenchen.de>
204s > tmp <- data.frame(y = gl(3, 10, ordered = TRUE), x = gl(3, 10, ordered = TRUE))
204s > ct <- ctree(y ~ x, data = tmp, scores = list(y = c(0, 10, 11), x = c(1, 2, 5)))
204s > stopifnot(isTRUE(all.equal(ct@responses@scores, list(y = c(0, 10, 11)))))
204s > 
204s > ### deal with empty levels for teststat = "quad" by
204s > ### removing elements of the teststatistic with zero variance  
204s > ### reported by Wei-Yin Loh <loh@stat.wisc.edu>
204s > tdata <-
204s + structure(list(ytrain = structure(c(3L, 7L, 3L, 2L, 1L, 6L, 2L, 
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205s + 1L, 4L, 3L, 2L, 1L, 1L, 4L, 2L, 4L, 1L, 1L, 4L, 1L, 4L, 1L, 4L, 
205s Loading required package: grid
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205s + 2L, 6L, 4L, 3L, 4L, 6L, 4L, 5L, 3L, 3L, 3L, 3L, 2L, 5L, 6L, 5L, 
205s + 3L, 2L, 3L, 2L, 3L, 4L, 3L, 3L, 3L, 3L, 2L, 4L, 6L, 3L, 3L, 4L, 
205s + 2L, 4L, 3L, 3L, 6L, 7L, 2L, 3L, 3L, 3L, 4L, 3L, 3L, 3L, 2L, 3L, 
205s + 7L, 2L, 3L, 4L, 5L, 2L, 2L, 6L, 3L, 3L, 2L, 3L, 4L, 3L, 2L, 3L, 
205s + 3L, 3L, 2L, 4L, 2L, 4L, 4L, 3L, 4L, 4L, 3L, 3L, 3L, 3L, 3L, 4L, 
205s + 3L, 3L, 3L, 2L, 4L, 2L, 3L, 7L, 2L, 5L, 3L, 3L, 3L, 3L, 3L, 2L, 
205s + 3L, 2L, 3L, 4L, 3L, 3L, 2L, 3L, 4L, 6L, 2L, 4L, 2L, 3L, 2L, 7L, 
205s + 4L, 4L, 2L, 3L, 3L, 2L, 4L, 2L, 5L, 4L, 4L, 4L, 5L, 4L, 4L, 4L, 
205s + 4L, 2L, 2L, 4L, 3L, 4L, 3L, 4L, 2L, 3L, 2L, 2L, 6L, 4L, 5L, 3L, 
205s + 3L, 6L, 3L, 2L, 4L, 4L, 7L, 2L, 3L, 4L, 4L, 4L, 5L), red = c(1L, 
205s + 1L, 1L, 1L, 1L, 1L, 0L, 0L, 0L, 1L, 1L, 0L, 1L, 1L, 0L, 1L, 1L, 
205s + 1L, 1L, 1L, 0L, 0L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
205s + 1L, 1L, 1L, 0L, 1L, 1L, 1L, 1L, 0L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
205s + 0L, 1L, 1L, 1L, 1L, 1L, 0L, 1L, 1L, 0L, 1L, 1L, 1L, 1L, 0L, 1L, 
205s + 1L, 0L, 1L, 1L, 1L, 1L, 0L, 1L, 1L, 1L, 1L, 1L, 1L, 0L, 0L, 1L, 
205s + 1L, 0L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
205s + 1L, 1L, 0L, 0L, 1L, 0L, 1L, 1L, 1L, 1L, 0L, 0L, 1L, 1L, 1L, 0L, 
205s + 0L, 0L, 1L, 1L, 1L, 1L, 0L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 0L, 1L, 
205s + 1L, 1L, 0L, 1L, 0L, 1L, 0L, 0L, 1L, 1L, 1L, 0L, 1L, 0L, 0L, 1L, 
205s + 1L, 0L, 1L, 1L, 1L, 0L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
205s + 0L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L), green = c(1L, 
205s + 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 1L, 
205s + 1L, 1L, 0L, 0L, 1L, 1L, 0L, 1L, 1L, 0L, 1L, 1L, 0L, 1L, 1L, 1L, 
205s + 0L, 0L, 0L, 1L, 1L, 0L, 0L, 0L, 1L, 0L, 0L, 1L, 1L, 0L, 0L, 0L, 
205s + 0L, 1L, 1L, 0L, 1L, 1L, 0L, 0L, 0L, 1L, 1L, 0L, 0L, 0L, 0L, 1L, 
205s + 1L, 0L, 1L, 1L, 1L, 0L, 0L, 1L, 1L, 0L, 0L, 1L, 1L, 1L, 0L, 1L, 
205s + 1L, 1L, 0L, 1L, 0L, 1L, 0L, 0L, 1L, 1L, 0L, 0L, 0L, 1L, 1L, 0L, 
205s + 1L, 0L, 0L, 1L, 1L, 0L, 0L, 1L, 1L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s + 1L, 1L, 0L, 1L, 0L, 1L, 1L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 1L, 
205s + 1L, 1L, 1L, 1L, 1L, 0L, 1L, 0L, 1L, 0L, 0L, 1L, 1L, 0L, 1L, 1L, 
205s + 1L, 0L, 0L, 1L, 0L, 1L, 0L, 1L, 0L, 0L, 0L, 0L, 1L, 1L, 0L, 0L, 
205s + 0L, 1L, 0L, 0L, 1L, 0L, 1L, 0L, 0L, 0L, 1L, 1L, 1L), blue = c(0L, 
205s + 0L, 0L, 1L, 1L, 0L, 1L, 1L, 1L, 1L, 0L, 1L, 0L, 0L, 1L, 0L, 1L, 
205s + 0L, 1L, 0L, 1L, 1L, 1L, 0L, 1L, 0L, 1L, 0L, 0L, 0L, 0L, 1L, 1L, 
205s + 1L, 0L, 1L, 0L, 0L, 1L, 1L, 1L, 0L, 1L, 0L, 1L, 1L, 1L, 1L, 0L, 
205s + 1L, 1L, 0L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 0L, 0L, 0L, 1L, 0L, 
205s + 1L, 1L, 0L, 0L, 0L, 0L, 1L, 1L, 0L, 1L, 0L, 0L, 0L, 0L, 1L, 0L, 
205s + 0L, 0L, 0L, 0L, 0L, 0L, 1L, 1L, 0L, 1L, 1L, 1L, 1L, 0L, 0L, 1L, 
205s + 0L, 0L, 1L, 0L, 0L, 1L, 1L, 1L, 0L, 0L, 1L, 1L, 1L, 1L, 1L, 1L, 
205s + 0L, 0L, 1L, 0L, 1L, 0L, 0L, 1L, 0L, 1L, 0L, 1L, 0L, 1L, 0L, 1L, 
205s + 0L, 0L, 0L, 0L, 1L, 0L, 1L, 1L, 1L, 1L, 1L, 0L, 0L, 1L, 1L, 0L, 
205s + 0L, 1L, 0L, 0L, 1L, 1L, 1L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 1L, 
205s + 1L, 1L, 1L, 0L, 0L, 0L, 1L, 0L, 1L, 1L, 0L, 0L, 0L), gold = c(1L, 
205s + 1L, 0L, 1L, 1L, 1L, 0L, 0L, 1L, 0L, 0L, 1L, 0L, 0L, 1L, 1L, 1L, 
205s + 0L, 1L, 0L, 0L, 1L, 1L, 1L, 1L, 1L, 0L, 0L, 1L, 0L, 1L, 1L, 1L, 
205s + 0L, 1L, 1L, 0L, 1L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 1L, 0L, 1L, 1L, 
205s + 0L, 0L, 1L, 0L, 1L, 1L, 0L, 0L, 0L, 1L, 0L, 1L, 1L, 1L, 0L, 1L, 
205s + 1L, 0L, 1L, 1L, 1L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s + 0L, 1L, 0L, 0L, 1L, 0L, 1L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 1L, 
205s + 0L, 0L, 0L, 1L, 0L, 0L, 1L, 1L, 0L, 1L, 1L, 0L, 0L, 0L, 0L, 0L, 
205s + 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 1L, 0L, 1L, 0L, 0L, 0L, 1L, 
205s + 1L, 1L, 0L, 1L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 1L, 1L, 1L, 1L, 0L, 
205s + 1L, 1L, 0L, 0L, 0L, 1L, 0L, 1L, 0L, 0L, 0L, 0L, 1L, 0L, 1L, 0L, 
205s + 1L, 1L, 0L, 1L, 1L, 1L, 1L, 1L, 0L, 1L, 1L, 0L, 1L), white = c(1L, 
205s + 0L, 1L, 1L, 0L, 0L, 1L, 1L, 1L, 1L, 1L, 0L, 1L, 0L, 0L, 0L, 1L, 
205s + 0L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 0L, 1L, 1L, 0L, 1L, 0L, 1L, 1L, 
205s + 1L, 0L, 0L, 1L, 0L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 0L, 1L, 
205s + 1L, 1L, 0L, 1L, 1L, 1L, 1L, 1L, 1L, 0L, 1L, 0L, 0L, 1L, 1L, 0L, 
205s + 1L, 1L, 0L, 0L, 1L, 0L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
205s + 1L, 0L, 1L, 1L, 0L, 1L, 1L, 1L, 1L, 1L, 1L, 0L, 1L, 1L, 0L, 1L, 
205s + 1L, 1L, 1L, 0L, 1L, 1L, 0L, 1L, 0L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
205s + 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
205s + 0L, 0L, 1L, 0L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 0L, 1L, 1L, 1L, 1L, 
205s + 1L, 0L, 1L, 1L, 1L, 0L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 
205s + 1L, 1L, 1L, 0L, 0L, 1L, 1L, 0L, 1L, 1L, 0L, 0L, 1L), black = c(1L, 
205s + 1L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 1L, 1L, 1L, 
205s + 0L, 1L, 1L, 1L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 
205s + 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 1L, 
205s + 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 1L, 0L, 0L, 0L, 
205s + 0L, 0L, 0L, 1L, 1L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 
205s + 0L, 1L, 0L, 1L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 
205s + 0L, 1L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s + 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 1L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s + 1L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 1L, 0L, 1L, 1L, 0L, 1L, 
205s + 0L, 0L, 0L, 1L, 0L, 1L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 1L, 1L, 0L, 
205s + 0L, 0L, 0L, 0L, 1L, 1L, 1L, 0L, 0L, 0L, 0L, 1L, 1L), orange = c(0L, 
205s + 0L, 0L, 1L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 
205s + 0L, 0L, 1L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 1L, 0L, 
205s + 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s + 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s + 1L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 
205s + 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s + 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 
205s + 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 1L, 
205s + 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 
205s + 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 
205s + 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 1L, 1L, 0L), mainhue = structure(c(5L, 
205s + 7L, 5L, 2L, 4L, 7L, 8L, 2L, 2L, 2L, 7L, 2L, 7L, 5L, 2L, 4L, 2L, 
205s + 5L, 7L, 6L, 2L, 5L, 2L, 4L, 7L, 7L, 7L, 7L, 4L, 7L, 4L, 2L, 4L, 
205s + 7L, 7L, 4L, 5L, 7L, 2L, 2L, 2L, 8L, 8L, 7L, 2L, 5L, 2L, 4L, 1L, 
205s + 2L, 5L, 5L, 8L, 2L, 2L, 8L, 8L, 8L, 5L, 7L, 4L, 1L, 8L, 2L, 4L, 
205s + 2L, 2L, 4L, 4L, 5L, 1L, 2L, 2L, 7L, 2L, 7L, 7L, 7L, 8L, 8L, 8L, 
205s + 8L, 5L, 8L, 1L, 7L, 7L, 7L, 7L, 7L, 2L, 7L, 7L, 7L, 7L, 7L, 7L, 
205s + 7L, 7L, 2L, 5L, 5L, 2L, 7L, 2L, 7L, 4L, 2L, 3L, 7L, 8L, 2L, 2L, 
205s + 6L, 5L, 2L, 7L, 7L, 7L, 5L, 7L, 1L, 7L, 7L, 2L, 8L, 7L, 3L, 7L, 
205s + 7L, 5L, 5L, 5L, 5L, 8L, 5L, 2L, 6L, 8L, 7L, 4L, 5L, 2L, 5L, 7L, 
205s + 7L, 2L, 7L, 7L, 7L, 5L, 7L, 5L, 7L, 7L, 7L, 7L, 2L, 5L, 4L, 7L, 
205s + 8L, 8L, 8L, 7L, 7L, 4L, 7L, 7L, 7L, 7L, 5L, 5L, 5L), .Label = c("black", 
205s + "blue", "brown", "gold", "green", "orange", "red", "white"), class = "factor"), 
205s +     circles = c(0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 1L, 0L, 0L, 1L, 0L, 1L, 4L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 
205s +     1L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 1L, 
205s +     0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 2L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 1L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 1L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L), crosses = c(0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 1L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     1L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 
205s +     1L, 0L, 0L, 0L, 0L, 0L, 1L, 1L, 2L, 1L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 1L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 2L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 1L, 0L, 0L, 0L, 
205s +     0L, 0L, 1L, 0L, 0L, 0L, 1L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L), saltires = c(0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     1L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 1L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 1L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 1L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L), quarters = c(0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 
205s +     0L, 0L, 1L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 1L, 0L, 1L, 0L, 
205s +     0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 1L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 
205s +     0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 4L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 1L, 1L, 0L, 
