0s autopkgtest: DBG: testbed init 0s autopkgtest [03:23:17]: starting date and time: 2025-02-04 03:23:17+0000 0s autopkgtest [03:23:17]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [03:23:17]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.52nut64i/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-testthat --apt-upgrade r-cran-msm --debug --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-testthat/3.2.3-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-s390x-29.secgroup --name adt-plucky-s390x-r-cran-msm-20250204-032317-juju-7f2275-prod-proposed-migration-environment-15-da0b1dd2-22cc-4a09-b8b0-daf308baccc9 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 0s autopkgtest: DBG: got reply from testbed: ok 0s autopkgtest: DBG: testbed open, scratch=None 0s autopkgtest: DBG: sending command to testbed: open 321s autopkgtest: DBG: got reply from testbed: ok /tmp/autopkgtest.ByfMJs 321s autopkgtest: DBG: sending command to testbed: print-execute-command 321s autopkgtest: DBG: got reply from testbed: ok /tmp/autopkgtest-ssh.h_c5d820/runcmd 321s autopkgtest: DBG: sending command to testbed: capabilities 321s autopkgtest: DBG: got reply from testbed: ok revert-full-system isolation-machine suggested-normal-user=ubuntu reboot revert root-on-testbed 321s autopkgtest: DBG: testbed capabilities: ['revert-full-system', 'isolation-machine', 'suggested-normal-user=ubuntu', 'reboot', 'revert', 'root-on-testbed', 'has_internet'] 321s autopkgtest: DBG: testbed command ['mkdir', '-p', '/tmp/autopkgtest.ByfMJs'], kind short, sout raw, serr pipe, env [] 321s autopkgtest: DBG: testbed command exited with code 0 321s autopkgtest: DBG: sending command to testbed: copydown /home/ubuntu/autopkgtest/lib/in-testbed/wrapper.sh /tmp/autopkgtest.ByfMJs/wrapper.sh 322s autopkgtest: DBG: got reply from testbed: ok 322s autopkgtest: DBG: testbed command ['chmod', '-R', '0755', '--', '/tmp/autopkgtest.ByfMJs/wrapper.sh'], kind short, sout raw, serr pipe, env [] 322s autopkgtest: DBG: testbed command exited with code 0 322s autopkgtest: DBG: testbed command ['dpkg', '--print-architecture'], kind short, sout pipe, serr pipe, env [] 322s autopkgtest: DBG: testbed command exited with code 0 322s autopkgtest [03:28:39]: testbed dpkg architecture: s390x 322s autopkgtest: DBG: testbed command ['dpkg-query', '-W', '-f', '${Version}', 'apt'], kind short, sout pipe, serr pipe, env [] 322s autopkgtest: DBG: testbed command exited with code 0 322s autopkgtest [03:28:39]: testbed apt version: 2.9.18 322s autopkgtest: DBG: testbed command ['sh', '-ec', 'command -v eatmydata'], kind short, sout pipe, serr pipe, env [] 322s autopkgtest: DBG: testbed command exited with code 0 322s autopkgtest: DBG: testbed has eatmydata 322s autopkgtest: DBG: testbed command ['mkdir', '-p', '/etc/apt/preferences.d'], kind short, sout raw, serr pipe, env [] 322s autopkgtest: DBG: testbed command exited with code 0 322s autopkgtest [03:28:39]: @@@@@@@@@@@@@@@@@@@@ test bed setup 322s autopkgtest: DBG: testbed command ['sh', '-ec', '#!/bin/sh\n# Copyright © 2006-2018 Canonical Ltd.\n# Copyright © 2015-2017 Martin Pitt\n# Copyright © 2017 Steve Langasek\n# Copyright © 2017-2022 Paul Gevers\n# Copyright © 2018 Simon McVittie\n# SPDX-License-Identifier: GPL-2.0-or-later\n\n# This script returns the first suite found in apt sources. We can\'t just rely\n# on /etc/os-release because it doesn\'t allow to distinguish between Debian\n# unstable and testing.\n#\n# This release detection logic should be kept in sync with similar code in the\n# setup-testbed script.\n#\n# For more information on APT data sources see sources.list(5).\n\n# Usage $0\n\nset -eux\n\ndistro=UNKNOWN\nif [ -r /etc/os-release ]; then\n # shellcheck disable=SC1091\n distro=$(. /etc/os-release && echo "${ID:-$distro}")\nfi\n\n# Try guessing the default release from deb822-style format sources.\n#\n# While not mandatory, APT upstream expects distros to follow the\n# .sources naming pattern for the default deb822 sources.\napt_sources="/etc/apt/sources.list.d/$distro.sources"\nif [ -r "$apt_sources" ]; then\n release=$(sed -En \'s/^Suites:\\s*(\\w+).*/\\1/Ip\' "$apt_sources" | head -n1)\n [ -n "$release" ] && echo "$release" && exit\nfi\n\n# Try guessing the default release from one-line-style format sources.\napt_sources=/etc/apt/sources.list\nif [ -r "$apt_sources" ]; then\n release=$(sed -En \'/^(deb|deb-src) +(\\[.*\\] *)?(http|https|file):/ { s/\\[.*\\] +//; s/^[^ ]+ +[^ ]* +([^ ]+) +.*$/\\1/p }\' "$apt_sources" | head -n1)\n [ -n "$release" ] && echo "$release" && exit\nfi\n\n# Could not guess the default release\necho "Could not guess the default release from the APT sources." >&2\nexit 1\n'], kind short, sout pipe, serr pipe, env [] 323s autopkgtest: DBG: testbed command exited with code 0 323s autopkgtest [03:28:40]: testbed release detected to be: None 323s autopkgtest: DBG: testbed command ['sh', '-ec', '#!/bin/sh\n# SPDX-License-Identifier: GPL-2.0-or-later\n\n# This script returns the list of configured "deb" sources in one-line-style\n# source lists (/etc/apt/sources.list, /etc/apt/sources.list.d/*.list).\n# See sources.list(5) for more information on the APT source list formats.\n#\n# This script takes no arguments.\n\nset -eu\n\n# grep(1) returns 1 if no lines were selected from the input files, which\n# can happen if there are .list files, but they contain no "deb" entries.\n# We don\'t want to fail in this case, hence the "|| true", which we put\n# in a subshell because we want it to affect only the grep invocation.\n{\n if [ -f /etc/apt/sources.list ]; then\n printf \'%s\\0\' /etc/apt/sources.list\n fi\n if [ -d /etc/apt/sources.list.d ]; then\n find /etc/apt/sources.list.d -maxdepth 1 -type f -regex \'.*/[a-zA-Z0-9_.-]+\\.list\' -print0 \\\n | LC_ALL=C sort --zero-terminated\n fi\n} | xargs -0 --no-run-if-empty -- sh -c \'grep -h "^deb " "$@" || true\' "$(basename "$0")"\n'], kind short, sout pipe, serr pipe, env [] 323s autopkgtest: DBG: testbed command exited with code 0 323s autopkgtest: DBG: testbed command ['sh', '-ec', '#!/bin/sh\n# SPDX-License-Identifier: GPL-2.0-or-later\n\n# This script returns the list of configured sources in deb822-style source\n# lists (/etc/apt/sources.list.d/*.sources). Sources are not stripped out of\n# comments, extra blank lines or similar: the output of this script is meant to\n# be consumed by a deb822 parser that is able to correctly handle those.\n# See sources.list(5) for more information on the APT source list formats.\n#\n# This script takes no arguments.\n\nset -eu\n\n# Awk concatenates files making sure stanzas from separate files are separated\n# by a blank line, even if there are no newlines at EOF in the .sources files.\nif [ -d /etc/apt/sources.list.d ]; then\n find /etc/apt/sources.list.d -maxdepth 1 -type f -regex \'.*/[a-zA-Z0-9_.-]+\\.sources\' -print0 \\\n | LC_ALL=C sort --zero-terminated \\\n | xargs -0 --no-run-if-empty -- awk \'FNR == 1 && NR != 1 { print "" } { print }\'\nfi\n'], kind short, sout pipe, serr pipe, env [] 323s autopkgtest: DBG: testbed command exited with code 0 323s autopkgtest: DBG: adding APT source: Types: deb deb-src 323s URIs: http://ftpmaster.internal/ubuntu/ 323s Suites: plucky-proposed 323s Components: main restricted universe multiverse 323s Signed-By: /usr/share/keyrings/ubuntu-archive-keyring.gpg 323s autopkgtest: DBG: testbed command ['sh', '-ec', '"$@" >> "/etc/apt/sources.list.d/autopkgtest-add-apt-release-plucky-proposed.sources"', 'add_apt_source', 'printf', '%s\\n', 'Types: deb deb-src\nURIs: http://ftpmaster.internal/ubuntu/\nSuites: plucky-proposed\nComponents: main restricted universe multiverse\nSigned-By: /usr/share/keyrings/ubuntu-archive-keyring.gpg\n'], kind short, sout raw, serr pipe, env [] 323s autopkgtest: DBG: testbed command exited with code 0 323s autopkgtest: DBG: adding APT preference to autopkgtest-zz-plucky-proposed-baseline.pref: 323s Package: * 323s Pin: release plucky-proposed 323s Pin-Priority: 500 323s autopkgtest: DBG: testbed command ['sh', '-ec', '"$@" > "/etc/apt/preferences.d/autopkgtest-zz-plucky-proposed-baseline.pref"', 'add_apt_preference', 'printf', '%s\\n', 'Package: *\nPin: release plucky-proposed\nPin-Priority: 500'], kind short, sout raw, serr pipe, env [] 323s autopkgtest: DBG: testbed command exited with code 0 323s autopkgtest [03:28:40]: updating testbed package index (apt update) 323s autopkgtest: DBG: testbed command ['/bin/sh', '-ec', '"$@" 3>&2 2>&1', 'run_apt_command', '/usr/bin/eatmydata', 'apt-get', '--quiet', '--assume-yes', '-o=APT::Status-Fd=3', '-o=APT::Install-Recommends=false', '-o=Dpkg::Options::=--force-confnew', '-o=Debug::pkgProblemResolver=true', 'update'], kind install, sout raw, serr pipe, env ['DEBIAN_FRONTEND=noninteractive', 'APT_LISTBUGS_FRONTEND=none', 'APT_LISTCHANGES_FRONTEND=none'] 324s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB] 324s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 324s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 324s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 324s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.8 kB] 324s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [81.7 kB] 325s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [904 kB] 326s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [113 kB] 326s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [794 kB] 327s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3348 B] 327s Fetched 2021 kB in 3s (617 kB/s) 327s Reading package lists... 327s autopkgtest: DBG: testbed command exited with code 0 327s autopkgtest: DBG: adding APT preference to autopkgtest-plucky-proposed.pref: 327s Package: * 327s Pin: release plucky-proposed 327s Pin-Priority: 100 327s 327s Package: src:r-cran-testthat:any 327s Pin: release plucky-proposed 327s Pin-Priority: 995 327s autopkgtest: DBG: testbed command ['sh', '-ec', '"$@" > "/etc/apt/preferences.d/autopkgtest-plucky-proposed.pref"', 'add_apt_preference', 'printf', '%s\\n', 'Package: *\nPin: release plucky-proposed\nPin-Priority: 100\n\nPackage: src:r-cran-testthat:any\nPin: release plucky-proposed\nPin-Priority: 995'], kind short, sout raw, serr pipe, env [] 328s autopkgtest: DBG: testbed command exited with code 0 328s autopkgtest: DBG: testbed command ['bash', '-ec', 'for d in /boot /boot/efi /boot/grub /etc/init /etc/init.d /etc/systemd/system /lib/systemd/system; do [ ! -d $d ] || touch -r $d /tmp/autopkgtest.ByfMJs/${d//\\//_}.stamp; done'], kind short, sout raw, serr pipe, env [] 328s autopkgtest: DBG: testbed command exited with code 0 328s autopkgtest: DBG: testbed command ['sh', '-ec', '#!/bin/sh\n# Canonical/Ubuntu specific testbed setup\n\nset -x\n\nRELEASE=$(lsb_release --codename --short 2>/dev/null)\n\n# Make the installed package versions match what is available from the configured\n# repositories, even if a downgrade is required.\n#\n# We may end up with images with packages newer than those available from the\n# repositories when opening a new release (images are created using the\n# previous release dailies as a base, which may include 0-day SRUs, or\n# Launchpad may fail to copy packages, see openssl 3.0.8-1ubuntu2), or when\n# package versions are pulled from the archive.\n#\n# Note: \'release a=\' matches the Suite field in the repository Release file.\ncat >/etc/apt/preferences.d/force-downgrade-to-release.pref <= Focal).\n#\n# Note: autoremove/--autoremove always runs on the entire set of installed\n# packages. Together with --autopurge/purge each removal becomes a purge.\n#\n# Removing \'?obsolete\' packages may remove the running kernel. This is not\n# expected to be an issue.\nif /usr/lib/apt/apt-helper analyze-pattern \'?true\' >/dev/null 2>&1; then\n # DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove \'?obsolete\'\n # Avoid removing the running kernel\n running_kernel_pattern="^linux-.*$(uname -r | sed \'s/\\./\\\\./g\').*"\n obsolete_pkgs="$(apt list \'?obsolete\' 2>/dev/null \\\n | tail -n+2 \\\n | cut -d\'/\' -f1 \\\n | grep -v "${running_kernel_pattern}" || true)"\n DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove ${obsolete_pkgs}\nelse\n # We\'re on an older release (analyze-pattern is not available).\n # Still do an autopurge to get rid of packages that got orphaned\n # by downgrades.\n eatmydata apt-get -y autoremove --purge\nfi\n\n# compatibility with old Jenkins testbeds for trusty\nif grep -q trusty /etc/lsb-release; then apt-get update || (sleep 10; apt-get update); apt-get install -y build-essential; fi\n\n# these packages really break tests, purge them if we use standard cloud images\n# (on lcy01)\nfor p in unattended-upgrades lxd lxd-client snapd; do\n [ ! -d /usr/share/doc/$p ] || $(which eatmydata || true) apt-get purge --auto-remove -y $p\ndone\n\nif type iptables >/dev/null 2>&1; then\n cat < /etc/rc.local\n#!/bin/sh\n\n# work around broken PTMU; LP: #1572026, RT#90771\niptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu || true\n\n# These addresses are used at least by rust-reqwest and should not be reachable\n# See https://bugs.launchpad.net/ubuntu/+source/rust-reqwest/+bug/2080346\niptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP || true\niptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP || true\nEOF\n chmod 755 /etc/rc.local\n # shellcheck disable=SC1091\n . /etc/rc.local\nfi\n\n# work around broken tty on ppc64el instances (LP: #1607075)\nif [ "$(uname -m)" = ppc64le ] && [ "$(systemctl is-active keyboard-setup.service 2>/dev/null|| true)" = failed ]; then\n systemctl reset-failed keyboard-setup.service\n systemctl mask keyboard-setup.service\nfi\n\n# work around late urandom pool initialization (LP: #1622893)\nif [ -d /run/systemd/system ] && systemd-detect-virt --quiet --vm; then\n mkdir -p /etc/systemd/system/systemd-random-seed.service.d/\n cat < /etc/systemd/system/systemd-random-seed.service.d/fakeentropy.conf\n[Service]\nExecStart=/usr/bin/perl -E \'open \\$\\$f, "/bin/bash" or die; open \\$\\$rnd, ">/dev/random" or die; for (\\$\\$i = 0; \\$\\$i < 10; ++\\$\\$i) {read \\$\\$f, \\$\\$d, 64; ioctl \\$\\$rnd, 0x40085203, pack("ii", 64*8, 64) . \\$\\$d}\'\nEOF\nfi\n\n# set compressor to lz4 where supported, we care about compression speed\nif grep -q lz4 /etc/initramfs-tools/initramfs.conf; then\n echo COMPRESS=lz4 > /etc/initramfs-tools/conf.d/lz4\nfi'], kind install, sout raw, serr raw, env ['AUTOPKGTEST_IS_SETUP_COMMAND=1', 'AUTOPKGTEST_NORMAL_USER=ubuntu', 'ADT_NORMAL_USER=ubuntu'] 328s + lsb_release --codename --short 328s + RELEASE=plucky 328s + cat 328s + [ plucky != trusty ] 328s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 328s Reading package lists... 