0s autopkgtest [18:05:27]: starting date and time: 2025-03-15 18:05:27+0000
  0s autopkgtest [18:05:27]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  0s autopkgtest [18:05:27]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.1_f9zern/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-cran-gsl --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-s390x-6.secgroup --name adt-plucky-s390x-r-cran-gsl-20250315-180527-juju-7f2275-prod-proposed-migration-environment-20-9320b019-9f67-4831-b7db-02fe0353d5ca --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
1014s autopkgtest [18:22:21]: testbed dpkg architecture: s390x
1015s autopkgtest [18:22:22]: testbed apt version: 2.9.33
1015s autopkgtest [18:22:22]: @@@@@@@@@@@@@@@@@@@@ test bed setup
1015s autopkgtest [18:22:22]: testbed release detected to be: None
1016s autopkgtest [18:22:23]: updating testbed package index (apt update)
1016s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB]
1016s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
1016s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
1017s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
1017s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB]
1017s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB]
1017s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB]
1017s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [113 kB]
1017s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1824 B]
1017s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B]
1017s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [320 kB]
1017s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [13.4 kB]
1017s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3776 B]
1017s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [240 B]
1018s Fetched 1073 kB in 1s (780 kB/s)
1018s Reading package lists...
1019s Reading package lists...
1019s Building dependency tree...
1019s Reading state information...
1019s Calculating upgrade...
1019s Calculating upgrade...
1019s The following packages were automatically installed and are no longer required:
1019s   libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64
1019s   linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic
1019s   linux-modules-6.11.0-8-generic linux-tools-6.11.0-8
1019s   linux-tools-6.11.0-8-generic
1019s Use 'sudo apt autoremove' to remove them.
1019s The following packages will be upgraded:
1019s   pinentry-curses python3-jinja2 strace
1019s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
1019s Need to get 652 kB of archives.
1019s After this operation, 27.6 kB of additional disk space will be used.
1019s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB]
1020s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x pinentry-curses s390x 1.3.1-2ubuntu3 [42.9 kB]
1020s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB]
1020s Fetched 652 kB in 1s (866 kB/s)
1020s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81428 files and directories currently installed.)
1020s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ...
1020s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ...
1020s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_s390x.deb ...
1020s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ...
1020s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ...
1020s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ...
1020s Setting up pinentry-curses (1.3.1-2ubuntu3) ...
1020s Setting up python3-jinja2 (3.1.5-2ubuntu1) ...
1020s Setting up strace (6.13+ds-1ubuntu1) ...
1020s Processing triggers for man-db (2.13.0-1) ...
1021s Reading package lists...
1021s Building dependency tree...
1021s Reading state information...
1021s Solving dependencies...
1021s The following packages will be REMOVED:
1021s   libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64*
1021s   linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
1021s   linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8*
1021s   linux-tools-6.11.0-8-generic*
1021s 0 upgraded, 0 newly installed, 9 to remove and 5 not upgraded.
1021s After this operation, 167 MB disk space will be freed.
1021s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
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(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81428 files and directories currently installed.)
1021s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
1021s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
1021s Removing libpython3.12t64:s390x (3.12.9-1) ...
1021s Removing libpython3.12-stdlib:s390x (3.12.9-1) ...
1022s Removing libnsl2:s390x (1.3.0-3build3) ...
1022s Removing libpython3.12-minimal:s390x (3.12.9-1) ...
1022s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
1022s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
1022s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
1022s Processing triggers for libc-bin (2.41-1ubuntu1) ...
1023s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56328 files and directories currently installed.)
1023s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ...
1023s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
1023s autopkgtest [18:22:30]: upgrading testbed (apt dist-upgrade and autopurge)
1023s Reading package lists...
1023s Building dependency tree...
1023s Reading state information...
1023s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
1023s Starting 2 pkgProblemResolver with broken count: 0
1023s Done
1023s Entering ResolveByKeep
1024s 
1024s Calculating upgrade...
1024s The following packages will be upgraded:
1024s   libc-bin libc-dev-bin libc6 libc6-dev locales
1024s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
1024s Need to get 9512 kB of archives.
1024s After this operation, 8192 B of additional disk space will be used.
1024s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6-dev s390x 2.41-1ubuntu2 [1678 kB]
1025s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-dev-bin s390x 2.41-1ubuntu2 [24.3 kB]
1025s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6 s390x 2.41-1ubuntu2 [2892 kB]
1027s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-bin s390x 2.41-1ubuntu2 [671 kB]
1028s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x locales all 2.41-1ubuntu2 [4246 kB]
1030s Preconfiguring packages ...
1030s Fetched 9512 kB in 7s (1452 kB/s)
1031s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
1031s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_s390x.deb ...
1031s Unpacking libc6-dev:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
1031s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_s390x.deb ...
1031s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
1031s Preparing to unpack .../libc6_2.41-1ubuntu2_s390x.deb ...
1031s Unpacking libc6:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
1031s Setting up libc6:s390x (2.41-1ubuntu2) ...
1031s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
1031s Preparing to unpack .../libc-bin_2.41-1ubuntu2_s390x.deb ...
1031s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
1031s Setting up libc-bin (2.41-1ubuntu2) ...
1031s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
1031s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ...
1031s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
1031s Setting up locales (2.41-1ubuntu2) ...
1031s Generating locales (this might take a while)...
1032s   en_US.UTF-8... done
1032s Generation complete.
1032s Setting up libc-dev-bin (2.41-1ubuntu2) ...
1032s Setting up libc6-dev:s390x (2.41-1ubuntu2) ...
1032s Processing triggers for man-db (2.13.0-1) ...
1033s Processing triggers for systemd (257.3-1ubuntu3) ...
1034s Reading package lists...
1034s Building dependency tree...
1034s Reading state information...
1034s Starting pkgProblemResolver with broken count: 0
1034s Starting 2 pkgProblemResolver with broken count: 0
1034s Done
1034s Solving dependencies...