205s +     0L, 0L, 1L, 0L, 0L, 0L, 1L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 1L, 
205s +     0L, 0L, 0L, 0L), sunstars = c(1L, 1L, 1L, 0L, 0L, 1L, 0L, 
205s +     0L, 1L, 6L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 22L, 
205s +     0L, 0L, 1L, 1L, 14L, 3L, 1L, 0L, 1L, 4L, 1L, 1L, 5L, 0L, 
205s +     4L, 1L, 15L, 0L, 1L, 0L, 0L, 0L, 1L, 10L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 7L, 
205s +     0L, 0L, 0L, 1L, 0L, 0L, 5L, 0L, 0L, 0L, 0L, 0L, 3L, 0L, 1L, 
205s +     0L, 0L, 0L, 1L, 1L, 0L, 0L, 1L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 
205s +     1L, 1L, 0L, 0L, 1L, 1L, 0L, 4L, 1L, 0L, 1L, 1L, 1L, 2L, 0L, 
205s +     6L, 4L, 0L, 0L, 0L, 1L, 1L, 0L, 0L, 1L, 2L, 5L, 1L, 0L, 4L, 
205s +     0L, 1L, 0L, 2L, 0L, 2L, 0L, 1L, 0L, 5L, 5L, 1L, 0L, 0L, 1L, 
205s +     0L, 2L, 0L, 0L, 0L, 1L, 0L, 0L, 2L, 1L, 0L, 0L, 1L, 0L, 0L, 
205s +     1L, 1L, 0L, 0L, 0L, 0L, 1L, 0L, 50L, 1L, 0L, 0L, 7L, 1L, 
205s +     5L, 1L, 0L, 0L, 1L), crescent = c(0L, 0L, 1L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     1L, 1L, 0L, 0L, 1L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 
205s +     1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L), triangle = c(0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 1L, 0L, 1L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 
205s +     0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 
205s +     0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 1L, 0L, 1L, 0L, 
205s +     0L, 0L, 1L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 1L, 0L, 1L, 1L, 
205s +     0L, 1L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     1L), icon = c(1L, 0L, 0L, 1L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 1L, 0L, 1L, 0L, 1L, 0L, 0L, 0L, 1L, 1L, 1L, 0L, 
205s +     1L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 
205s +     1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 1L, 0L, 
205s +     0L, 0L, 0L, 0L, 1L, 0L, 1L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 1L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 
205s +     1L, 1L, 0L, 0L, 1L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 1L, 1L, 0L, 
205s +     0L, 0L, 1L, 1L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 1L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 
205s +     1L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 1L, 0L, 0L, 1L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 
205s +     0L, 1L, 0L, 1L, 0L, 1L, 1L, 0L, 0L, 0L, 1L, 0L, 1L), animate = c(0L, 
205s +     1L, 0L, 1L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     1L, 0L, 1L, 1L, 0L, 0L, 1L, 1L, 1L, 0L, 1L, 0L, 0L, 1L, 1L, 
205s +     1L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 1L, 
205s +     0L, 0L, 1L, 0L, 0L, 0L, 0L, 1L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 1L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 1L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 1L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     1L, 1L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 1L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 1L, 0L, 0L, 1L, 0L, 0L, 1L, 
205s +     0L, 1L, 0L, 0L, 0L, 1L, 1L, 1L), text = c(0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 
205s +     0L, 0L, 1L, 1L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 
205s +     0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 1L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 
205s +     0L, 0L, 0L, 0L, 1L, 1L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L, 0L, 0L, 0L, 1L, 0L, 0L, 0L, 0L, 0L, 0L, 
205s +     0L, 0L, 0L, 0L, 0L), topleft = structure(c(1L, 6L, 4L, 2L, 
205s +     2L, 6L, 7L, 2L, 2L, 7L, 6L, 2L, 7L, 4L, 2L, 1L, 6L, 4L, 7L, 
205s +     5L, 2L, 4L, 7L, 7L, 7L, 6L, 2L, 7L, 4L, 6L, 6L, 7L, 2L, 2L, 
205s +     6L, 3L, 4L, 6L, 7L, 2L, 2L, 7L, 7L, 6L, 7L, 4L, 2L, 3L, 6L, 
205s +     2L, 4L, 4L, 7L, 7L, 7L, 7L, 2L, 2L, 4L, 6L, 1L, 1L, 7L, 2L, 
205s +     6L, 6L, 2L, 6L, 6L, 1L, 1L, 2L, 7L, 6L, 2L, 6L, 4L, 6L, 4L, 
205s +     2L, 4L, 6L, 3L, 7L, 1L, 6L, 1L, 6L, 6L, 6L, 4L, 2L, 2L, 6L, 
205s +     7L, 1L, 2L, 6L, 7L, 2L, 4L, 4L, 2L, 6L, 7L, 6L, 4L, 2L, 2L, 
205s +     6L, 7L, 7L, 2L, 5L, 4L, 2L, 6L, 6L, 6L, 7L, 7L, 6L, 6L, 6L, 
205s +     2L, 7L, 6L, 7L, 2L, 6L, 4L, 4L, 4L, 4L, 6L, 2L, 2L, 5L, 7L, 
205s +     6L, 3L, 4L, 2L, 2L, 6L, 4L, 2L, 6L, 6L, 2L, 4L, 6L, 6L, 7L, 
205s +     7L, 6L, 6L, 7L, 6L, 1L, 7L, 7L, 7L, 2L, 6L, 1L, 3L, 3L, 6L, 
205s +     2L, 2L, 4L, 4L, 4L), .Label = c("black", "blue", "gold", 
205s +     "green", "orange", "red", "white"), class = "factor"), botright = structure(c(5L, 
205s +     7L, 8L, 7L, 7L, 1L, 2L, 2L, 2L, 2L, 7L, 2L, 7L, 5L, 2L, 7L, 
205s +     7L, 5L, 7L, 7L, 2L, 5L, 2L, 4L, 7L, 5L, 7L, 8L, 4L, 7L, 5L, 
205s +     2L, 4L, 7L, 7L, 7L, 5L, 7L, 2L, 2L, 2L, 8L, 7L, 7L, 5L, 5L, 
205s +     2L, 7L, 1L, 2L, 7L, 7L, 8L, 2L, 2L, 8L, 7L, 7L, 2L, 5L, 4L, 
205s +     4L, 7L, 2L, 7L, 7L, 2L, 5L, 5L, 5L, 7L, 2L, 2L, 5L, 2L, 8L, 
205s +     7L, 1L, 6L, 2L, 7L, 5L, 4L, 8L, 5L, 7L, 5L, 2L, 7L, 7L, 2L, 
205s +     7L, 7L, 2L, 5L, 5L, 8L, 7L, 7L, 2L, 5L, 7L, 2L, 7L, 2L, 7L, 
205s +     4L, 2L, 2L, 2L, 8L, 2L, 2L, 5L, 5L, 2L, 1L, 7L, 5L, 5L, 8L, 
205s +     1L, 2L, 7L, 7L, 7L, 7L, 3L, 7L, 5L, 5L, 5L, 7L, 2L, 8L, 5L, 
205s +     2L, 2L, 8L, 1L, 4L, 7L, 2L, 5L, 1L, 5L, 2L, 7L, 1L, 7L, 2L, 
205s +     7L, 5L, 7L, 8L, 7L, 7L, 2L, 1L, 7L, 7L, 8L, 8L, 7L, 7L, 5L, 
205s +     8L, 7L, 7L, 7L, 7L, 5L, 3L, 5L), .Label = c("black", "blue", 
205s +     "brown", "gold", "green", "orange", "red", "white"), class = "factor")), .Names = c("ytrain", 
205s + "landmass", "zone", "area", "population", "language", "bars", 
205s + "stripes", "colours", "red", "green", "blue", "gold", "white", 
205s + "black", "orange", "mainhue", "circles", "crosses", "saltires", 
205s + "quarters", "sunstars", "crescent", "triangle", "icon", "animate", 
205s + "text", "topleft", "botright"), row.names = c(NA, -174L), class = "data.frame")
205s > tdata$language <-  factor(tdata$language)
205s > tdata$ytrain <- factor(tdata$ytrain)
205s > 
205s > library("coin")
205s > 
205s > m <- ctree(ytrain ~ language, data = subset(tdata, language != "8"), 
205s +     control = ctree_control(testtype = "Univariate", maxdepth = 1L))
205s > it <- independence_test(ytrain ~ language, data = subset(tdata, language != "8"), 
205s +                         teststat = "quad")
205s > stopifnot(isTRUE(all.equal(m@tree$criterion$statistic, 
205s +                            statistic(it), check.attributes = FALSE)))
205s > 
205s > ### easier example
205s > levels(tdata$language) <- c(1, 1, 1, 1, 1, 1, 2, 8, 1, 1)
205s > levels(tdata$ytrain) <- c(1, 1, 2, 2, 3, 3, 4, 4, 5, 6)
205s > m <- ctree(ytrain ~ language, data = subset(tdata, language != "8"),
205s +     control = ctree_control(testtype = "Univariate", maxdepth = 1L))
205s > it <- independence_test(ytrain ~ language, data = subset(tdata, language != "8"), 
205s +                         teststat = "quad")
205s > stopifnot(isTRUE(all.equal(m@tree$criterion$statistic, 
205s +                            statistic(it), check.attributes = FALSE)))
205s > 
205s > ## the whole exercise manually
205s > Y <- model.matrix(~ language - 1, data = subset(tdata, language != "8"))
205s > X <- model.matrix(~ ytrain -1, data = subset(tdata, language != "8"))
205s > w <- rep(1, nrow(X))
205s > 
205s > ### coin:::LinearStatistic and coin:::ExpectCovarLinearStatistic
205s > ### have been removed from coin as of 2.0-0
205s > ### use libcoin to compare with
205s > if (FALSE) { ### (require("libcoin")) {
205s +     lstec <- LinStatExpCov(X = X, Y = Y, weights = as.integer(w))
205s + 
205s +     tmp <- new("LinStatExpectCovar", ncol(Y), ncol(X))
205s +     tmp@linearstatistic <-  lstec$LinearStatistic
205s +     tmp@expectation <- lstec$Expectation
205s +     tmp@covariance <- matrix(0, nrow = length(lstec$LinearStatistic), 
205s +                              ncol = length(lstec$LinearStatistic))
205s +     tmp@covariance[lower.tri(tmp@covariance, diag = TRUE)] <- lstec$Covariance
205s +     tmp@covariance <- tmp@covariance + t(tmp@covariance)
205s +     diag(tmp@covariance) <- diag(tmp@covariance) / 2
205s + 
205s +    a <- .Call(R_linexpcovReduce, tmp)
205s + 
205s +     u <- matrix(tmp@linearstatistic - tmp@expectation, nc = 1)
205s +     d <- tmp@dimension
205s +     u <- matrix(tmp@linearstatistic - tmp@expectation, nc = 1)[1:d,,drop = FALSE]
205s +     S <- coin:::MPinv(matrix(as.vector(tmp@covariance[1:d^2]), ncol = d))
205s +     
205s +     stat <- t(u) %*% S$MPinv %*% u
205s +     stopifnot(isTRUE(all.equal(stat[1,1], statistic(it), 
205s +                                check.attributes = FALSE)))
205s + 
205s +     x <- matrix(as.vector(tmp@covariance[1:d^2]), ncol = d)
205s +     s <- svd(x)
205s + 
205s +     m <- new("svd_mem", 18L)
205s +     m@p <- as.integer(d)
205s + 
205s +     s2 <- .Call(R_svd, x, m)
205s + 
205s +     stopifnot(max(abs(s$d - m@s[1:d])) < sqrt(.Machine$double.eps))
205s +     stopifnot(max(abs(s$v - t(matrix(m@v[1:d^2], nrow = d)))) < sqrt(.Machine$double.eps))
205s +     stopifnot(max(abs(s$u - matrix(m@u[1:d^2], nrow = d))) < sqrt(.Machine$double.eps))
205s + 
205s +     s2 <- .Call(R_svd, tmp@covariance, m)
205s + 
205s +     stopifnot(max(abs(s$d - m@s[1:d])) < sqrt(.Machine$double.eps))
205s +     stopifnot(max(abs(s$v - t(matrix(m@v[1:d^2], nrow = d)))) < sqrt(.Machine$double.eps))
205s +     stopifnot(max(abs(s$u - matrix(m@u[1:d^2], nrow = d))) < sqrt(.Machine$double.eps))
205s + 
205s +     a <- .Call(R_MPinv, tmp@covariance, sqrt(.Machine$double.eps), m)
205s + 
205s +     stat <- t(u) %*% matrix(a@MPinv[1:d^2], ncol = d) %*% u  
205s +     stopifnot(isTRUE(all.equal(stat[1,1], statistic(it), 
205s +                                check.attributes = FALSE)))
205s + }
205s > 
205s BEGIN TEST mob.R
205s 
205s R version 4.4.3 (2025-02-28) -- "Trophy Case"
205s Copyright (C) 2025 The R Foundation for Statistical Computing
205s Platform: s390x-ibm-linux-gnu
205s 
205s R is free software and comes with ABSOLUTELY NO WARRANTY.