328s Building dependency tree... 328s Reading state information... 328s Calculating upgrade... 328s The following packages were automatically installed and are no longer required: 328s linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic 328s linux-modules-6.11.0-8-generic linux-tools-6.11.0-8 328s linux-tools-6.11.0-8-generic 328s Use 'sudo apt autoremove' to remove them. 328s The following packages will be upgraded: 328s wireless-regdb 328s 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 328s Need to get 7214 B of archives. 328s After this operation, 0 B of additional disk space will be used. 328s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x wireless-regdb all 2024.10.07-0ubuntu1 [7214 B] 329s Fetched 7214 B in 0s (50.8 kB/s) 329s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80938 files and directories currently installed.) 329s Preparing to unpack .../wireless-regdb_2024.10.07-0ubuntu1_all.deb ... 329s Unpacking wireless-regdb (2024.10.07-0ubuntu1) over (2024.07.04-0ubuntu1) ... 329s Setting up wireless-regdb (2024.10.07-0ubuntu1) ... 329s Processing triggers for man-db (2.13.0-1) ... 329s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 329s + /usr/lib/apt/apt-helper analyze-pattern ?true 329s + uname -r 329s + sed s/\./\\./g 329s + running_kernel_pattern=^linux-.*6\.12\.0-12-generic.* 329s + apt list ?obsolete 329s + tail -n+2 329s + cut -d/ -f1 329s + grep -v ^linux-.*6\.12\.0-12-generic.* 329s + true 329s + obsolete_pkgs= 329s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove 329s Reading package lists... 329s Building dependency tree... 329s Reading state information... 330s The following packages will be REMOVED: 330s linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 330s linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8* 330s linux-tools-6.11.0-8-generic* 330s 0 upgraded, 0 newly installed, 5 to remove and 0 not upgraded. 330s After this operation, 143 MB disk space will be freed. 330s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80938 files and directories currently installed.) 330s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 330s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 331s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 331s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 331s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 331s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56531 files and directories currently installed.) 331s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 331s + grep -q trusty /etc/lsb-release 331s + [ ! -d /usr/share/doc/unattended-upgrades ] 331s + [ ! -d /usr/share/doc/lxd ] 331s + [ ! -d /usr/share/doc/lxd-client ] 331s + [ ! -d /usr/share/doc/snapd ] 331s + type iptables 331s + cat 331s + chmod 755 /etc/rc.local 331s + . /etc/rc.local 331s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 331s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 331s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 331s + uname -m 331s + [ s390x = ppc64le ] 331s + [ -d /run/systemd/system ] 331s + systemd-detect-virt --quiet --vm 331s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 331s + cat 331s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 331s + echo COMPRESS=lz4 331s autopkgtest: DBG: testbed command exited with code 0 331s autopkgtest [03:28:48]: upgrading testbed (apt dist-upgrade and autopurge) 331s autopkgtest: DBG: testbed command ['/bin/sh', '-ec', '"$@" 3>&2 2>&1', 'run_apt_command', '/usr/bin/eatmydata', 'apt-get', '--quiet', '--assume-yes', '-o=APT::Status-Fd=3', '-o=APT::Install-Recommends=false', '-o=Dpkg::Options::=--force-confnew', '-o=Debug::pkgProblemResolver=true', 'dist-upgrade'], kind install, sout raw, serr pipe, env ['DEBIAN_FRONTEND=noninteractive', 'APT_LISTBUGS_FRONTEND=none', 'APT_LISTCHANGES_FRONTEND=none'] 331s Reading package lists... 331s Building dependency tree... 331s Reading state information... 331s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 332s Starting 2 pkgProblemResolver with broken count: 0 332s Done 332s Entering ResolveByKeep 332s 332s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 332s autopkgtest: DBG: testbed command exited with code 0 332s autopkgtest: DBG: testbed command ['/bin/sh', '-ec', '"$@" 3>&2 2>&1', 'run_apt_command', '/usr/bin/eatmydata', 'apt-get', '--quiet', '--assume-yes', '-o=APT::Status-Fd=3', '-o=APT::Install-Recommends=false', '-o=Dpkg::Options::=--force-confnew', '-o=Debug::pkgProblemResolver=true', '--purge', 'autoremove'], kind install, sout raw, serr pipe, env ['DEBIAN_FRONTEND=noninteractive', 'APT_LISTBUGS_FRONTEND=none', 'APT_LISTCHANGES_FRONTEND=none'] 332s Reading package lists... 332s Building dependency tree... 332s Reading state information... 332s Starting pkgProblemResolver with broken count: 0 333s Starting 2 pkgProblemResolver with broken count: 0 333s Done 333s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 333s autopkgtest: DBG: testbed command exited with code 0 333s autopkgtest: DBG: testbed command ['bash', '-ec', '[ ! -e /run/autopkgtest_no_reboot.stamp ] || exit 0;for d in /boot /boot/efi /boot/grub /etc/init /etc/init.d /etc/systemd/system /lib/systemd/system; do s=/tmp/autopkgtest.ByfMJs/${d//\\//_}.stamp; [ ! -d $d ] || [ `stat -c %Y $d` = `stat -c %Y $s` ]; done'], kind short, sout raw, serr raw, env [] 333s autopkgtest: DBG: testbed command exited with code 1 333s autopkgtest [03:28:50]: rebooting testbed after setup commands that affected boot 333s autopkgtest: DBG: sending command to testbed: reboot 366s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 371s autopkgtest: DBG: got reply from testbed: ok 371s autopkgtest: DBG: testbed supports reboot, creating /tmp/autopkgtest-reboot 371s autopkgtest: DBG: testbed command ['mkdir', '-p', '/tmp/autopkgtest.ByfMJs'], kind short, sout raw, serr pipe, env [] 372s autopkgtest: DBG: testbed command exited with code 0 372s autopkgtest: DBG: sending command to testbed: copydown /home/ubuntu/autopkgtest/lib/in-testbed/reboot.sh /tmp/autopkgtest.ByfMJs/autopkgtest-reboot 372s autopkgtest: DBG: got reply from testbed: ok 372s autopkgtest: DBG: testbed command ['chmod', '-R', '0755', '--', '/tmp/autopkgtest.ByfMJs/autopkgtest-reboot'], kind short, sout raw, serr pipe, env [] 372s autopkgtest: DBG: testbed command exited with code 0 372s autopkgtest: DBG: testbed command ['ln', '-fns', '/tmp/autopkgtest.ByfMJs/autopkgtest-reboot', '/tmp/autopkgtest-reboot'], kind short, sout raw, serr pipe, env [] 373s autopkgtest: DBG: testbed command exited with code 0 373s autopkgtest: DBG: testbed command ['ln', '-fns', '/tmp/autopkgtest.ByfMJs/autopkgtest-reboot', '/sbin/autopkgtest-reboot'], kind short, sout raw, serr pipe, env [] 373s autopkgtest: DBG: testbed command exited with code 0 373s autopkgtest: DBG: testbed command ['mkdir', '-p', '/tmp/autopkgtest.ByfMJs'], kind short, sout raw, serr pipe, env [] 373s autopkgtest: DBG: testbed command exited with code 0 373s autopkgtest: DBG: sending command to testbed: copydown /home/ubuntu/autopkgtest/lib/in-testbed/reboot-prepare.sh /tmp/autopkgtest.ByfMJs/autopkgtest-reboot-prepare 373s autopkgtest: DBG: got reply from testbed: ok 373s autopkgtest: DBG: testbed command ['chmod', '-R', '0755', '--', '/tmp/autopkgtest.ByfMJs/autopkgtest-reboot-prepare'], kind short, sout raw, serr pipe, env [] 374s autopkgtest: DBG: testbed command exited with code 0 374s autopkgtest: DBG: testbed command ['ln', '-fns', '/tmp/autopkgtest.ByfMJs/autopkgtest-reboot-prepare', '/tmp/autopkgtest-reboot-prepare'], kind short, sout raw, serr pipe, env [] 374s autopkgtest: DBG: testbed command exited with code 0 374s autopkgtest: DBG: testbed command ['uname', '-srv'], kind short, sout pipe, serr pipe, env [] 374s autopkgtest: DBG: testbed command exited with code 0 374s autopkgtest [03:29:31]: testbed running kernel: Linux 6.12.0-12-generic #12-Ubuntu SMP Wed Jan 22 15:18:24 UTC 2025 374s autopkgtest: DBG: testbed command ['sh', '-c', 'nproc; cat /proc/cpuinfo 2>/dev/null || true'], kind short, sout pipe, serr pipe, env [] 374s autopkgtest: DBG: testbed command exited with code 0 374s autopkgtest: DBG: testbed command ['sh', '-ec', "dpkg-query --show -f '${Package}\\t${Version}\\n' > /tmp/autopkgtest.ByfMJs/testbed-packages"], kind short, sout raw, serr pipe, env [] 374s autopkgtest: DBG: testbed command exited with code 0 374s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.ByfMJs/testbed-packages /tmp/autopkgtest-work.52nut64i/out/testbed-packages 375s autopkgtest: DBG: got reply from testbed: ok 375s autopkgtest: DBG: testbed supports reboot, creating /tmp/autopkgtest-reboot 375s autopkgtest: DBG: testbed command ['mkdir', '-p', '/tmp/autopkgtest.ByfMJs'], kind short, sout raw, serr pipe, env [] 375s autopkgtest: DBG: testbed command exited with code 0 375s autopkgtest: DBG: sending command to testbed: copydown /home/ubuntu/autopkgtest/lib/in-testbed/reboot.sh /tmp/autopkgtest.ByfMJs/autopkgtest-reboot 376s autopkgtest: DBG: got reply from testbed: ok 376s autopkgtest: DBG: testbed command ['chmod', '-R', '0755', '--', '/tmp/autopkgtest.ByfMJs/autopkgtest-reboot'], kind short, sout raw, serr pipe, env [] 376s autopkgtest: DBG: testbed command exited with code 0 376s autopkgtest: DBG: testbed command ['ln', '-fns', '/tmp/autopkgtest.ByfMJs/autopkgtest-reboot', '/tmp/autopkgtest-reboot'], kind short, sout raw, serr pipe, env [] 376s autopkgtest: DBG: testbed command exited with code 0 376s autopkgtest: DBG: testbed command ['ln', '-fns', '/tmp/autopkgtest.ByfMJs/autopkgtest-reboot', '/sbin/autopkgtest-reboot'], kind short, sout raw, serr pipe, env [] 376s autopkgtest: DBG: testbed command exited with code 0 376s autopkgtest: DBG: testbed command ['mkdir', '-p', '/tmp/autopkgtest.ByfMJs'], kind short, sout raw, serr pipe, env [] 377s autopkgtest: DBG: testbed command exited with code 0 377s autopkgtest: DBG: sending command to testbed: copydown /home/ubuntu/autopkgtest/lib/in-testbed/reboot-prepare.sh /tmp/autopkgtest.ByfMJs/autopkgtest-reboot-prepare 377s autopkgtest: DBG: got reply from testbed: ok 377s autopkgtest: DBG: testbed command ['chmod', '-R', '0755', '--', '/tmp/autopkgtest.ByfMJs/autopkgtest-reboot-prepare'], kind short, sout raw, serr pipe, env [] 377s autopkgtest: DBG: testbed command exited with code 0 377s autopkgtest: DBG: testbed command ['ln', '-fns', '/tmp/autopkgtest.ByfMJs/autopkgtest-reboot-prepare', '/tmp/autopkgtest-reboot-prepare'], kind short, sout raw, serr pipe, env [] 377s autopkgtest: DBG: testbed command exited with code 0 377s autopkgtest: DBG: testbed command ['uname', '-srv'], kind short, sout pipe, serr pipe, env [] 378s autopkgtest: DBG: testbed command exited with code 0 378s autopkgtest: DBG: Binaries: initialising 378s autopkgtest [03:29:35]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-msm 378s autopkgtest: DBG: blame += r-cran-msm 378s autopkgtest: DBG: testbed reset: modified=False, deps_installed=[], deps_new=[] 378s autopkgtest: DBG: testbed command ['apt-cache', 'showsrc', '--only-source', 'r-cran-msm'], kind short, sout pipe, serr pipe, env [] 378s autopkgtest: DBG: testbed command exited with code 0 378s autopkgtest: DBG: testbed command ['apt-cache', 'policy', '^r-cran-msm$'], kind short, sout pipe, serr raw, env [] 379s autopkgtest: DBG: testbed command exited with code 0 379s autopkgtest: DBG: testbed command ['apt-cache', 'show', 'r-cran-msm=1.8-1'], kind short, sout pipe, serr raw, env [] 379s autopkgtest: DBG: testbed command exited with code 0 379s autopkgtest: DBG: install_deps: deps_new=[] 379s autopkgtest: DBG: testbed command ['sh', '-ec', 'command -v dpkg-source'], kind short, sout pipe, serr pipe, env [] 379s autopkgtest: DBG: testbed command exited with code 0 379s autopkgtest: DBG: testbed command ['sh', '-ec', 'su --shell=/bin/sh ubuntu -c \'set -e; exec 3>&1 >&2; set -x; cd /; builddir=$(mktemp -d /tmp/autopkgtest.ByfMJs/build.XXX); cd $builddir; OUT=$(apt-get source -d -q --only-source r-cran-msm=1.8-1 2>&1) || RC=$?;if [ -n "$RC" ]; then if echo "$OUT" | grep -q "Unable to find a source package"; then exit 1; else exit $RC; fi;fi;echo "$OUT" | grep ^Get: || true;dpkg-source -x r-cran-msm_*.dsc src >/dev/null; chmod -R a+rX .; cd [a-z0-9]*/.; pwd >&3; sed -n "1 {s/).*//; s/ (/\\n/; p}" debian/changelog >&3\''], kind build, sout pipe, serr raw, env ['ADT_TEST_TRIGGERS=r-cran-testthat/3.2.3-1'] 379s + cd / 379s + mktemp -d /tmp/autopkgtest.ByfMJs/build.XXX 379s + builddir=/tmp/autopkgtest.ByfMJs/build.uL2 379s + cd /tmp/autopkgtest.ByfMJs/build.uL2 379s + apt-get source -d -q --only-source r-cran-msm=1.8-1 381s + OUT=Reading package lists... 381s NOTICE: 'r-cran-msm' packaging is maintained in the 'Git' version control system at: 381s https://salsa.debian.org/r-pkg-team/r-cran-msm.git 381s Please use: 381s git clone https://salsa.debian.org/r-pkg-team/r-cran-msm.git 381s to retrieve the latest (possibly unreleased) updates to the package. 381s Need to get 1003 kB of source archives. 381s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-msm 1.8-1 (dsc) [2197 B] 381s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-msm 1.8-1 (tar) [996 kB] 381s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-msm 1.8-1 (diff) [4772 B] 381s Fetched 1003 kB in 1s (876 kB/s) 381s Download complete and in download only mode 381s + [ -n ] 381s + grep ^Get: 381s + echo Reading package lists... 381s NOTICE: 'r-cran-msm' packaging is maintained in the 'Git' version control system at: 381s https://salsa.debian.org/r-pkg-team/r-cran-msm.git 381s Please use: 381s git clone https://salsa.debian.org/r-pkg-team/r-cran-msm.git 381s to retrieve the latest (possibly unreleased) updates to the package. 381s Need to get 1003 kB of source archives. 381s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-msm 1.8-1 (dsc) [2197 B] 381s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-msm 1.8-1 (tar) [996 kB] 381s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-msm 1.8-1 (diff) [4772 B] 381s Fetched 1003 kB in 1s (876 kB/s) 381s Download complete and in download only mode 381s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-msm 1.8-1 (dsc) [2197 B] 381s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-msm 1.8-1 (tar) [996 kB] 381s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-msm 1.8-1 (diff) [4772 B] 381s + dpkg-source -x r-cran-msm_1.8-1.dsc src 381s gpgv: Signature made Wed Sep 25 23:42:54 2024 UTC 381s gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 381s gpgv: issuer "plessy@debian.org" 381s gpgv: Can't check signature: No public key 381s dpkg-source: warning: cannot verify inline signature for ./r-cran-msm_1.8-1.dsc: no acceptable signature found 381s + chmod -R a+rX . 