0s autopkgtest [18:07:01]: starting date and time: 2025-03-15 18:07:01+0000
  0s autopkgtest [18:07:01]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  0s autopkgtest [18:07:01]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.xqk_ekpu/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-isospecr --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-s390x-21.secgroup --name adt-plucky-s390x-r-cran-isospecr-20250315-180701-juju-7f2275-prod-proposed-migration-environment-20-5148ead6-fc2e-42f8-9420-5561b75d4428 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
109s autopkgtest [18:08:50]: testbed dpkg architecture: s390x
109s autopkgtest [18:08:50]: testbed apt version: 2.9.33
109s autopkgtest [18:08:50]: @@@@@@@@@@@@@@@@@@@@ test bed setup
109s autopkgtest [18:08:50]: testbed release detected to be: None
110s autopkgtest [18:08:51]: updating testbed package index (apt update)
110s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB]
110s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
111s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
111s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
111s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB]
111s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB]
111s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB]
111s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [113 kB]
111s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1824 B]
111s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B]
111s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [320 kB]
112s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [13.4 kB]
112s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3776 B]
112s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [240 B]
112s Fetched 1073 kB in 2s (637 kB/s)
112s Reading package lists...
113s Reading package lists...
113s Building dependency tree...
113s Reading state information...
113s Calculating upgrade...
113s Calculating upgrade...
113s The following packages were automatically installed and are no longer required:
113s   libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64
113s   linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic
113s   linux-modules-6.11.0-8-generic linux-tools-6.11.0-8
113s   linux-tools-6.11.0-8-generic
113s Use 'sudo apt autoremove' to remove them.
113s The following packages will be upgraded:
113s   pinentry-curses python3-jinja2 strace
113s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
113s Need to get 652 kB of archives.
113s After this operation, 27.6 kB of additional disk space will be used.
113s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB]
114s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x pinentry-curses s390x 1.3.1-2ubuntu3 [42.9 kB]
114s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB]
115s Fetched 652 kB in 1s (685 kB/s)
115s (Reading database ... 
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(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81428 files and directories currently installed.)
115s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ...
115s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ...
115s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_s390x.deb ...
115s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ...
115s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ...
115s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ...
115s Setting up pinentry-curses (1.3.1-2ubuntu3) ...
115s Setting up python3-jinja2 (3.1.5-2ubuntu1) ...
115s Setting up strace (6.13+ds-1ubuntu1) ...
115s Processing triggers for man-db (2.13.0-1) ...
115s Reading package lists...
116s Building dependency tree...
116s Reading state information...
116s Solving dependencies...
116s The following packages will be REMOVED:
116s   libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64*
116s   linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
116s   linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8*
116s   linux-tools-6.11.0-8-generic*
116s 0 upgraded, 0 newly installed, 9 to remove and 5 not upgraded.
116s After this operation, 167 MB disk space will be freed.
116s (Reading database ... 
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(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81428 files and directories currently installed.)
116s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
116s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
116s Removing libpython3.12t64:s390x (3.12.9-1) ...
116s Removing libpython3.12-stdlib:s390x (3.12.9-1) ...
116s Removing libnsl2:s390x (1.3.0-3build3) ...
116s Removing libpython3.12-minimal:s390x (3.12.9-1) ...
116s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
116s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
117s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
117s Processing triggers for libc-bin (2.41-1ubuntu1) ...
117s (Reading database ... 
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(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56328 files and directories currently installed.)
117s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ...
117s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
117s autopkgtest [18:08:58]: upgrading testbed (apt dist-upgrade and autopurge)
117s Reading package lists...
117s Building dependency tree...
117s Reading state information...
118s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
118s Starting 2 pkgProblemResolver with broken count: 0
118s Done
118s Entering ResolveByKeep
118s 
118s Calculating upgrade...
118s The following packages will be upgraded:
118s   libc-bin libc-dev-bin libc6 libc6-dev locales
118s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
118s Need to get 9512 kB of archives.
118s After this operation, 8192 B of additional disk space will be used.
118s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6-dev s390x 2.41-1ubuntu2 [1678 kB]
120s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-dev-bin s390x 2.41-1ubuntu2 [24.3 kB]
120s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6 s390x 2.41-1ubuntu2 [2892 kB]
123s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-bin s390x 2.41-1ubuntu2 [671 kB]
124s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x locales all 2.41-1ubuntu2 [4246 kB]
127s Preconfiguring packages ...
127s Fetched 9512 kB in 9s (1052 kB/s)
127s (Reading database ... 
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
127s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_s390x.deb ...
127s Unpacking libc6-dev:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
127s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_s390x.deb ...
127s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
127s Preparing to unpack .../libc6_2.41-1ubuntu2_s390x.deb ...
128s Unpacking libc6:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
128s Setting up libc6:s390x (2.41-1ubuntu2) ...
128s (Reading database ... 
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
128s Preparing to unpack .../libc-bin_2.41-1ubuntu2_s390x.deb ...
128s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
128s Setting up libc-bin (2.41-1ubuntu2) ...
128s (Reading database ... 
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(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
128s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ...
128s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
128s Setting up locales (2.41-1ubuntu2) ...
128s Generating locales (this might take a while)...
130s   en_US.UTF-8... done
130s Generation complete.
130s Setting up libc-dev-bin (2.41-1ubuntu2) ...
130s Setting up libc6-dev:s390x (2.41-1ubuntu2) ...
130s Processing triggers for man-db (2.13.0-1) ...
130s Processing triggers for systemd (257.3-1ubuntu3) ...
131s Reading package lists...
131s Building dependency tree...
131s Reading state information...
131s Starting pkgProblemResolver with broken count: 0
131s Starting 2 pkgProblemResolver with broken count: 0
131s Done
131s Solving dependencies...
131s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
131s autopkgtest [18:09:12]: rebooting testbed after setup commands that affected boot
149s autopkgtest [18:09:30]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP Wed Mar 12 14:53:49 UTC 2025
151s autopkgtest [18:09:32]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-isospecr
153s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-isospecr 2.1.3-1 (dsc) [2177 B]
153s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-isospecr 2.1.3-1 (tar) [366 kB]
153s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-isospecr 2.1.3-1 (diff) [3520 B]
153s gpgv: Signature made Fri Nov  6 10:31:42 2020 UTC
153s gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
153s gpgv:                issuer "tille@debian.org"
153s gpgv: Can't check signature: No public key
153s dpkg-source: warning: cannot verify inline signature for ./r-cran-isospecr_2.1.3-1.dsc: no acceptable signature found
153s autopkgtest [18:09:34]: testing package r-cran-isospecr version 2.1.3-1
154s autopkgtest [18:09:35]: build not needed
156s autopkgtest [18:09:37]: test run-unit-test: preparing testbed
156s Reading package lists...
156s Building dependency tree...
156s Reading state information...