1034s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
1034s autopkgtest [18:22:41]: rebooting testbed after setup commands that affected boot
1051s autopkgtest [18:22:58]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP Wed Mar 12 14:53:49 UTC 2025
1053s autopkgtest [18:23:00]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-gsl
1055s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-gsl 2.1-8-1build1 (dsc) [2029 B]
1055s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-gsl 2.1-8-1build1 (tar) [218 kB]
1055s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-gsl 2.1-8-1build1 (diff) [2828 B]
1055s gpgv: Signature made Tue Jul 30 06:55:46 2024 UTC
1055s gpgv:                using RSA key 92978A6E195E4921825F7FF0F34F09744E9F5DD9
1055s gpgv: Can't check signature: No public key
1055s dpkg-source: warning: cannot verify inline signature for ./r-cran-gsl_2.1-8-1build1.dsc: no acceptable signature found
1055s autopkgtest [18:23:02]: testing package r-cran-gsl version 2.1-8-1build1
1055s autopkgtest [18:23:02]: build not needed
1057s autopkgtest [18:23:04]: test vignette: preparing testbed
1057s Reading package lists...
1058s Building dependency tree...
1058s Reading state information...
1058s Starting pkgProblemResolver with broken count: 0
1058s Starting 2 pkgProblemResolver with broken count: 0
1058s Done
1058s The following NEW packages will be installed:
1058s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3
1058s   libcairo2 libdatrie1 libdeflate0 libfontconfig1 libfreetype6 libgfortran5
1058s   libgomp1 libgraphite2-3 libgsl28 libgslcblas0 libharfbuzz0b libice6 libjbig0
1058s   libjpeg-turbo8 libjpeg8 liblapack3 libpango-1.0-0 libpangocairo-1.0-0
1058s   libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6
1058s   libtcl8.6 libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0
1058s   libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 r-base-core r-cran-gsl
1058s   unzip x11-common xdg-utils zip
1058s 0 upgraded, 47 newly installed, 0 to remove and 0 not upgraded.
1058s Need to get 41.8 MB of archives.
1058s After this operation, 85.6 MB of additional disk space will be used.
1058s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB]
1059s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB]
1059s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB]
1059s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-2ubuntu1 [37.5 kB]
1059s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-2ubuntu1 [150 kB]
1059s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig s390x 2.15.0-2ubuntu1 [191 kB]
1059s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.1-2 [252 kB]
1060s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB]
1060s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB]
1060s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B]
1060s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB]
1060s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB]
1060s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB]
1060s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.23-1 [46.1 kB]
1060s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 15-20250222-0ubuntu1 [620 kB]
1060s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 15-20250222-0ubuntu1 [152 kB]
1060s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB]
1060s Get:18 http://ftpmaster.internal/ubuntu plucky/universe s390x libgslcblas0 s390x 2.8+dfsg-5 [153 kB]
1061s Get:19 http://ftpmaster.internal/ubuntu plucky/universe s390x libgsl28 s390x 2.8+dfsg-5 [1126 kB]
1061s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB]
1061s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB]
1061s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB]
1062s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB]
1062s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B]
1062s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.1-2 [2971 kB]
1063s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x libthai-data all 0.1.29-2build1 [158 kB]
1063s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB]
1063s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x libpango-1.0-0 s390x 1.56.2-1 [253 kB]
1064s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x libpangoft2-1.0-0 s390x 1.56.2-1 [50.2 kB]
1064s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libpangocairo-1.0-0 s390x 1.56.2-1 [28.2 kB]
1064s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB]
1064s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB]
1064s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB]
1064s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libsm6 s390x 2:1.2.4-1 [18.4 kB]
1064s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB]
1064s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB]
1064s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB]
1064s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB]
1064s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB]
1064s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B]
1065s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.16-1 [830 kB]
1065s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB]
1065s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x zip s390x 3.0-14ubuntu2 [187 kB]
1065s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x unzip s390x 6.0-28ubuntu6 [186 kB]
1065s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
1065s Get:46 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-core s390x 4.4.3-1 [28.6 MB]
1070s Get:47 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-gsl s390x 2.1-8-1build1 [487 kB]
1070s Preconfiguring packages ...
1070s Fetched 41.8 MB in 12s (3444 kB/s)
1070s Selecting previously unselected package libfreetype6:s390x.
1070s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
1070s Preparing to unpack .../00-libfreetype6_2.13.3+dfsg-1_s390x.deb ...
1070s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ...
1071s Selecting previously unselected package fonts-dejavu-mono.
1071s Preparing to unpack .../01-fonts-dejavu-mono_2.37-8_all.deb ...
1071s Unpacking fonts-dejavu-mono (2.37-8) ...
1071s Selecting previously unselected package fonts-dejavu-core.
1071s Preparing to unpack .../02-fonts-dejavu-core_2.37-8_all.deb ...
1071s Unpacking fonts-dejavu-core (2.37-8) ...
1071s Selecting previously unselected package fontconfig-config.
1071s Preparing to unpack .../03-fontconfig-config_2.15.0-2ubuntu1_s390x.deb ...
1071s Unpacking fontconfig-config (2.15.0-2ubuntu1) ...
1071s Selecting previously unselected package libfontconfig1:s390x.
1071s Preparing to unpack .../04-libfontconfig1_2.15.0-2ubuntu1_s390x.deb ...
1071s Unpacking libfontconfig1:s390x (2.15.0-2ubuntu1) ...
1071s Selecting previously unselected package fontconfig.
1071s Preparing to unpack .../05-fontconfig_2.15.0-2ubuntu1_s390x.deb ...
1071s Unpacking fontconfig (2.15.0-2ubuntu1) ...
1071s Selecting previously unselected package libblas3:s390x.
1071s Preparing to unpack .../06-libblas3_3.12.1-2_s390x.deb ...