381s + cd src/. 381s + pwd 381s + sed -n 1 {s/).*//; s/ (/\n/; p} debian/changelog 381s autopkgtest: DBG: testbed command exited with code 0 381s autopkgtest [03:29:38]: testing package r-cran-msm version 1.8-1 381s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.ByfMJs/build.uL2/src/debian/ /tmp/autopkgtest-work.52nut64i/out/pkg/debian/ 381s autopkgtest: DBG: got reply from testbed: ok 381s autopkgtest: DBG: autodep8 generated control: ----- 381s Tests: run-unit-test 381s Depends: @, 381s r-cran-minqa, 381s r-cran-doparallel, 381s r-cran-foreach, 381s r-cran-numderiv, 381s r-cran-testthat, 381s r-cran-covr 381s Restrictions: allow-stderr 381s 381s 381s Test-Command: /usr/share/dh-r/pkg-r-autopkgtest 381s Depends: @, pkg-r-autopkgtest, 381s Restrictions: allow-stderr, 381s Features: test-name=pkg-r-autopkgtest 381s 381s ------- 382s autopkgtest: DBG: processing dependency @ 382s autopkgtest: DBG: synthesised dependency r-cran-msm 382s autopkgtest: DBG: processing dependency r-cran-minqa 382s autopkgtest: DBG: processing dependency r-cran-doparallel 382s autopkgtest: DBG: processing dependency r-cran-foreach 382s autopkgtest: DBG: processing dependency r-cran-numderiv 382s autopkgtest: DBG: processing dependency r-cran-testthat 382s autopkgtest: DBG: processing dependency r-cran-covr 382s autopkgtest: DBG: Test defined: name run-unit-test path debian/tests/run-unit-test command "None" restrictions ['allow-stderr'] features [] depends ['r-cran-msm', 'r-cran-minqa', 'r-cran-doparallel', 'r-cran-foreach', 'r-cran-numderiv', 'r-cran-testthat', 'r-cran-covr'] 382s autopkgtest: DBG: processing dependency @ 382s autopkgtest: DBG: synthesised dependency r-cran-msm 382s autopkgtest: DBG: processing dependency pkg-r-autopkgtest 382s autopkgtest: DBG: Test defined: name pkg-r-autopkgtest path None command "/usr/share/dh-r/pkg-r-autopkgtest" restrictions ['allow-stderr'] features ['test-name=pkg-r-autopkgtest'] depends ['r-cran-msm', 'pkg-r-autopkgtest'] 382s autopkgtest [03:29:39]: build not needed 382s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.ByfMJs/build.uL2/src/ /tmp/autopkgtest-work.52nut64i/out/tests-tree/ 383s autopkgtest: DBG: got reply from testbed: ok 387s autopkgtest: DBG: autodep8 generated control: ----- 387s Tests: run-unit-test 387s Depends: @, 387s r-cran-minqa, 387s r-cran-doparallel, 387s r-cran-foreach, 387s r-cran-numderiv, 387s r-cran-testthat, 387s r-cran-covr 387s Restrictions: allow-stderr 387s 387s 387s Test-Command: /usr/share/dh-r/pkg-r-autopkgtest 387s Depends: @, r-cran-minqa,r-cran-doparallel,r-cran-foreach,r-cran-numderiv,r-cran-testthat,r-cran-covr, pkg-r-autopkgtest, 387s Restrictions: allow-stderr, 387s Features: test-name=pkg-r-autopkgtest 387s 387s ------- 387s autopkgtest: DBG: processing dependency @ 387s autopkgtest: DBG: synthesised dependency r-cran-msm 387s autopkgtest: DBG: processing dependency r-cran-minqa 387s autopkgtest: DBG: processing dependency r-cran-doparallel 387s autopkgtest: DBG: processing dependency r-cran-foreach 387s autopkgtest: DBG: processing dependency r-cran-numderiv 387s autopkgtest: DBG: processing dependency r-cran-testthat 387s autopkgtest: DBG: processing dependency r-cran-covr 387s autopkgtest: DBG: Test defined: name run-unit-test path debian/tests/run-unit-test command "None" restrictions ['allow-stderr'] features [] depends ['r-cran-msm', 'r-cran-minqa', 'r-cran-doparallel', 'r-cran-foreach', 'r-cran-numderiv', 'r-cran-testthat', 'r-cran-covr'] 387s autopkgtest: DBG: processing dependency @ 387s autopkgtest: DBG: synthesised dependency r-cran-msm 387s autopkgtest: DBG: processing dependency r-cran-minqa 387s autopkgtest: DBG: processing dependency r-cran-doparallel 387s autopkgtest: DBG: processing dependency r-cran-foreach 387s autopkgtest: DBG: processing dependency r-cran-numderiv 387s autopkgtest: DBG: processing dependency r-cran-testthat 387s autopkgtest: DBG: processing dependency r-cran-covr 387s autopkgtest: DBG: processing dependency pkg-r-autopkgtest 387s autopkgtest: DBG: Test defined: name pkg-r-autopkgtest path None command "/usr/share/dh-r/pkg-r-autopkgtest" restrictions ['allow-stderr'] features ['test-name=pkg-r-autopkgtest'] depends ['r-cran-msm', 'r-cran-minqa', 'r-cran-doparallel', 'r-cran-foreach', 'r-cran-numderiv', 'r-cran-testthat', 'r-cran-covr', 'pkg-r-autopkgtest'] 387s autopkgtest [03:29:44]: test run-unit-test: preparing testbed 387s autopkgtest: DBG: testbed reset: modified=False, deps_installed=[], deps_new=['r-cran-msm', 'r-cran-minqa', 'r-cran-doparallel', 'r-cran-foreach', 'r-cran-numderiv', 'r-cran-testthat', 'r-cran-covr'] 387s autopkgtest: DBG: Binaries: no registered binaries, not publishing anything 387s autopkgtest: DBG: install_deps: deps_new=['r-cran-msm', 'r-cran-minqa', 'r-cran-doparallel', 'r-cran-foreach', 'r-cran-numderiv', 'r-cran-testthat', 'r-cran-covr'] 387s autopkgtest: DBG: install-deps: satisfying r-cran-msm, r-cran-minqa, r-cran-doparallel, r-cran-foreach, r-cran-numderiv, r-cran-testthat, r-cran-covr 387s autopkgtest: DBG: can use apt-get on testbed: True 387s autopkgtest: DBG: testbed command ['/bin/sh', '-ec', '"$@" 3>&2 2>&1', 'run_apt_command', '/usr/bin/eatmydata', 'apt-get', '--quiet', '--assume-yes', '-o=APT::Status-Fd=3', '-o=APT::Install-Recommends=false', '-o=Dpkg::Options::=--force-confnew', '-o=Debug::pkgProblemResolver=true', 'satisfy', 'r-cran-msm, r-cran-minqa, r-cran-doparallel, r-cran-foreach, r-cran-numderiv, r-cran-testthat, r-cran-covr'], kind install, sout raw, serr pipe, env ['DEBIAN_FRONTEND=noninteractive', 'APT_LISTBUGS_FRONTEND=none', 'APT_LISTCHANGES_FRONTEND=none'] 387s Reading package lists... 388s Building dependency tree... 388s Reading state information... 388s Starting pkgProblemResolver with broken count: 0 388s Starting 2 pkgProblemResolver with broken count: 0 388s Done 388s The following NEW packages will be installed: 388s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 388s fonts-glyphicons-halflings libblas3 libcairo2 libdatrie1 libdeflate0 388s libfontconfig1 libfreetype6 libgfortran5 libgomp1 libgraphite2-3 388s libharfbuzz0b libice6 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap 388s liblapack3 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 388s libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6 388s libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0 388s libxft2 libxrender1 libxss1 libxt6t64 littler node-html5shiv r-base-core 388s r-cran-askpass r-cran-brio r-cran-callr r-cran-cli r-cran-codetools 388s r-cran-covr r-cran-crayon r-cran-curl r-cran-desc r-cran-diffobj 388s r-cran-digest r-cran-doparallel r-cran-evaluate r-cran-expm r-cran-fansi 388s r-cran-foreach r-cran-fs r-cran-generics r-cran-glue r-cran-httr 388s r-cran-iterators r-cran-jsonlite r-cran-lattice r-cran-lazyeval 388s r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-matrix r-cran-mime 388s r-cran-minqa r-cran-msm r-cran-mvtnorm r-cran-numderiv r-cran-openssl 388s r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten 388s r-cran-pkgload r-cran-praise r-cran-processx r-cran-ps r-cran-r6 r-cran-rcpp 388s r-cran-rex r-cran-rlang r-cran-rprojroot r-cran-survival r-cran-sys 388s r-cran-testthat r-cran-tibble r-cran-utf8 r-cran-vctrs r-cran-waldo 388s r-cran-withr r-cran-yaml unzip x11-common xdg-utils zip 388s 0 upgraded, 104 newly installed, 0 to remove and 0 not upgraded. 388s Need to get 75.3 MB of archives. 388s After this operation, 143 MB of additional disk space will be used. 388s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB] 389s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 389s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 390s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-1.1ubuntu2 [37.4 kB] 390s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-1.1ubuntu2 [150 kB] 390s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig s390x 2.15.0-1.1ubuntu2 [191 kB] 390s Get:7 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 390s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.0-4 [238 kB] 390s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB] 390s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB] 390s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B] 390s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB] 390s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB] 390s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB] 390s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.23-1 [46.1 kB] 390s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 14.2.0-13ubuntu1 [588 kB] 390s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 14.2.0-13ubuntu1 [151 kB] 390s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB] 390s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB] 391s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB] 391s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB] 391s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB] 391s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 391s Get:24 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 391s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.0-4 [2964 kB] 391s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x libthai-data all 0.1.29-2build1 [158 kB] 391s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB] 391s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x libpango-1.0-0 s390x 1.56.1-1 [253 kB] 391s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x libpangoft2-1.0-0 s390x 1.56.1-1 [50.3 kB] 391s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libpangocairo-1.0-0 s390x 1.56.1-1 [28.3 kB] 391s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB] 391s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB] 391s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB] 391s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libsm6 s390x 2:1.2.4-1 [18.4 kB] 391s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB] 391s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB] 391s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB] 391s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB] 391s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB] 391s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B] 391s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.16-1 [830 kB] 392s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB] 392s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x zip s390x 3.0-14ubuntu2 [187 kB] 392s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x unzip s390x 6.0-28ubuntu6 [186 kB] 392s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 392s Get:46 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-core s390x 4.4.2-1build1 [28.6 MB] 393s Get:47 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-littler s390x 0.3.20-2 [95.0 kB] 393s Get:48 http://ftpmaster.internal/ubuntu plucky/universe s390x littler all 0.3.20-2 [2554 B] 393s Get:49 http://ftpmaster.internal/ubuntu plucky/universe s390x node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 393s Get:50 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sys s390x 3.4.3-1 [45.2 kB] 393s Get:51 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-askpass s390x 1.2.1-1 [24.8 kB] 393s Get:52 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-brio s390x 1.1.5-1 [38.6 kB] 393s Get:53 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ps s390x 1.8.1-1 [395 kB] 393s Get:54 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r6 all 2.5.1-1 [99.0 kB] 393s Get:55 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-processx s390x 3.8.5-1 [354 kB] 393s Get:56 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-callr all 3.7.6-1 [458 kB] 393s Get:57 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cli s390x 3.6.3-1 [1349 kB] 393s Get:58 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-codetools all 0.2-20-1 [90.5 kB] 393s Get:59 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-digest s390x 0.6.37-1 [205 kB] 393s Get:60 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-jsonlite s390x 1.8.9+dfsg-1 [447 kB] 393s Get:61 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lazyeval s390x 0.2.2-1build1 [143 kB] 393s Get:62 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rex all 1.2.1-1 [129 kB] 393s Get:63 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-curl s390x 6.1.0+dfsg-1 [195 kB] 393s Get:64 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mime s390x 0.12-2 [35.8 kB] 393s Get:65 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-openssl s390x 2.2.0+dfsg-1 [405 kB] 393s Get:66 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-httr all 1.4.7+dfsg-1 [459 kB] 394s Get:67 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-crayon all 1.5.3-1 [165 kB] 394s Get:68 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-withr all 3.0.2+dfsg-1 [214 kB] 394s Get:69 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-yaml s390x 2.3.10-1 [113 kB] 394s Get:70 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-covr s390x 3.6.4+dfsg-1 [302 kB] 394s Get:71 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-desc all 1.4.3-1 [359 kB] 394s Get:72 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-diffobj s390x 0.3.5-1 [1115 kB] 394s Get:73 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-iterators all 1.0.14-1 [336 kB] 394s Get:74 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-foreach all 1.5.2-1 [124 kB] 394s Get:75 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-doparallel all 1.0.17-1 [189 kB] 394s Get:76 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-evaluate all 1.0.3-1 [114 kB] 394s Get:77 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lattice s390x 0.22-6-1 [1340 kB] 394s Get:78 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-matrix s390x 1.7-2-1 [4441 kB] 394s Get:79 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-expm s390x 1.0-0-1 [229 kB] 394s Get:80 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fansi s390x 1.0.5-1 [615 kB] 394s Get:81 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fs s390x 1.6.5+dfsg-1 [245 kB] 394s Get:82 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-generics all 0.1.3-1 [81.3 kB] 394s Get:83 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-glue s390x 1.8.0-1 [164 kB] 394s Get:84 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rlang s390x 1.1.5-1 [1713 kB] 394s Get:85 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 394s Get:86 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB] 394s Get:87 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 394s Get:88 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcpp s390x 1.0.14-1 [2003 kB] 394s Get:89 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-minqa s390x 1.2.8-1 [139 kB] 394s Get:90 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-survival s390x 3.8-3-1 [8250 kB] 394s Get:91 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mvtnorm s390x 1.3-3-1 [924 kB] 394s Get:92 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB] 394s Get:93 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB] 394s Get:94 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 394s Get:95 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 394s Get:96 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tibble s390x 3.2.1+dfsg-3 [420 kB] 394s Get:97 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-msm s390x 1.8-1 [1563 kB] 394s Get:98 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-numderiv all 2016.8-1.1-3 [115 kB] 394s Get:99 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgbuild all 1.4.6-1 [213 kB] 394s Get:100 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rprojroot all 2.0.4-2 [125 kB] 394s Get:101 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgload all 1.4.0-1 [247 kB] 395s Get:102 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-praise all 1.0.0-4build1 [20.3 kB] 395s Get:103 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-waldo all 0.6.1-1 [150 kB] 395s Get:104 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x r-cran-testthat s390x 3.2.3-1 [1641 kB] 395s Preconfiguring packages ... 