156s Starting pkgProblemResolver with broken count: 0
156s Starting 2 pkgProblemResolver with broken count: 0
156s Done
156s The following NEW packages will be installed:
156s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3
156s   libcairo2 libdatrie1 libdeflate0 libfontconfig1 libfreetype6 libgfortran5
156s   libgomp1 libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8
156s   libjpeg8 liblapack3 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
156s   libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6
156s   libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0
156s   libxft2 libxrender1 libxss1 libxt6t64 littler r-base-core r-cran-brio
156s   r-cran-callr r-cran-cli r-cran-crayon r-cran-desc r-cran-diffobj
156s   r-cran-digest r-cran-evaluate r-cran-fs r-cran-glue r-cran-isospecr
156s   r-cran-jsonlite r-cran-lifecycle r-cran-littler r-cran-magrittr
156s   r-cran-pkgbuild r-cran-pkgkitten r-cran-pkgload r-cran-praise
156s   r-cran-processx r-cran-ps r-cran-r6 r-cran-rcpp r-cran-rlang
156s   r-cran-rprojroot r-cran-testthat r-cran-waldo r-cran-withr unzip x11-common
156s   xdg-utils zip
156s 0 upgraded, 73 newly installed, 0 to remove and 0 not upgraded.
156s Need to get 52.7 MB of archives.
156s After this operation, 108 MB of additional disk space will be used.
156s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB]
157s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB]
157s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB]
158s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-2ubuntu1 [37.5 kB]
158s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-2ubuntu1 [150 kB]
158s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig s390x 2.15.0-2ubuntu1 [191 kB]
158s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.1-2 [252 kB]
158s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB]
159s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB]
159s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B]
159s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB]
159s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB]
159s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB]
159s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.23-1 [46.1 kB]
159s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 15-20250222-0ubuntu1 [620 kB]
160s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 15-20250222-0ubuntu1 [152 kB]
160s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB]
160s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB]
160s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB]
160s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB]
160s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB]
161s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B]
161s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.1-2 [2971 kB]
163s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libthai-data all 0.1.29-2build1 [158 kB]
164s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB]
164s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x libpango-1.0-0 s390x 1.56.2-1 [253 kB]
164s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x libpangoft2-1.0-0 s390x 1.56.2-1 [50.2 kB]
164s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x libpangocairo-1.0-0 s390x 1.56.2-1 [28.2 kB]
164s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB]
164s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB]
164s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB]
164s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libsm6 s390x 2:1.2.4-1 [18.4 kB]
164s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB]
165s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB]
165s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB]
165s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB]
165s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB]
165s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B]
165s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.16-1 [830 kB]
166s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB]
166s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x zip s390x 3.0-14ubuntu2 [187 kB]
166s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x unzip s390x 6.0-28ubuntu6 [186 kB]
167s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
167s Get:44 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-core s390x 4.4.3-1 [28.6 MB]
195s Get:45 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-littler s390x 0.3.20-2 [95.0 kB]
195s Get:46 http://ftpmaster.internal/ubuntu plucky/universe s390x littler all 0.3.20-2 [2554 B]
195s Get:47 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-brio s390x 1.1.5-1 [38.6 kB]
195s Get:48 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ps s390x 1.9.0-1 [408 kB]
195s Get:49 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r6 all 2.6.1-1 [101 kB]
195s Get:50 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-processx s390x 3.8.6-1 [364 kB]
196s Get:51 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-callr all 3.7.6-1 [458 kB]
196s Get:52 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cli s390x 3.6.4-1 [1379 kB]
198s Get:53 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-crayon all 1.5.3-1 [165 kB]
198s Get:54 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-desc all 1.4.3-1 [359 kB]
198s Get:55 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-diffobj s390x 0.3.5-1 [1115 kB]
199s Get:56 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-digest s390x 0.6.37-1 [205 kB]
200s Get:57 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-evaluate all 1.0.3-1 [114 kB]
200s Get:58 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fs s390x 1.6.5+dfsg-1 [245 kB]
200s Get:59 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-glue s390x 1.8.0-1 [164 kB]
200s Get:60 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
200s Get:61 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcpp s390x 1.0.14-1 [2003 kB]
203s Get:62 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-isospecr s390x 2.1.3-1 [391 kB]
203s Get:63 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-jsonlite s390x 1.9.1+dfsg-1 [447 kB]
204s Get:64 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rlang s390x 1.1.5-1 [1713 kB]
206s Get:65 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
206s Get:66 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB]
206s Get:67 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgbuild all 1.4.6-1 [213 kB]
207s Get:68 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rprojroot all 2.0.4-2 [125 kB]
207s Get:69 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-withr all 3.0.2+dfsg-1 [214 kB]
207s Get:70 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgload all 1.4.0-1 [247 kB]
207s Get:71 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-praise all 1.0.0-4build1 [20.3 kB]
207s Get:72 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-waldo all 0.6.1-2 [150 kB]
207s Get:73 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-testthat s390x 3.2.3-1 [1641 kB]
210s Preconfiguring packages ...
210s Fetched 52.7 MB in 53s (994 kB/s)
210s Selecting previously unselected package libfreetype6:s390x.
210s (Reading database ... 
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210s Preparing to unpack .../00-libfreetype6_2.13.3+dfsg-1_s390x.deb ...
210s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ...
210s Selecting previously unselected package fonts-dejavu-mono.
210s Preparing to unpack .../01-fonts-dejavu-mono_2.37-8_all.deb ...
210s Unpacking fonts-dejavu-mono (2.37-8) ...
210s Selecting previously unselected package fonts-dejavu-core.
210s Preparing to unpack .../02-fonts-dejavu-core_2.37-8_all.deb ...
210s Unpacking fonts-dejavu-core (2.37-8) ...
210s Selecting previously unselected package fontconfig-config.
210s Preparing to unpack .../03-fontconfig-config_2.15.0-2ubuntu1_s390x.deb ...
210s Unpacking fontconfig-config (2.15.0-2ubuntu1) ...
210s Selecting previously unselected package libfontconfig1:s390x.
210s Preparing to unpack .../04-libfontconfig1_2.15.0-2ubuntu1_s390x.deb ...
210s Unpacking libfontconfig1:s390x (2.15.0-2ubuntu1) ...
210s Selecting previously unselected package fontconfig.
210s Preparing to unpack .../05-fontconfig_2.15.0-2ubuntu1_s390x.deb ...
210s Unpacking fontconfig (2.15.0-2ubuntu1) ...
210s Selecting previously unselected package libblas3:s390x.
210s Preparing to unpack .../06-libblas3_3.12.1-2_s390x.deb ...
210s Unpacking libblas3:s390x (3.12.1-2) ...
210s Selecting previously unselected package libpixman-1-0:s390x.
210s Preparing to unpack .../07-libpixman-1-0_0.44.0-3_s390x.deb ...
210s Unpacking libpixman-1-0:s390x (0.44.0-3) ...
