0s autopkgtest [04:42:19]: starting date and time: 2025-02-19 04:42:19+0000
  0s autopkgtest [04:42:19]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  0s autopkgtest [04:42:19]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.9lq6v9dw/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-filehash --apt-upgrade r-cran-filehash --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-filehash/2.4-6-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-s390x-7.secgroup --name adt-plucky-s390x-r-cran-filehash-20250219-044219-juju-7f2275-prod-proposed-migration-environment-20-59f887a8-0ff0-4f3d-b921-15f842dc7f84 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
101s autopkgtest [04:44:00]: testbed dpkg architecture: s390x
101s autopkgtest [04:44:00]: testbed apt version: 2.9.29
101s autopkgtest [04:44:00]: @@@@@@@@@@@@@@@@@@@@ test bed setup
101s autopkgtest [04:44:00]: testbed release detected to be: None
102s autopkgtest [04:44:01]: updating testbed package index (apt update)
102s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB]
102s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
103s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
103s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
103s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.6 kB]
103s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.2 kB]
103s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [3120 B]
103s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [770 kB]
103s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [93.9 kB]
103s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x Packages [760 B]
103s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [648 kB]
103s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [5836 B]
103s Fetched 1723 kB in 1s (1790 kB/s)
104s Reading package lists...
104s Reading package lists...
104s Building dependency tree...
104s Reading state information...
104s Calculating upgrade...
105s The following packages were automatically installed and are no longer required:
105s   libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64
105s   linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic
105s   linux-modules-6.11.0-8-generic linux-tools-6.11.0-8
105s   linux-tools-6.11.0-8-generic
105s Use 'sudo apt autoremove' to remove them.
105s The following NEW packages will be installed:
105s   libapt-pkg7.0
105s The following packages will be upgraded:
105s   apt apt-utils dhcpcd-base rsyslog s390-tools s390-tools-data
105s   s390-tools-signed
105s 7 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
105s Need to get 8909 kB of archives.
105s After this operation, 3624 kB of additional disk space will be used.
105s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libapt-pkg7.0 s390x 2.9.30 [1103 kB]
105s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x apt s390x 2.9.30 [1418 kB]
105s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x apt-utils s390x 2.9.30 [214 kB]
105s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x dhcpcd-base s390x 1:10.1.0-7 [219 kB]
105s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x rsyslog s390x 8.2412.0-2ubuntu1 [536 kB]
105s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x s390-tools-data all 2.37.0-0ubuntu2 [20.4 kB]
105s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x s390-tools s390x 2.37.0-0ubuntu2 [5385 kB]
106s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x s390-tools-signed all 2.37.0-0ubuntu2 [12.4 kB]
106s Fetched 8909 kB in 1s (8132 kB/s)
106s Selecting previously unselected package libapt-pkg7.0:s390x.
106s (Reading database ... 
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(Reading database ... 75%
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(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 80980 files and directories currently installed.)
106s Preparing to unpack .../libapt-pkg7.0_2.9.30_s390x.deb ...
106s Unpacking libapt-pkg7.0:s390x (2.9.30) ...
106s Setting up libapt-pkg7.0:s390x (2.9.30) ...
106s (Reading database ... 
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(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81029 files and directories currently installed.)
106s Preparing to unpack .../archives/apt_2.9.30_s390x.deb ...
106s Unpacking apt (2.9.30) over (2.9.29) ...
106s Setting up apt (2.9.30) ...
107s (Reading database ... 
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(Reading database ... 75%
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81029 files and directories currently installed.)
107s Preparing to unpack .../0-apt-utils_2.9.30_s390x.deb ...
107s Unpacking apt-utils (2.9.30) over (2.9.29) ...
107s Preparing to unpack .../1-dhcpcd-base_1%3a10.1.0-7_s390x.deb ...
107s Unpacking dhcpcd-base (1:10.1.0-7) over (1:10.1.0-6) ...
107s Preparing to unpack .../2-rsyslog_8.2412.0-2ubuntu1_s390x.deb ...
107s Unpacking rsyslog (8.2412.0-2ubuntu1) over (8.2412.0-1ubuntu1) ...