205s You are welcome to redistribute it under certain conditions.
205s Type 'license()' or 'licence()' for distribution details.
205s 
205s R is a collaborative project with many contributors.
205s Type 'contributors()' for more information and
205s 'citation()' on how to cite R or R packages in publications.
205s 
205s Type 'demo()' for some demos, 'help()' for on-line help, or
205s 'help.start()' for an HTML browser interface to help.
205s Type 'q()' to quit R.
205s 
205s > library("party")
205s Loading required package: mvtnorm
205s Loading required package: modeltools
205s Loading required package: stats4
205s Loading required package: strucchange
205s Loading required package: zoo
205s 
205s Attaching package: ‘zoo’
205s 
205s The following objects are masked from ‘package:base’:
205s 
205s     as.Date, as.Date.numeric
205s 
205s Loading required package: sandwich
205s > 
205s > data("BostonHousing", package = "mlbench")
205s > BostonHousing$lstat <- log(BostonHousing$lstat)
205s > BostonHousing$rm <- BostonHousing$rm^2
205s > BostonHousing$chas <- factor(BostonHousing$chas, levels = 0:1, labels = c("no", "yes"))
205s > BostonHousing$rad <- factor(BostonHousing$rad, ordered = TRUE)
205s > fmBH <- mob(medv ~ lstat + rm | zn + indus + chas + nox + age + dis + rad + tax + crim + b + ptratio,
205s +   control = mob_control(minsplit = 40, verbose = TRUE),
205s +   data = BostonHousing, model = linearModel)
205s 
205s -------------------------------------------
205s Fluctuation tests of splitting variables:
205s                     zn        indus         chas          nox          age
205s statistic 3.363356e+01 6.532322e+01 2.275635e+01 8.136281e+01 3.675850e+01
205s p.value   1.023987e-04 1.363602e-11 4.993053e-04 3.489797e-15 2.263798e-05
205s                    dis          rad          tax         crim            b
205s statistic 6.848533e+01 1.153641e+02 9.068440e+01 8.655065e+01 3.627629e+01
205s p.value   2.693904e-12 7.087680e-13 2.735524e-17 2.356348e-16 2.860686e-05
205s                ptratio
205s statistic 7.221524e+01
205s p.value   3.953623e-13
205s 
205s Best splitting variable: tax
205s Perform split? yes
205s -------------------------------------------
205s 
205s Node properties:
205s tax <= 432; criterion = 1, statistic = 115.364
205s 
205s -------------------------------------------
205s Fluctuation tests of splitting variables:
205s                     zn      indus      chas          nox        age
205s statistic 27.785009791 21.3329346 8.0272421 23.774323202 11.9204284
205s p.value    0.001494064  0.0285193 0.4005192  0.009518732  0.7666366
205s                    dis          rad          tax         crim         b
205s statistic 24.268011081 50.481593270 3.523250e+01 3.276813e+01 9.0363245
205s p.value    0.007601532  0.003437763 4.275527e-05 1.404487e-04 0.9871502
205s                ptratio
205s statistic 4.510680e+01
205s p.value   3.309747e-07
205s 
205s Best splitting variable: ptratio
205s Perform split? yes
205s -------------------------------------------
205s 
205s Node properties:
205s ptratio <= 15.2; criterion = 1, statistic = 50.482
205s 
205s -------------------------------------------
205s Fluctuation tests of splitting variables:
205s                     zn       indus        chas         nox         age
205s statistic 3.233350e+01 22.26864036 12.93407112 22.10510234 20.41295354
205s p.value   1.229678e-04  0.01504788  0.05259509  0.01622098  0.03499731
205s                  dis          rad          tax        crim         b
205s statistic 17.7204735 5.526565e+01 2.879128e+01 20.28503194 6.5549665
205s p.value    0.1091769 7.112214e-04 6.916307e-04  0.03706934 0.9999522
205s                ptratio
205s statistic 4.789850e+01
205s p.value   4.738855e-08
205s 
205s Best splitting variable: ptratio
205s Perform split? yes
205s -------------------------------------------
205s 
205s Node properties:
205s ptratio <= 19.6; criterion = 1, statistic = 55.266
205s 
205s -------------------------------------------
205s Fluctuation tests of splitting variables:
205s                  zn      indus      chas        nox       age        dis
205s statistic 14.971474 14.6477733 7.1172962 14.3455158 8.2176363 16.1112185
205s p.value    0.280361  0.3134649 0.5405005  0.3467974 0.9906672  0.1847818
205s                   rad          tax     crim         b    ptratio
205s statistic 43.17824350 3.447271e+01 9.340075 8.7773142 10.8469969
205s p.value    0.03281124 4.281939e-05 0.952996 0.9772696  0.8202694
205s 
205s Best splitting variable: tax
205s Perform split? yes
205s -------------------------------------------
205s 
205s Node properties:
205s tax <= 265; criterion = 1, statistic = 43.178
205s 
205s -------------------------------------------
205s Fluctuation tests of splitting variables:
205s                  zn     indus     chas       nox        age       dis
205s statistic 11.998039 7.3971233 7.227770 9.2936189 14.3023962 8.9239826
205s p.value    0.574642 0.9931875 0.522447 0.9119621  0.2886603 0.9389895
205s                  rad        tax       crim         b    ptratio
205s statistic 33.1746444 16.6666129 11.7143758 9.9050903 11.5927528
205s p.value    0.3926249  0.1206412  0.6153455 0.8539893  0.6328381
205s 
205s Best splitting variable: tax
205s Perform split? no
205s -------------------------------------------
205s 
205s -------------------------------------------
205s Fluctuation tests of splitting variables:
205s                   zn     indus         chas         nox       age        dis
205s statistic 10.9187926 9.0917078 2.754081e+01 17.39203006 4.6282349 11.9581600
205s p.value    0.7091039 0.9172303 4.987667e-05  0.08922543 0.9999992  0.5607267
205s                 rad        tax     crim        b   ptratio
205s statistic 0.2557803 10.9076165 3.711175 3.158329 9.8865054
205s p.value   1.0000000  0.7106612 1.000000 1.000000 0.8410064
205s 
205s Best splitting variable: chas
205s Perform split? yes
205s -------------------------------------------
205s 
205s Splitting factor variable, objective function: 
205s  no 
205s Inf 
205s 
205s No admissable split found in ‘chas’
205s > fmBH
205s 1) tax <= 432; criterion = 1, statistic = 115.364
205s   2) ptratio <= 15.2; criterion = 1, statistic = 50.482
205s     3)*  weights = 72 
205s Terminal node model
205s Linear model with coefficients:
205s (Intercept)        lstat           rm  
205s      9.2349      -4.9391       0.6859  
205s 
205s   2) ptratio > 15.2
205s     4) ptratio <= 19.6; criterion = 1, statistic = 55.266
205s       5) tax <= 265; criterion = 1, statistic = 43.178
205s         6)*  weights = 63 
205s Terminal node model
205s Linear model with coefficients:
205s (Intercept)        lstat           rm  
205s      3.9637      -2.7663       0.6881  
205s 
205s       5) tax > 265
205s         7)*  weights = 162 
205s Terminal node model
205s Linear model with coefficients:
205s (Intercept)        lstat           rm  
205s     -1.7984      -0.2677       0.6539  
205s 
205s     4) ptratio > 19.6
205s       8)*  weights = 56 
205s Terminal node model
205s Linear model with coefficients:
205s (Intercept)        lstat           rm  
205s     17.5865      -4.6190       0.3387  
205s 
205s 1) tax > 432
205s   9)*  weights = 153 
205s Terminal node model
205s Linear model with coefficients:
205s (Intercept)        lstat           rm  
205s     68.2971     -16.3540      -0.1478  
205s 
205s > summary(fmBH)
205s $`3`
205s 
205s Call:
205s NULL
205s 
205s Weighted Residuals:
205s    Min     1Q Median     3Q    Max 
205s -7.910  0.000  0.000  0.000  6.632 
205s 
205s Coefficients:
205s             Estimate Std. Error t value Pr(>|t|)    
205s (Intercept)  9.23488    3.95128   2.337   0.0223 *  
205s lstat       -4.93910    0.88285  -5.595 4.14e-07 ***
205s rm           0.68591    0.05136  13.354  < 2e-16 ***
205s ---
205s Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
205s 
205s Residual standard error: 3.413 on 69 degrees of freedom
205s Multiple R-squared:  0.922,	Adjusted R-squared:  0.9197 
205s F-statistic: 407.8 on 2 and 69 DF,  p-value: < 2.2e-16
205s 
205s 
205s $`6`
205s 
205s Call:
205s NULL
205s 
205s Weighted Residuals:
205s    Min     1Q Median     3Q    Max 
205s -4.614  0.000  0.000  0.000 12.473 
205s 
205s Coefficients:
205s             Estimate Std. Error t value Pr(>|t|)    
205s (Intercept)  3.96372    5.00781   0.792  0.43177    
205s lstat       -2.76629    1.00406  -2.755  0.00776 ** 
205s rm           0.68813    0.07716   8.918 1.36e-12 ***
205s ---
205s Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
205s 
205s Residual standard error: 3.2 on 60 degrees of freedom
205s Multiple R-squared:  0.8176,	Adjusted R-squared:  0.8115 
205s F-statistic: 134.5 on 2 and 60 DF,  p-value: < 2.2e-16
205s 
205s 
205s $`7`
205s 
205s Call:
205s NULL
205s 
205s Weighted Residuals:
205s    Min     1Q Median     3Q    Max 
205s -9.092  0.000  0.000  0.000 10.236 
205s 
205s Coefficients:
205s             Estimate Std. Error t value Pr(>|t|)    
205s (Intercept) -1.79839    2.84702  -0.632    0.529    
205s lstat       -0.26771    0.69581  -0.385    0.701    
205s rm           0.65389    0.03757  17.404   <2e-16 ***
205s ---
205s Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
205s 
205s Residual standard error: 2.652 on 159 degrees of freedom
205s Multiple R-squared:  0.8173,	Adjusted R-squared:  0.815 
205s F-statistic: 355.6 on 2 and 159 DF,  p-value: < 2.2e-16
205s 
205s 
205s $`8`
205s 
205s Call:
205s NULL
205s 
205s Weighted Residuals:
205s    Min     1Q Median     3Q    Max 
205s -8.466  0.000  0.000  0.000  4.947 
205s 
205s Coefficients:
205s             Estimate Std. Error t value Pr(>|t|)    
205s (Intercept) 17.58649    4.21666   4.171 0.000113 ***
205s lstat       -4.61897    0.84025  -5.497 1.13e-06 ***
205s rm           0.33867    0.07574   4.472 4.13e-05 ***
205s ---
205s Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
205s 
205s Residual standard error: 2.197 on 53 degrees of freedom
205s Multiple R-squared:  0.6446,	Adjusted R-squared:  0.6312 
205s F-statistic: 48.07 on 2 and 53 DF,  p-value: 1.238e-12
205s 
205s 
205s $`9`
205s 
205s Call:
205s NULL
205s 
205s Weighted Residuals:
205s    Min     1Q Median     3Q    Max 
205s -10.56   0.00   0.00   0.00  24.28 
205s 
205s Coefficients:
205s              Estimate Std. Error t value Pr(>|t|)    
205s (Intercept)  68.29709    3.83284  17.819  < 2e-16 ***
205s lstat       -16.35401    0.96577 -16.934  < 2e-16 ***
205s rm           -0.14779    0.05047  -2.928  0.00394 ** 
205s ---
205s Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
205s 
205s Residual standard error: 4.689 on 150 degrees of freedom
205s Multiple R-squared:  0.6649,	Adjusted R-squared:  0.6604 
205s F-statistic: 148.8 on 2 and 150 DF,  p-value: < 2.2e-16
205s 
205s 
205s > 
205s > ### check for one-node tree
205s > fmBH <- try(mob(medv ~ lstat + rm | zn, control = mob_control(minsplit = 4000, verbose = TRUE),
205s +   data = BostonHousing, model = linearModel))
205s > stopifnot(class(fmBH) != "try-error")
205s > 
205s > 
205s > data("PimaIndiansDiabetes", package = "mlbench")
205s > fmPID <- mob(diabetes ~ glucose | pregnant + pressure + triceps + insulin + mass + pedigree + age,
205s +   control = mob_control(verbose = TRUE),
205s +   data = PimaIndiansDiabetes, model = glinearModel, family = binomial())
205s 
205s -------------------------------------------
205s Fluctuation tests of splitting variables:
205s               pregnant  pressure     triceps   insulin         mass    pedigree
205s statistic 2.988542e+01 7.5024235 15.94095417 6.5969297 4.880982e+01 18.33476114
205s p.value   9.778517e-05 0.9104325  0.06660773 0.9701412 8.316815e-09  0.02275017
205s                    age
205s statistic 4.351412e+01
205s p.value   1.182811e-07
205s 
205s Best splitting variable: mass
205s Perform split? yes