1071s Unpacking libblas3:s390x (3.12.1-2) ...
1071s Selecting previously unselected package libpixman-1-0:s390x.
1071s Preparing to unpack .../07-libpixman-1-0_0.44.0-3_s390x.deb ...
1071s Unpacking libpixman-1-0:s390x (0.44.0-3) ...
1071s Selecting previously unselected package libxcb-render0:s390x.
1071s Preparing to unpack .../08-libxcb-render0_1.17.0-2_s390x.deb ...
1071s Unpacking libxcb-render0:s390x (1.17.0-2) ...
1071s Selecting previously unselected package libxcb-shm0:s390x.
1071s Preparing to unpack .../09-libxcb-shm0_1.17.0-2_s390x.deb ...
1071s Unpacking libxcb-shm0:s390x (1.17.0-2) ...
1071s Selecting previously unselected package libxrender1:s390x.
1071s Preparing to unpack .../10-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ...
1071s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ...
1071s Selecting previously unselected package libcairo2:s390x.
1071s Preparing to unpack .../11-libcairo2_1.18.2-2_s390x.deb ...
1071s Unpacking libcairo2:s390x (1.18.2-2) ...
1071s Selecting previously unselected package libdatrie1:s390x.
1071s Preparing to unpack .../12-libdatrie1_0.2.13-3build1_s390x.deb ...
1071s Unpacking libdatrie1:s390x (0.2.13-3build1) ...
1071s Selecting previously unselected package libdeflate0:s390x.
1071s Preparing to unpack .../13-libdeflate0_1.23-1_s390x.deb ...
1071s Unpacking libdeflate0:s390x (1.23-1) ...
1071s Selecting previously unselected package libgfortran5:s390x.
1071s Preparing to unpack .../14-libgfortran5_15-20250222-0ubuntu1_s390x.deb ...
1071s Unpacking libgfortran5:s390x (15-20250222-0ubuntu1) ...
1071s Selecting previously unselected package libgomp1:s390x.
1071s Preparing to unpack .../15-libgomp1_15-20250222-0ubuntu1_s390x.deb ...
1071s Unpacking libgomp1:s390x (15-20250222-0ubuntu1) ...
1071s Selecting previously unselected package libgraphite2-3:s390x.
1071s Preparing to unpack .../16-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ...
1071s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
1071s Selecting previously unselected package libgslcblas0:s390x.
1071s Preparing to unpack .../17-libgslcblas0_2.8+dfsg-5_s390x.deb ...
1071s Unpacking libgslcblas0:s390x (2.8+dfsg-5) ...
1071s Selecting previously unselected package libgsl28:s390x.
1071s Preparing to unpack .../18-libgsl28_2.8+dfsg-5_s390x.deb ...
1071s Unpacking libgsl28:s390x (2.8+dfsg-5) ...
1071s Selecting previously unselected package libharfbuzz0b:s390x.
1071s Preparing to unpack .../19-libharfbuzz0b_10.2.0-1_s390x.deb ...
1071s Unpacking libharfbuzz0b:s390x (10.2.0-1) ...
1071s Selecting previously unselected package x11-common.
1071s Preparing to unpack .../20-x11-common_1%3a7.7+23ubuntu3_all.deb ...
1071s Unpacking x11-common (1:7.7+23ubuntu3) ...
1071s Selecting previously unselected package libice6:s390x.
1071s Preparing to unpack .../21-libice6_2%3a1.1.1-1_s390x.deb ...
1071s Unpacking libice6:s390x (2:1.1.1-1) ...
1071s Selecting previously unselected package libjpeg-turbo8:s390x.
1071s Preparing to unpack .../22-libjpeg-turbo8_2.1.5-3ubuntu2_s390x.deb ...
1071s Unpacking libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ...
1071s Selecting previously unselected package libjpeg8:s390x.
1071s Preparing to unpack .../23-libjpeg8_8c-2ubuntu11_s390x.deb ...
1071s Unpacking libjpeg8:s390x (8c-2ubuntu11) ...
1071s Selecting previously unselected package liblapack3:s390x.
1071s Preparing to unpack .../24-liblapack3_3.12.1-2_s390x.deb ...
1071s Unpacking liblapack3:s390x (3.12.1-2) ...
1071s Selecting previously unselected package libthai-data.
1071s Preparing to unpack .../25-libthai-data_0.1.29-2build1_all.deb ...
1071s Unpacking libthai-data (0.1.29-2build1) ...
1071s Selecting previously unselected package libthai0:s390x.
1071s Preparing to unpack .../26-libthai0_0.1.29-2build1_s390x.deb ...
1071s Unpacking libthai0:s390x (0.1.29-2build1) ...
1071s Selecting previously unselected package libpango-1.0-0:s390x.
1071s Preparing to unpack .../27-libpango-1.0-0_1.56.2-1_s390x.deb ...
1071s Unpacking libpango-1.0-0:s390x (1.56.2-1) ...
1071s Selecting previously unselected package libpangoft2-1.0-0:s390x.
1071s Preparing to unpack .../28-libpangoft2-1.0-0_1.56.2-1_s390x.deb ...
1071s Unpacking libpangoft2-1.0-0:s390x (1.56.2-1) ...
1071s Selecting previously unselected package libpangocairo-1.0-0:s390x.
1071s Preparing to unpack .../29-libpangocairo-1.0-0_1.56.2-1_s390x.deb ...
1071s Unpacking libpangocairo-1.0-0:s390x (1.56.2-1) ...
1071s Selecting previously unselected package libpaper2:s390x.
1071s Preparing to unpack .../30-libpaper2_2.2.5-0.3_s390x.deb ...
1071s Unpacking libpaper2:s390x (2.2.5-0.3) ...
1071s Selecting previously unselected package libpaper-utils.
1071s Preparing to unpack .../31-libpaper-utils_2.2.5-0.3_s390x.deb ...