210s Selecting previously unselected package libxcb-render0:s390x.
210s Preparing to unpack .../08-libxcb-render0_1.17.0-2_s390x.deb ...
210s Unpacking libxcb-render0:s390x (1.17.0-2) ...
210s Selecting previously unselected package libxcb-shm0:s390x.
210s Preparing to unpack .../09-libxcb-shm0_1.17.0-2_s390x.deb ...
210s Unpacking libxcb-shm0:s390x (1.17.0-2) ...
210s Selecting previously unselected package libxrender1:s390x.
210s Preparing to unpack .../10-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ...
210s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ...
210s Selecting previously unselected package libcairo2:s390x.
210s Preparing to unpack .../11-libcairo2_1.18.2-2_s390x.deb ...
210s Unpacking libcairo2:s390x (1.18.2-2) ...
210s Selecting previously unselected package libdatrie1:s390x.
210s Preparing to unpack .../12-libdatrie1_0.2.13-3build1_s390x.deb ...
210s Unpacking libdatrie1:s390x (0.2.13-3build1) ...
210s Selecting previously unselected package libdeflate0:s390x.
210s Preparing to unpack .../13-libdeflate0_1.23-1_s390x.deb ...
210s Unpacking libdeflate0:s390x (1.23-1) ...
210s Selecting previously unselected package libgfortran5:s390x.
210s Preparing to unpack .../14-libgfortran5_15-20250222-0ubuntu1_s390x.deb ...
210s Unpacking libgfortran5:s390x (15-20250222-0ubuntu1) ...
210s Selecting previously unselected package libgomp1:s390x.
210s Preparing to unpack .../15-libgomp1_15-20250222-0ubuntu1_s390x.deb ...
210s Unpacking libgomp1:s390x (15-20250222-0ubuntu1) ...
210s Selecting previously unselected package libgraphite2-3:s390x.
210s Preparing to unpack .../16-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ...
210s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
210s Selecting previously unselected package libharfbuzz0b:s390x.
210s Preparing to unpack .../17-libharfbuzz0b_10.2.0-1_s390x.deb ...
210s Unpacking libharfbuzz0b:s390x (10.2.0-1) ...
210s Selecting previously unselected package x11-common.
210s Preparing to unpack .../18-x11-common_1%3a7.7+23ubuntu3_all.deb ...
210s Unpacking x11-common (1:7.7+23ubuntu3) ...
210s Selecting previously unselected package libice6:s390x.
210s Preparing to unpack .../19-libice6_2%3a1.1.1-1_s390x.deb ...
210s Unpacking libice6:s390x (2:1.1.1-1) ...
210s Selecting previously unselected package libjpeg-turbo8:s390x.
210s Preparing to unpack .../20-libjpeg-turbo8_2.1.5-3ubuntu2_s390x.deb ...
210s Unpacking libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ...
210s Selecting previously unselected package libjpeg8:s390x.
210s Preparing to unpack .../21-libjpeg8_8c-2ubuntu11_s390x.deb ...
210s Unpacking libjpeg8:s390x (8c-2ubuntu11) ...
210s Selecting previously unselected package liblapack3:s390x.
210s Preparing to unpack .../22-liblapack3_3.12.1-2_s390x.deb ...
210s Unpacking liblapack3:s390x (3.12.1-2) ...
210s Selecting previously unselected package libthai-data.
210s Preparing to unpack .../23-libthai-data_0.1.29-2build1_all.deb ...
210s Unpacking libthai-data (0.1.29-2build1) ...
210s Selecting previously unselected package libthai0:s390x.
210s Preparing to unpack .../24-libthai0_0.1.29-2build1_s390x.deb ...
210s Unpacking libthai0:s390x (0.1.29-2build1) ...
210s Selecting previously unselected package libpango-1.0-0:s390x.
210s Preparing to unpack .../25-libpango-1.0-0_1.56.2-1_s390x.deb ...
210s Unpacking libpango-1.0-0:s390x (1.56.2-1) ...
210s Selecting previously unselected package libpangoft2-1.0-0:s390x.
210s Preparing to unpack .../26-libpangoft2-1.0-0_1.56.2-1_s390x.deb ...
210s Unpacking libpangoft2-1.0-0:s390x (1.56.2-1) ...
210s Selecting previously unselected package libpangocairo-1.0-0:s390x.
210s Preparing to unpack .../27-libpangocairo-1.0-0_1.56.2-1_s390x.deb ...
210s Unpacking libpangocairo-1.0-0:s390x (1.56.2-1) ...
210s Selecting previously unselected package libpaper2:s390x.
210s Preparing to unpack .../28-libpaper2_2.2.5-0.3_s390x.deb ...
210s Unpacking libpaper2:s390x (2.2.5-0.3) ...
210s Selecting previously unselected package libpaper-utils.
210s Preparing to unpack .../29-libpaper-utils_2.2.5-0.3_s390x.deb ...
210s Unpacking libpaper-utils (2.2.5-0.3) ...
210s Selecting previously unselected package libsharpyuv0:s390x.
210s Preparing to unpack .../30-libsharpyuv0_1.5.0-0.1_s390x.deb ...
210s Unpacking libsharpyuv0:s390x (1.5.0-0.1) ...
210s Selecting previously unselected package libsm6:s390x.
210s Preparing to unpack .../31-libsm6_2%3a1.2.4-1_s390x.deb ...
210s Unpacking libsm6:s390x (2:1.2.4-1) ...
210s Selecting previously unselected package libtcl8.6:s390x.
210s Preparing to unpack .../32-libtcl8.6_8.6.16+dfsg-1_s390x.deb ...
210s Unpacking libtcl8.6:s390x (8.6.16+dfsg-1) ...
210s Selecting previously unselected package libjbig0:s390x.
210s Preparing to unpack .../33-libjbig0_2.1-6.1ubuntu2_s390x.deb ...
210s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ...
210s Selecting previously unselected package libwebp7:s390x.
210s Preparing to unpack .../34-libwebp7_1.5.0-0.1_s390x.deb ...
210s Unpacking libwebp7:s390x (1.5.0-0.1) ...
210s Selecting previously unselected package libtiff6:s390x.
210s Preparing to unpack .../35-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ...
210s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ...
210s Selecting previously unselected package libxft2:s390x.
210s Preparing to unpack .../36-libxft2_2.3.6-1build1_s390x.deb ...
210s Unpacking libxft2:s390x (2.3.6-1build1) ...
210s Selecting previously unselected package libxss1:s390x.
210s Preparing to unpack .../37-libxss1_1%3a1.2.3-1build3_s390x.deb ...
210s Unpacking libxss1:s390x (1:1.2.3-1build3) ...
210s Selecting previously unselected package libtk8.6:s390x.
210s Preparing to unpack .../38-libtk8.6_8.6.16-1_s390x.deb ...
210s Unpacking libtk8.6:s390x (8.6.16-1) ...
210s Selecting previously unselected package libxt6t64:s390x.