205s -------------------------------------------
206s 
206s Node properties:
206s mass <= 26.3; criterion = 1, statistic = 48.81
206s 
206s -------------------------------------------
206s Fluctuation tests of splitting variables:
206s             pregnant pressure  triceps   insulin       mass  pedigree       age
206s statistic 10.3924070 4.353740 5.911229 3.7855726 10.4748907 3.6263026 6.0978662
206s p.value    0.4903221 0.999824 0.986895 0.9999888  0.4785454 0.9999958 0.9817742
206s 
206s Best splitting variable: mass
206s Perform split? no
206s -------------------------------------------
206s 
206s -------------------------------------------
206s Fluctuation tests of splitting variables:
206s               pregnant  pressure  triceps   insulin      mass    pedigree
206s statistic 2.673912e+01 6.1757583 7.346804 7.8963977 9.1545915 17.96438828
206s p.value   4.434356e-04 0.9845137 0.922646 0.8700398 0.7033477  0.02677105
206s                    age
206s statistic 3.498466e+01
206s p.value   8.098640e-06
206s 
206s Best splitting variable: age
206s Perform split? yes
206s -------------------------------------------
206s 
206s Node properties:
206s age <= 30; criterion = 1, statistic = 34.985
206s 
206s -------------------------------------------
206s Fluctuation tests of splitting variables:
206s            pregnant  pressure  triceps   insulin      mass pedigree       age
206s statistic 4.3749991 9.4006532 7.661457 9.0583568 5.4287861 5.640420 6.3088818
206s p.value   0.9998989 0.6656073 0.893893 0.7168659 0.9967316 0.994611 0.9804133
206s 
206s Best splitting variable: pressure
206s Perform split? no
206s -------------------------------------------
206s 
206s -------------------------------------------
206s Fluctuation tests of splitting variables:
206s            pregnant pressure   triceps   insulin      mass   pedigree
206s statistic 7.7282903 1.935271 3.6078314 4.9703223 10.136944 11.9004129
206s p.value   0.8882324 1.000000 0.9999987 0.9991162  0.555382  0.3205095
206s                  age
206s statistic 10.1330698
206s p.value    0.5559631
206s 
206s Best splitting variable: pedigree
206s Perform split? no
206s -------------------------------------------
206s > fmPID
206s 1) mass <= 26.3; criterion = 1, statistic = 48.81
206s   2)*  weights = 167 
206s Terminal node model
206s Binomial GLM with coefficients:
206s (Intercept)      glucose  
206s    -9.95151      0.05871  
206s 
206s 1) mass > 26.3
206s   3) age <= 30; criterion = 1, statistic = 34.985
206s     4)*  weights = 304 
206s Terminal node model
206s Binomial GLM with coefficients:
206s (Intercept)      glucose  
206s    -6.70559      0.04684  
206s 
206s   3) age > 30
206s     5)*  weights = 297 
206s Terminal node model
206s Binomial GLM with coefficients:
206s (Intercept)      glucose  
206s    -2.77095      0.02354  
206s 
206s > summary(fmPID)
206s $`2`
206s 
206s Call:
206s NULL
206s 
206s Coefficients:
206s             Estimate Std. Error z value Pr(>|z|)    
206s (Intercept) -9.95151    1.74013  -5.719 1.07e-08 ***
206s glucose      0.05871    0.01211   4.846 1.26e-06 ***
206s ---
206s Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
206s 
206s (Dispersion parameter for binomial family taken to be 1)
206s 
206s     Null deviance: 96.202  on 166  degrees of freedom
206s Residual deviance: 60.502  on 165  degrees of freedom
206s AIC: 64.502
206s 
206s Number of Fisher Scoring iterations: 6
206s 
206s 
206s $`4`
206s 
206s Call:
206s NULL
206s 
206s Coefficients:
206s              Estimate Std. Error z value Pr(>|z|)    
206s (Intercept) -6.705586   0.800193  -8.380  < 2e-16 ***
206s glucose      0.046837   0.006208   7.544 4.54e-14 ***
206s ---
206s Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
206s 
206s (Dispersion parameter for binomial family taken to be 1)
206s 
206s     Null deviance: 364.01  on 303  degrees of freedom
206s Residual deviance: 280.98  on 302  degrees of freedom
206s AIC: 284.98
206s 
206s Number of Fisher Scoring iterations: 5
206s 
206s 
206s $`5`
206s 
206s Call:
206s NULL
206s 
206s Coefficients:
206s              Estimate Std. Error z value Pr(>|z|)    
206s (Intercept) -2.770954   0.548241  -5.054 4.32e-07 ***
206s glucose      0.023536   0.004202   5.601 2.13e-08 ***
206s ---
206s Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1
206s 
206s (Dispersion parameter for binomial family taken to be 1)
206s 
206s     Null deviance: 407.11  on 296  degrees of freedom
206s Residual deviance: 369.43  on 295  degrees of freedom
206s AIC: 373.43
206s 
206s Number of Fisher Scoring iterations: 4
206s 
206s 
206s > 
206s > 
206s autopkgtest [18:51:49]: test run-unit-test: -----------------------]
207s run-unit-test        PASS
207s autopkgtest [18:51:50]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
207s autopkgtest [18:51:50]: test pkg-r-autopkgtest: preparing testbed
328s autopkgtest [18:53:51]: testbed dpkg architecture: s390x
328s autopkgtest [18:53:51]: testbed apt version: 2.9.33
328s autopkgtest [18:53:51]: @@@@@@@@@@@@@@@@@@@@ test bed setup
329s autopkgtest [18:53:52]: testbed release detected to be: plucky
329s autopkgtest [18:53:52]: updating testbed package index (apt update)
330s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB]
330s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
330s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
330s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
330s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB]
330s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB]
330s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB]
331s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [113 kB]
331s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1824 B]
331s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B]
331s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [320 kB]
331s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [13.4 kB]
331s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3776 B]
331s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [240 B]
331s Fetched 1073 kB in 1s (871 kB/s)
331s Reading package lists...
332s Reading package lists...
332s Building dependency tree...
332s Reading state information...
332s Calculating upgrade...
332s Calculating upgrade...
332s The following packages were automatically installed and are no longer required:
332s   libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64
332s   linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic
332s   linux-modules-6.11.0-8-generic linux-tools-6.11.0-8
332s   linux-tools-6.11.0-8-generic
332s Use 'sudo apt autoremove' to remove them.
332s The following packages will be upgraded:
332s   pinentry-curses python3-jinja2 strace
333s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
333s Need to get 652 kB of archives.
333s After this operation, 27.6 kB of additional disk space will be used.
333s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB]
333s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x pinentry-curses s390x 1.3.1-2ubuntu3 [42.9 kB]
333s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB]
333s Fetched 652 kB in 1s (956 kB/s)
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333s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ...
333s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ...
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333s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ...
333s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ...
334s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ...
334s Setting up pinentry-curses (1.3.1-2ubuntu3) ...
334s Setting up python3-jinja2 (3.1.5-2ubuntu1) ...
334s Setting up strace (6.13+ds-1ubuntu1) ...
334s Processing triggers for man-db (2.13.0-1) ...
334s Reading package lists...
334s Building dependency tree...
334s Reading state information...
334s Solving dependencies...
335s The following packages will be REMOVED:
335s   libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64*
335s   linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
335s   linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8*
335s   linux-tools-6.11.0-8-generic*
335s 0 upgraded, 0 newly installed, 9 to remove and 5 not upgraded.
335s After this operation, 167 MB disk space will be freed.
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335s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
335s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
335s Removing libpython3.12t64:s390x (3.12.9-1) ...
335s Removing libpython3.12-stdlib:s390x (3.12.9-1) ...
335s Removing libnsl2:s390x (1.3.0-3build3) ...
335s Removing libpython3.12-minimal:s390x (3.12.9-1) ...
335s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
335s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
336s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
336s Processing triggers for libc-bin (2.41-1ubuntu1) ...
336s (Reading database ... 
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336s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ...
336s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
336s autopkgtest [18:53:59]: upgrading testbed (apt dist-upgrade and autopurge)
336s Reading package lists...
336s Building dependency tree...
336s Reading state information...
336s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
337s Starting 2 pkgProblemResolver with broken count: 0
337s Done
337s Entering ResolveByKeep
337s 
337s Calculating upgrade...
337s The following packages will be upgraded:
337s   libc-bin libc-dev-bin libc6 libc6-dev locales
337s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
337s Need to get 9512 kB of archives.
337s After this operation, 8192 B of additional disk space will be used.
337s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6-dev s390x 2.41-1ubuntu2 [1678 kB]
338s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-dev-bin s390x 2.41-1ubuntu2 [24.3 kB]
338s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6 s390x 2.41-1ubuntu2 [2892 kB]
338s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-bin s390x 2.41-1ubuntu2 [671 kB]
338s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x locales all 2.41-1ubuntu2 [4246 kB]
339s Preconfiguring packages ...
339s Fetched 9512 kB in 2s (5193 kB/s)
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339s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
339s Preparing to unpack .../libc6_2.41-1ubuntu2_s390x.deb ...
339s Unpacking libc6:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
339s Setting up libc6:s390x (2.41-1ubuntu2) ...
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339s Preparing to unpack .../libc-bin_2.41-1ubuntu2_s390x.deb ...
339s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
339s Setting up libc-bin (2.41-1ubuntu2) ...
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(Reading database ... 56326 files and directories currently installed.)
340s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ...
340s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
340s Setting up locales (2.41-1ubuntu2) ...
340s Generating locales (this might take a while)...
341s   en_US.UTF-8... done
341s Generation complete.
341s Setting up libc-dev-bin (2.41-1ubuntu2) ...
341s Setting up libc6-dev:s390x (2.41-1ubuntu2) ...
341s Processing triggers for man-db (2.13.0-1) ...
342s Processing triggers for systemd (257.3-1ubuntu3) ...
342s Reading package lists...
342s Building dependency tree...
342s Reading state information...
343s Starting pkgProblemResolver with broken count: 0
343s Starting 2 pkgProblemResolver with broken count: 0
343s Done
343s Solving dependencies...
343s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
343s autopkgtest [18:54:06]: rebooting testbed after setup commands that affected boot
366s Reading package lists...
366s Building dependency tree...
366s Reading state information...