1071s Unpacking libpaper-utils (2.2.5-0.3) ...
1071s Selecting previously unselected package libsharpyuv0:s390x.
1071s Preparing to unpack .../32-libsharpyuv0_1.5.0-0.1_s390x.deb ...
1071s Unpacking libsharpyuv0:s390x (1.5.0-0.1) ...
1071s Selecting previously unselected package libsm6:s390x.
1071s Preparing to unpack .../33-libsm6_2%3a1.2.4-1_s390x.deb ...
1071s Unpacking libsm6:s390x (2:1.2.4-1) ...
1071s Selecting previously unselected package libtcl8.6:s390x.
1071s Preparing to unpack .../34-libtcl8.6_8.6.16+dfsg-1_s390x.deb ...
1071s Unpacking libtcl8.6:s390x (8.6.16+dfsg-1) ...
1071s Selecting previously unselected package libjbig0:s390x.
1071s Preparing to unpack .../35-libjbig0_2.1-6.1ubuntu2_s390x.deb ...
1071s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ...
1071s Selecting previously unselected package libwebp7:s390x.
1071s Preparing to unpack .../36-libwebp7_1.5.0-0.1_s390x.deb ...
1071s Unpacking libwebp7:s390x (1.5.0-0.1) ...
1071s Selecting previously unselected package libtiff6:s390x.
1071s Preparing to unpack .../37-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ...
1071s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ...
1071s Selecting previously unselected package libxft2:s390x.
1071s Preparing to unpack .../38-libxft2_2.3.6-1build1_s390x.deb ...
1071s Unpacking libxft2:s390x (2.3.6-1build1) ...
1071s Selecting previously unselected package libxss1:s390x.
1071s Preparing to unpack .../39-libxss1_1%3a1.2.3-1build3_s390x.deb ...
1071s Unpacking libxss1:s390x (1:1.2.3-1build3) ...
1071s Selecting previously unselected package libtk8.6:s390x.
1071s Preparing to unpack .../40-libtk8.6_8.6.16-1_s390x.deb ...
1071s Unpacking libtk8.6:s390x (8.6.16-1) ...
1071s Selecting previously unselected package libxt6t64:s390x.
1071s Preparing to unpack .../41-libxt6t64_1%3a1.2.1-1.2build1_s390x.deb ...
1071s Unpacking libxt6t64:s390x (1:1.2.1-1.2build1) ...
1071s Selecting previously unselected package zip.
1071s Preparing to unpack .../42-zip_3.0-14ubuntu2_s390x.deb ...
1071s Unpacking zip (3.0-14ubuntu2) ...
1071s Selecting previously unselected package unzip.
1071s Preparing to unpack .../43-unzip_6.0-28ubuntu6_s390x.deb ...
1071s Unpacking unzip (6.0-28ubuntu6) ...
1071s Selecting previously unselected package xdg-utils.
1071s Preparing to unpack .../44-xdg-utils_1.2.1-2ubuntu1_all.deb ...
1071s Unpacking xdg-utils (1.2.1-2ubuntu1) ...
1071s Selecting previously unselected package r-base-core.
1071s Preparing to unpack .../45-r-base-core_4.4.3-1_s390x.deb ...
1071s Unpacking r-base-core (4.4.3-1) ...
1071s Selecting previously unselected package r-cran-gsl.
1071s Preparing to unpack .../46-r-cran-gsl_2.1-8-1build1_s390x.deb ...
1071s Unpacking r-cran-gsl (2.1-8-1build1) ...
1071s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
1071s Setting up libpixman-1-0:s390x (0.44.0-3) ...
1071s Setting up libsharpyuv0:s390x (1.5.0-0.1) ...
1071s Setting up libxrender1:s390x (1:0.9.10-1.1build1) ...
1071s Setting up libdatrie1:s390x (0.2.13-3build1) ...
1071s Setting up libgslcblas0:s390x (2.8+dfsg-5) ...
1071s Setting up libxcb-render0:s390x (1.17.0-2) ...
1071s Setting up unzip (6.0-28ubuntu6) ...
1071s Setting up x11-common (1:7.7+23ubuntu3) ...
1072s Setting up libdeflate0:s390x (1.23-1) ...
1072s Setting up libxcb-shm0:s390x (1.17.0-2) ...
1072s Setting up libgomp1:s390x (15-20250222-0ubuntu1) ...
1072s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ...
1072s Setting up zip (3.0-14ubuntu2) ...
1072s Setting up libblas3:s390x (3.12.1-2) ...
1072s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
1072s Setting up libfreetype6:s390x (2.13.3+dfsg-1) ...
1072s Setting up fonts-dejavu-mono (2.37-8) ...
1072s Setting up libtcl8.6:s390x (8.6.16+dfsg-1) ...
1072s Setting up fonts-dejavu-core (2.37-8) ...
1072s Setting up libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ...
1072s Setting up libgfortran5:s390x (15-20250222-0ubuntu1) ...
1072s Setting up libwebp7:s390x (1.5.0-0.1) ...
1072s Setting up libharfbuzz0b:s390x (10.2.0-1) ...
1072s Setting up libthai-data (0.1.29-2build1) ...
1072s Setting up libxss1:s390x (1:1.2.3-1build3) ...
1072s Setting up libpaper2:s390x (2.2.5-0.3) ...
1072s Setting up libgsl28:s390x (2.8+dfsg-5) ...
1072s Setting up xdg-utils (1.2.1-2ubuntu1) ...
1072s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
1072s Setting up libjpeg8:s390x (8c-2ubuntu11) ...
1072s Setting up libice6:s390x (2:1.1.1-1) ...
1072s Setting up liblapack3:s390x (3.12.1-2) ...
1072s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
1072s Setting up fontconfig-config (2.15.0-2ubuntu1) ...
1072s Setting up libpaper-utils (2.2.5-0.3) ...