210s Preparing to unpack .../39-libxt6t64_1%3a1.2.1-1.2build1_s390x.deb ...
210s Unpacking libxt6t64:s390x (1:1.2.1-1.2build1) ...
210s Selecting previously unselected package zip.
210s Preparing to unpack .../40-zip_3.0-14ubuntu2_s390x.deb ...
210s Unpacking zip (3.0-14ubuntu2) ...
210s Selecting previously unselected package unzip.
210s Preparing to unpack .../41-unzip_6.0-28ubuntu6_s390x.deb ...
210s Unpacking unzip (6.0-28ubuntu6) ...
210s Selecting previously unselected package xdg-utils.
210s Preparing to unpack .../42-xdg-utils_1.2.1-2ubuntu1_all.deb ...
210s Unpacking xdg-utils (1.2.1-2ubuntu1) ...
210s Selecting previously unselected package r-base-core.
210s Preparing to unpack .../43-r-base-core_4.4.3-1_s390x.deb ...
210s Unpacking r-base-core (4.4.3-1) ...
211s Selecting previously unselected package r-cran-littler.
211s Preparing to unpack .../44-r-cran-littler_0.3.20-2_s390x.deb ...
211s Unpacking r-cran-littler (0.3.20-2) ...
211s Selecting previously unselected package littler.
211s Preparing to unpack .../45-littler_0.3.20-2_all.deb ...
211s Unpacking littler (0.3.20-2) ...
211s Selecting previously unselected package r-cran-brio.
211s Preparing to unpack .../46-r-cran-brio_1.1.5-1_s390x.deb ...
211s Unpacking r-cran-brio (1.1.5-1) ...
211s Selecting previously unselected package r-cran-ps.
211s Preparing to unpack .../47-r-cran-ps_1.9.0-1_s390x.deb ...
211s Unpacking r-cran-ps (1.9.0-1) ...
211s Selecting previously unselected package r-cran-r6.
211s Preparing to unpack .../48-r-cran-r6_2.6.1-1_all.deb ...
211s Unpacking r-cran-r6 (2.6.1-1) ...
211s Selecting previously unselected package r-cran-processx.
211s Preparing to unpack .../49-r-cran-processx_3.8.6-1_s390x.deb ...
211s Unpacking r-cran-processx (3.8.6-1) ...
211s Selecting previously unselected package r-cran-callr.
211s Preparing to unpack .../50-r-cran-callr_3.7.6-1_all.deb ...
211s Unpacking r-cran-callr (3.7.6-1) ...
211s Selecting previously unselected package r-cran-cli.
211s Preparing to unpack .../51-r-cran-cli_3.6.4-1_s390x.deb ...
211s Unpacking r-cran-cli (3.6.4-1) ...
211s Selecting previously unselected package r-cran-crayon.
211s Preparing to unpack .../52-r-cran-crayon_1.5.3-1_all.deb ...
211s Unpacking r-cran-crayon (1.5.3-1) ...
211s Selecting previously unselected package r-cran-desc.
211s Preparing to unpack .../53-r-cran-desc_1.4.3-1_all.deb ...
211s Unpacking r-cran-desc (1.4.3-1) ...
211s Selecting previously unselected package r-cran-diffobj.
211s Preparing to unpack .../54-r-cran-diffobj_0.3.5-1_s390x.deb ...
211s Unpacking r-cran-diffobj (0.3.5-1) ...
211s Selecting previously unselected package r-cran-digest.
211s Preparing to unpack .../55-r-cran-digest_0.6.37-1_s390x.deb ...
211s Unpacking r-cran-digest (0.6.37-1) ...
211s Selecting previously unselected package r-cran-evaluate.
211s Preparing to unpack .../56-r-cran-evaluate_1.0.3-1_all.deb ...
211s Unpacking r-cran-evaluate (1.0.3-1) ...
211s Selecting previously unselected package r-cran-fs.
211s Preparing to unpack .../57-r-cran-fs_1.6.5+dfsg-1_s390x.deb ...
211s Unpacking r-cran-fs (1.6.5+dfsg-1) ...
211s Selecting previously unselected package r-cran-glue.
211s Preparing to unpack .../58-r-cran-glue_1.8.0-1_s390x.deb ...
211s Unpacking r-cran-glue (1.8.0-1) ...
211s Selecting previously unselected package r-cran-pkgkitten.
211s Preparing to unpack .../59-r-cran-pkgkitten_0.2.4-1_all.deb ...
211s Unpacking r-cran-pkgkitten (0.2.4-1) ...
211s Selecting previously unselected package r-cran-rcpp.
211s Preparing to unpack .../60-r-cran-rcpp_1.0.14-1_s390x.deb ...
211s Unpacking r-cran-rcpp (1.0.14-1) ...
211s Selecting previously unselected package r-cran-isospecr.
211s Preparing to unpack .../61-r-cran-isospecr_2.1.3-1_s390x.deb ...
211s Unpacking r-cran-isospecr (2.1.3-1) ...
211s Selecting previously unselected package r-cran-jsonlite.
211s Preparing to unpack .../62-r-cran-jsonlite_1.9.1+dfsg-1_s390x.deb ...
211s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ...
211s Selecting previously unselected package r-cran-rlang.
211s Preparing to unpack .../63-r-cran-rlang_1.1.5-1_s390x.deb ...
211s Unpacking r-cran-rlang (1.1.5-1) ...
211s Selecting previously unselected package r-cran-lifecycle.
211s Preparing to unpack .../64-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ...
211s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ...
211s Selecting previously unselected package r-cran-magrittr.
211s Preparing to unpack .../65-r-cran-magrittr_2.0.3-1_s390x.deb ...
211s Unpacking r-cran-magrittr (2.0.3-1) ...
211s Selecting previously unselected package r-cran-pkgbuild.
211s Preparing to unpack .../66-r-cran-pkgbuild_1.4.6-1_all.deb ...
211s Unpacking r-cran-pkgbuild (1.4.6-1) ...
211s Selecting previously unselected package r-cran-rprojroot.
211s Preparing to unpack .../67-r-cran-rprojroot_2.0.4-2_all.deb ...
211s Unpacking r-cran-rprojroot (2.0.4-2) ...
211s Selecting previously unselected package r-cran-withr.
211s Preparing to unpack .../68-r-cran-withr_3.0.2+dfsg-1_all.deb ...
211s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
211s Selecting previously unselected package r-cran-pkgload.
211s Preparing to unpack .../69-r-cran-pkgload_1.4.0-1_all.deb ...
211s Unpacking r-cran-pkgload (1.4.0-1) ...
211s Selecting previously unselected package r-cran-praise.
211s Preparing to unpack .../70-r-cran-praise_1.0.0-4build1_all.deb ...
211s Unpacking r-cran-praise (1.0.0-4build1) ...
211s Selecting previously unselected package r-cran-waldo.