395s Fetched 75.3 MB in 7s (10.6 MB/s) 395s Selecting previously unselected package libfreetype6:s390x. 396s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56531 files and directories currently installed.) 396s Preparing to unpack .../000-libfreetype6_2.13.3+dfsg-1_s390x.deb ... 396s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ... 396s Selecting previously unselected package fonts-dejavu-mono. 396s Preparing to unpack .../001-fonts-dejavu-mono_2.37-8_all.deb ... 396s Unpacking fonts-dejavu-mono (2.37-8) ... 396s Selecting previously unselected package fonts-dejavu-core. 396s Preparing to unpack .../002-fonts-dejavu-core_2.37-8_all.deb ... 396s Unpacking fonts-dejavu-core (2.37-8) ... 396s Selecting previously unselected package fontconfig-config. 396s Preparing to unpack .../003-fontconfig-config_2.15.0-1.1ubuntu2_s390x.deb ... 396s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 396s Selecting previously unselected package libfontconfig1:s390x. 396s Preparing to unpack .../004-libfontconfig1_2.15.0-1.1ubuntu2_s390x.deb ... 396s Unpacking libfontconfig1:s390x (2.15.0-1.1ubuntu2) ... 396s Selecting previously unselected package fontconfig. 396s Preparing to unpack .../005-fontconfig_2.15.0-1.1ubuntu2_s390x.deb ... 396s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 396s Selecting previously unselected package fonts-glyphicons-halflings. 396s Preparing to unpack .../006-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 396s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 396s Selecting previously unselected package libblas3:s390x. 396s Preparing to unpack .../007-libblas3_3.12.0-4_s390x.deb ... 396s Unpacking libblas3:s390x (3.12.0-4) ... 396s Selecting previously unselected package libpixman-1-0:s390x. 396s Preparing to unpack .../008-libpixman-1-0_0.44.0-3_s390x.deb ... 396s Unpacking libpixman-1-0:s390x (0.44.0-3) ... 396s Selecting previously unselected package libxcb-render0:s390x. 396s Preparing to unpack .../009-libxcb-render0_1.17.0-2_s390x.deb ... 396s Unpacking libxcb-render0:s390x (1.17.0-2) ... 396s Selecting previously unselected package libxcb-shm0:s390x. 396s Preparing to unpack .../010-libxcb-shm0_1.17.0-2_s390x.deb ... 396s Unpacking libxcb-shm0:s390x (1.17.0-2) ... 396s Selecting previously unselected package libxrender1:s390x. 396s Preparing to unpack .../011-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ... 396s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ... 396s Selecting previously unselected package libcairo2:s390x. 396s Preparing to unpack .../012-libcairo2_1.18.2-2_s390x.deb ... 396s Unpacking libcairo2:s390x (1.18.2-2) ... 396s Selecting previously unselected package libdatrie1:s390x. 396s Preparing to unpack .../013-libdatrie1_0.2.13-3build1_s390x.deb ... 396s Unpacking libdatrie1:s390x (0.2.13-3build1) ... 396s Selecting previously unselected package libdeflate0:s390x. 396s Preparing to unpack .../014-libdeflate0_1.23-1_s390x.deb ... 396s Unpacking libdeflate0:s390x (1.23-1) ... 396s Selecting previously unselected package libgfortran5:s390x. 396s Preparing to unpack .../015-libgfortran5_14.2.0-13ubuntu1_s390x.deb ... 396s Unpacking libgfortran5:s390x (14.2.0-13ubuntu1) ... 396s Selecting previously unselected package libgomp1:s390x. 396s Preparing to unpack .../016-libgomp1_14.2.0-13ubuntu1_s390x.deb ... 396s Unpacking libgomp1:s390x (14.2.0-13ubuntu1) ... 396s Selecting previously unselected package libgraphite2-3:s390x. 396s Preparing to unpack .../017-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ... 396s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 396s Selecting previously unselected package libharfbuzz0b:s390x. 396s Preparing to unpack .../018-libharfbuzz0b_10.2.0-1_s390x.deb ... 396s Unpacking libharfbuzz0b:s390x (10.2.0-1) ... 396s Selecting previously unselected package x11-common. 396s Preparing to unpack .../019-x11-common_1%3a7.7+23ubuntu3_all.deb ... 396s Unpacking x11-common (1:7.7+23ubuntu3) ... 396s Selecting previously unselected package libice6:s390x. 396s Preparing to unpack .../020-libice6_2%3a1.1.1-1_s390x.deb ... 396s Unpacking libice6:s390x (2:1.1.1-1) ... 396s Selecting previously unselected package libjpeg-turbo8:s390x. 396s Preparing to unpack .../021-libjpeg-turbo8_2.1.5-3ubuntu2_s390x.deb ... 396s Unpacking libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ... 396s Selecting previously unselected package libjpeg8:s390x. 396s Preparing to unpack .../022-libjpeg8_8c-2ubuntu11_s390x.deb ... 396s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 396s Selecting previously unselected package libjs-bootstrap. 396s Preparing to unpack .../023-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 396s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 396s Selecting previously unselected package liblapack3:s390x. 396s Preparing to unpack .../024-liblapack3_3.12.0-4_s390x.deb ... 396s Unpacking liblapack3:s390x (3.12.0-4) ... 396s Selecting previously unselected package libthai-data. 396s Preparing to unpack .../025-libthai-data_0.1.29-2build1_all.deb ... 396s Unpacking libthai-data (0.1.29-2build1) ... 396s Selecting previously unselected package libthai0:s390x. 396s Preparing to unpack .../026-libthai0_0.1.29-2build1_s390x.deb ... 396s Unpacking libthai0:s390x (0.1.29-2build1) ... 396s Selecting previously unselected package libpango-1.0-0:s390x. 396s Preparing to unpack .../027-libpango-1.0-0_1.56.1-1_s390x.deb ... 396s Unpacking libpango-1.0-0:s390x (1.56.1-1) ... 396s Selecting previously unselected package libpangoft2-1.0-0:s390x. 396s Preparing to unpack .../028-libpangoft2-1.0-0_1.56.1-1_s390x.deb ... 396s Unpacking libpangoft2-1.0-0:s390x (1.56.1-1) ... 396s Selecting previously unselected package libpangocairo-1.0-0:s390x. 396s Preparing to unpack .../029-libpangocairo-1.0-0_1.56.1-1_s390x.deb ... 396s Unpacking libpangocairo-1.0-0:s390x (1.56.1-1) ... 396s Selecting previously unselected package libpaper2:s390x. 396s Preparing to unpack .../030-libpaper2_2.2.5-0.3_s390x.deb ... 396s Unpacking libpaper2:s390x (2.2.5-0.3) ... 396s Selecting previously unselected package libpaper-utils. 396s Preparing to unpack .../031-libpaper-utils_2.2.5-0.3_s390x.deb ... 396s Unpacking libpaper-utils (2.2.5-0.3) ... 396s Selecting previously unselected package libsharpyuv0:s390x. 396s Preparing to unpack .../032-libsharpyuv0_1.5.0-0.1_s390x.deb ... 396s Unpacking libsharpyuv0:s390x (1.5.0-0.1) ... 396s Selecting previously unselected package libsm6:s390x. 396s Preparing to unpack .../033-libsm6_2%3a1.2.4-1_s390x.deb ... 396s Unpacking libsm6:s390x (2:1.2.4-1) ... 396s Selecting previously unselected package libtcl8.6:s390x. 396s Preparing to unpack .../034-libtcl8.6_8.6.16+dfsg-1_s390x.deb ... 396s Unpacking libtcl8.6:s390x (8.6.16+dfsg-1) ... 396s Selecting previously unselected package libjbig0:s390x. 396s Preparing to unpack .../035-libjbig0_2.1-6.1ubuntu2_s390x.deb ... 396s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ... 396s Selecting previously unselected package libwebp7:s390x. 396s Preparing to unpack .../036-libwebp7_1.5.0-0.1_s390x.deb ... 396s Unpacking libwebp7:s390x (1.5.0-0.1) ... 396s Selecting previously unselected package libtiff6:s390x. 396s Preparing to unpack .../037-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ... 396s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 396s Selecting previously unselected package libxft2:s390x. 396s Preparing to unpack .../038-libxft2_2.3.6-1build1_s390x.deb ... 396s Unpacking libxft2:s390x (2.3.6-1build1) ... 396s Selecting previously unselected package libxss1:s390x. 396s Preparing to unpack .../039-libxss1_1%3a1.2.3-1build3_s390x.deb ... 396s Unpacking libxss1:s390x (1:1.2.3-1build3) ... 396s Selecting previously unselected package libtk8.6:s390x. 396s Preparing to unpack .../040-libtk8.6_8.6.16-1_s390x.deb ... 396s Unpacking libtk8.6:s390x (8.6.16-1) ... 396s Selecting previously unselected package libxt6t64:s390x. 396s Preparing to unpack .../041-libxt6t64_1%3a1.2.1-1.2build1_s390x.deb ... 396s Unpacking libxt6t64:s390x (1:1.2.1-1.2build1) ... 396s Selecting previously unselected package zip. 396s Preparing to unpack .../042-zip_3.0-14ubuntu2_s390x.deb ... 396s Unpacking zip (3.0-14ubuntu2) ... 396s Selecting previously unselected package unzip. 396s Preparing to unpack .../043-unzip_6.0-28ubuntu6_s390x.deb ... 396s Unpacking unzip (6.0-28ubuntu6) ... 396s Selecting previously unselected package xdg-utils. 396s Preparing to unpack .../044-xdg-utils_1.2.1-0ubuntu1_all.deb ... 396s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 396s Selecting previously unselected package r-base-core. 396s Preparing to unpack .../045-r-base-core_4.4.2-1build1_s390x.deb ... 396s Unpacking r-base-core (4.4.2-1build1) ... 396s Selecting previously unselected package r-cran-littler. 396s Preparing to unpack .../046-r-cran-littler_0.3.20-2_s390x.deb ... 396s Unpacking r-cran-littler (0.3.20-2) ... 396s Selecting previously unselected package littler. 396s Preparing to unpack .../047-littler_0.3.20-2_all.deb ... 396s Unpacking littler (0.3.20-2) ... 397s Selecting previously unselected package node-html5shiv. 397s Preparing to unpack .../048-node-html5shiv_3.7.3+dfsg-5_all.deb ... 397s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 397s Selecting previously unselected package r-cran-sys. 397s Preparing to unpack .../049-r-cran-sys_3.4.3-1_s390x.deb ... 397s Unpacking r-cran-sys (3.4.3-1) ... 397s Selecting previously unselected package r-cran-askpass. 397s Preparing to unpack .../050-r-cran-askpass_1.2.1-1_s390x.deb ... 397s Unpacking r-cran-askpass (1.2.1-1) ... 397s Selecting previously unselected package r-cran-brio. 397s Preparing to unpack .../051-r-cran-brio_1.1.5-1_s390x.deb ... 397s Unpacking r-cran-brio (1.1.5-1) ... 397s Selecting previously unselected package r-cran-ps. 397s Preparing to unpack .../052-r-cran-ps_1.8.1-1_s390x.deb ... 397s Unpacking r-cran-ps (1.8.1-1) ... 397s Selecting previously unselected package r-cran-r6. 397s Preparing to unpack .../053-r-cran-r6_2.5.1-1_all.deb ... 397s Unpacking r-cran-r6 (2.5.1-1) ... 397s Selecting previously unselected package r-cran-processx. 397s Preparing to unpack .../054-r-cran-processx_3.8.5-1_s390x.deb ... 397s Unpacking r-cran-processx (3.8.5-1) ... 397s Selecting previously unselected package r-cran-callr. 397s Preparing to unpack .../055-r-cran-callr_3.7.6-1_all.deb ... 397s Unpacking r-cran-callr (3.7.6-1) ... 397s Selecting previously unselected package r-cran-cli. 397s Preparing to unpack .../056-r-cran-cli_3.6.3-1_s390x.deb ... 397s Unpacking r-cran-cli (3.6.3-1) ... 397s Selecting previously unselected package r-cran-codetools. 397s Preparing to unpack .../057-r-cran-codetools_0.2-20-1_all.deb ... 397s Unpacking r-cran-codetools (0.2-20-1) ... 397s Selecting previously unselected package r-cran-digest. 397s Preparing to unpack .../058-r-cran-digest_0.6.37-1_s390x.deb ... 397s Unpacking r-cran-digest (0.6.37-1) ... 397s Selecting previously unselected package r-cran-jsonlite. 397s Preparing to unpack .../059-r-cran-jsonlite_1.8.9+dfsg-1_s390x.deb ... 397s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ... 397s Selecting previously unselected package r-cran-lazyeval. 397s Preparing to unpack .../060-r-cran-lazyeval_0.2.2-1build1_s390x.deb ... 397s Unpacking r-cran-lazyeval (0.2.2-1build1) ... 397s Selecting previously unselected package r-cran-rex. 397s Preparing to unpack .../061-r-cran-rex_1.2.1-1_all.deb ... 397s Unpacking r-cran-rex (1.2.1-1) ... 397s Selecting previously unselected package r-cran-curl. 397s Preparing to unpack .../062-r-cran-curl_6.1.0+dfsg-1_s390x.deb ... 397s Unpacking r-cran-curl (6.1.0+dfsg-1) ... 397s Selecting previously unselected package r-cran-mime. 397s Preparing to unpack .../063-r-cran-mime_0.12-2_s390x.deb ... 397s Unpacking r-cran-mime (0.12-2) ... 397s Selecting previously unselected package r-cran-openssl. 397s Preparing to unpack .../064-r-cran-openssl_2.2.0+dfsg-1_s390x.deb ... 397s Unpacking r-cran-openssl (2.2.0+dfsg-1) ... 397s Selecting previously unselected package r-cran-httr. 397s Preparing to unpack .../065-r-cran-httr_1.4.7+dfsg-1_all.deb ... 397s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 397s Selecting previously unselected package r-cran-crayon. 397s Preparing to unpack .../066-r-cran-crayon_1.5.3-1_all.deb ... 397s Unpacking r-cran-crayon (1.5.3-1) ... 397s Selecting previously unselected package r-cran-withr. 397s Preparing to unpack .../067-r-cran-withr_3.0.2+dfsg-1_all.deb ... 