1072s Setting up libthai0:s390x (0.1.29-2build1) ...
1072s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu4) ...
1072s Setting up libfontconfig1:s390x (2.15.0-2ubuntu1) ...
1072s Setting up libsm6:s390x (2:1.2.4-1) ...
1072s Setting up fontconfig (2.15.0-2ubuntu1) ...
1074s Regenerating fonts cache... done.
1074s Setting up libxft2:s390x (2.3.6-1build1) ...
1074s Setting up libtk8.6:s390x (8.6.16-1) ...
1074s Setting up libpango-1.0-0:s390x (1.56.2-1) ...
1074s Setting up libcairo2:s390x (1.18.2-2) ...
1074s Setting up libxt6t64:s390x (1:1.2.1-1.2build1) ...
1074s Setting up libpangoft2-1.0-0:s390x (1.56.2-1) ...
1074s Setting up libpangocairo-1.0-0:s390x (1.56.2-1) ...
1074s Setting up r-base-core (4.4.3-1) ...
1074s Creating config file /etc/R/Renviron with new version
1074s Setting up r-cran-gsl (2.1-8-1build1) ...
1074s Processing triggers for man-db (2.13.0-1) ...
1075s Processing triggers for install-info (7.1.1-1) ...
1075s Processing triggers for libc-bin (2.41-1ubuntu2) ...
1076s autopkgtest [18:23:23]: test vignette: [-----------------------
1076s BEGIN VIGNETTE vignettes/gsl.Rnw
1076s Output file:  gsl.tex
1077s autopkgtest [18:23:24]: test vignette: -----------------------]
1077s autopkgtest [18:23:24]: test vignette:  - - - - - - - - - - results - - - - - - - - - -
1077s vignette             PASS
1077s autopkgtest [18:23:24]: test pkg-r-autopkgtest: preparing testbed
1078s Reading package lists...
1078s Building dependency tree...
1078s Reading state information...
1078s Starting pkgProblemResolver with broken count: 0
1078s Starting 2 pkgProblemResolver with broken count: 0
1078s Done
1078s The following NEW packages will be installed:
1078s   build-essential cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu
1078s   dctrl-tools g++ g++-14 g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14
1078s   gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-14
1078s   gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools libasan8
1078s   libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev
1078s   libgfortran-14-dev libicu-dev libisl23 libitm1 libjpeg-dev
1078s   libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblzma-dev libmpc3
1078s   libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
1078s   libpkgconf3 libpng-dev libreadline-dev libstdc++-14-dev libtirpc-dev
1078s   libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev zlib1g-dev
1078s 0 upgraded, 51 newly installed, 0 to remove and 0 not upgraded.
1078s Need to get 82.3 MB of archives.
1078s After this operation, 279 MB of additional disk space will be used.
1078s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libisl23 s390x 0.27-1 [704 kB]
1079s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB]
1079s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [9572 kB]
1080s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14 s390x 14.2.0-17ubuntu3 [1028 B]
1080s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [5556 B]
1080s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x cpp s390x 4:14.2.0-1ubuntu1 [22.4 kB]
1080s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libcc1-0 s390x 15-20250222-0ubuntu1 [49.2 kB]
1080s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libitm1 s390x 15-20250222-0ubuntu1 [31.2 kB]
1080s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libasan8 s390x 15-20250222-0ubuntu1 [2970 kB]
1080s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libubsan1 s390x 15-20250222-0ubuntu1 [1212 kB]
1080s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-14-dev s390x 14.2.0-17ubuntu3 [1037 kB]
1080s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [18.7 MB]
1082s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14 s390x 14.2.0-17ubuntu3 [526 kB]
1082s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1204 B]
1082s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x gcc s390x 4:14.2.0-1ubuntu1 [5004 B]
1082s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++-14-dev s390x 14.2.0-17ubuntu3 [2611 kB]
1082s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [11.0 MB]
1082s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14 s390x 14.2.0-17ubuntu3 [21.8 kB]
1082s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x g++-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [956 B]
1082s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x g++ s390x 4:14.2.0-1ubuntu1 [1080 B]
1082s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x build-essential s390x 12.10ubuntu1 [4930 B]
1082s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x dctrl-tools s390x 2.24-3build3 [106 kB]
1082s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran-14-dev s390x 14.2.0-17ubuntu3 [654 kB]
1082s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [10.3 MB]
1082s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14 s390x 14.2.0-17ubuntu3 [13.6 kB]
1082s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1012 B]
1082s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran s390x 4:14.2.0-1ubuntu1 [1160 B]
1082s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x icu-devtools s390x 76.1-1ubuntu2 [225 kB]
1082s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x libblas-dev s390x 3.12.1-2 [254 kB]
1083s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libbz2-dev s390x 1.0.8-6 [39.1 kB]
1083s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate-dev s390x 1.23-1 [52.2 kB]
1083s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libicu-dev s390x 76.1-1ubuntu2 [12.2 MB]
1083s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8-dev s390x 2.1.5-3ubuntu2 [281 kB]
1083s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B]
1083s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B]
1083s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack-dev s390x 3.12.1-2 [5967 kB]
1083s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libncurses-dev s390x 6.5+20250216-2 [407 kB]
1083s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-16-0 s390x 10.45-1 [259 kB]
1083s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-32-0 s390x 10.45-1 [245 kB]
1083s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-posix3 s390x 10.45-1 [7080 B]
1083s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-dev s390x 10.45-1 [899 kB]
1083s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libpkgconf3 s390x 1.8.1-4 [31.2 kB]
1083s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB]
1083s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x libpng-dev s390x 1.6.47-1 [278 kB]
1083s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libreadline-dev s390x 8.2-6 [187 kB]
1083s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x liblzma-dev s390x 5.6.4-1 [183 kB]
1083s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf-bin s390x 1.8.1-4 [21.5 kB]
1083s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf s390x 1.8.1-4 [16.7 kB]
1083s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x libtirpc-dev s390x 1.3.4+ds-1.3 [196 kB]
1083s Get:50 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-dev all 4.4.3-1 [4176 B]
1083s Get:51 http://ftpmaster.internal/ubuntu plucky/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
1084s Fetched 82.3 MB in 5s (15.8 MB/s)
1084s Selecting previously unselected package libisl23:s390x.