211s Preparing to unpack .../71-r-cran-waldo_0.6.1-2_all.deb ...
211s Unpacking r-cran-waldo (0.6.1-2) ...
211s Selecting previously unselected package r-cran-testthat.
211s Preparing to unpack .../72-r-cran-testthat_3.2.3-1_s390x.deb ...
211s Unpacking r-cran-testthat (3.2.3-1) ...
211s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
211s Setting up libpixman-1-0:s390x (0.44.0-3) ...
211s Setting up libsharpyuv0:s390x (1.5.0-0.1) ...
211s Setting up libxrender1:s390x (1:0.9.10-1.1build1) ...
211s Setting up libdatrie1:s390x (0.2.13-3build1) ...
211s Setting up libxcb-render0:s390x (1.17.0-2) ...
211s Setting up unzip (6.0-28ubuntu6) ...
211s Setting up x11-common (1:7.7+23ubuntu3) ...
211s Setting up libdeflate0:s390x (1.23-1) ...
211s Setting up libxcb-shm0:s390x (1.17.0-2) ...
211s Setting up libgomp1:s390x (15-20250222-0ubuntu1) ...
211s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ...
211s Setting up zip (3.0-14ubuntu2) ...
211s Setting up libblas3:s390x (3.12.1-2) ...
211s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
211s Setting up libfreetype6:s390x (2.13.3+dfsg-1) ...
211s Setting up fonts-dejavu-mono (2.37-8) ...
211s Setting up libtcl8.6:s390x (8.6.16+dfsg-1) ...
211s Setting up fonts-dejavu-core (2.37-8) ...
211s Setting up libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ...
211s Setting up libgfortran5:s390x (15-20250222-0ubuntu1) ...
211s Setting up libwebp7:s390x (1.5.0-0.1) ...
211s Setting up libharfbuzz0b:s390x (10.2.0-1) ...
211s Setting up libthai-data (0.1.29-2build1) ...
211s Setting up libxss1:s390x (1:1.2.3-1build3) ...
212s Setting up libpaper2:s390x (2.2.5-0.3) ...
212s Setting up xdg-utils (1.2.1-2ubuntu1) ...
212s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
212s Setting up libjpeg8:s390x (8c-2ubuntu11) ...
212s Setting up libice6:s390x (2:1.1.1-1) ...
212s Setting up liblapack3:s390x (3.12.1-2) ...
212s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
212s Setting up fontconfig-config (2.15.0-2ubuntu1) ...
212s Setting up libpaper-utils (2.2.5-0.3) ...
212s Setting up libthai0:s390x (0.1.29-2build1) ...
212s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu4) ...
212s Setting up libfontconfig1:s390x (2.15.0-2ubuntu1) ...
212s Setting up libsm6:s390x (2:1.2.4-1) ...
212s Setting up fontconfig (2.15.0-2ubuntu1) ...
214s Regenerating fonts cache... done.
214s Setting up libxft2:s390x (2.3.6-1build1) ...
214s Setting up libtk8.6:s390x (8.6.16-1) ...
214s Setting up libpango-1.0-0:s390x (1.56.2-1) ...
214s Setting up libcairo2:s390x (1.18.2-2) ...
214s Setting up libxt6t64:s390x (1:1.2.1-1.2build1) ...
214s Setting up libpangoft2-1.0-0:s390x (1.56.2-1) ...
214s Setting up libpangocairo-1.0-0:s390x (1.56.2-1) ...
214s Setting up r-base-core (4.4.3-1) ...
214s Creating config file /etc/R/Renviron with new version
214s Setting up r-cran-crayon (1.5.3-1) ...
214s Setting up r-cran-ps (1.9.0-1) ...
214s Setting up r-cran-r6 (2.6.1-1) ...
214s Setting up r-cran-pkgkitten (0.2.4-1) ...
214s Setting up r-cran-magrittr (2.0.3-1) ...
214s Setting up r-cran-littler (0.3.20-2) ...
214s Setting up r-cran-fs (1.6.5+dfsg-1) ...
214s Setting up r-cran-rcpp (1.0.14-1) ...
214s Setting up r-cran-brio (1.1.5-1) ...
214s Setting up r-cran-diffobj (0.3.5-1) ...
214s Setting up r-cran-rlang (1.1.5-1) ...
214s Setting up r-cran-isospecr (2.1.3-1) ...
214s Setting up littler (0.3.20-2) ...
214s Setting up r-cran-withr (3.0.2+dfsg-1) ...
214s Setting up r-cran-processx (3.8.6-1) ...
214s Setting up r-cran-praise (1.0.0-4build1) ...
214s Setting up r-cran-digest (0.6.37-1) ...
214s Setting up r-cran-evaluate (1.0.3-1) ...
214s Setting up r-cran-glue (1.8.0-1) ...
214s Setting up r-cran-cli (3.6.4-1) ...
214s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
214s Setting up r-cran-rprojroot (2.0.4-2) ...
214s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ...
214s Setting up r-cran-waldo (0.6.1-2) ...
214s Setting up r-cran-callr (3.7.6-1) ...
214s Setting up r-cran-desc (1.4.3-1) ...
214s Setting up r-cran-pkgbuild (1.4.6-1) ...
214s Setting up r-cran-pkgload (1.4.0-1) ...
214s Setting up r-cran-testthat (3.2.3-1) ...
214s Processing triggers for libc-bin (2.41-1ubuntu2) ...
214s Processing triggers for man-db (2.13.0-1) ...
215s Processing triggers for install-info (7.1.1-1) ...
216s autopkgtest [18:10:37]: test run-unit-test: [-----------------------
216s BEGIN TEST testthat.R
216s 
216s R version 4.4.3 (2025-02-28) -- "Trophy Case"
216s Copyright (C) 2025 The R Foundation for Statistical Computing
216s Platform: s390x-ibm-linux-gnu
216s 
216s R is free software and comes with ABSOLUTELY NO WARRANTY.
216s You are welcome to redistribute it under certain conditions.
216s Type 'license()' or 'licence()' for distribution details.
216s 
216s R is a collaborative project with many contributors.
216s Type 'contributors()' for more information and
216s 'citation()' on how to cite R or R packages in publications.
216s 
216s Type 'demo()' for some demos, 'help()' for on-line help, or
216s 'help.start()' for an HTML browser interface to help.
216s Type 'q()' to quit R.
216s 
216s > library(testthat)
216s > library(IsoSpecR)
216s > 
216s > test_check("IsoSpecR")
216s [ FAIL 0 | WARN 0 | SKIP 0 | PASS 0 ]
216s > 
216s autopkgtest [18:10:37]: test run-unit-test: -----------------------]
217s autopkgtest [18:10:38]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
217s run-unit-test        PASS
217s autopkgtest [18:10:38]: test pkg-r-autopkgtest: preparing testbed
217s Reading package lists...
217s Building dependency tree...
217s Reading state information...