367s Starting pkgProblemResolver with broken count: 0
367s Starting 2 pkgProblemResolver with broken count: 0
367s Done
367s The following NEW packages will be installed:
367s   build-essential cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu
367s   dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
367s   fonts-glyphicons-halflings fonts-mathjax g++ g++-14 g++-14-s390x-linux-gnu
367s   g++-s390x-linux-gnu gcc gcc-14 gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu
367s   gfortran gfortran-14 gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu
367s   icu-devtools libasan8 libblas-dev libblas3 libbz2-dev libcairo2 libcc1-0
367s   libdatrie1 libdeflate-dev libdeflate0 libfontconfig1 libfreetype6
367s   libgcc-14-dev libgfortran-14-dev libgfortran5 libgomp1 libgraphite2-3
367s   libharfbuzz0b libice6 libicu-dev libisl23 libitm1 libjbig0 libjpeg-dev
367s   libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap
367s   libjs-highlight.js libjs-jquery libjs-jquery-datatables libjs-mathjax
367s   liblapack-dev liblapack3 liblzma-dev libmpc3 libncurses-dev libnlopt0
367s   libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
367s   libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
367s   libpixman-1-0 libpkgconf3 libpng-dev libreadline-dev libsharpyuv0 libsm6
367s   libstdc++-14-dev libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev
367s   libtk8.6 libubsan1 libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1
367s   libxss1 libxt6t64 littler node-normalize.css pkg-r-autopkgtest pkgconf
367s   pkgconf-bin r-base-core r-base-dev r-cran-abind r-cran-aer r-cran-backports
367s   r-cran-bit r-cran-bit64 r-cran-boot r-cran-broom r-cran-car r-cran-cardata
367s   r-cran-caret r-cran-cellranger r-cran-class r-cran-cli r-cran-clipr
367s   r-cran-clock r-cran-codetools r-cran-coin r-cran-colorspace r-cran-conquer
367s   r-cran-cowplot r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-data.table
367s   r-cran-deriv r-cran-diagram r-cran-digest r-cran-doby r-cran-dplyr
367s   r-cran-e1071 r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver
367s   r-cran-forcats r-cran-foreach r-cran-foreign r-cran-formula r-cran-future
367s   r-cran-future.apply r-cran-generics r-cran-ggplot2 r-cran-globals
367s   r-cran-glue r-cran-gower r-cran-gtable r-cran-hardhat r-cran-haven
367s   r-cran-highr r-cran-hms r-cran-ipred r-cran-isoband r-cran-iterators
367s   r-cran-kernsmooth r-cran-knitr r-cran-labeling r-cran-lattice r-cran-lava
367s   r-cran-libcoin r-cran-lifecycle r-cran-listenv r-cran-littler r-cran-lme4
367s   r-cran-lmtest r-cran-lubridate r-cran-magrittr r-cran-mass r-cran-matrix
367s   r-cran-matrixmodels r-cran-matrixstats r-cran-mgcv r-cran-microbenchmark
367s   r-cran-minqa r-cran-mlbench r-cran-modelmetrics r-cran-modelr
367s   r-cran-modeltools r-cran-multcomp r-cran-munsell r-cran-mvtnorm r-cran-nlme
367s   r-cran-nloptr r-cran-nnet r-cran-numderiv r-cran-openxlsx r-cran-parallelly
367s   r-cran-party r-cran-pbkrtest r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten
367s   r-cran-plyr r-cran-prettyunits r-cran-proc r-cran-prodlim r-cran-progress
367s   r-cran-progressr r-cran-proxy r-cran-purrr r-cran-quantreg
367s   r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils r-cran-r6 r-cran-randomforest
367s   r-cran-rbibutils r-cran-rcolorbrewer r-cran-rcpp r-cran-rcpparmadillo
367s   r-cran-rcppeigen r-cran-rdpack r-cran-readr r-cran-readxl r-cran-recipes
367s   r-cran-reformulas r-cran-rematch r-cran-reshape2 r-cran-rio r-cran-rlang
367s   r-cran-rpart r-cran-sandwich r-cran-scales r-cran-shape r-cran-sparsem
367s   r-cran-squarem r-cran-statmod r-cran-stringi r-cran-stringr
367s   r-cran-strucchange r-cran-survival r-cran-th.data r-cran-tibble r-cran-tidyr
367s   r-cran-tidyselect r-cran-timechange r-cran-timedate r-cran-tzdb r-cran-utf8
367s   r-cran-vcd r-cran-vctrs r-cran-viridislite r-cran-vroom r-cran-withr
367s   r-cran-writexl r-cran-xfun r-cran-yaml r-cran-zip r-cran-zoo unzip
367s   x11-common xdg-utils zip zlib1g-dev
367s 0 upgraded, 253 newly installed, 0 to remove and 0 not upgraded.
367s Need to get 261 MB of archives.
367s After this operation, 627 MB of additional disk space will be used.
367s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libisl23 s390x 0.27-1 [704 kB]
368s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB]
368s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [9572 kB]
369s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14 s390x 14.2.0-17ubuntu3 [1028 B]
369s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [5556 B]
369s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x cpp s390x 4:14.2.0-1ubuntu1 [22.4 kB]
369s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libcc1-0 s390x 15-20250222-0ubuntu1 [49.2 kB]
369s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 15-20250222-0ubuntu1 [152 kB]
369s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libitm1 s390x 15-20250222-0ubuntu1 [31.2 kB]
369s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libasan8 s390x 15-20250222-0ubuntu1 [2970 kB]
369s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libubsan1 s390x 15-20250222-0ubuntu1 [1212 kB]
369s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-14-dev s390x 14.2.0-17ubuntu3 [1037 kB]
369s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [18.7 MB]
371s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14 s390x 14.2.0-17ubuntu3 [526 kB]
371s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1204 B]
371s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x gcc s390x 4:14.2.0-1ubuntu1 [5004 B]
371s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++-14-dev s390x 14.2.0-17ubuntu3 [2611 kB]
371s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [11.0 MB]
372s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14 s390x 14.2.0-17ubuntu3 [21.8 kB]
372s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x g++-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [956 B]
372s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x g++ s390x 4:14.2.0-1ubuntu1 [1080 B]
372s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x build-essential s390x 12.10ubuntu1 [4930 B]
372s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x dctrl-tools s390x 2.24-3build3 [106 kB]
372s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB]
372s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB]
372s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB]
372s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-2ubuntu1 [37.5 kB]
372s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-2ubuntu1 [150 kB]
372s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig s390x 2.15.0-2ubuntu1 [191 kB]
372s Get:30 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
372s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB]
372s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 15-20250222-0ubuntu1 [620 kB]
372s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran-14-dev s390x 14.2.0-17ubuntu3 [654 kB]
372s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [10.3 MB]
373s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14 s390x 14.2.0-17ubuntu3 [13.6 kB]
373s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1012 B]
373s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran s390x 4:14.2.0-1ubuntu1 [1160 B]
373s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x icu-devtools s390x 76.1-1ubuntu2 [225 kB]
373s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.1-2 [252 kB]
373s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libblas-dev s390x 3.12.1-2 [254 kB]
373s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libbz2-dev s390x 1.0.8-6 [39.1 kB]
373s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB]
374s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB]
374s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B]
374s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB]
374s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB]
374s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB]
374s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.23-1 [46.1 kB]
374s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate-dev s390x 1.23-1 [52.2 kB]
374s Get:50 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB]
374s Get:51 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB]
374s Get:52 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB]
374s Get:53 http://ftpmaster.internal/ubuntu plucky/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB]
374s Get:54 http://ftpmaster.internal/ubuntu plucky/main s390x libicu-dev s390x 76.1-1ubuntu2 [12.2 MB]
375s Get:55 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB]
375s Get:56 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8-dev s390x 2.1.5-3ubuntu2 [281 kB]
375s Get:57 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B]
375s Get:58 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B]
375s Get:59 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B]
375s Get:60 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
375s Get:61 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB]
375s Get:62 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
375s Get:63 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB]
375s Get:64 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.1-2 [2971 kB]
375s Get:65 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack-dev s390x 3.12.1-2 [5967 kB]
376s Get:66 http://ftpmaster.internal/ubuntu plucky/main s390x libncurses-dev s390x 6.5+20250216-2 [407 kB]
376s Get:67 http://ftpmaster.internal/ubuntu plucky/main s390x libthai-data all 0.1.29-2build1 [158 kB]
376s Get:68 http://ftpmaster.internal/ubuntu plucky/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB]
376s Get:69 http://ftpmaster.internal/ubuntu plucky/main s390x libpango-1.0-0 s390x 1.56.2-1 [253 kB]
376s Get:70 http://ftpmaster.internal/ubuntu plucky/main s390x libpangoft2-1.0-0 s390x 1.56.2-1 [50.2 kB]
376s Get:71 http://ftpmaster.internal/ubuntu plucky/main s390x libpangocairo-1.0-0 s390x 1.56.2-1 [28.2 kB]
376s Get:72 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB]
376s Get:73 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB]
376s Get:74 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-16-0 s390x 10.45-1 [259 kB]
376s Get:75 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-32-0 s390x 10.45-1 [245 kB]
376s Get:76 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-posix3 s390x 10.45-1 [7080 B]
376s Get:77 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-dev s390x 10.45-1 [899 kB]
376s Get:78 http://ftpmaster.internal/ubuntu plucky/main s390x libpkgconf3 s390x 1.8.1-4 [31.2 kB]
376s Get:79 http://ftpmaster.internal/ubuntu plucky/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB]
376s Get:80 http://ftpmaster.internal/ubuntu plucky/main s390x libpng-dev s390x 1.6.47-1 [278 kB]
376s Get:81 http://ftpmaster.internal/ubuntu plucky/main s390x libreadline-dev s390x 8.2-6 [187 kB]
376s Get:82 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB]
376s Get:83 http://ftpmaster.internal/ubuntu plucky/main s390x libsm6 s390x 2:1.2.4-1 [18.4 kB]
376s Get:84 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB]
376s Get:85 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB]
376s Get:86 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB]
376s Get:87 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB]
376s Get:88 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB]
376s Get:89 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B]
376s Get:90 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.16-1 [830 kB]
376s Get:91 http://ftpmaster.internal/ubuntu plucky/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB]
376s Get:92 http://ftpmaster.internal/ubuntu plucky/main s390x zip s390x 3.0-14ubuntu2 [187 kB]
376s Get:93 http://ftpmaster.internal/ubuntu plucky/main s390x unzip s390x 6.0-28ubuntu6 [186 kB]
376s Get:94 http://ftpmaster.internal/ubuntu plucky/main s390x xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
376s Get:95 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-core s390x 4.4.3-1 [28.6 MB]
380s Get:96 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-littler s390x 0.3.20-2 [95.0 kB]
380s Get:97 http://ftpmaster.internal/ubuntu plucky/universe s390x littler all 0.3.20-2 [2554 B]
380s Get:98 http://ftpmaster.internal/ubuntu plucky/universe s390x node-normalize.css all 8.0.1-5 [10.8 kB]
380s Get:99 http://ftpmaster.internal/ubuntu plucky/main s390x liblzma-dev s390x 5.6.4-1 [183 kB]
380s Get:100 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf-bin s390x 1.8.1-4 [21.5 kB]
380s Get:101 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf s390x 1.8.1-4 [16.7 kB]
380s Get:102 http://ftpmaster.internal/ubuntu plucky/main s390x libtirpc-dev s390x 1.3.4+ds-1.3 [196 kB]
380s Get:103 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-dev all 4.4.3-1 [4176 B]
380s Get:104 http://ftpmaster.internal/ubuntu plucky/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
380s Get:105 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-abind all 1.4-8-1 [66.9 kB]
380s Get:106 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cardata all 3.0.5-1 [1819 kB]
381s Get:107 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-formula all 1.2-5-1 [158 kB]
381s Get:108 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mass s390x 7.3-64-1 [1113 kB]
381s Get:109 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lattice s390x 0.22-6-1 [1340 kB]
381s Get:110 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-nlme s390x 3.1.167-1 [2323 kB]
381s Get:111 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-matrix s390x 1.7-3-1 [4449 kB]
382s Get:112 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mgcv s390x 1.9-1-1 [3348 kB]
382s Get:113 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-nnet s390x 7.3-20-1 [116 kB]
382s Get:114 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-boot all 1.3-31-1 [635 kB]
382s Get:115 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
382s Get:116 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcpp s390x 1.0.14-1 [2003 kB]
382s Get:117 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-minqa s390x 1.2.8-1 [139 kB]
383s Get:118 http://ftpmaster.internal/ubuntu plucky/universe s390x libnlopt0 s390x 2.7.1-6ubuntu3 [227 kB]
383s Get:119 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-nloptr s390x 2.1.1-1 [252 kB]
383s Get:120 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rbibutils s390x 2.3-1 [1041 kB]
383s Get:121 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rdpack all 2.6.2-1syncable1 [756 kB]
383s Get:122 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-reformulas all 0.4.0-1 [91.5 kB]
383s Get:123 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcppeigen s390x 0.3.4.0.2-1 [1429 kB]
383s Get:124 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-statmod s390x 1.5.0-1 [294 kB]
383s Get:125 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lme4 s390x 1.1-36-1 [4141 kB]
383s Get:126 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-backports s390x 1.5.0-2 [121 kB]
383s Get:127 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cli s390x 3.6.4-1 [1379 kB]
384s Get:128 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-generics all 0.1.3-1 [81.3 kB]