397s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 397s Selecting previously unselected package r-cran-yaml. 397s Preparing to unpack .../068-r-cran-yaml_2.3.10-1_s390x.deb ... 397s Unpacking r-cran-yaml (2.3.10-1) ... 397s Selecting previously unselected package r-cran-covr. 397s Preparing to unpack .../069-r-cran-covr_3.6.4+dfsg-1_s390x.deb ... 397s Unpacking r-cran-covr (3.6.4+dfsg-1) ... 397s Selecting previously unselected package r-cran-desc. 397s Preparing to unpack .../070-r-cran-desc_1.4.3-1_all.deb ... 397s Unpacking r-cran-desc (1.4.3-1) ... 397s Selecting previously unselected package r-cran-diffobj. 397s Preparing to unpack .../071-r-cran-diffobj_0.3.5-1_s390x.deb ... 397s Unpacking r-cran-diffobj (0.3.5-1) ... 397s Selecting previously unselected package r-cran-iterators. 397s Preparing to unpack .../072-r-cran-iterators_1.0.14-1_all.deb ... 397s Unpacking r-cran-iterators (1.0.14-1) ... 397s Selecting previously unselected package r-cran-foreach. 397s Preparing to unpack .../073-r-cran-foreach_1.5.2-1_all.deb ... 397s Unpacking r-cran-foreach (1.5.2-1) ... 397s Selecting previously unselected package r-cran-doparallel. 397s Preparing to unpack .../074-r-cran-doparallel_1.0.17-1_all.deb ... 397s Unpacking r-cran-doparallel (1.0.17-1) ... 397s Selecting previously unselected package r-cran-evaluate. 397s Preparing to unpack .../075-r-cran-evaluate_1.0.3-1_all.deb ... 397s Unpacking r-cran-evaluate (1.0.3-1) ... 397s Selecting previously unselected package r-cran-lattice. 397s Preparing to unpack .../076-r-cran-lattice_0.22-6-1_s390x.deb ... 397s Unpacking r-cran-lattice (0.22-6-1) ... 397s Selecting previously unselected package r-cran-matrix. 397s Preparing to unpack .../077-r-cran-matrix_1.7-2-1_s390x.deb ... 397s Unpacking r-cran-matrix (1.7-2-1) ... 397s Selecting previously unselected package r-cran-expm. 397s Preparing to unpack .../078-r-cran-expm_1.0-0-1_s390x.deb ... 397s Unpacking r-cran-expm (1.0-0-1) ... 397s Selecting previously unselected package r-cran-fansi. 397s Preparing to unpack .../079-r-cran-fansi_1.0.5-1_s390x.deb ... 397s Unpacking r-cran-fansi (1.0.5-1) ... 397s Selecting previously unselected package r-cran-fs. 397s Preparing to unpack .../080-r-cran-fs_1.6.5+dfsg-1_s390x.deb ... 397s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 397s Selecting previously unselected package r-cran-generics. 397s Preparing to unpack .../081-r-cran-generics_0.1.3-1_all.deb ... 397s Unpacking r-cran-generics (0.1.3-1) ... 397s Selecting previously unselected package r-cran-glue. 397s Preparing to unpack .../082-r-cran-glue_1.8.0-1_s390x.deb ... 397s Unpacking r-cran-glue (1.8.0-1) ... 397s Selecting previously unselected package r-cran-rlang. 397s Preparing to unpack .../083-r-cran-rlang_1.1.5-1_s390x.deb ... 397s Unpacking r-cran-rlang (1.1.5-1) ... 397s Selecting previously unselected package r-cran-lifecycle. 397s Preparing to unpack .../084-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 397s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 397s Selecting previously unselected package r-cran-magrittr. 397s Preparing to unpack .../085-r-cran-magrittr_2.0.3-1_s390x.deb ... 397s Unpacking r-cran-magrittr (2.0.3-1) ... 397s Selecting previously unselected package r-cran-pkgkitten. 397s Preparing to unpack .../086-r-cran-pkgkitten_0.2.4-1_all.deb ... 397s Unpacking r-cran-pkgkitten (0.2.4-1) ... 397s Selecting previously unselected package r-cran-rcpp. 397s Preparing to unpack .../087-r-cran-rcpp_1.0.14-1_s390x.deb ... 397s Unpacking r-cran-rcpp (1.0.14-1) ... 397s Selecting previously unselected package r-cran-minqa. 397s Preparing to unpack .../088-r-cran-minqa_1.2.8-1_s390x.deb ... 397s Unpacking r-cran-minqa (1.2.8-1) ... 397s Selecting previously unselected package r-cran-survival. 397s Preparing to unpack .../089-r-cran-survival_3.8-3-1_s390x.deb ... 397s Unpacking r-cran-survival (3.8-3-1) ... 397s Selecting previously unselected package r-cran-mvtnorm. 397s Preparing to unpack .../090-r-cran-mvtnorm_1.3-3-1_s390x.deb ... 397s Unpacking r-cran-mvtnorm (1.3-3-1) ... 397s Selecting previously unselected package r-cran-utf8. 397s Preparing to unpack .../091-r-cran-utf8_1.2.4-1_s390x.deb ... 397s Unpacking r-cran-utf8 (1.2.4-1) ... 397s Selecting previously unselected package r-cran-vctrs. 397s Preparing to unpack .../092-r-cran-vctrs_0.6.5-1_s390x.deb ... 397s Unpacking r-cran-vctrs (0.6.5-1) ... 397s Selecting previously unselected package r-cran-pillar. 397s Preparing to unpack .../093-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 397s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 397s Selecting previously unselected package r-cran-pkgconfig. 397s Preparing to unpack .../094-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 397s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 397s Selecting previously unselected package r-cran-tibble. 397s Preparing to unpack .../095-r-cran-tibble_3.2.1+dfsg-3_s390x.deb ... 397s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 397s Selecting previously unselected package r-cran-msm. 397s Preparing to unpack .../096-r-cran-msm_1.8-1_s390x.deb ... 397s Unpacking r-cran-msm (1.8-1) ... 397s Selecting previously unselected package r-cran-numderiv. 397s Preparing to unpack .../097-r-cran-numderiv_2016.8-1.1-3_all.deb ... 397s Unpacking r-cran-numderiv (2016.8-1.1-3) ... 397s Selecting previously unselected package r-cran-pkgbuild. 397s Preparing to unpack .../098-r-cran-pkgbuild_1.4.6-1_all.deb ... 397s Unpacking r-cran-pkgbuild (1.4.6-1) ... 397s Selecting previously unselected package r-cran-rprojroot. 397s Preparing to unpack .../099-r-cran-rprojroot_2.0.4-2_all.deb ... 397s Unpacking r-cran-rprojroot (2.0.4-2) ... 397s Selecting previously unselected package r-cran-pkgload. 397s Preparing to unpack .../100-r-cran-pkgload_1.4.0-1_all.deb ... 397s Unpacking r-cran-pkgload (1.4.0-1) ... 397s Selecting previously unselected package r-cran-praise. 397s Preparing to unpack .../101-r-cran-praise_1.0.0-4build1_all.deb ... 397s Unpacking r-cran-praise (1.0.0-4build1) ... 397s Selecting previously unselected package r-cran-waldo. 397s Preparing to unpack .../102-r-cran-waldo_0.6.1-1_all.deb ... 397s Unpacking r-cran-waldo (0.6.1-1) ... 397s Selecting previously unselected package r-cran-testthat. 397s Preparing to unpack .../103-r-cran-testthat_3.2.3-1_s390x.deb ... 397s Unpacking r-cran-testthat (3.2.3-1) ... 397s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 397s Setting up libpixman-1-0:s390x (0.44.0-3) ... 397s Setting up libsharpyuv0:s390x (1.5.0-0.1) ... 397s Setting up libxrender1:s390x (1:0.9.10-1.1build1) ... 397s Setting up libdatrie1:s390x (0.2.13-3build1) ... 397s Setting up libxcb-render0:s390x (1.17.0-2) ... 397s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 397s Setting up unzip (6.0-28ubuntu6) ... 397s Setting up x11-common (1:7.7+23ubuntu3) ... 398s Setting up node-html5shiv (3.7.3+dfsg-5) ... 398s Setting up libdeflate0:s390x (1.23-1) ... 398s Setting up libxcb-shm0:s390x (1.17.0-2) ... 398s Setting up libgomp1:s390x (14.2.0-13ubuntu1) ... 398s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ... 398s Setting up zip (3.0-14ubuntu2) ... 398s Setting up libblas3:s390x (3.12.0-4) ... 398s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 398s Setting up libfreetype6:s390x (2.13.3+dfsg-1) ... 398s Setting up fonts-dejavu-mono (2.37-8) ... 398s Setting up libtcl8.6:s390x (8.6.16+dfsg-1) ... 398s Setting up fonts-dejavu-core (2.37-8) ... 398s Setting up libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ... 398s Setting up libgfortran5:s390x (14.2.0-13ubuntu1) ... 398s Setting up libwebp7:s390x (1.5.0-0.1) ... 398s Setting up libharfbuzz0b:s390x (10.2.0-1) ... 398s Setting up libthai-data (0.1.29-2build1) ... 398s Setting up libxss1:s390x (1:1.2.3-1build3) ... 398s Setting up libpaper2:s390x (2.2.5-0.3) ... 398s Setting up xdg-utils (1.2.1-0ubuntu1) ... 398s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 398s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 398s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 398s Setting up libice6:s390x (2:1.1.1-1) ... 398s Setting up liblapack3:s390x (3.12.0-4) ... 398s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 398s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 398s Setting up libpaper-utils (2.2.5-0.3) ... 398s Setting up libthai0:s390x (0.1.29-2build1) ... 398s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 398s Setting up libfontconfig1:s390x (2.15.0-1.1ubuntu2) ... 398s Setting up libsm6:s390x (2:1.2.4-1) ... 398s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 400s Regenerating fonts cache... done. 400s Setting up libxft2:s390x (2.3.6-1build1) ... 400s Setting up libtk8.6:s390x (8.6.16-1) ... 400s Setting up libpango-1.0-0:s390x (1.56.1-1) ... 400s Setting up libcairo2:s390x (1.18.2-2) ... 400s Setting up libxt6t64:s390x (1:1.2.1-1.2build1) ... 400s Setting up libpangoft2-1.0-0:s390x (1.56.1-1) ... 400s Setting up libpangocairo-1.0-0:s390x (1.56.1-1) ... 400s Setting up r-base-core (4.4.2-1build1) ... 400s Creating config file /etc/R/Renviron with new version 400s Setting up r-cran-crayon (1.5.3-1) ... 400s Setting up r-cran-lattice (0.22-6-1) ... 400s Setting up r-cran-ps (1.8.1-1) ... 400s Setting up r-cran-lazyeval (0.2.2-1build1) ... 400s Setting up r-cran-r6 (2.5.1-1) ... 400s Setting up r-cran-pkgkitten (0.2.4-1) ... 400s Setting up r-cran-numderiv (2016.8-1.1-3) ... 400s Setting up r-cran-magrittr (2.0.3-1) ... 400s Setting up r-cran-littler (0.3.20-2) ... 400s Setting up r-cran-fs (1.6.5+dfsg-1) ... 400s Setting up r-cran-rcpp (1.0.14-1) ... 400s Setting up r-cran-curl (6.1.0+dfsg-1) ... 400s Setting up r-cran-codetools (0.2-20-1) ... 400s Setting up r-cran-brio (1.1.5-1) ... 400s Setting up r-cran-diffobj (0.3.5-1) ... 400s Setting up r-cran-rlang (1.1.5-1) ... 400s Setting up littler (0.3.20-2) ... 400s Setting up r-cran-sys (3.4.3-1) ... 400s Setting up r-cran-withr (3.0.2+dfsg-1) ... 400s Setting up r-cran-processx (3.8.5-1) ... 400s Setting up r-cran-mime (0.12-2) ... 400s Setting up r-cran-praise (1.0.0-4build1) ... 400s Setting up r-cran-generics (0.1.3-1) ... 400s Setting up r-cran-iterators (1.0.14-1) ... 400s Setting up r-cran-digest (0.6.37-1) ... 400s Setting up r-cran-yaml (2.3.10-1) ... 400s Setting up r-cran-evaluate (1.0.3-1) ... 400s Setting up r-cran-foreach (1.5.2-1) ... 400s Setting up r-cran-fansi (1.0.5-1) ... 400s Setting up r-cran-glue (1.8.0-1) ... 400s Setting up r-cran-cli (3.6.3-1) ... 400s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 400s Setting up r-cran-rprojroot (2.0.4-2) ... 400s Setting up r-cran-askpass (1.2.1-1) ... 400s Setting up r-cran-jsonlite (1.8.9+dfsg-1) ... 400s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 400s Setting up r-cran-utf8 (1.2.4-1) ... 400s Setting up r-cran-rex (1.2.1-1) ... 400s Setting up r-cran-mvtnorm (1.3-3-1) ... 400s Setting up r-cran-waldo (0.6.1-1) ... 400s Setting up r-cran-matrix (1.7-2-1) ... 400s Setting up r-cran-doparallel (1.0.17-1) ... 400s Setting up r-cran-vctrs (0.6.5-1) ... 400s Setting up r-cran-pillar (1.10.1+dfsg-1) ... 400s Setting up r-cran-minqa (1.2.8-1) ... 400s Setting up r-cran-openssl (2.2.0+dfsg-1) ... 400s Setting up r-cran-callr (3.7.6-1) ... 400s Setting up r-cran-desc (1.4.3-1) ... 400s Setting up r-cran-tibble (3.2.1+dfsg-3) ... 400s Setting up r-cran-survival (3.8-3-1) ... 400s Setting up r-cran-expm (1.0-0-1) ... 400s Setting up r-cran-httr (1.4.7+dfsg-1) ... 400s Setting up r-cran-covr (3.6.4+dfsg-1) ... 400s Setting up r-cran-pkgbuild (1.4.6-1) ... 400s Setting up r-cran-pkgload (1.4.0-1) ... 400s Setting up r-cran-msm (1.8-1) ... 400s Setting up r-cran-testthat (3.2.3-1) ... 400s Processing triggers for libc-bin (2.40-4ubuntu1) ... 400s Processing triggers for man-db (2.13.0-1) ... 401s Processing triggers for install-info (7.1.1-1) ... 401s autopkgtest: DBG: testbed command exited with code 0 401s autopkgtest: DBG: testbed command ['dpkg-query', '--show', '-f', '${Status}', 'r-cran-msm'], kind short, sout pipe, serr pipe, env [] 401s autopkgtest: DBG: testbed command exited with code 0 401s autopkgtest: DBG: testbed command ['sh', '-ec', "dpkg-query --show -f '${Package}\\t${Version}\\n' > /tmp/autopkgtest.ByfMJs/run-unit-test-packages.all"], kind short, sout raw, serr pipe, env [] 402s autopkgtest: DBG: testbed command exited with code 0 402s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.ByfMJs/run-unit-test-packages.all /tmp/autopkgtest-work.52nut64i/out/run-unit-test-packages.all 402s autopkgtest: DBG: got reply from testbed: ok 402s autopkgtest: DBG: testbed command ['test', '-e', '/tmp/autopkgtest.ByfMJs/build.uL2/src'], kind short, sout raw, serr raw, env [] 402s autopkgtest: DBG: testbed command exited with code 0 402s autopkgtest: DBG: copydown: tb path /tmp/autopkgtest.ByfMJs/build.uL2/src already exists 402s autopkgtest [03:29:59]: test run-unit-test: [----------------------- 402s autopkgtest: DBG: testbed command ['su', '-s', '/bin/bash', 'ubuntu', '-c', 'set -e; exec /tmp/autopkgtest.ByfMJs/wrapper.sh --debug --artifacts=/tmp/autopkgtest.ByfMJs/run-unit-test-artifacts --chdir=/tmp/autopkgtest.ByfMJs/build.uL2/src --env=AUTOPKGTEST_TESTBED_ARCH=s390x --env=AUTOPKGTEST_TEST_ARCH=s390x --env=DEB_BUILD_OPTIONS=parallel=2 --env=DEBIAN_FRONTEND=noninteractive --env=LANG=C.UTF-8 --unset-env=LANGUAGE --unset-env=LC_ADDRESS --unset-env=LC_ALL --unset-env=LC_COLLATE --unset-env=LC_CTYPE --unset-env=LC_IDENTIFICATION --unset-env=LC_MEASUREMENT --unset-env=LC_MESSAGES --unset-env=LC_MONETARY --unset-env=LC_NAME --unset-env=LC_NUMERIC --unset-env=LC_PAPER --unset-env=LC_TELEPHONE --unset-env=LC_TIME --script-pid-file=/tmp/autopkgtest_script_pid --source-profile --stderr=/tmp/autopkgtest.ByfMJs/run-unit-test-stderr --stdout=/tmp/autopkgtest.ByfMJs/run-unit-test-stdout --tmp=/tmp/autopkgtest.ByfMJs/autopkgtest_tmp --env=ADT_TEST_TRIGGERS=r-cran-testthat/3.2.3-1 --make-executable=/tmp/autopkgtest.ByfMJs/build.uL2/src/debian/tests/run-unit-test -- /tmp/autopkgtest.ByfMJs/build.uL2/src/debian/tests/run-unit-test'], kind test, sout raw, serr raw, env [] 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: creating AUTOPKGTEST_ARTIFACTS: /tmp/autopkgtest.ByfMJs/run-unit-test-artifacts 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: changing to directory: /tmp/autopkgtest.ByfMJs/build.uL2/src 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: setting environment: AUTOPKGTEST_TESTBED_ARCH=s390x 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: setting environment: AUTOPKGTEST_TEST_ARCH=s390x 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: setting environment: DEB_BUILD_OPTIONS=parallel=2 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: setting environment: DEBIAN_FRONTEND=noninteractive 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: setting environment: LANG=C.UTF-8 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LANGUAGE 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_ADDRESS 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_ALL 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_COLLATE 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_CTYPE 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_IDENTIFICATION 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_MEASUREMENT 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_MESSAGES 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_MONETARY 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_NAME 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_NUMERIC 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_PAPER 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_TELEPHONE 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_TIME 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: will create pid file: /tmp/autopkgtest_script_pid 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: pretending to be a login shell 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: will write standard error to /tmp/autopkgtest.ByfMJs/run-unit-test-stderr 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: will write stdout to /tmp/autopkgtest.ByfMJs/run-unit-test-stdout 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: creating AUTOPKGTEST_TMP: /tmp/autopkgtest.ByfMJs/autopkgtest_tmp 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: setting environment: ADT_TEST_TRIGGERS=r-cran-testthat/3.2.3-1 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: marking as executable: /tmp/autopkgtest.ByfMJs/build.uL2/src/debian/tests/run-unit-test 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: command to run: /tmp/autopkgtest.ByfMJs/build.uL2/src/debian/tests/run-unit-test 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: copying /tmp/tmp.dUwCIUuoUC/out to stdout and file: /tmp/autopkgtest.ByfMJs/run-unit-test-stdout 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: copying /tmp/tmp.dUwCIUuoUC/err to standard error and file: /tmp/autopkgtest.ByfMJs/run-unit-test-stdout 402s /tmp/autopkgtest.ByfMJs/wrapper.sh: writing script pid 2757 to /tmp/autopkgtest_script_pid 402s 402s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 402s Copyright (C) 2024 The R Foundation for Statistical Computing 402s Platform: s390x-ibm-linux-gnu 402s 402s R is free software and comes with ABSOLUTELY NO WARRANTY. 402s You are welcome to redistribute it under certain conditions. 402s Type 'license()' or 'licence()' for distribution details. 402s 402s R is a collaborative project with many contributors. 402s Type 'contributors()' for more information and 402s 'citation()' on how to cite R or R packages in publications. 402s 402s Type 'demo()' for some demos, 'help()' for on-line help, or 402s 'help.start()' for an HTML browser interface to help. 402s Type 'q()' to quit R. 402s 403s > library(testthat) 403s > test_check("msm") 403s Loading required package: msm 406s Error in stat(res) : Error 406s Error in solve.default(0.5 * hess) : 406s system is computationally singular: reciprocal condition number = 9.93401e-17 406s Error in stat(res) : Error 414s 414s Call: 414s msm(formula = fev ~ days, subject = ptnum, data = fev[1:500, ], qmatrix = three.q, hmodel = hmodel1, hcovariates = list(~acute, ~acute, NULL), hcovinits = list(-8, -8, NULL), hconstraint = list(acute = c(1, 1)), death = 3, center = FALSE) 414s 414s Maximum likelihood estimates 414s Baselines are with covariates set to 0 414s 414s Transition intensities 414s Baseline 414s State 1 - State 1 -6.381e-04 (-1.276e-03,-3.192e-04) 414s State 1 - State 2 6.373e-04 ( 3.183e-04, 1.276e-03) 414s State 1 - State 3 8.440e-07 ( 3.375e-21, 2.111e+08) 414s State 2 - State 2 -8.299e-04 (-1.749e-03,-3.938e-04) 414s State 2 - State 3 8.299e-04 ( 3.938e-04, 1.749e-03) 414s 414s Hidden Markov model, 3 states 414s State 1 - normal distribution 414s Parameters: 414s Estimate LCL UCL 414s mean 106.234293 103.83878 108.629802 414s sd 17.066749 15.54712 18.734914 414s acute -6.993605 -10.10295 -3.884258 414s 414s State 2 - normal distribution 414s Parameters: 414s Estimate LCL UCL 414s mean 63.790749 61.40091 66.180592 414s sd 14.166004 12.98525 15.454123 414s acute -6.993605 -10.10295 -3.884258 414s 414s State 3 - identity distribution 414s Parameters: 414s Estimate LCL UCL 414s which 999 NA NA 414s 414s 414s -2 * log-likelihood: 4269.772 415s Hidden Markov model binomial distribution 415s 415s Parameters: size = 40, prob = 0.2 415s Multivariate hidden Markov model with 2 outcomes: 415s Hidden Markov model binomial distribution 415s 415s Parameters: size = 40, prob = 0.3 415s Hidden Markov model binomial distribution 415s 415s Parameters: size = 40, prob = 0.3 415s 415s Call: 415s msm(formula = state ~ years, subject = PTNUM, data = cav, qmatrix = oneway4.q, ematrix = ematrix, deathexact = 4, fixedpars = TRUE) 415s 415s 415s -2 * log-likelihood: 4296.916 417s 417s Call: 417s msm(formula = state ~ years, subject = PTNUM, data = cav, qmatrix = oneway4.q, ematrix = ematrix, initprobs = c(0.8, 0.1, 0.1, 0), est.initprobs = TRUE, deathexact = 4, fixedpars = 1:9, method = "BFGS", control = list(fnscale = 4000, maxit = 10000)) 417s 417s Maximum likelihood estimates 417s 417s Transition intensities 417s Baseline 417s Well - Well -0.1651 417s Well - Mild 0.1480 417s Well - Death 0.0171 417s Mild - Mild -0.2830 417s Mild - Severe 0.2020 417s Mild - Death 0.0810 417s Severe - Severe -0.1260 (-0.126,-0.126) 417s Severe - Death 0.1260 417s 417s Misclassification probabilities 417s Baseline 417s Obs Well | Well 0.9 (0.9,0.9) 417s Obs Mild | Well 0.1 417s Obs Well | Mild 0.1 417s Obs Mild | Mild 0.8 417s Obs Severe | Mild 0.1 417s Obs Mild | Severe 0.1 417s Obs Severe | Severe 0.9 (0.9,0.9) 417s 417s Initial state occupancy probabilities 417s Estimate LCL UCL 417s State 1 0.9995418040 8.909606e-01 0.99998008 417s State 2 0.0001849772 4.097837e-07 0.07836076 417s State 3 0.0002732188 2.500337e-06 0.03221896 417s State 4 0.0000000000 0.000000e+00 0.00000000 417s 417s -2 * log-likelihood: 4297.466 417s 417s Observed numbers of individuals occupying states at each time 417s 417s State 1 State 2 State 3 State 4 Total 417s 0 622 0 0 0 622 417s 1.94602739726027 537 4 5 54 600 417s 3.89205479452054 356 35 24 87 502 417s 5.83808219178081 208 41 28 127 404 417s 7.78410958904108 122 44 27 158 351 417s 9.73013698630135 71 25 22 187 305 417s 11.6761643835616 31 11 13 218 273 417s 13.6221917808219 12 6 5 236 259 417s 15.5682191780822 5 1 3 244 253 417s 17.5142465753424 1 0 2 249 252 417s 19.4602739726027 0 0 0 251 251 417s 417s Expected numbers of individuals occupying states at each time 417s 417s Well Mild Severe Death Total 417s 0 454.060000 105.74000 62.20000 0.00000 622 417s 1.94602739726027 325.710210 142.31588 85.87563 46.09828 600 417s 3.89205479452054 201.519656 121.76444 94.55263 84.16327 502 417s 5.83808219178081 119.419915 89.03744 88.74180 106.80084 404 417s 7.78410958904108 76.147715 66.14910 82.14786 126.55532 351 417s 9.73013698630135 48.439143 47.43163 71.31882 137.81040 305 417s 11.6761643835616 31.676873 34.25326 60.87352 146.19635 273 417s 13.6221917808219 21.922294 25.83213 53.18927 158.05631 259 417s 15.5682191780822 15.602058 19.85855 46.59544 170.94396 253 417s 17.5142465753424 11.311456 15.46051 40.76362 184.46441 252 417s 19.4602739726027 8.194417 11.98037 35.07316 195.75205 251 417s 417s Observed prevalences of states (percentages of population at risk) 417s 417s State 1 State 2 State 3 State 4 417s 0 100.0000000 0.0000000 0.0000000 0.00000 417s 1.94602739726027 89.5000000 0.6666667 0.8333333 9.00000 417s 3.89205479452054 70.9163347 6.9721116 4.7808765 17.33068 417s 5.83808219178081 51.4851485 10.1485149 6.9306931 31.43564 417s 7.78410958904108 34.7578348 12.5356125 7.6923077 45.01425 417s 9.73013698630135 23.2786885 8.1967213 7.2131148 61.31148 417s 11.6761643835616 11.3553114 4.0293040 4.7619048 79.85348 417s 13.6221917808219 4.6332046 2.3166023 1.9305019 91.11969 417s 15.5682191780822 1.9762846 0.3952569 1.1857708 96.44269 417s 17.5142465753424 0.3968254 0.0000000 0.7936508 98.80952 417s 19.4602739726027 0.0000000 0.0000000 0.0000000 100.00000 417s 417s Expected prevalences of states (percentages of population at risk) 417s 417s Well Mild Severe Death 417s 0 73.000000 17.000000 10.00000 0.000000 417s 1.94602739726027 54.285035 23.719313 14.31260 7.683047 417s 3.89205479452054 40.143358 24.255864 18.83519 16.765592 417s 5.83808219178081 29.559385 22.038971 21.96579 26.435852 417s 7.78410958904108 21.694506 18.845898 23.40395 36.055648 417s 9.73013698630135 15.881686 15.551355 23.38322 45.183739 417s 11.6761643835616 11.603250 12.546980 22.29799 53.551777 417s 13.6221917808219 8.464206 9.973795 20.53640 61.025602 417s 15.5682191780822 6.166821 7.849229 18.41717 67.566782 417s 17.5142465753424 4.488673 6.135124 16.17604 73.200163 417s 19.4602739726027 3.264708 4.773057 13.97337 77.988863 418s 418s Call: 418s msm(formula = state ~ years, subject = PTNUM, data = cav, qmatrix = twoway4.q, deathexact = TRUE, fixedpars = TRUE, method = "BFGS", control = list(trace = 5, REPORT = 1)) 418s 418s 418s -2 * log-likelihood: 4908.817 418s 418s Call: 418s msm(formula = state ~ years, subject = PTNUM, data = cav, qmatrix = twoway4.q, deathexact = TRUE, fixedpars = TRUE, method = "BFGS", control = list(trace = 5, REPORT = 1)) 418s 418s -2 * log-likelihood: 4908.817 419s 419s Call: 419s msm(formula = state ~ months, subject = ptnum, data = psor, qmatrix = psor.q, covariates = ~ollwsdrt + hieffusn, constraint = list(hieffusn = c(1, 1, 1), ollwsdrt = c(1, 1, 2)), control = list(fnscale = 1)) 419s 419s Maximum likelihood estimates 419s Baselines are with covariates set to their means 419s 419s Transition intensities with hazard ratios for each covariate 419s Baseline ollwsdrt 419s State 1 - State 1 -0.09594 (-0.1216,-0.0757) 419s State 1 - State 2 0.09594 ( 0.0757, 0.1216) 0.5652 (0.3853,0.829) 419s State 2 - State 2 -0.16431 (-0.2076,-0.1300) 419s State 2 - State 3 0.16431 ( 0.1300, 0.2076) 0.5652 (0.3853,0.829) 419s State 3 - State 3 -0.25438 (-0.3396,-0.1905) 419s State 3 - State 4 0.25438 ( 0.1905, 0.3396) 1.6408 (0.8154,3.302) 419s hieffusn 419s State 1 - State 1 419s State 1 - State 2 1.646 (1.148,2.359) 419s State 2 - State 2 419s State 2 - State 3 1.646 (1.148,2.359) 419s State 3 - State 3 419s State 3 - State 4 1.646 (1.148,2.359) 419s 419s -2 * log-likelihood: 1114.899 419s 419s Call: 419s msm(formula = state ~ months, subject = ptnum, data = psor, qmatrix = psor.q, covariates = ~ollwsdrt + hieffusn, constraint = list(hieffusn = c(1, 1, 1), ollwsdrt = c(1, 1, 2)), control = list(fnscale = 1)) 419s 419s Maximum likelihood estimates: 419s Transition intensity matrix with covariates set to their means 419s 419s State 1 State 2 419s State 1 -0.09594 (-0.1216,-0.0757) 0.09594 ( 0.0757, 0.1216) 419s State 2 0 -0.16431 (-0.2076,-0.1300) 419s State 3 0 0 419s State 4 0 0 419s State 3 State 4 419s State 1 0 0 419s State 2 0.16431 ( 0.1300, 0.2076) 0 419s State 3 -0.25438 (-0.3396,-0.1905) 0.25438 ( 0.1905, 0.3396) 419s State 4 0 0 419s 419s Log-linear effects of ollwsdrt 419s 419s State 1 State 2 State 3 419s State 1 0 -0.5706 (-0.9536,-0.1876) 0 419s State 2 0 0 -0.5706 (-0.9536,-0.1876) 419s State 3 0 0 0 419s State 4 0 0 0 419s State 4 419s State 1 0 419s State 2 0 419s State 3 0.4952 (-0.2041, 1.1944) 419s State 4 0 419s 419s Log-linear effects of hieffusn 419s 419s State 1 State 2 State 3 419s State 1 0 0.4983 (0.1383,0.8584) 0 419s State 2 0 0 0.4983 (0.1383,0.8584) 419s State 3 0 0 0 419s State 4 0 0 0 419s State 4 419s State 1 0 419s State 2 0 419s State 3 0.4983 (0.1383,0.8584) 419s State 4 0 419s 419s -2 * log-likelihood: 1114.899 433s State 1 State 2 433s State 1 -0.09594 (-0.1216,-0.0757) 0.09594 ( 0.0757, 0.1216) 433s State 2 0 -0.16431 (-0.2076,-0.1300) 433s State 3 0 0 433s State 4 0 0 433s State 3 State 4 433s State 1 0 0 433s State 2 0.16431 ( 0.1300, 0.2076) 0 433s State 3 -0.25438 (-0.3396,-0.1905) 0.25438 ( 0.1905, 0.3396) 433s State 4 0 0 435s Imputing sampling times after deaths... 435s Calculating replicates of test statistics for imputations... 447s [ FAIL 0 | WARN 0 | SKIP 7 | PASS 597 ] 447s 447s ══ Skipped tests (7) ═══════════════════════════════════════════════════════════ 447s • On CRAN (7): 'test_draic.r:25:3', 'test_models_hmm.r:186:3', 447s 'test_models.r:780:3', 'test_pearson.R:24:3', 'test_phase.R:9:3', 447s 'test_simul.R:2:3', 'test_weights.R:42:3' 447s 447s [ FAIL 0 | WARN 0 | SKIP 7 | PASS 597 ] 447s > 447s /tmp/autopkgtest.ByfMJs/wrapper.sh: checking for leaked background processes... 447s /tmp/autopkgtest.ByfMJs/wrapper.sh: waiting for tee/cat subprocesses... 447s /tmp/autopkgtest.ByfMJs/wrapper.sh: cleaning up... 447s /tmp/autopkgtest.ByfMJs/wrapper.sh: Exit status: 0 447s autopkgtest: DBG: testbed command exited with code 0 448s autopkgtest [03:30:45]: test run-unit-test: -----------------------] 448s autopkgtest: DBG: testbed executing test finished with exit status 0 448s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.ByfMJs/run-unit-test-stdout /tmp/autopkgtest-work.52nut64i/out/run-unit-test-stdout 448s autopkgtest: DBG: got reply from testbed: ok 448s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.ByfMJs/run-unit-test-stderr /tmp/autopkgtest-work.52nut64i/out/run-unit-test-stderr 448s autopkgtest: DBG: got reply from testbed: ok 448s autopkgtest [03:30:45]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 448s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.ByfMJs/run-unit-test-artifacts/ /tmp/autopkgtest-work.52nut64i/out/artifacts/ 448s run-unit-test PASS 448s autopkgtest: DBG: got reply from testbed: ok 448s autopkgtest: DBG: testbed command ['rm', '-rf', '/tmp/autopkgtest.ByfMJs/run-unit-test-artifacts', '/tmp/autopkgtest.ByfMJs/autopkgtest_tmp'], kind short, sout raw, serr pipe, env [] 449s autopkgtest: DBG: testbed command exited with code 0 449s autopkgtest [03:30:46]: test pkg-r-autopkgtest: preparing testbed 449s autopkgtest: DBG: testbed reset: modified=False, deps_installed=['r-cran-msm', 'r-cran-minqa', 'r-cran-doparallel', 'r-cran-foreach', 'r-cran-numderiv', 'r-cran-testthat', 'r-cran-covr'], deps_new=['r-cran-msm', 'r-cran-minqa', 'r-cran-doparallel', 'r-cran-foreach', 'r-cran-numderiv', 'r-cran-testthat', 'r-cran-covr', 'pkg-r-autopkgtest'] 449s autopkgtest: DBG: Binaries: no registered binaries, not publishing anything 449s autopkgtest: DBG: install_deps: deps_new=['r-cran-msm', 'r-cran-minqa', 'r-cran-doparallel', 'r-cran-foreach', 'r-cran-numderiv', 'r-cran-testthat', 'r-cran-covr', 'pkg-r-autopkgtest'] 449s autopkgtest: DBG: install-deps: satisfying r-cran-msm, r-cran-minqa, r-cran-doparallel, r-cran-foreach, r-cran-numderiv, r-cran-testthat, r-cran-covr, pkg-r-autopkgtest 449s autopkgtest: DBG: can use apt-get on testbed: True 449s autopkgtest: DBG: testbed command ['/bin/sh', '-ec', '"$@" 3>&2 2>&1', 'run_apt_command', '/usr/bin/eatmydata', 'apt-get', '--quiet', '--assume-yes', '-o=APT::Status-Fd=3', '-o=APT::Install-Recommends=false', '-o=Dpkg::Options::=--force-confnew', '-o=Debug::pkgProblemResolver=true', 'satisfy', 'r-cran-msm, r-cran-minqa, r-cran-doparallel, r-cran-foreach, r-cran-numderiv, r-cran-testthat, r-cran-covr, pkg-r-autopkgtest'], kind install, sout raw, serr pipe, env ['DEBIAN_FRONTEND=noninteractive', 'APT_LISTBUGS_FRONTEND=none', 'APT_LISTCHANGES_FRONTEND=none'] 449s Reading package lists... 