218s Starting pkgProblemResolver with broken count: 0
218s Starting 2 pkgProblemResolver with broken count: 0
218s Done
218s The following NEW packages will be installed:
218s   build-essential cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu
218s   dctrl-tools g++ g++-14 g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14
218s   gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-14
218s   gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools libasan8
218s   libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev
218s   libgfortran-14-dev libicu-dev libisl23 libitm1 libjpeg-dev
218s   libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblzma-dev libmpc3
218s   libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
218s   libpkgconf3 libpng-dev libreadline-dev libstdc++-14-dev libtirpc-dev
218s   libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev zlib1g-dev
218s 0 upgraded, 51 newly installed, 0 to remove and 0 not upgraded.
218s Need to get 82.3 MB of archives.
218s After this operation, 279 MB of additional disk space will be used.
218s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libisl23 s390x 0.27-1 [704 kB]
219s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB]
219s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [9572 kB]
231s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14 s390x 14.2.0-17ubuntu3 [1028 B]
231s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [5556 B]
231s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x cpp s390x 4:14.2.0-1ubuntu1 [22.4 kB]
231s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libcc1-0 s390x 15-20250222-0ubuntu1 [49.2 kB]
231s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libitm1 s390x 15-20250222-0ubuntu1 [31.2 kB]
231s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libasan8 s390x 15-20250222-0ubuntu1 [2970 kB]
235s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libubsan1 s390x 15-20250222-0ubuntu1 [1212 kB]
237s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-14-dev s390x 14.2.0-17ubuntu3 [1037 kB]
238s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [18.7 MB]
258s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14 s390x 14.2.0-17ubuntu3 [526 kB]
259s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1204 B]
259s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x gcc s390x 4:14.2.0-1ubuntu1 [5004 B]
259s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++-14-dev s390x 14.2.0-17ubuntu3 [2611 kB]
262s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [11.0 MB]
273s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14 s390x 14.2.0-17ubuntu3 [21.8 kB]
273s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x g++-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [956 B]
273s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x g++ s390x 4:14.2.0-1ubuntu1 [1080 B]
273s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x build-essential s390x 12.10ubuntu1 [4930 B]
273s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x dctrl-tools s390x 2.24-3build3 [106 kB]
273s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran-14-dev s390x 14.2.0-17ubuntu3 [654 kB]
274s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [10.3 MB]
285s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14 s390x 14.2.0-17ubuntu3 [13.6 kB]
285s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1012 B]
285s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran s390x 4:14.2.0-1ubuntu1 [1160 B]
285s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x icu-devtools s390x 76.1-1ubuntu2 [225 kB]
285s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x libblas-dev s390x 3.12.1-2 [254 kB]
286s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libbz2-dev s390x 1.0.8-6 [39.1 kB]
286s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate-dev s390x 1.23-1 [52.2 kB]
286s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libicu-dev s390x 76.1-1ubuntu2 [12.2 MB]
299s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8-dev s390x 2.1.5-3ubuntu2 [281 kB]
299s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B]
299s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B]
300s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack-dev s390x 3.12.1-2 [5967 kB]
306s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libncurses-dev s390x 6.5+20250216-2 [407 kB]
306s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-16-0 s390x 10.45-1 [259 kB]
306s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-32-0 s390x 10.45-1 [245 kB]
307s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-posix3 s390x 10.45-1 [7080 B]
307s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-dev s390x 10.45-1 [899 kB]
308s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libpkgconf3 s390x 1.8.1-4 [31.2 kB]
308s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB]
309s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x libpng-dev s390x 1.6.47-1 [278 kB]
309s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libreadline-dev s390x 8.2-6 [187 kB]
309s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x liblzma-dev s390x 5.6.4-1 [183 kB]
310s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf-bin s390x 1.8.1-4 [21.5 kB]
310s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf s390x 1.8.1-4 [16.7 kB]
310s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x libtirpc-dev s390x 1.3.4+ds-1.3 [196 kB]
310s Get:50 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-dev all 4.4.3-1 [4176 B]
310s Get:51 http://ftpmaster.internal/ubuntu plucky/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
310s Fetched 82.3 MB in 1min 32s (892 kB/s)
310s Selecting previously unselected package libisl23:s390x.
310s (Reading database ... 
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(Reading database ... 62164 files and directories currently installed.)
310s Preparing to unpack .../00-libisl23_0.27-1_s390x.deb ...
310s Unpacking libisl23:s390x (0.27-1) ...
310s Selecting previously unselected package libmpc3:s390x.
310s Preparing to unpack .../01-libmpc3_1.3.1-1build2_s390x.deb ...
310s Unpacking libmpc3:s390x (1.3.1-1build2) ...
310s Selecting previously unselected package cpp-14-s390x-linux-gnu.
310s Preparing to unpack .../02-cpp-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
310s Unpacking cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
311s Selecting previously unselected package cpp-14.
311s Preparing to unpack .../03-cpp-14_14.2.0-17ubuntu3_s390x.deb ...
311s Unpacking cpp-14 (14.2.0-17ubuntu3) ...
311s Selecting previously unselected package cpp-s390x-linux-gnu.
311s Preparing to unpack .../04-cpp-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
311s Unpacking cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
311s Selecting previously unselected package cpp.
311s Preparing to unpack .../05-cpp_4%3a14.2.0-1ubuntu1_s390x.deb ...
311s Unpacking cpp (4:14.2.0-1ubuntu1) ...
311s Selecting previously unselected package libcc1-0:s390x.
311s Preparing to unpack .../06-libcc1-0_15-20250222-0ubuntu1_s390x.deb ...
311s Unpacking libcc1-0:s390x (15-20250222-0ubuntu1) ...
311s Selecting previously unselected package libitm1:s390x.
311s Preparing to unpack .../07-libitm1_15-20250222-0ubuntu1_s390x.deb ...
311s Unpacking libitm1:s390x (15-20250222-0ubuntu1) ...
311s Selecting previously unselected package libasan8:s390x.
311s Preparing to unpack .../08-libasan8_15-20250222-0ubuntu1_s390x.deb ...
311s Unpacking libasan8:s390x (15-20250222-0ubuntu1) ...
311s Selecting previously unselected package libubsan1:s390x.
311s Preparing to unpack .../09-libubsan1_15-20250222-0ubuntu1_s390x.deb ...
311s Unpacking libubsan1:s390x (15-20250222-0ubuntu1) ...
311s Selecting previously unselected package libgcc-14-dev:s390x.
311s Preparing to unpack .../10-libgcc-14-dev_14.2.0-17ubuntu3_s390x.deb ...
311s Unpacking libgcc-14-dev:s390x (14.2.0-17ubuntu3) ...
311s Selecting previously unselected package gcc-14-s390x-linux-gnu.
311s Preparing to unpack .../11-gcc-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
311s Unpacking gcc-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
311s Selecting previously unselected package gcc-14.