384s Get:129 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-glue s390x 1.8.0-1 [164 kB]
384s Get:130 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rlang s390x 1.1.5-1 [1713 kB]
384s Get:131 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
384s Get:132 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB]
384s Get:133 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB]
384s Get:134 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB]
384s Get:135 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pillar all 1.10.1+dfsg-1 [453 kB]
384s Get:136 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r6 all 2.6.1-1 [101 kB]
384s Get:137 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fansi s390x 1.0.5-1 [615 kB]
384s Get:138 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB]
384s Get:139 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tibble s390x 3.2.1+dfsg-3 [420 kB]
384s Get:140 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-withr all 3.0.2+dfsg-1 [214 kB]
384s Get:141 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tidyselect s390x 1.2.1+dfsg-1 [222 kB]
384s Get:142 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-dplyr s390x 1.1.4-4 [1537 kB]
384s Get:143 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-purrr s390x 1.0.4-1 [553 kB]
384s Get:144 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-stringi s390x 1.8.4-1build1 [917 kB]
384s Get:145 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-stringr all 1.5.1-1 [290 kB]
384s Get:146 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cpp11 all 0.5.2-1 [233 kB]
384s Get:147 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tidyr s390x 1.3.1-1 [1157 kB]
385s Get:148 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-broom all 1.0.7+dfsg-1 [1802 kB]
385s Get:149 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-numderiv all 2016.8-1.1-3 [115 kB]
385s Get:150 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-gtable all 0.3.6+dfsg-1 [199 kB]
385s Get:151 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-isoband s390x 0.2.7-1 [1481 kB]
385s Get:152 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-farver s390x 2.1.2-1 [1353 kB]
385s Get:153 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-labeling all 0.4.3-1 [62.1 kB]
385s Get:154 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-colorspace s390x 2.1-1+dfsg-1 [1567 kB]
385s Get:155 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-munsell all 0.5.1-1 [213 kB]
385s Get:156 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB]
385s Get:157 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-viridislite all 0.4.2-2 [1088 kB]
385s Get:158 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-scales all 1.3.0-1 [603 kB]
385s Get:159 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB]
386s Get:160 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cowplot all 1.1.3+dfsg-1 [614 kB]
386s Get:161 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-deriv all 4.1.6-1 [151 kB]
386s Get:162 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-modelr all 0.1.11-1 [195 kB]
386s Get:163 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-microbenchmark s390x 1.5.0-1 [67.2 kB]
386s Get:164 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-doby all 4.6.25-1 [4772 kB]
386s Get:165 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-evaluate all 1.0.3-1 [114 kB]
386s Get:166 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-xfun s390x 0.51+dfsg-1 [574 kB]
386s Get:167 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-highr all 0.11+dfsg-1 [38.5 kB]
386s Get:168 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-yaml s390x 2.3.10-1 [113 kB]
387s Get:169 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB]
387s Get:170 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-knitr all 1.49+dfsg-1 [859 kB]
387s Get:171 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pbkrtest all 0.5.3-1 [178 kB]
387s Get:172 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sparsem s390x 1.84-2-1 [826 kB]
387s Get:173 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-matrixmodels all 0.5-3-1 [361 kB]
387s Get:174 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-survival s390x 3.8-3-1 [8250 kB]
388s Get:175 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-matrixstats s390x 1.5.0-1 [539 kB]
388s Get:176 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcpparmadillo s390x 14.2.3-1-1 [851 kB]
388s Get:177 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-class s390x 7.3-23-1 [92.0 kB]
388s Get:178 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-proxy s390x 0.4-27-1 [182 kB]
388s Get:179 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-e1071 s390x 1.7-16-1 [572 kB]
388s Get:180 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-codetools all 0.2-20-1 [90.5 kB]
388s Get:181 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-iterators all 1.0.14-1 [336 kB]
388s Get:182 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-foreach all 1.5.2-1 [124 kB]
388s Get:183 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-data.table s390x 1.17.0+dfsg-1 [2167 kB]
389s Get:184 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-modelmetrics s390x 1.2.2.2-1build1 [122 kB]
389s Get:185 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-plyr s390x 1.8.9-1 [835 kB]
389s Get:186 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-proc s390x 1.18.5-1 [968 kB]
389s Get:187 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tzdb s390x 0.4.0-2 [514 kB]
389s Get:188 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-clock s390x 0.7.2-1 [1881 kB]
389s Get:189 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-gower s390x 1.0.2-1 [209 kB]
389s Get:190 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-hardhat all 1.4.0+dfsg-1 [565 kB]
389s Get:191 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rpart s390x 4.1.24-1 [672 kB]
389s Get:192 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-shape all 1.4.6.1-1 [749 kB]
389s Get:193 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-diagram all 1.6.5-2 [656 kB]
389s Get:194 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-kernsmooth s390x 2.23-26-1 [94.7 kB]
389s Get:195 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-digest s390x 0.6.37-1 [205 kB]
389s Get:196 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-globals all 0.16.3-1 [120 kB]
389s Get:197 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-listenv all 0.9.1+dfsg-1 [112 kB]
389s Get:198 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-parallelly s390x 1.42.0-1 [540 kB]
389s Get:199 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-future all 1.34.0+dfsg-1 [646 kB]
389s Get:200 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-future.apply all 1.11.3+dfsg-1 [175 kB]
389s Get:201 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-progressr all 0.15.1-1 [353 kB]
389s Get:202 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-squarem all 2021.1-1 [179 kB]
390s Get:203 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lava all 1.8.1+dfsg-1 [2191 kB]
390s Get:204 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-prodlim s390x 2024.06.25-1 [419 kB]
390s Get:205 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ipred s390x 0.9-15-1 [386 kB]
390s Get:206 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-timechange s390x 0.3.0-1 [185 kB]
390s Get:207 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lubridate s390x 1.9.4+dfsg-1 [1010 kB]
391s Get:208 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-timedate s390x 4041.110-1 [1209 kB]
391s Get:209 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-recipes all 1.1.0+dfsg-1 [2035 kB]
391s Get:210 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-reshape2 s390x 1.4.4-2build1 [111 kB]
391s Get:211 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-caret s390x 7.0-1+dfsg-1 [3461 kB]
391s Get:212 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-conquer s390x 1.3.3-1 [459 kB]
391s Get:213 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-quantreg s390x 6.00-1 [1457 kB]
391s Get:214 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-foreign s390x 0.8.88-1 [249 kB]
391s Get:215 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ellipsis s390x 0.3.2-2 [35.4 kB]
391s Get:216 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-forcats all 1.0.0-1 [369 kB]
391s Get:217 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-hms all 1.1.3-1 [96.5 kB]
391s Get:218 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-clipr all 0.8.0-1 [53.5 kB]
391s Get:219 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-crayon all 1.5.3-1 [165 kB]
391s Get:220 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bit s390x 4.6.0+dfsg-1 [471 kB]
391s Get:221 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bit64 s390x 4.6.0-1-1ubuntu2 [503 kB]
392s Get:222 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-prettyunits all 1.2.0-1 [162 kB]
392s Get:223 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-progress all 1.2.3-1 [91.9 kB]
392s Get:224 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-vroom s390x 1.6.5-1 [865 kB]
392s Get:225 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-readr s390x 2.1.5-1 [778 kB]
392s Get:226 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-haven s390x 2.5.4-1 [355 kB]
392s Get:227 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-curl s390x 6.2.1+dfsg-1ubuntu1 [196 kB]
392s Get:228 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rematch all 2.0.0-1 [18.3 kB]
392s Get:229 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cellranger all 1.1.0-3 [102 kB]
392s Get:230 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-readxl s390x 1.4.4-1 [360 kB]
392s Get:231 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-writexl s390x 1.5.1-1 [158 kB]
392s Get:232 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r.methodss3 all 1.8.2-1 [84.0 kB]
392s Get:233 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r.oo all 1.27.0-1 [979 kB]
392s Get:234 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r.utils all 2.13.0-1 [1423 kB]
392s Get:235 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-zip s390x 2.3.2-1 [151 kB]
392s Get:236 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-openxlsx s390x 4.2.8-1 [2045 kB]
392s Get:237 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rio all 1.2.3-1 [546 kB]
392s Get:238 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-car all 3.1-3-1 [1525 kB]
392s Get:239 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-zoo s390x 1.8-13-1 [998 kB]
392s Get:240 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lmtest s390x 0.9.40-1 [396 kB]
392s Get:241 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sandwich all 3.1-1-1 [1483 kB]
393s Get:242 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-aer all 1.2-14-1 [2597 kB]
393s Get:243 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mvtnorm s390x 1.3-3-1 [924 kB]
393s Get:244 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-libcoin s390x 1.0-10-1 [774 kB]
393s Get:245 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-modeltools all 0.2-23-2build1 [219 kB]
393s Get:246 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-th.data all 1.1-3-1 [8723 kB]
394s Get:247 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-multcomp all 1.4-28-1 [700 kB]
394s Get:248 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-coin s390x 1.4-3-1 [1562 kB]
394s Get:249 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mlbench s390x 2.1-6-1 [1050 kB]
394s Get:250 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-strucchange s390x 1.5-4-1 [943 kB]
394s Get:251 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-party s390x 1.3-18-1 [1136 kB]
394s Get:252 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-randomforest s390x 4.7-1.2-1 [224 kB]
394s Get:253 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-vcd all 1:1.4-13-1 [1281 kB]
395s Preconfiguring packages ...
395s Fetched 261 MB in 28s (9467 kB/s)
395s Selecting previously unselected package libisl23:s390x.
395s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
395s Preparing to unpack .../000-libisl23_0.27-1_s390x.deb ...
395s Unpacking libisl23:s390x (0.27-1) ...
395s Selecting previously unselected package libmpc3:s390x.
395s Preparing to unpack .../001-libmpc3_1.3.1-1build2_s390x.deb ...
395s Unpacking libmpc3:s390x (1.3.1-1build2) ...
395s Selecting previously unselected package cpp-14-s390x-linux-gnu.
395s Preparing to unpack .../002-cpp-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
395s Unpacking cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
396s Selecting previously unselected package cpp-14.
396s Preparing to unpack .../003-cpp-14_14.2.0-17ubuntu3_s390x.deb ...
396s Unpacking cpp-14 (14.2.0-17ubuntu3) ...
396s Selecting previously unselected package cpp-s390x-linux-gnu.
396s Preparing to unpack .../004-cpp-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
396s Unpacking cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
396s Selecting previously unselected package cpp.
396s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_s390x.deb ...
396s Unpacking cpp (4:14.2.0-1ubuntu1) ...
396s Selecting previously unselected package libcc1-0:s390x.
396s Preparing to unpack .../006-libcc1-0_15-20250222-0ubuntu1_s390x.deb ...
396s Unpacking libcc1-0:s390x (15-20250222-0ubuntu1) ...
396s Selecting previously unselected package libgomp1:s390x.
396s Preparing to unpack .../007-libgomp1_15-20250222-0ubuntu1_s390x.deb ...
396s Unpacking libgomp1:s390x (15-20250222-0ubuntu1) ...
396s Selecting previously unselected package libitm1:s390x.
396s Preparing to unpack .../008-libitm1_15-20250222-0ubuntu1_s390x.deb ...
396s Unpacking libitm1:s390x (15-20250222-0ubuntu1) ...
396s Selecting previously unselected package libasan8:s390x.
396s Preparing to unpack .../009-libasan8_15-20250222-0ubuntu1_s390x.deb ...
396s Unpacking libasan8:s390x (15-20250222-0ubuntu1) ...
396s Selecting previously unselected package libubsan1:s390x.
396s Preparing to unpack .../010-libubsan1_15-20250222-0ubuntu1_s390x.deb ...
396s Unpacking libubsan1:s390x (15-20250222-0ubuntu1) ...
396s Selecting previously unselected package libgcc-14-dev:s390x.
396s Preparing to unpack .../011-libgcc-14-dev_14.2.0-17ubuntu3_s390x.deb ...
396s Unpacking libgcc-14-dev:s390x (14.2.0-17ubuntu3) ...
396s Selecting previously unselected package gcc-14-s390x-linux-gnu.
396s Preparing to unpack .../012-gcc-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
396s Unpacking gcc-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
396s Selecting previously unselected package gcc-14.
396s Preparing to unpack .../013-gcc-14_14.2.0-17ubuntu3_s390x.deb ...
396s Unpacking gcc-14 (14.2.0-17ubuntu3) ...
396s Selecting previously unselected package gcc-s390x-linux-gnu.
396s Preparing to unpack .../014-gcc-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
396s Unpacking gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
396s Selecting previously unselected package gcc.
396s Preparing to unpack .../015-gcc_4%3a14.2.0-1ubuntu1_s390x.deb ...
396s Unpacking gcc (4:14.2.0-1ubuntu1) ...
396s Selecting previously unselected package libstdc++-14-dev:s390x.
396s Preparing to unpack .../016-libstdc++-14-dev_14.2.0-17ubuntu3_s390x.deb ...