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1084s Preparing to unpack .../00-libisl23_0.27-1_s390x.deb ...
1084s Unpacking libisl23:s390x (0.27-1) ...
1084s Selecting previously unselected package libmpc3:s390x.
1084s Preparing to unpack .../01-libmpc3_1.3.1-1build2_s390x.deb ...
1084s Unpacking libmpc3:s390x (1.3.1-1build2) ...
1084s Selecting previously unselected package cpp-14-s390x-linux-gnu.
1084s Preparing to unpack .../02-cpp-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
1084s Unpacking cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
1084s Selecting previously unselected package cpp-14.
1084s Preparing to unpack .../03-cpp-14_14.2.0-17ubuntu3_s390x.deb ...
1084s Unpacking cpp-14 (14.2.0-17ubuntu3) ...
1084s Selecting previously unselected package cpp-s390x-linux-gnu.
1084s Preparing to unpack .../04-cpp-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
1084s Unpacking cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
1084s Selecting previously unselected package cpp.
1084s Preparing to unpack .../05-cpp_4%3a14.2.0-1ubuntu1_s390x.deb ...
1084s Unpacking cpp (4:14.2.0-1ubuntu1) ...
1084s Selecting previously unselected package libcc1-0:s390x.
1084s Preparing to unpack .../06-libcc1-0_15-20250222-0ubuntu1_s390x.deb ...
1084s Unpacking libcc1-0:s390x (15-20250222-0ubuntu1) ...
1084s Selecting previously unselected package libitm1:s390x.
1084s Preparing to unpack .../07-libitm1_15-20250222-0ubuntu1_s390x.deb ...
1084s Unpacking libitm1:s390x (15-20250222-0ubuntu1) ...
1084s Selecting previously unselected package libasan8:s390x.
1084s Preparing to unpack .../08-libasan8_15-20250222-0ubuntu1_s390x.deb ...
1084s Unpacking libasan8:s390x (15-20250222-0ubuntu1) ...
1084s Selecting previously unselected package libubsan1:s390x.
1084s Preparing to unpack .../09-libubsan1_15-20250222-0ubuntu1_s390x.deb ...
1084s Unpacking libubsan1:s390x (15-20250222-0ubuntu1) ...
1084s Selecting previously unselected package libgcc-14-dev:s390x.
1084s Preparing to unpack .../10-libgcc-14-dev_14.2.0-17ubuntu3_s390x.deb ...
1084s Unpacking libgcc-14-dev:s390x (14.2.0-17ubuntu3) ...
1084s Selecting previously unselected package gcc-14-s390x-linux-gnu.
1084s Preparing to unpack .../11-gcc-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
1084s Unpacking gcc-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
1084s Selecting previously unselected package gcc-14.
1084s Preparing to unpack .../12-gcc-14_14.2.0-17ubuntu3_s390x.deb ...
1084s Unpacking gcc-14 (14.2.0-17ubuntu3) ...
1084s Selecting previously unselected package gcc-s390x-linux-gnu.
1084s Preparing to unpack .../13-gcc-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
1084s Unpacking gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
1084s Selecting previously unselected package gcc.
1084s Preparing to unpack .../14-gcc_4%3a14.2.0-1ubuntu1_s390x.deb ...
1084s Unpacking gcc (4:14.2.0-1ubuntu1) ...
1084s Selecting previously unselected package libstdc++-14-dev:s390x.
1084s Preparing to unpack .../15-libstdc++-14-dev_14.2.0-17ubuntu3_s390x.deb ...
1084s Unpacking libstdc++-14-dev:s390x (14.2.0-17ubuntu3) ...
1084s Selecting previously unselected package g++-14-s390x-linux-gnu.
1084s Preparing to unpack .../16-g++-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
1084s Unpacking g++-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
1084s Selecting previously unselected package g++-14.
1084s Preparing to unpack .../17-g++-14_14.2.0-17ubuntu3_s390x.deb ...
1084s Unpacking g++-14 (14.2.0-17ubuntu3) ...
1084s Selecting previously unselected package g++-s390x-linux-gnu.
1084s Preparing to unpack .../18-g++-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
1084s Unpacking g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
1085s Selecting previously unselected package g++.
1085s Preparing to unpack .../19-g++_4%3a14.2.0-1ubuntu1_s390x.deb ...
1085s Unpacking g++ (4:14.2.0-1ubuntu1) ...
1085s Selecting previously unselected package build-essential.
1085s Preparing to unpack .../20-build-essential_12.10ubuntu1_s390x.deb ...
1085s Unpacking build-essential (12.10ubuntu1) ...
1085s Selecting previously unselected package dctrl-tools.
1085s Preparing to unpack .../21-dctrl-tools_2.24-3build3_s390x.deb ...
1085s Unpacking dctrl-tools (2.24-3build3) ...
1085s Selecting previously unselected package libgfortran-14-dev:s390x.
1085s Preparing to unpack .../22-libgfortran-14-dev_14.2.0-17ubuntu3_s390x.deb ...
1085s Unpacking libgfortran-14-dev:s390x (14.2.0-17ubuntu3) ...
1085s Selecting previously unselected package gfortran-14-s390x-linux-gnu.
1085s Preparing to unpack .../23-gfortran-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
1085s Unpacking gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
1085s Selecting previously unselected package gfortran-14.
1085s Preparing to unpack .../24-gfortran-14_14.2.0-17ubuntu3_s390x.deb ...