311s Preparing to unpack .../12-gcc-14_14.2.0-17ubuntu3_s390x.deb ...
311s Unpacking gcc-14 (14.2.0-17ubuntu3) ...
311s Selecting previously unselected package gcc-s390x-linux-gnu.
311s Preparing to unpack .../13-gcc-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
311s Unpacking gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
311s Selecting previously unselected package gcc.
311s Preparing to unpack .../14-gcc_4%3a14.2.0-1ubuntu1_s390x.deb ...
311s Unpacking gcc (4:14.2.0-1ubuntu1) ...
311s Selecting previously unselected package libstdc++-14-dev:s390x.
311s Preparing to unpack .../15-libstdc++-14-dev_14.2.0-17ubuntu3_s390x.deb ...
311s Unpacking libstdc++-14-dev:s390x (14.2.0-17ubuntu3) ...
311s Selecting previously unselected package g++-14-s390x-linux-gnu.
311s Preparing to unpack .../16-g++-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
311s Unpacking g++-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
311s Selecting previously unselected package g++-14.
311s Preparing to unpack .../17-g++-14_14.2.0-17ubuntu3_s390x.deb ...
311s Unpacking g++-14 (14.2.0-17ubuntu3) ...
311s Selecting previously unselected package g++-s390x-linux-gnu.
311s Preparing to unpack .../18-g++-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
311s Unpacking g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
311s Selecting previously unselected package g++.
311s Preparing to unpack .../19-g++_4%3a14.2.0-1ubuntu1_s390x.deb ...
311s Unpacking g++ (4:14.2.0-1ubuntu1) ...
311s Selecting previously unselected package build-essential.
311s Preparing to unpack .../20-build-essential_12.10ubuntu1_s390x.deb ...
311s Unpacking build-essential (12.10ubuntu1) ...
311s Selecting previously unselected package dctrl-tools.
311s Preparing to unpack .../21-dctrl-tools_2.24-3build3_s390x.deb ...
311s Unpacking dctrl-tools (2.24-3build3) ...
311s Selecting previously unselected package libgfortran-14-dev:s390x.
311s Preparing to unpack .../22-libgfortran-14-dev_14.2.0-17ubuntu3_s390x.deb ...
311s Unpacking libgfortran-14-dev:s390x (14.2.0-17ubuntu3) ...
311s Selecting previously unselected package gfortran-14-s390x-linux-gnu.
311s Preparing to unpack .../23-gfortran-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
311s Unpacking gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
311s Selecting previously unselected package gfortran-14.
311s Preparing to unpack .../24-gfortran-14_14.2.0-17ubuntu3_s390x.deb ...
311s Unpacking gfortran-14 (14.2.0-17ubuntu3) ...
311s Selecting previously unselected package gfortran-s390x-linux-gnu.
311s Preparing to unpack .../25-gfortran-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
311s Unpacking gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
311s Selecting previously unselected package gfortran.
311s Preparing to unpack .../26-gfortran_4%3a14.2.0-1ubuntu1_s390x.deb ...
311s Unpacking gfortran (4:14.2.0-1ubuntu1) ...
311s Selecting previously unselected package icu-devtools.
311s Preparing to unpack .../27-icu-devtools_76.1-1ubuntu2_s390x.deb ...
311s Unpacking icu-devtools (76.1-1ubuntu2) ...
311s Selecting previously unselected package libblas-dev:s390x.
311s Preparing to unpack .../28-libblas-dev_3.12.1-2_s390x.deb ...
311s Unpacking libblas-dev:s390x (3.12.1-2) ...
312s Selecting previously unselected package libbz2-dev:s390x.
312s Preparing to unpack .../29-libbz2-dev_1.0.8-6_s390x.deb ...
312s Unpacking libbz2-dev:s390x (1.0.8-6) ...
312s Selecting previously unselected package libdeflate-dev:s390x.
312s Preparing to unpack .../30-libdeflate-dev_1.23-1_s390x.deb ...
312s Unpacking libdeflate-dev:s390x (1.23-1) ...
312s Selecting previously unselected package libicu-dev:s390x.
312s Preparing to unpack .../31-libicu-dev_76.1-1ubuntu2_s390x.deb ...
312s Unpacking libicu-dev:s390x (76.1-1ubuntu2) ...
312s Selecting previously unselected package libjpeg-turbo8-dev:s390x.
312s Preparing to unpack .../32-libjpeg-turbo8-dev_2.1.5-3ubuntu2_s390x.deb ...
312s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ...
312s Selecting previously unselected package libjpeg8-dev:s390x.
312s Preparing to unpack .../33-libjpeg8-dev_8c-2ubuntu11_s390x.deb ...
312s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ...
312s Selecting previously unselected package libjpeg-dev:s390x.
312s Preparing to unpack .../34-libjpeg-dev_8c-2ubuntu11_s390x.deb ...
312s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ...
312s Selecting previously unselected package liblapack-dev:s390x.
312s Preparing to unpack .../35-liblapack-dev_3.12.1-2_s390x.deb ...
312s Unpacking liblapack-dev:s390x (3.12.1-2) ...
312s Selecting previously unselected package libncurses-dev:s390x.
312s Preparing to unpack .../36-libncurses-dev_6.5+20250216-2_s390x.deb ...
312s Unpacking libncurses-dev:s390x (6.5+20250216-2) ...
312s Selecting previously unselected package libpcre2-16-0:s390x.
312s Preparing to unpack .../37-libpcre2-16-0_10.45-1_s390x.deb ...
312s Unpacking libpcre2-16-0:s390x (10.45-1) ...
312s Selecting previously unselected package libpcre2-32-0:s390x.
312s Preparing to unpack .../38-libpcre2-32-0_10.45-1_s390x.deb ...
312s Unpacking libpcre2-32-0:s390x (10.45-1) ...
312s Selecting previously unselected package libpcre2-posix3:s390x.
312s Preparing to unpack .../39-libpcre2-posix3_10.45-1_s390x.deb ...
312s Unpacking libpcre2-posix3:s390x (10.45-1) ...
312s Selecting previously unselected package libpcre2-dev:s390x.
312s Preparing to unpack .../40-libpcre2-dev_10.45-1_s390x.deb ...
312s Unpacking libpcre2-dev:s390x (10.45-1) ...
312s Selecting previously unselected package libpkgconf3:s390x.
312s Preparing to unpack .../41-libpkgconf3_1.8.1-4_s390x.deb ...
312s Unpacking libpkgconf3:s390x (1.8.1-4) ...
312s Selecting previously unselected package zlib1g-dev:s390x.
312s Preparing to unpack .../42-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_s390x.deb ...
312s Unpacking zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
312s Selecting previously unselected package libpng-dev:s390x.
312s Preparing to unpack .../43-libpng-dev_1.6.47-1_s390x.deb ...
312s Unpacking libpng-dev:s390x (1.6.47-1) ...