449s Building dependency tree... 449s Reading state information... 449s Starting pkgProblemResolver with broken count: 0 449s Starting 2 pkgProblemResolver with broken count: 0 449s Done 450s The following NEW packages will be installed: 450s build-essential cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu 450s dctrl-tools g++ g++-14 g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14 450s gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-14 450s gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools libasan8 450s libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev 450s libgfortran-14-dev libicu-dev libisl23 libitm1 libjpeg-dev 450s libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblzma-dev libmpc3 450s libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 450s libpkgconf3 libpng-dev libreadline-dev libstdc++-14-dev libtirpc-dev 450s libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev zlib1g-dev 450s 0 upgraded, 51 newly installed, 0 to remove and 0 not upgraded. 450s Need to get 82.1 MB of archives. 450s After this operation, 278 MB of additional disk space will be used. 450s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libisl23 s390x 0.27-1 [704 kB] 451s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB] 451s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-13ubuntu1 [9570 kB] 509s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14 s390x 14.2.0-13ubuntu1 [1026 B] 509s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [5452 B] 509s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x cpp s390x 4:14.1.0-2ubuntu1 [22.4 kB] 510s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libcc1-0 s390x 14.2.0-13ubuntu1 [50.7 kB] 510s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libitm1 s390x 14.2.0-13ubuntu1 [30.9 kB] 510s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libasan8 s390x 14.2.0-13ubuntu1 [2964 kB] 533s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libubsan1 s390x 14.2.0-13ubuntu1 [1184 kB] 542s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-14-dev s390x 14.2.0-13ubuntu1 [1037 kB] 549s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-13ubuntu1 [18.7 MB] 667s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14 s390x 14.2.0-13ubuntu1 [523 kB] 670s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [1204 B] 670s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x gcc s390x 4:14.1.0-2ubuntu1 [4996 B] 670s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++-14-dev s390x 14.2.0-13ubuntu1 [2612 kB] 697s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-13ubuntu1 [11.0 MB] 777s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14 s390x 14.2.0-13ubuntu1 [21.1 kB] 777s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x g++-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [956 B] 777s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x g++ s390x 4:14.1.0-2ubuntu1 [1076 B] 777s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x build-essential s390x 12.10ubuntu1 [4930 B] 777s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x dctrl-tools s390x 2.24-3build3 [106 kB] 778s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran-14-dev s390x 14.2.0-13ubuntu1 [654 kB] 782s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14-s390x-linux-gnu s390x 14.2.0-13ubuntu1 [10.3 MB] 856s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14 s390x 14.2.0-13ubuntu1 [13.2 kB] 856s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [1016 B] 856s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran s390x 4:14.1.0-2ubuntu1 [1160 B] 856s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x icu-devtools s390x 76.1-1ubuntu2 [225 kB] 857s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x libblas-dev s390x 3.12.0-4 [239 kB] 859s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libbz2-dev s390x 1.0.8-6 [39.1 kB] 860s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate-dev s390x 1.23-1 [52.2 kB] 860s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libicu-dev s390x 76.1-1ubuntu2 [12.2 MB] 954s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8-dev s390x 2.1.5-3ubuntu2 [281 kB] 956s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B] 956s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B] 956s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack-dev s390x 3.12.0-4 [5956 kB] 1007s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libncurses-dev s390x 6.5-2 [404 kB] 1010s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-16-0 s390x 10.42-4ubuntu3 [236 kB] 1012s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-32-0 s390x 10.42-4ubuntu3 [221 kB] 1014s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-posix3 s390x 10.42-4ubuntu3 [6820 B] 1014s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-dev s390x 10.42-4ubuntu3 [815 kB] 1023s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libpkgconf3 s390x 1.8.1-4 [31.2 kB] 1023s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB] 1033s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x libpng-dev s390x 1.6.44-3 [279 kB] 1038s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libreadline-dev s390x 8.2-6 [187 kB] 1039s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x liblzma-dev s390x 5.6.3-1 [183 kB] 1040s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf-bin s390x 1.8.1-4 [21.5 kB] 1041s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf s390x 1.8.1-4 [16.7 kB] 1041s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x libtirpc-dev s390x 1.3.4+ds-1.3 [196 kB] 1043s Get:50 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-dev all 4.4.2-1build1 [4342 B] 1043s Get:51 http://ftpmaster.internal/ubuntu plucky/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 1043s Fetched 82.1 MB in 9min 53s (138 kB/s) 1043s Selecting previously unselected package libisl23:s390x. 1043s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 64835 files and directories currently installed.) 1043s Preparing to unpack .../00-libisl23_0.27-1_s390x.deb ... 1043s Unpacking libisl23:s390x (0.27-1) ... 1043s Selecting previously unselected package libmpc3:s390x. 1043s Preparing to unpack .../01-libmpc3_1.3.1-1build2_s390x.deb ... 1043s Unpacking libmpc3:s390x (1.3.1-1build2) ... 1043s Selecting previously unselected package cpp-14-s390x-linux-gnu. 1043s Preparing to unpack .../02-cpp-14-s390x-linux-gnu_14.2.0-13ubuntu1_s390x.deb ... 1043s Unpacking cpp-14-s390x-linux-gnu (14.2.0-13ubuntu1) ... 1043s Selecting previously unselected package cpp-14. 1043s Preparing to unpack .../03-cpp-14_14.2.0-13ubuntu1_s390x.deb ... 1043s Unpacking cpp-14 (14.2.0-13ubuntu1) ... 1043s Selecting previously unselected package cpp-s390x-linux-gnu. 1043s Preparing to unpack .../04-cpp-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ... 1043s Unpacking cpp-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 1043s Selecting previously unselected package cpp. 1043s Preparing to unpack .../05-cpp_4%3a14.1.0-2ubuntu1_s390x.deb ... 1043s Unpacking cpp (4:14.1.0-2ubuntu1) ... 1043s Selecting previously unselected package libcc1-0:s390x. 1043s Preparing to unpack .../06-libcc1-0_14.2.0-13ubuntu1_s390x.deb ... 1043s Unpacking libcc1-0:s390x (14.2.0-13ubuntu1) ... 1043s Selecting previously unselected package libitm1:s390x. 1043s Preparing to unpack .../07-libitm1_14.2.0-13ubuntu1_s390x.deb ... 1043s Unpacking libitm1:s390x (14.2.0-13ubuntu1) ... 1043s Selecting previously unselected package libasan8:s390x. 1043s Preparing to unpack .../08-libasan8_14.2.0-13ubuntu1_s390x.deb ... 1043s Unpacking libasan8:s390x (14.2.0-13ubuntu1) ... 1043s Selecting previously unselected package libubsan1:s390x. 1043s Preparing to unpack .../09-libubsan1_14.2.0-13ubuntu1_s390x.deb ... 1043s Unpacking libubsan1:s390x (14.2.0-13ubuntu1) ... 1043s Selecting previously unselected package libgcc-14-dev:s390x. 1043s Preparing to unpack .../10-libgcc-14-dev_14.2.0-13ubuntu1_s390x.deb ... 1043s Unpacking libgcc-14-dev:s390x (14.2.0-13ubuntu1) ... 1043s Selecting previously unselected package gcc-14-s390x-linux-gnu. 1043s Preparing to unpack .../11-gcc-14-s390x-linux-gnu_14.2.0-13ubuntu1_s390x.deb ... 1043s Unpacking gcc-14-s390x-linux-gnu (14.2.0-13ubuntu1) ... 1044s Selecting previously unselected package gcc-14. 1044s Preparing to unpack .../12-gcc-14_14.2.0-13ubuntu1_s390x.deb ... 1044s Unpacking gcc-14 (14.2.0-13ubuntu1) ... 1044s Selecting previously unselected package gcc-s390x-linux-gnu. 1044s Preparing to unpack .../13-gcc-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ... 1044s Unpacking gcc-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 1044s Selecting previously unselected package gcc. 1044s Preparing to unpack .../14-gcc_4%3a14.1.0-2ubuntu1_s390x.deb ... 1044s Unpacking gcc (4:14.1.0-2ubuntu1) ... 1044s Selecting previously unselected package libstdc++-14-dev:s390x. 1044s Preparing to unpack .../15-libstdc++-14-dev_14.2.0-13ubuntu1_s390x.deb ... 1044s Unpacking libstdc++-14-dev:s390x (14.2.0-13ubuntu1) ... 1044s Selecting previously unselected package g++-14-s390x-linux-gnu. 1044s Preparing to unpack .../16-g++-14-s390x-linux-gnu_14.2.0-13ubuntu1_s390x.deb ... 1044s Unpacking g++-14-s390x-linux-gnu (14.2.0-13ubuntu1) ... 1044s Selecting previously unselected package g++-14. 1044s Preparing to unpack .../17-g++-14_14.2.0-13ubuntu1_s390x.deb ... 1044s Unpacking g++-14 (14.2.0-13ubuntu1) ... 1044s Selecting previously unselected package g++-s390x-linux-gnu. 1044s Preparing to unpack .../18-g++-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ... 1044s Unpacking g++-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 1044s Selecting previously unselected package g++. 1044s Preparing to unpack .../19-g++_4%3a14.1.0-2ubuntu1_s390x.deb ... 1044s Unpacking g++ (4:14.1.0-2ubuntu1) ... 1044s Selecting previously unselected package build-essential. 1044s Preparing to unpack .../20-build-essential_12.10ubuntu1_s390x.deb ... 1044s Unpacking build-essential (12.10ubuntu1) ... 1044s Selecting previously unselected package dctrl-tools. 1044s Preparing to unpack .../21-dctrl-tools_2.24-3build3_s390x.deb ... 1044s Unpacking dctrl-tools (2.24-3build3) ... 1044s Selecting previously unselected package libgfortran-14-dev:s390x. 1044s Preparing to unpack .../22-libgfortran-14-dev_14.2.0-13ubuntu1_s390x.deb ... 1044s Unpacking libgfortran-14-dev:s390x (14.2.0-13ubuntu1) ... 1044s Selecting previously unselected package gfortran-14-s390x-linux-gnu. 1044s Preparing to unpack .../23-gfortran-14-s390x-linux-gnu_14.2.0-13ubuntu1_s390x.deb ... 1044s Unpacking gfortran-14-s390x-linux-gnu (14.2.0-13ubuntu1) ... 1044s Selecting previously unselected package gfortran-14. 1044s Preparing to unpack .../24-gfortran-14_14.2.0-13ubuntu1_s390x.deb ... 1044s Unpacking gfortran-14 (14.2.0-13ubuntu1) ... 1044s Selecting previously unselected package gfortran-s390x-linux-gnu. 1044s Preparing to unpack .../25-gfortran-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ... 1044s Unpacking gfortran-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 1044s Selecting previously unselected package gfortran. 1044s Preparing to unpack .../26-gfortran_4%3a14.1.0-2ubuntu1_s390x.deb ... 1044s Unpacking gfortran (4:14.1.0-2ubuntu1) ... 1044s Selecting previously unselected package icu-devtools. 1044s Preparing to unpack .../27-icu-devtools_76.1-1ubuntu2_s390x.deb ... 1044s Unpacking icu-devtools (76.1-1ubuntu2) ... 1044s Selecting previously unselected package libblas-dev:s390x. 1044s Preparing to unpack .../28-libblas-dev_3.12.0-4_s390x.deb ... 1044s Unpacking libblas-dev:s390x (3.12.0-4) ... 1044s Selecting previously unselected package libbz2-dev:s390x. 1044s Preparing to unpack .../29-libbz2-dev_1.0.8-6_s390x.deb ... 1044s Unpacking libbz2-dev:s390x (1.0.8-6) ... 1044s Selecting previously unselected package libdeflate-dev:s390x. 1044s Preparing to unpack .../30-libdeflate-dev_1.23-1_s390x.deb ... 1044s Unpacking libdeflate-dev:s390x (1.23-1) ... 1044s Selecting previously unselected package libicu-dev:s390x. 1044s Preparing to unpack .../31-libicu-dev_76.1-1ubuntu2_s390x.deb ... 1044s Unpacking libicu-dev:s390x (76.1-1ubuntu2) ... 1044s Selecting previously unselected package libjpeg-turbo8-dev:s390x. 1044s Preparing to unpack .../32-libjpeg-turbo8-dev_2.1.5-3ubuntu2_s390x.deb ... 1044s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ... 1044s Selecting previously unselected package libjpeg8-dev:s390x. 1044s Preparing to unpack .../33-libjpeg8-dev_8c-2ubuntu11_s390x.deb ... 1044s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ... 1044s Selecting previously unselected package libjpeg-dev:s390x. 1044s Preparing to unpack .../34-libjpeg-dev_8c-2ubuntu11_s390x.deb ... 1044s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ... 1044s Selecting previously unselected package liblapack-dev:s390x. 1044s Preparing to unpack .../35-liblapack-dev_3.12.0-4_s390x.deb ... 1044s Unpacking liblapack-dev:s390x (3.12.0-4) ... 1045s Selecting previously unselected package libncurses-dev:s390x. 1045s Preparing to unpack .../36-libncurses-dev_6.5-2_s390x.deb ... 1045s Unpacking libncurses-dev:s390x (6.5-2) ... 