1085s Unpacking gfortran-14 (14.2.0-17ubuntu3) ...
1085s Selecting previously unselected package gfortran-s390x-linux-gnu.
1085s Preparing to unpack .../25-gfortran-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
1085s Unpacking gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
1085s Selecting previously unselected package gfortran.
1085s Preparing to unpack .../26-gfortran_4%3a14.2.0-1ubuntu1_s390x.deb ...
1085s Unpacking gfortran (4:14.2.0-1ubuntu1) ...
1085s Selecting previously unselected package icu-devtools.
1085s Preparing to unpack .../27-icu-devtools_76.1-1ubuntu2_s390x.deb ...
1085s Unpacking icu-devtools (76.1-1ubuntu2) ...
1085s Selecting previously unselected package libblas-dev:s390x.
1085s Preparing to unpack .../28-libblas-dev_3.12.1-2_s390x.deb ...
1085s Unpacking libblas-dev:s390x (3.12.1-2) ...
1085s Selecting previously unselected package libbz2-dev:s390x.
1085s Preparing to unpack .../29-libbz2-dev_1.0.8-6_s390x.deb ...
1085s Unpacking libbz2-dev:s390x (1.0.8-6) ...
1085s Selecting previously unselected package libdeflate-dev:s390x.
1085s Preparing to unpack .../30-libdeflate-dev_1.23-1_s390x.deb ...
1085s Unpacking libdeflate-dev:s390x (1.23-1) ...
1085s Selecting previously unselected package libicu-dev:s390x.
1085s Preparing to unpack .../31-libicu-dev_76.1-1ubuntu2_s390x.deb ...
1085s Unpacking libicu-dev:s390x (76.1-1ubuntu2) ...
1085s Selecting previously unselected package libjpeg-turbo8-dev:s390x.
1085s Preparing to unpack .../32-libjpeg-turbo8-dev_2.1.5-3ubuntu2_s390x.deb ...
1085s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ...
1085s Selecting previously unselected package libjpeg8-dev:s390x.
1085s Preparing to unpack .../33-libjpeg8-dev_8c-2ubuntu11_s390x.deb ...
1085s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ...
1085s Selecting previously unselected package libjpeg-dev:s390x.
1085s Preparing to unpack .../34-libjpeg-dev_8c-2ubuntu11_s390x.deb ...
1085s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ...
1085s Selecting previously unselected package liblapack-dev:s390x.
1085s Preparing to unpack .../35-liblapack-dev_3.12.1-2_s390x.deb ...
1085s Unpacking liblapack-dev:s390x (3.12.1-2) ...
1085s Selecting previously unselected package libncurses-dev:s390x.
1085s Preparing to unpack .../36-libncurses-dev_6.5+20250216-2_s390x.deb ...
1085s Unpacking libncurses-dev:s390x (6.5+20250216-2) ...
1085s Selecting previously unselected package libpcre2-16-0:s390x.
1085s Preparing to unpack .../37-libpcre2-16-0_10.45-1_s390x.deb ...
1085s Unpacking libpcre2-16-0:s390x (10.45-1) ...
1085s Selecting previously unselected package libpcre2-32-0:s390x.
1085s Preparing to unpack .../38-libpcre2-32-0_10.45-1_s390x.deb ...
1085s Unpacking libpcre2-32-0:s390x (10.45-1) ...
1085s Selecting previously unselected package libpcre2-posix3:s390x.
1085s Preparing to unpack .../39-libpcre2-posix3_10.45-1_s390x.deb ...
1085s Unpacking libpcre2-posix3:s390x (10.45-1) ...
1085s Selecting previously unselected package libpcre2-dev:s390x.
1085s Preparing to unpack .../40-libpcre2-dev_10.45-1_s390x.deb ...
1085s Unpacking libpcre2-dev:s390x (10.45-1) ...
1085s Selecting previously unselected package libpkgconf3:s390x.
1085s Preparing to unpack .../41-libpkgconf3_1.8.1-4_s390x.deb ...
1085s Unpacking libpkgconf3:s390x (1.8.1-4) ...
1085s Selecting previously unselected package zlib1g-dev:s390x.
1085s Preparing to unpack .../42-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_s390x.deb ...
1085s Unpacking zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
1085s Selecting previously unselected package libpng-dev:s390x.
1085s Preparing to unpack .../43-libpng-dev_1.6.47-1_s390x.deb ...
1085s Unpacking libpng-dev:s390x (1.6.47-1) ...
1085s Selecting previously unselected package libreadline-dev:s390x.
1085s Preparing to unpack .../44-libreadline-dev_8.2-6_s390x.deb ...
1085s Unpacking libreadline-dev:s390x (8.2-6) ...
1085s Selecting previously unselected package liblzma-dev:s390x.
1085s Preparing to unpack .../45-liblzma-dev_5.6.4-1_s390x.deb ...
1085s Unpacking liblzma-dev:s390x (5.6.4-1) ...
1085s Selecting previously unselected package pkgconf-bin.
1085s Preparing to unpack .../46-pkgconf-bin_1.8.1-4_s390x.deb ...
1085s Unpacking pkgconf-bin (1.8.1-4) ...
1085s Selecting previously unselected package pkgconf:s390x.
1085s Preparing to unpack .../47-pkgconf_1.8.1-4_s390x.deb ...
1085s Unpacking pkgconf:s390x (1.8.1-4) ...
1085s Selecting previously unselected package libtirpc-dev:s390x.
1085s Preparing to unpack .../48-libtirpc-dev_1.3.4+ds-1.3_s390x.deb ...
1085s Unpacking libtirpc-dev:s390x (1.3.4+ds-1.3) ...
1085s Selecting previously unselected package r-base-dev.
1085s Preparing to unpack .../49-r-base-dev_4.4.3-1_all.deb ...
1085s Unpacking r-base-dev (4.4.3-1) ...