312s Selecting previously unselected package libreadline-dev:s390x.
312s Preparing to unpack .../44-libreadline-dev_8.2-6_s390x.deb ...
312s Unpacking libreadline-dev:s390x (8.2-6) ...
312s Selecting previously unselected package liblzma-dev:s390x.
312s Preparing to unpack .../45-liblzma-dev_5.6.4-1_s390x.deb ...
312s Unpacking liblzma-dev:s390x (5.6.4-1) ...
312s Selecting previously unselected package pkgconf-bin.
312s Preparing to unpack .../46-pkgconf-bin_1.8.1-4_s390x.deb ...
312s Unpacking pkgconf-bin (1.8.1-4) ...
312s Selecting previously unselected package pkgconf:s390x.
312s Preparing to unpack .../47-pkgconf_1.8.1-4_s390x.deb ...
312s Unpacking pkgconf:s390x (1.8.1-4) ...
312s Selecting previously unselected package libtirpc-dev:s390x.
312s Preparing to unpack .../48-libtirpc-dev_1.3.4+ds-1.3_s390x.deb ...
312s Unpacking libtirpc-dev:s390x (1.3.4+ds-1.3) ...
312s Selecting previously unselected package r-base-dev.
312s Preparing to unpack .../49-r-base-dev_4.4.3-1_all.deb ...
312s Unpacking r-base-dev (4.4.3-1) ...
312s Selecting previously unselected package pkg-r-autopkgtest.
312s Preparing to unpack .../50-pkg-r-autopkgtest_20231212ubuntu1_all.deb ...
312s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ...
312s Setting up libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ...
312s Setting up libncurses-dev:s390x (6.5+20250216-2) ...
312s Setting up libreadline-dev:s390x (8.2-6) ...
312s Setting up libpcre2-16-0:s390x (10.45-1) ...
312s Setting up libpcre2-32-0:s390x (10.45-1) ...
312s Setting up libtirpc-dev:s390x (1.3.4+ds-1.3) ...
312s Setting up libpkgconf3:s390x (1.8.1-4) ...
312s Setting up libmpc3:s390x (1.3.1-1build2) ...
312s Setting up icu-devtools (76.1-1ubuntu2) ...
312s Setting up pkgconf-bin (1.8.1-4) ...
312s Setting up liblzma-dev:s390x (5.6.4-1) ...
312s Setting up libubsan1:s390x (15-20250222-0ubuntu1) ...
312s Setting up zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
312s Setting up libpcre2-posix3:s390x (10.45-1) ...
312s Setting up libasan8:s390x (15-20250222-0ubuntu1) ...
312s Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ...
312s Setting up libisl23:s390x (0.27-1) ...
312s Setting up libdeflate-dev:s390x (1.23-1) ...
312s Setting up libicu-dev:s390x (76.1-1ubuntu2) ...
312s Setting up libcc1-0:s390x (15-20250222-0ubuntu1) ...
312s Setting up libblas-dev:s390x (3.12.1-2) ...
312s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so to provide /usr/lib/s390x-linux-gnu/libblas.so (libblas.so-s390x-linux-gnu) in auto mode
312s Setting up dctrl-tools (2.24-3build3) ...
312s Setting up libitm1:s390x (15-20250222-0ubuntu1) ...
312s Setting up libbz2-dev:s390x (1.0.8-6) ...
312s Setting up libpcre2-dev:s390x (10.45-1) ...
312s Setting up libpng-dev:s390x (1.6.47-1) ...
312s Setting up libjpeg-dev:s390x (8c-2ubuntu11) ...
312s Setting up pkgconf:s390x (1.8.1-4) ...
312s Setting up liblapack-dev:s390x (3.12.1-2) ...
312s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode
312s Setting up cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
312s Setting up cpp-14 (14.2.0-17ubuntu3) ...
312s Setting up libgcc-14-dev:s390x (14.2.0-17ubuntu3) ...
312s Setting up libstdc++-14-dev:s390x (14.2.0-17ubuntu3) ...
312s Setting up libgfortran-14-dev:s390x (14.2.0-17ubuntu3) ...
312s Setting up cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
312s Setting up gcc-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
312s Setting up gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
312s Setting up g++-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
312s Setting up cpp (4:14.2.0-1ubuntu1) ...
312s Setting up gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
312s Setting up g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
312s Setting up gcc-14 (14.2.0-17ubuntu3) ...
312s Setting up g++-14 (14.2.0-17ubuntu3) ...
312s Setting up gfortran-14 (14.2.0-17ubuntu3) ...
312s Setting up gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
312s Setting up gcc (4:14.2.0-1ubuntu1) ...
312s Setting up g++ (4:14.2.0-1ubuntu1) ...
312s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
312s Setting up build-essential (12.10ubuntu1) ...
312s Setting up gfortran (4:14.2.0-1ubuntu1) ...
312s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
312s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
312s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
312s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
312s Setting up r-base-dev (4.4.3-1) ...
312s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
312s Processing triggers for libc-bin (2.41-1ubuntu2) ...
312s Processing triggers for man-db (2.13.0-1) ...
313s Processing triggers for install-info (7.1.1-1) ...
314s autopkgtest [18:12:15]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
314s autopkgtest [18:12:15]: test pkg-r-autopkgtest: [-----------------------
314s Test: Try to load the R library IsoSpecR
314s 
314s R version 4.4.3 (2025-02-28) -- "Trophy Case"
314s Copyright (C) 2025 The R Foundation for Statistical Computing
314s Platform: s390x-ibm-linux-gnu
314s 
314s R is free software and comes with ABSOLUTELY NO WARRANTY.
314s You are welcome to redistribute it under certain conditions.
314s Type 'license()' or 'licence()' for distribution details.
314s 
314s R is a collaborative project with many contributors.
314s Type 'contributors()' for more information and
314s 'citation()' on how to cite R or R packages in publications.
314s 
314s Type 'demo()' for some demos, 'help()' for on-line help, or
314s 'help.start()' for an HTML browser interface to help.
314s Type 'q()' to quit R.
314s 
314s > library('IsoSpecR')
314s > 
314s > 
314s Other tests are currently unsupported!
314s They will be progressively added.
315s autopkgtest [18:12:16]: test pkg-r-autopkgtest: -----------------------]
315s pkg-r-autopkgtest    PASS
315s autopkgtest [18:12:16]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
315s autopkgtest [18:12:16]: @@@@@@@@@@@@@@@@@@@@ summary
315s run-unit-test        PASS
315s pkg-r-autopkgtest    PASS
333s nova [W] Using flock in prodstack6-s390x
333s Creating nova instance adt-plucky-s390x-r-cran-isospecr-20250315-180701-juju-7f2275-prod-proposed-migration-environment-20-5148ead6-fc2e-42f8-9420-5561b75d4428 from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)...
333s nova [W] Timed out waiting for fd26bbbf-ad47-4895-9ff2-68119e94b1c1 to get deleted.