396s Unpacking libstdc++-14-dev:s390x (14.2.0-17ubuntu3) ...
396s Selecting previously unselected package g++-14-s390x-linux-gnu.
396s Preparing to unpack .../017-g++-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
396s Unpacking g++-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
396s Selecting previously unselected package g++-14.
396s Preparing to unpack .../018-g++-14_14.2.0-17ubuntu3_s390x.deb ...
396s Unpacking g++-14 (14.2.0-17ubuntu3) ...
396s Selecting previously unselected package g++-s390x-linux-gnu.
396s Preparing to unpack .../019-g++-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
396s Unpacking g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
396s Selecting previously unselected package g++.
396s Preparing to unpack .../020-g++_4%3a14.2.0-1ubuntu1_s390x.deb ...
396s Unpacking g++ (4:14.2.0-1ubuntu1) ...
396s Selecting previously unselected package build-essential.
396s Preparing to unpack .../021-build-essential_12.10ubuntu1_s390x.deb ...
396s Unpacking build-essential (12.10ubuntu1) ...
396s Selecting previously unselected package dctrl-tools.
396s Preparing to unpack .../022-dctrl-tools_2.24-3build3_s390x.deb ...
396s Unpacking dctrl-tools (2.24-3build3) ...
396s Selecting previously unselected package libfreetype6:s390x.
396s Preparing to unpack .../023-libfreetype6_2.13.3+dfsg-1_s390x.deb ...
396s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ...
396s Selecting previously unselected package fonts-dejavu-mono.
396s Preparing to unpack .../024-fonts-dejavu-mono_2.37-8_all.deb ...
396s Unpacking fonts-dejavu-mono (2.37-8) ...
396s Selecting previously unselected package fonts-dejavu-core.
396s Preparing to unpack .../025-fonts-dejavu-core_2.37-8_all.deb ...
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398s Selecting previously unselected package libpcre2-16-0:s390x.
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398s Selecting previously unselected package r-cran-abind.
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399s Selecting previously unselected package libnlopt0:s390x.
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399s Selecting previously unselected package r-cran-nloptr.
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399s Selecting previously unselected package r-cran-rbibutils.
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399s Selecting previously unselected package r-cran-rdpack.
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399s Selecting previously unselected package r-cran-reformulas.
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399s Selecting previously unselected package r-cran-statmod.
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399s Selecting previously unselected package r-cran-lme4.
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399s Selecting previously unselected package r-cran-backports.
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399s Selecting previously unselected package r-cran-cli.
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399s Unpacking r-cran-glue (1.8.0-1) ...
399s Selecting previously unselected package r-cran-rlang.
399s Preparing to unpack .../129-r-cran-rlang_1.1.5-1_s390x.deb ...
399s Unpacking r-cran-rlang (1.1.5-1) ...
399s Selecting previously unselected package r-cran-lifecycle.
399s Preparing to unpack .../130-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ...
399s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ...
399s Selecting previously unselected package r-cran-magrittr.
399s Preparing to unpack .../131-r-cran-magrittr_2.0.3-1_s390x.deb ...
399s Unpacking r-cran-magrittr (2.0.3-1) ...
399s Selecting previously unselected package r-cran-utf8.
399s Preparing to unpack .../132-r-cran-utf8_1.2.4-1_s390x.deb ...
399s Unpacking r-cran-utf8 (1.2.4-1) ...
399s Selecting previously unselected package r-cran-vctrs.
399s Preparing to unpack .../133-r-cran-vctrs_0.6.5-1_s390x.deb ...
399s Unpacking r-cran-vctrs (0.6.5-1) ...
399s Selecting previously unselected package r-cran-pillar.
399s Preparing to unpack .../134-r-cran-pillar_1.10.1+dfsg-1_all.deb ...
399s Unpacking r-cran-pillar (1.10.1+dfsg-1) ...
399s Selecting previously unselected package r-cran-r6.
399s Preparing to unpack .../135-r-cran-r6_2.6.1-1_all.deb ...
399s Unpacking r-cran-r6 (2.6.1-1) ...
399s Selecting previously unselected package r-cran-fansi.
399s Preparing to unpack .../136-r-cran-fansi_1.0.5-1_s390x.deb ...
399s Unpacking r-cran-fansi (1.0.5-1) ...
399s Selecting previously unselected package r-cran-pkgconfig.
399s Preparing to unpack .../137-r-cran-pkgconfig_2.0.3-2build1_all.deb ...
399s Unpacking r-cran-pkgconfig (2.0.3-2build1) ...
399s Selecting previously unselected package r-cran-tibble.
399s Preparing to unpack .../138-r-cran-tibble_3.2.1+dfsg-3_s390x.deb ...
399s Unpacking r-cran-tibble (3.2.1+dfsg-3) ...
399s Selecting previously unselected package r-cran-withr.
399s Preparing to unpack .../139-r-cran-withr_3.0.2+dfsg-1_all.deb ...
399s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
399s Selecting previously unselected package r-cran-tidyselect.
399s Preparing to unpack .../140-r-cran-tidyselect_1.2.1+dfsg-1_s390x.deb ...
399s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ...
399s Selecting previously unselected package r-cran-dplyr.
399s Preparing to unpack .../141-r-cran-dplyr_1.1.4-4_s390x.deb ...
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399s Selecting previously unselected package r-cran-purrr.
399s Preparing to unpack .../142-r-cran-purrr_1.0.4-1_s390x.deb ...
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399s Selecting previously unselected package r-cran-stringi.
399s Preparing to unpack .../143-r-cran-stringi_1.8.4-1build1_s390x.deb ...
399s Unpacking r-cran-stringi (1.8.4-1build1) ...
399s Selecting previously unselected package r-cran-stringr.
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399s Selecting previously unselected package r-cran-cpp11.
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399s Selecting previously unselected package r-cran-tidyr.
399s Preparing to unpack .../146-r-cran-tidyr_1.3.1-1_s390x.deb ...
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399s Selecting previously unselected package r-cran-broom.
399s Preparing to unpack .../147-r-cran-broom_1.0.7+dfsg-1_all.deb ...
399s Unpacking r-cran-broom (1.0.7+dfsg-1) ...
399s Selecting previously unselected package r-cran-numderiv.
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399s Unpacking r-cran-numderiv (2016.8-1.1-3) ...
399s Selecting previously unselected package r-cran-gtable.
399s Preparing to unpack .../149-r-cran-gtable_0.3.6+dfsg-1_all.deb ...
399s Unpacking r-cran-gtable (0.3.6+dfsg-1) ...
399s Selecting previously unselected package r-cran-isoband.
399s Preparing to unpack .../150-r-cran-isoband_0.2.7-1_s390x.deb ...
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399s Selecting previously unselected package r-cran-farver.
399s Preparing to unpack .../151-r-cran-farver_2.1.2-1_s390x.deb ...
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399s Selecting previously unselected package r-cran-labeling.
399s Preparing to unpack .../152-r-cran-labeling_0.4.3-1_all.deb ...
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399s Selecting previously unselected package r-cran-colorspace.
399s Preparing to unpack .../153-r-cran-colorspace_2.1-1+dfsg-1_s390x.deb ...
399s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ...
399s Selecting previously unselected package r-cran-munsell.
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399s Selecting previously unselected package r-cran-rcolorbrewer.
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399s Selecting previously unselected package r-cran-viridislite.
399s Preparing to unpack .../156-r-cran-viridislite_0.4.2-2_all.deb ...
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399s Selecting previously unselected package r-cran-scales.
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399s Selecting previously unselected package r-cran-ggplot2.
399s Preparing to unpack .../158-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ...
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399s Selecting previously unselected package r-cran-cowplot.
399s Preparing to unpack .../159-r-cran-cowplot_1.1.3+dfsg-1_all.deb ...
399s Unpacking r-cran-cowplot (1.1.3+dfsg-1) ...
399s Selecting previously unselected package r-cran-deriv.
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399s Unpacking r-cran-deriv (4.1.6-1) ...
399s Selecting previously unselected package r-cran-modelr.
399s Preparing to unpack .../161-r-cran-modelr_0.1.11-1_all.deb ...
399s Unpacking r-cran-modelr (0.1.11-1) ...
399s Selecting previously unselected package r-cran-microbenchmark.
399s Preparing to unpack .../162-r-cran-microbenchmark_1.5.0-1_s390x.deb ...
399s Unpacking r-cran-microbenchmark (1.5.0-1) ...
399s Selecting previously unselected package r-cran-doby.
399s Preparing to unpack .../163-r-cran-doby_4.6.25-1_all.deb ...
399s Unpacking r-cran-doby (4.6.25-1) ...
399s Selecting previously unselected package r-cran-evaluate.
399s Preparing to unpack .../164-r-cran-evaluate_1.0.3-1_all.deb ...
399s Unpacking r-cran-evaluate (1.0.3-1) ...
400s Selecting previously unselected package r-cran-xfun.
400s Preparing to unpack .../165-r-cran-xfun_0.51+dfsg-1_s390x.deb ...
400s Unpacking r-cran-xfun (0.51+dfsg-1) ...
400s Selecting previously unselected package r-cran-highr.
400s Preparing to unpack .../166-r-cran-highr_0.11+dfsg-1_all.deb ...
400s Unpacking r-cran-highr (0.11+dfsg-1) ...
400s Selecting previously unselected package r-cran-yaml.
400s Preparing to unpack .../167-r-cran-yaml_2.3.10-1_s390x.deb ...
400s Unpacking r-cran-yaml (2.3.10-1) ...
400s Selecting previously unselected package libjs-mathjax.
400s Preparing to unpack .../168-libjs-mathjax_2.7.9+dfsg-1_all.deb ...
400s Unpacking libjs-mathjax (2.7.9+dfsg-1) ...
400s Selecting previously unselected package r-cran-knitr.
400s Preparing to unpack .../169-r-cran-knitr_1.49+dfsg-1_all.deb ...
400s Unpacking r-cran-knitr (1.49+dfsg-1) ...
400s Selecting previously unselected package r-cran-pbkrtest.
400s Preparing to unpack .../170-r-cran-pbkrtest_0.5.3-1_all.deb ...
400s Unpacking r-cran-pbkrtest (0.5.3-1) ...
400s Selecting previously unselected package r-cran-sparsem.
400s Preparing to unpack .../171-r-cran-sparsem_1.84-2-1_s390x.deb ...
400s Unpacking r-cran-sparsem (1.84-2-1) ...
400s Selecting previously unselected package r-cran-matrixmodels.
400s Preparing to unpack .../172-r-cran-matrixmodels_0.5-3-1_all.deb ...
400s Unpacking r-cran-matrixmodels (0.5-3-1) ...
400s Selecting previously unselected package r-cran-survival.
400s Preparing to unpack .../173-r-cran-survival_3.8-3-1_s390x.deb ...
400s Unpacking r-cran-survival (3.8-3-1) ...
400s Selecting previously unselected package r-cran-matrixstats.
400s Preparing to unpack .../174-r-cran-matrixstats_1.5.0-1_s390x.deb ...
400s Unpacking r-cran-matrixstats (1.5.0-1) ...
400s Selecting previously unselected package r-cran-rcpparmadillo.
400s Preparing to unpack .../175-r-cran-rcpparmadillo_14.2.3-1-1_s390x.deb ...
400s Unpacking r-cran-rcpparmadillo (14.2.3-1-1) ...
400s Selecting previously unselected package r-cran-class.
400s Preparing to unpack .../176-r-cran-class_7.3-23-1_s390x.deb ...
400s Unpacking r-cran-class (7.3-23-1) ...
400s Selecting previously unselected package r-cran-proxy.
400s Preparing to unpack .../177-r-cran-proxy_0.4-27-1_s390x.deb ...
400s Unpacking r-cran-proxy (0.4-27-1) ...
400s Selecting previously unselected package r-cran-e1071.
400s Preparing to unpack .../178-r-cran-e1071_1.7-16-1_s390x.deb ...
400s Unpacking r-cran-e1071 (1.7-16-1) ...
400s Selecting previously unselected package r-cran-codetools.
400s Preparing to unpack .../179-r-cran-codetools_0.2-20-1_all.deb ...
400s Unpacking r-cran-codetools (0.2-20-1) ...
400s Selecting previously unselected package r-cran-iterators.
400s Preparing to unpack .../180-r-cran-iterators_1.0.14-1_all.deb ...
400s Unpacking r-cran-iterators (1.0.14-1) ...
400s Selecting previously unselected package r-cran-foreach.
400s Preparing to unpack .../181-r-cran-foreach_1.5.2-1_all.deb ...
400s Unpacking r-cran-foreach (1.5.2-1) ...
400s Selecting previously unselected package r-cran-data.table.