1085s Selecting previously unselected package pkg-r-autopkgtest.
1085s Preparing to unpack .../50-pkg-r-autopkgtest_20231212ubuntu1_all.deb ...
1085s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ...
1085s Setting up libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ...
1085s Setting up libncurses-dev:s390x (6.5+20250216-2) ...
1085s Setting up libreadline-dev:s390x (8.2-6) ...
1085s Setting up libpcre2-16-0:s390x (10.45-1) ...
1085s Setting up libpcre2-32-0:s390x (10.45-1) ...
1085s Setting up libtirpc-dev:s390x (1.3.4+ds-1.3) ...
1085s Setting up libpkgconf3:s390x (1.8.1-4) ...
1085s Setting up libmpc3:s390x (1.3.1-1build2) ...
1085s Setting up icu-devtools (76.1-1ubuntu2) ...
1085s Setting up pkgconf-bin (1.8.1-4) ...
1085s Setting up liblzma-dev:s390x (5.6.4-1) ...
1085s Setting up libubsan1:s390x (15-20250222-0ubuntu1) ...
1085s Setting up zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
1085s Setting up libpcre2-posix3:s390x (10.45-1) ...
1085s Setting up libasan8:s390x (15-20250222-0ubuntu1) ...
1085s Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ...
1085s Setting up libisl23:s390x (0.27-1) ...
1085s Setting up libdeflate-dev:s390x (1.23-1) ...
1085s Setting up libicu-dev:s390x (76.1-1ubuntu2) ...
1085s Setting up libcc1-0:s390x (15-20250222-0ubuntu1) ...
1085s Setting up libblas-dev:s390x (3.12.1-2) ...
1085s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so to provide /usr/lib/s390x-linux-gnu/libblas.so (libblas.so-s390x-linux-gnu) in auto mode
1085s Setting up dctrl-tools (2.24-3build3) ...
1085s Setting up libitm1:s390x (15-20250222-0ubuntu1) ...
1085s Setting up libbz2-dev:s390x (1.0.8-6) ...
1085s Setting up libpcre2-dev:s390x (10.45-1) ...
1085s Setting up libpng-dev:s390x (1.6.47-1) ...
1085s Setting up libjpeg-dev:s390x (8c-2ubuntu11) ...
1085s Setting up pkgconf:s390x (1.8.1-4) ...
1085s Setting up liblapack-dev:s390x (3.12.1-2) ...
1085s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode
1085s Setting up cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
1085s Setting up cpp-14 (14.2.0-17ubuntu3) ...
1085s Setting up libgcc-14-dev:s390x (14.2.0-17ubuntu3) ...
1085s Setting up libstdc++-14-dev:s390x (14.2.0-17ubuntu3) ...
1085s Setting up libgfortran-14-dev:s390x (14.2.0-17ubuntu3) ...
1085s Setting up cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
1085s Setting up gcc-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
1085s Setting up gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
1085s Setting up g++-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
1085s Setting up cpp (4:14.2.0-1ubuntu1) ...
1085s Setting up gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
1085s Setting up g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
1085s Setting up gcc-14 (14.2.0-17ubuntu3) ...
1085s Setting up g++-14 (14.2.0-17ubuntu3) ...
1085s Setting up gfortran-14 (14.2.0-17ubuntu3) ...
1085s Setting up gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
1085s Setting up gcc (4:14.2.0-1ubuntu1) ...
1085s Setting up g++ (4:14.2.0-1ubuntu1) ...
1085s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
1085s Setting up build-essential (12.10ubuntu1) ...
1085s Setting up gfortran (4:14.2.0-1ubuntu1) ...
1085s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
1085s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
1085s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
1085s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
1085s Setting up r-base-dev (4.4.3-1) ...
1085s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
1085s Processing triggers for libc-bin (2.41-1ubuntu2) ...
1085s Processing triggers for man-db (2.13.0-1) ...
1086s Processing triggers for install-info (7.1.1-1) ...
1086s autopkgtest [18:23:33]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
1086s autopkgtest [18:23:33]: test pkg-r-autopkgtest: [-----------------------
1087s Test: Try to load the R library gsl
1087s 
1087s R version 4.4.3 (2025-02-28) -- "Trophy Case"
1087s Copyright (C) 2025 The R Foundation for Statistical Computing
1087s Platform: s390x-ibm-linux-gnu
1087s 
1087s R is free software and comes with ABSOLUTELY NO WARRANTY.
1087s You are welcome to redistribute it under certain conditions.
1087s Type 'license()' or 'licence()' for distribution details.
1087s 
1087s R is a collaborative project with many contributors.
1087s Type 'contributors()' for more information and
1087s 'citation()' on how to cite R or R packages in publications.
1087s 
1087s Type 'demo()' for some demos, 'help()' for on-line help, or
1087s 'help.start()' for an HTML browser interface to help.
1087s Type 'q()' to quit R.
1087s 
1087s > library('gsl')
1087s > 
1087s > 
1087s Other tests are currently unsupported!
1087s They will be progressively added.
1087s autopkgtest [18:23:34]: test pkg-r-autopkgtest: -----------------------]
1087s pkg-r-autopkgtest    PASS
1087s autopkgtest [18:23:34]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
1088s autopkgtest [18:23:35]: @@@@@@@@@@@@@@@@@@@@ summary
1088s vignette             PASS
1088s pkg-r-autopkgtest    PASS
1104s nova [W] Using flock in prodstack6-s390x
1104s Creating nova instance adt-plucky-s390x-r-cran-gsl-20250315-180527-juju-7f2275-prod-proposed-migration-environment-20-9320b019-9f67-4831-b7db-02fe0353d5ca from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)...
1104s nova [W] nova quota exceeded (attempt #0)
1104s nova [W] Timed out waiting for 88c7d478-dcae-47d7-92c6-b1b64cf55330 to get deleted.