1045s Selecting previously unselected package libpcre2-16-0:s390x. 1045s Preparing to unpack .../37-libpcre2-16-0_10.42-4ubuntu3_s390x.deb ... 1045s Unpacking libpcre2-16-0:s390x (10.42-4ubuntu3) ... 1045s Selecting previously unselected package libpcre2-32-0:s390x. 1045s Preparing to unpack .../38-libpcre2-32-0_10.42-4ubuntu3_s390x.deb ... 1045s Unpacking libpcre2-32-0:s390x (10.42-4ubuntu3) ... 1045s Selecting previously unselected package libpcre2-posix3:s390x. 1045s Preparing to unpack .../39-libpcre2-posix3_10.42-4ubuntu3_s390x.deb ... 1045s Unpacking libpcre2-posix3:s390x (10.42-4ubuntu3) ... 1045s Selecting previously unselected package libpcre2-dev:s390x. 1045s Preparing to unpack .../40-libpcre2-dev_10.42-4ubuntu3_s390x.deb ... 1045s Unpacking libpcre2-dev:s390x (10.42-4ubuntu3) ... 1045s Selecting previously unselected package libpkgconf3:s390x. 1045s Preparing to unpack .../41-libpkgconf3_1.8.1-4_s390x.deb ... 1045s Unpacking libpkgconf3:s390x (1.8.1-4) ... 1045s Selecting previously unselected package zlib1g-dev:s390x. 1045s Preparing to unpack .../42-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_s390x.deb ... 1045s Unpacking zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 1045s Selecting previously unselected package libpng-dev:s390x. 1045s Preparing to unpack .../43-libpng-dev_1.6.44-3_s390x.deb ... 1045s Unpacking libpng-dev:s390x (1.6.44-3) ... 1045s Selecting previously unselected package libreadline-dev:s390x. 1045s Preparing to unpack .../44-libreadline-dev_8.2-6_s390x.deb ... 1045s Unpacking libreadline-dev:s390x (8.2-6) ... 1045s Selecting previously unselected package liblzma-dev:s390x. 1045s Preparing to unpack .../45-liblzma-dev_5.6.3-1_s390x.deb ... 1045s Unpacking liblzma-dev:s390x (5.6.3-1) ... 1045s Selecting previously unselected package pkgconf-bin. 1045s Preparing to unpack .../46-pkgconf-bin_1.8.1-4_s390x.deb ... 1045s Unpacking pkgconf-bin (1.8.1-4) ... 1045s Selecting previously unselected package pkgconf:s390x. 1045s Preparing to unpack .../47-pkgconf_1.8.1-4_s390x.deb ... 1045s Unpacking pkgconf:s390x (1.8.1-4) ... 1045s Selecting previously unselected package libtirpc-dev:s390x. 1045s Preparing to unpack .../48-libtirpc-dev_1.3.4+ds-1.3_s390x.deb ... 1045s Unpacking libtirpc-dev:s390x (1.3.4+ds-1.3) ... 1045s Selecting previously unselected package r-base-dev. 1045s Preparing to unpack .../49-r-base-dev_4.4.2-1build1_all.deb ... 1045s Unpacking r-base-dev (4.4.2-1build1) ... 1045s Selecting previously unselected package pkg-r-autopkgtest. 1045s Preparing to unpack .../50-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 1045s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 1045s Setting up libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ... 1045s Setting up libncurses-dev:s390x (6.5-2) ... 1045s Setting up libreadline-dev:s390x (8.2-6) ... 1045s Setting up libpcre2-16-0:s390x (10.42-4ubuntu3) ... 1045s Setting up libpcre2-32-0:s390x (10.42-4ubuntu3) ... 1045s Setting up libtirpc-dev:s390x (1.3.4+ds-1.3) ... 1045s Setting up libpkgconf3:s390x (1.8.1-4) ... 1045s Setting up libmpc3:s390x (1.3.1-1build2) ... 1045s Setting up icu-devtools (76.1-1ubuntu2) ... 1045s Setting up pkgconf-bin (1.8.1-4) ... 1045s Setting up liblzma-dev:s390x (5.6.3-1) ... 1045s Setting up libubsan1:s390x (14.2.0-13ubuntu1) ... 1045s Setting up zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 1045s Setting up libpcre2-posix3:s390x (10.42-4ubuntu3) ... 1045s Setting up libasan8:s390x (14.2.0-13ubuntu1) ... 1045s Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ... 1045s Setting up libisl23:s390x (0.27-1) ... 1045s Setting up libdeflate-dev:s390x (1.23-1) ... 1045s Setting up libicu-dev:s390x (76.1-1ubuntu2) ... 1045s Setting up libcc1-0:s390x (14.2.0-13ubuntu1) ... 1045s Setting up libblas-dev:s390x (3.12.0-4) ... 1045s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so to provide /usr/lib/s390x-linux-gnu/libblas.so (libblas.so-s390x-linux-gnu) in auto mode 1045s Setting up dctrl-tools (2.24-3build3) ... 1045s Setting up libitm1:s390x (14.2.0-13ubuntu1) ... 1045s Setting up libbz2-dev:s390x (1.0.8-6) ... 1045s Setting up libpcre2-dev:s390x (10.42-4ubuntu3) ... 1045s Setting up libpng-dev:s390x (1.6.44-3) ... 1045s Setting up libjpeg-dev:s390x (8c-2ubuntu11) ... 1045s Setting up pkgconf:s390x (1.8.1-4) ... 1045s Setting up liblapack-dev:s390x (3.12.0-4) ... 1045s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode 1045s Setting up cpp-14-s390x-linux-gnu (14.2.0-13ubuntu1) ... 1045s Setting up cpp-14 (14.2.0-13ubuntu1) ... 1045s Setting up libgcc-14-dev:s390x (14.2.0-13ubuntu1) ... 1045s Setting up libstdc++-14-dev:s390x (14.2.0-13ubuntu1) ... 1045s Setting up libgfortran-14-dev:s390x (14.2.0-13ubuntu1) ... 1045s Setting up cpp-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 1045s Setting up gcc-14-s390x-linux-gnu (14.2.0-13ubuntu1) ... 1045s Setting up gcc-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 1045s Setting up g++-14-s390x-linux-gnu (14.2.0-13ubuntu1) ... 1045s Setting up cpp (4:14.1.0-2ubuntu1) ... 1045s Setting up gfortran-14-s390x-linux-gnu (14.2.0-13ubuntu1) ... 1045s Setting up g++-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 1045s Setting up gcc-14 (14.2.0-13ubuntu1) ... 1045s Setting up g++-14 (14.2.0-13ubuntu1) ... 1045s Setting up gfortran-14 (14.2.0-13ubuntu1) ... 1045s Setting up gfortran-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 1045s Setting up gcc (4:14.1.0-2ubuntu1) ... 1045s Setting up g++ (4:14.1.0-2ubuntu1) ... 1045s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 1045s Setting up build-essential (12.10ubuntu1) ... 1045s Setting up gfortran (4:14.1.0-2ubuntu1) ... 1045s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 1045s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 1045s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 1045s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 1045s Setting up r-base-dev (4.4.2-1build1) ... 1045s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 1045s Processing triggers for libc-bin (2.40-4ubuntu1) ... 1045s Processing triggers for man-db (2.13.0-1) ... 1046s Processing triggers for install-info (7.1.1-1) ... 1046s autopkgtest: DBG: testbed command exited with code 0 1046s autopkgtest: DBG: testbed command ['dpkg-query', '--show', '-f', '${Status}', 'r-cran-msm'], kind short, sout pipe, serr pipe, env [] 1046s autopkgtest: DBG: testbed command exited with code 0 1046s autopkgtest: DBG: testbed command ['sh', '-ec', "dpkg-query --show -f '${Package}\\t${Version}\\n' > /tmp/autopkgtest.ByfMJs/pkg-r-autopkgtest-packages.all"], kind short, sout raw, serr pipe, env [] 1047s autopkgtest: DBG: testbed command exited with code 0 1047s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.ByfMJs/pkg-r-autopkgtest-packages.all /tmp/autopkgtest-work.52nut64i/out/pkg-r-autopkgtest-packages.all 1047s autopkgtest: DBG: got reply from testbed: ok 1047s autopkgtest: DBG: testbed command ['test', '-e', '/tmp/autopkgtest.ByfMJs/build.uL2/src'], kind short, sout raw, serr raw, env [] 1047s autopkgtest: DBG: testbed command exited with code 0 1047s autopkgtest: DBG: copydown: tb path /tmp/autopkgtest.ByfMJs/build.uL2/src already exists 1047s autopkgtest [03:40:44]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 1047s autopkgtest [03:40:44]: test pkg-r-autopkgtest: [----------------------- 1047s autopkgtest: DBG: testbed command ['su', '-s', '/bin/bash', 'ubuntu', '-c', 'set -e; exec /tmp/autopkgtest.ByfMJs/wrapper.sh --debug --artifacts=/tmp/autopkgtest.ByfMJs/pkg-r-autopkgtest-artifacts --chdir=/tmp/autopkgtest.ByfMJs/build.uL2/src --env=AUTOPKGTEST_TESTBED_ARCH=s390x --env=AUTOPKGTEST_TEST_ARCH=s390x --env=DEB_BUILD_OPTIONS=parallel=2 --env=DEBIAN_FRONTEND=noninteractive --env=LANG=C.UTF-8 --unset-env=LANGUAGE --unset-env=LC_ADDRESS --unset-env=LC_ALL --unset-env=LC_COLLATE --unset-env=LC_CTYPE --unset-env=LC_IDENTIFICATION --unset-env=LC_MEASUREMENT --unset-env=LC_MESSAGES --unset-env=LC_MONETARY --unset-env=LC_NAME --unset-env=LC_NUMERIC --unset-env=LC_PAPER --unset-env=LC_TELEPHONE --unset-env=LC_TIME --script-pid-file=/tmp/autopkgtest_script_pid --source-profile --stderr=/tmp/autopkgtest.ByfMJs/pkg-r-autopkgtest-stderr --stdout=/tmp/autopkgtest.ByfMJs/pkg-r-autopkgtest-stdout --tmp=/tmp/autopkgtest.ByfMJs/autopkgtest_tmp --env=ADT_TEST_TRIGGERS=r-cran-testthat/3.2.3-1 -- bash -ec /usr/share/dh-r/pkg-r-autopkgtest'], kind test, sout raw, serr raw, env [] 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: creating AUTOPKGTEST_ARTIFACTS: /tmp/autopkgtest.ByfMJs/pkg-r-autopkgtest-artifacts 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: changing to directory: /tmp/autopkgtest.ByfMJs/build.uL2/src 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: setting environment: AUTOPKGTEST_TESTBED_ARCH=s390x 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: setting environment: AUTOPKGTEST_TEST_ARCH=s390x 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: setting environment: DEB_BUILD_OPTIONS=parallel=2 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: setting environment: DEBIAN_FRONTEND=noninteractive 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: setting environment: LANG=C.UTF-8 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LANGUAGE 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_ADDRESS 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_ALL 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_COLLATE 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_CTYPE 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_IDENTIFICATION 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_MEASUREMENT 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_MESSAGES 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_MONETARY 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_NAME 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_NUMERIC 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_PAPER 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_TELEPHONE 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: unsetting environment: LC_TIME 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: will create pid file: /tmp/autopkgtest_script_pid 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: pretending to be a login shell 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: will write standard error to /tmp/autopkgtest.ByfMJs/pkg-r-autopkgtest-stderr 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: will write stdout to /tmp/autopkgtest.ByfMJs/pkg-r-autopkgtest-stdout 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: creating AUTOPKGTEST_TMP: /tmp/autopkgtest.ByfMJs/autopkgtest_tmp 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: setting environment: ADT_TEST_TRIGGERS=r-cran-testthat/3.2.3-1 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: command to run: bash -ec /usr/share/dh-r/pkg-r-autopkgtest 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: copying /tmp/tmp.zN2Pt0QZOc/out to stdout and file: /tmp/autopkgtest.ByfMJs/pkg-r-autopkgtest-stdout 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: copying /tmp/tmp.zN2Pt0QZOc/err to standard error and file: /tmp/autopkgtest.ByfMJs/pkg-r-autopkgtest-stdout 1048s /tmp/autopkgtest.ByfMJs/wrapper.sh: writing script pid 3543 to /tmp/autopkgtest_script_pid 1048s Test: Try to load the R library msm 1048s 1048s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 1048s Copyright (C) 2024 The R Foundation for Statistical Computing 1048s Platform: s390x-ibm-linux-gnu 1048s 1048s R is free software and comes with ABSOLUTELY NO WARRANTY. 1048s You are welcome to redistribute it under certain conditions. 1048s Type 'license()' or 'licence()' for distribution details. 1048s 1048s R is a collaborative project with many contributors. 1048s Type 'contributors()' for more information and 1048s 'citation()' on how to cite R or R packages in publications. 1048s 1048s Type 'demo()' for some demos, 'help()' for on-line help, or 1048s 'help.start()' for an HTML browser interface to help. 1048s Type 'q()' to quit R. 1048s 1048s > library('msm') 1049s > 1049s > 1049s Other tests are currently unsupported! 1049s They will be progressively added. 1049s /tmp/autopkgtest.ByfMJs/wrapper.sh: checking for leaked background processes... 1049s /tmp/autopkgtest.ByfMJs/wrapper.sh: waiting for tee/cat subprocesses... 1049s /tmp/autopkgtest.ByfMJs/wrapper.sh: cleaning up... 1049s /tmp/autopkgtest.ByfMJs/wrapper.sh: Exit status: 0 1049s autopkgtest: DBG: testbed command exited with code 0 1049s autopkgtest [03:40:46]: test pkg-r-autopkgtest: -----------------------] 1049s autopkgtest: DBG: testbed executing test finished with exit status 0 1049s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.ByfMJs/pkg-r-autopkgtest-stdout /tmp/autopkgtest-work.52nut64i/out/pkg-r-autopkgtest-stdout 1049s autopkgtest: DBG: got reply from testbed: ok 1049s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.ByfMJs/pkg-r-autopkgtest-stderr /tmp/autopkgtest-work.52nut64i/out/pkg-r-autopkgtest-stderr 1049s autopkgtest: DBG: got reply from testbed: ok 1050s pkg-r-autopkgtest PASS 1050s autopkgtest [03:40:47]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 1050s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.ByfMJs/pkg-r-autopkgtest-artifacts/ /tmp/autopkgtest-work.52nut64i/out/artifacts/ 1050s autopkgtest: DBG: got reply from testbed: ok 1050s autopkgtest: DBG: testbed command ['rm', '-rf', '/tmp/autopkgtest.ByfMJs/pkg-r-autopkgtest-artifacts', '/tmp/autopkgtest.ByfMJs/autopkgtest_tmp'], kind short, sout raw, serr pipe, env [] 1050s autopkgtest: DBG: testbed command exited with code 0 1050s autopkgtest: DBG: needs_reset, previously=False, requested by run_tests() line 230 1050s autopkgtest [03:40:47]: @@@@@@@@@@@@@@@@@@@@ summary 1050s run-unit-test PASS 1050s pkg-r-autopkgtest PASS 1050s autopkgtest: DBG: testbed stop 1050s autopkgtest: DBG: testbed close, scratch=/tmp/autopkgtest.ByfMJs 1050s autopkgtest: DBG: sending command to testbed: close 1056s autopkgtest: DBG: got reply from testbed: ok 1056s autopkgtest: DBG: sending command to testbed: quit 1056s nova [W] Using flock in prodstack6-s390x 1056s Creating nova instance adt-plucky-s390x-r-cran-msm-20250204-032317-juju-7f2275-prod-proposed-migration-environment-15-da0b1dd2-22cc-4a09-b8b0-daf308baccc9 from image adt/ubuntu-plucky-s390x-server-20250203.img (UUID 247705cf-ad10-4dc6-8dfa-317dcfe4f398)... 1056s nova [W] Timed out waiting for 34828f1e-241b-46fe-8e35-12f95a7c4ebc to get deleted.