107s Preparing to unpack .../3-s390-tools-data_2.37.0-0ubuntu2_all.deb ...
107s Unpacking s390-tools-data (2.37.0-0ubuntu2) over (2.37.0-0ubuntu1) ...
107s Preparing to unpack .../4-s390-tools_2.37.0-0ubuntu2_s390x.deb ...
107s Unpacking s390-tools (2.37.0-0ubuntu2) over (2.37.0-0ubuntu1) ...
107s Preparing to unpack .../5-s390-tools-signed_2.37.0-0ubuntu2_all.deb ...
107s Unpacking s390-tools-signed (2.37.0-0ubuntu2) over (2.37.0-0ubuntu1) ...
107s Setting up apt-utils (2.9.30) ...
107s Setting up rsyslog (8.2412.0-2ubuntu1) ...
107s info: The user `syslog' is already a member of `adm'.
108s Setting up s390-tools-signed (2.37.0-0ubuntu2) ...
108s Setting up dhcpcd-base (1:10.1.0-7) ...
108s Setting up s390-tools-data (2.37.0-0ubuntu2) ...
108s Setting up s390-tools (2.37.0-0ubuntu2) ...
109s Processing triggers for libc-bin (2.40-4ubuntu1) ...
109s Processing triggers for man-db (2.13.0-1) ...
110s Processing triggers for initramfs-tools (0.145ubuntu2) ...
110s update-initramfs: Generating /boot/initrd.img-6.12.0-15-generic
110s W: No lz4 in /usr/bin:/sbin:/bin, using gzip
114s Using config file '/etc/zipl.conf'
114s Building bootmap in '/boot'
114s Adding IPL section 'ubuntu' (default)
114s Preparing boot device for LD-IPL: vda (0000).
114s Done.
114s Reading package lists...
115s Building dependency tree...
115s Reading state information...
115s The following packages will be REMOVED:
115s   libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64*
115s   linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
115s   linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8*
115s   linux-tools-6.11.0-8-generic*
115s 0 upgraded, 0 newly installed, 9 to remove and 0 not upgraded.
115s After this operation, 167 MB disk space will be freed.
115s (Reading database ... 
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(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81030 files and directories currently installed.)
115s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
115s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
115s Removing libpython3.12t64:s390x (3.12.9-1) ...
115s Removing libpython3.12-stdlib:s390x (3.12.9-1) ...
115s Removing libnsl2:s390x (1.3.0-3build3) ...
115s Removing libpython3.12-minimal:s390x (3.12.9-1) ...
115s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
115s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
116s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
116s Processing triggers for libc-bin (2.40-4ubuntu1) ...
116s (Reading database ... 
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(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 55930 files and directories currently installed.)
116s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ...
116s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
116s autopkgtest [04:44:15]: upgrading testbed (apt dist-upgrade and autopurge)
116s Reading package lists...
117s Building dependency tree...
117s Reading state information...
117s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
117s Starting 2 pkgProblemResolver with broken count: 0
117s Done
117s Entering ResolveByKeep
117s 
117s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
117s Reading package lists...
117s Building dependency tree...
117s Reading state information...
118s Starting pkgProblemResolver with broken count: 0
118s Starting 2 pkgProblemResolver with broken count: 0
118s Done
118s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
118s autopkgtest [04:44:17]: rebooting testbed after setup commands that affected boot
136s autopkgtest [04:44:35]: testbed running kernel: Linux 6.12.0-15-generic #15-Ubuntu SMP Tue Feb  4 15:05:57 UTC 2025
139s autopkgtest [04:44:38]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-filehash
140s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-filehash 2.4-6-1 (dsc) [2093 B]
140s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-filehash 2.4-6-1 (tar) [148 kB]
140s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/universe r-cran-filehash 2.4-6-1 (diff) [3880 B]
140s gpgv: Signature made Fri Sep  6 05:47:24 2024 UTC
140s gpgv:                using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502
140s gpgv:                issuer "plessy@debian.org"
140s gpgv: Can't check signature: No public key
140s dpkg-source: warning: cannot verify inline signature for ./r-cran-filehash_2.4-6-1.dsc: no acceptable signature found
140s autopkgtest [04:44:39]: testing package r-cran-filehash version 2.4-6-1
141s autopkgtest [04:44:40]: build not needed
144s autopkgtest [04:44:43]: test run-unit-test: preparing testbed
144s Reading package lists...