400s Preparing to unpack .../182-r-cran-data.table_1.17.0+dfsg-1_s390x.deb ...
400s Unpacking r-cran-data.table (1.17.0+dfsg-1) ...
400s Selecting previously unselected package r-cran-modelmetrics.
400s Preparing to unpack .../183-r-cran-modelmetrics_1.2.2.2-1build1_s390x.deb ...
400s Unpacking r-cran-modelmetrics (1.2.2.2-1build1) ...
400s Selecting previously unselected package r-cran-plyr.
400s Preparing to unpack .../184-r-cran-plyr_1.8.9-1_s390x.deb ...
400s Unpacking r-cran-plyr (1.8.9-1) ...
400s Selecting previously unselected package r-cran-proc.
400s Preparing to unpack .../185-r-cran-proc_1.18.5-1_s390x.deb ...
400s Unpacking r-cran-proc (1.18.5-1) ...
400s Selecting previously unselected package r-cran-tzdb.
400s Preparing to unpack .../186-r-cran-tzdb_0.4.0-2_s390x.deb ...
400s Unpacking r-cran-tzdb (0.4.0-2) ...
400s Selecting previously unselected package r-cran-clock.
400s Preparing to unpack .../187-r-cran-clock_0.7.2-1_s390x.deb ...
400s Unpacking r-cran-clock (0.7.2-1) ...
400s Selecting previously unselected package r-cran-gower.
400s Preparing to unpack .../188-r-cran-gower_1.0.2-1_s390x.deb ...
400s Unpacking r-cran-gower (1.0.2-1) ...
400s Selecting previously unselected package r-cran-hardhat.
400s Preparing to unpack .../189-r-cran-hardhat_1.4.0+dfsg-1_all.deb ...
400s Unpacking r-cran-hardhat (1.4.0+dfsg-1) ...
400s Selecting previously unselected package r-cran-rpart.
400s Preparing to unpack .../190-r-cran-rpart_4.1.24-1_s390x.deb ...
400s Unpacking r-cran-rpart (4.1.24-1) ...
400s Selecting previously unselected package r-cran-shape.
400s Preparing to unpack .../191-r-cran-shape_1.4.6.1-1_all.deb ...
400s Unpacking r-cran-shape (1.4.6.1-1) ...
400s Selecting previously unselected package r-cran-diagram.
401s Preparing to unpack .../192-r-cran-diagram_1.6.5-2_all.deb ...
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401s Selecting previously unselected package r-cran-kernsmooth.
401s Preparing to unpack .../193-r-cran-kernsmooth_2.23-26-1_s390x.deb ...
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401s Selecting previously unselected package r-cran-digest.
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401s Selecting previously unselected package r-cran-globals.
401s Preparing to unpack .../195-r-cran-globals_0.16.3-1_all.deb ...
401s Unpacking r-cran-globals (0.16.3-1) ...
401s Selecting previously unselected package r-cran-listenv.
401s Preparing to unpack .../196-r-cran-listenv_0.9.1+dfsg-1_all.deb ...
401s Unpacking r-cran-listenv (0.9.1+dfsg-1) ...
401s Selecting previously unselected package r-cran-parallelly.
401s Preparing to unpack .../197-r-cran-parallelly_1.42.0-1_s390x.deb ...
401s Unpacking r-cran-parallelly (1.42.0-1) ...
401s Selecting previously unselected package r-cran-future.
401s Preparing to unpack .../198-r-cran-future_1.34.0+dfsg-1_all.deb ...
401s Unpacking r-cran-future (1.34.0+dfsg-1) ...
401s Selecting previously unselected package r-cran-future.apply.
401s Preparing to unpack .../199-r-cran-future.apply_1.11.3+dfsg-1_all.deb ...
401s Unpacking r-cran-future.apply (1.11.3+dfsg-1) ...
401s Selecting previously unselected package r-cran-progressr.
401s Preparing to unpack .../200-r-cran-progressr_0.15.1-1_all.deb ...
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401s Selecting previously unselected package r-cran-squarem.
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401s Selecting previously unselected package r-cran-lava.
401s Preparing to unpack .../202-r-cran-lava_1.8.1+dfsg-1_all.deb ...
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401s Selecting previously unselected package r-cran-prodlim.
401s Preparing to unpack .../203-r-cran-prodlim_2024.06.25-1_s390x.deb ...
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401s Selecting previously unselected package r-cran-ipred.
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401s Selecting previously unselected package r-cran-timechange.
401s Preparing to unpack .../205-r-cran-timechange_0.3.0-1_s390x.deb ...
401s Unpacking r-cran-timechange (0.3.0-1) ...
401s Selecting previously unselected package r-cran-lubridate.
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401s Unpacking r-cran-lubridate (1.9.4+dfsg-1) ...
401s Selecting previously unselected package r-cran-timedate.
401s Preparing to unpack .../207-r-cran-timedate_4041.110-1_s390x.deb ...
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401s Selecting previously unselected package r-cran-recipes.
401s Preparing to unpack .../208-r-cran-recipes_1.1.0+dfsg-1_all.deb ...
401s Unpacking r-cran-recipes (1.1.0+dfsg-1) ...
401s Selecting previously unselected package r-cran-reshape2.
401s Preparing to unpack .../209-r-cran-reshape2_1.4.4-2build1_s390x.deb ...
401s Unpacking r-cran-reshape2 (1.4.4-2build1) ...
401s Selecting previously unselected package r-cran-caret.
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401s Selecting previously unselected package r-cran-conquer.
401s Preparing to unpack .../211-r-cran-conquer_1.3.3-1_s390x.deb ...
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401s Selecting previously unselected package r-cran-quantreg.
401s Preparing to unpack .../212-r-cran-quantreg_6.00-1_s390x.deb ...
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401s Selecting previously unselected package r-cran-foreign.
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401s Unpacking r-cran-foreign (0.8.88-1) ...
401s Selecting previously unselected package r-cran-ellipsis.
401s Preparing to unpack .../214-r-cran-ellipsis_0.3.2-2_s390x.deb ...
401s Unpacking r-cran-ellipsis (0.3.2-2) ...
401s Selecting previously unselected package r-cran-forcats.
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401s Selecting previously unselected package r-cran-hms.
401s Preparing to unpack .../216-r-cran-hms_1.1.3-1_all.deb ...
401s Unpacking r-cran-hms (1.1.3-1) ...
401s Selecting previously unselected package r-cran-clipr.
401s Preparing to unpack .../217-r-cran-clipr_0.8.0-1_all.deb ...
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401s Selecting previously unselected package r-cran-crayon.
401s Preparing to unpack .../218-r-cran-crayon_1.5.3-1_all.deb ...
401s Unpacking r-cran-crayon (1.5.3-1) ...
401s Selecting previously unselected package r-cran-bit.
401s Preparing to unpack .../219-r-cran-bit_4.6.0+dfsg-1_s390x.deb ...
401s Unpacking r-cran-bit (4.6.0+dfsg-1) ...
401s Selecting previously unselected package r-cran-bit64.
401s Preparing to unpack .../220-r-cran-bit64_4.6.0-1-1ubuntu2_s390x.deb ...
401s Unpacking r-cran-bit64 (4.6.0-1-1ubuntu2) ...
401s Selecting previously unselected package r-cran-prettyunits.
401s Preparing to unpack .../221-r-cran-prettyunits_1.2.0-1_all.deb ...
401s Unpacking r-cran-prettyunits (1.2.0-1) ...
401s Selecting previously unselected package r-cran-progress.
401s Preparing to unpack .../222-r-cran-progress_1.2.3-1_all.deb ...
401s Unpacking r-cran-progress (1.2.3-1) ...
401s Selecting previously unselected package r-cran-vroom.
401s Preparing to unpack .../223-r-cran-vroom_1.6.5-1_s390x.deb ...
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401s Selecting previously unselected package r-cran-readr.
401s Preparing to unpack .../224-r-cran-readr_2.1.5-1_s390x.deb ...
401s Unpacking r-cran-readr (2.1.5-1) ...
401s Selecting previously unselected package r-cran-haven.
401s Preparing to unpack .../225-r-cran-haven_2.5.4-1_s390x.deb ...
401s Unpacking r-cran-haven (2.5.4-1) ...
401s Selecting previously unselected package r-cran-curl.
401s Preparing to unpack .../226-r-cran-curl_6.2.1+dfsg-1ubuntu1_s390x.deb ...
401s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ...
401s Selecting previously unselected package r-cran-rematch.
401s Preparing to unpack .../227-r-cran-rematch_2.0.0-1_all.deb ...
401s Unpacking r-cran-rematch (2.0.0-1) ...
401s Selecting previously unselected package r-cran-cellranger.
401s Preparing to unpack .../228-r-cran-cellranger_1.1.0-3_all.deb ...
401s Unpacking r-cran-cellranger (1.1.0-3) ...
401s Selecting previously unselected package r-cran-readxl.
401s Preparing to unpack .../229-r-cran-readxl_1.4.4-1_s390x.deb ...
401s Unpacking r-cran-readxl (1.4.4-1) ...
401s Selecting previously unselected package r-cran-writexl.
401s Preparing to unpack .../230-r-cran-writexl_1.5.1-1_s390x.deb ...
401s Unpacking r-cran-writexl (1.5.1-1) ...
401s Selecting previously unselected package r-cran-r.methodss3.
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401s Selecting previously unselected package r-cran-r.oo.
401s Preparing to unpack .../232-r-cran-r.oo_1.27.0-1_all.deb ...
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401s Selecting previously unselected package r-cran-r.utils.
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404s Setting up r-cran-rio (1.2.3-1) ...
404s Setting up r-cran-quantreg (6.00-1) ...
404s Setting up r-cran-modelr (0.1.11-1) ...
404s Setting up r-cran-doby (4.6.25-1) ...
404s Setting up r-cran-pbkrtest (0.5.3-1) ...
404s Setting up r-cran-car (3.1-3-1) ...
404s Setting up r-cran-aer (1.2-14-1) ...
404s Processing triggers for libc-bin (2.41-1ubuntu2) ...
404s Processing triggers for man-db (2.13.0-1) ...
404s Processing triggers for install-info (7.1.1-1) ...
407s autopkgtest [18:55:10]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
407s autopkgtest [18:55:10]: test pkg-r-autopkgtest: [-----------------------
407s Test: Try to load the R library party
407s 
407s R version 4.4.3 (2025-02-28) -- "Trophy Case"
407s Copyright (C) 2025 The R Foundation for Statistical Computing
407s Platform: s390x-ibm-linux-gnu
407s 
407s R is free software and comes with ABSOLUTELY NO WARRANTY.
407s You are welcome to redistribute it under certain conditions.
407s Type 'license()' or 'licence()' for distribution details.
407s 
407s R is a collaborative project with many contributors.
407s Type 'contributors()' for more information and
407s 'citation()' on how to cite R or R packages in publications.
407s 
407s Type 'demo()' for some demos, 'help()' for on-line help, or
407s 'help.start()' for an HTML browser interface to help.
407s Type 'q()' to quit R.
407s 
407s > library('party')
407s Loading required package: grid
407s Loading required package: mvtnorm
407s Loading required package: modeltools
407s Loading required package: stats4
407s Loading required package: strucchange
407s Loading required package: zoo
407s 
407s Attaching package: ‘zoo’
407s 
407s The following objects are masked from ‘package:base’:
407s 
407s     as.Date, as.Date.numeric
407s 
407s Loading required package: sandwich
408s > 
408s > 
408s Other tests are currently unsupported!
408s They will be progressively added.
408s autopkgtest [18:55:11]: test pkg-r-autopkgtest: -----------------------]
409s pkg-r-autopkgtest    PASS
409s autopkgtest [18:55:12]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
409s autopkgtest [18:55:12]: @@@@@@@@@@@@@@@@@@@@ summary
409s run-unit-test        PASS
409s pkg-r-autopkgtest    PASS
427s nova [W] Using flock in prodstack6-s390x
427s flock: timeout while waiting to get lock
427s Creating nova instance adt-plucky-s390x-r-cran-party-20250315-181508-juju-7f2275-prod-proposed-migration-environment-20-be52deb4-8045-4b8e-874e-6f1fce30589c from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)...
427s nova [W] Timed out waiting for d631e540-2e1e-4ae7-aea7-334c79c70513 to get deleted.
427s nova [W] Using flock in prodstack6-s390x
427s Creating nova instance adt-plucky-s390x-r-cran-party-20250315-181508-juju-7f2275-prod-proposed-migration-environment-20-be52deb4-8045-4b8e-874e-6f1fce30589c from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)...
427s nova [W] Timed out waiting for bf219af8-0799-4cf5-8d71-885509472169 to get deleted.