144s Building dependency tree...
144s Reading state information...
144s Starting pkgProblemResolver with broken count: 0
144s Starting 2 pkgProblemResolver with broken count: 0
144s Done
144s The following NEW packages will be installed:
144s   fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono libblas3
144s   libcairo2 libdatrie1 libdeflate0 libfontconfig1 libfreetype6 libgfortran5
144s   libgomp1 libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg-turbo8
144s   libjpeg8 liblapack3 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
144s   libpaper-utils libpaper2 libpixman-1-0 libsharpyuv0 libsm6 libtcl8.6
144s   libthai-data libthai0 libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0
144s   libxft2 libxrender1 libxss1 libxt6t64 r-base-core r-cran-digest
144s   r-cran-filehash unzip x11-common xdg-utils zip
145s 0 upgraded, 46 newly installed, 0 to remove and 0 not upgraded.
145s Need to get 40.6 MB of archives.
145s After this operation, 81.9 MB of additional disk space will be used.
145s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB]
145s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB]
145s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB]
145s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-2ubuntu1 [37.5 kB]
145s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-2ubuntu1 [150 kB]
145s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig s390x 2.15.0-2ubuntu1 [191 kB]
145s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.1-2 [252 kB]
145s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB]
145s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB]
145s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B]
145s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB]
145s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB]
145s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB]
145s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.23-1 [46.1 kB]
145s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 15-20250213-1ubuntu1 [620 kB]
145s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 15-20250213-1ubuntu1 [151 kB]
145s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB]
145s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB]
145s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB]
145s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB]
145s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB]
145s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B]
145s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.1-2 [2971 kB]
145s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libthai-data all 0.1.29-2build1 [158 kB]
146s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB]
146s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x libpango-1.0-0 s390x 1.56.1-1 [253 kB]
146s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x libpangoft2-1.0-0 s390x 1.56.1-1 [50.3 kB]
146s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x libpangocairo-1.0-0 s390x 1.56.1-1 [28.3 kB]
146s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB]
146s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB]
146s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB]
146s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libsm6 s390x 2:1.2.4-1 [18.4 kB]
146s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB]
146s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB]
146s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB]
146s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB]
146s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB]
146s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B]
146s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.16-1 [830 kB]
146s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB]
146s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x zip s390x 3.0-14ubuntu2 [187 kB]
146s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x unzip s390x 6.0-28ubuntu6 [186 kB]
146s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
146s Get:44 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-core s390x 4.4.2-1build1 [28.6 MB]
147s Get:45 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-digest s390x 0.6.37-1 [205 kB]
147s Get:46 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x r-cran-filehash s390x 2.4-6-1 [365 kB]
147s Preconfiguring packages ...
147s Fetched 40.6 MB in 2s (18.8 MB/s)
147s Selecting previously unselected package libfreetype6:s390x.
147s (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 55928 files and directories currently installed.)
147s Preparing to unpack .../00-libfreetype6_2.13.3+dfsg-1_s390x.deb ...
147s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ...
147s Selecting previously unselected package fonts-dejavu-mono.
147s Preparing to unpack .../01-fonts-dejavu-mono_2.37-8_all.deb ...
147s Unpacking fonts-dejavu-mono (2.37-8) ...
147s Selecting previously unselected package fonts-dejavu-core.
147s Preparing to unpack .../02-fonts-dejavu-core_2.37-8_all.deb ...
147s Unpacking fonts-dejavu-core (2.37-8) ...
147s Selecting previously unselected package fontconfig-config.
147s Preparing to unpack .../03-fontconfig-config_2.15.0-2ubuntu1_s390x.deb ...
147s Unpacking fontconfig-config (2.15.0-2ubuntu1) ...
147s Selecting previously unselected package libfontconfig1:s390x.
147s Preparing to unpack .../04-libfontconfig1_2.15.0-2ubuntu1_s390x.deb ...
147s Unpacking libfontconfig1:s390x (2.15.0-2ubuntu1) ...
147s Selecting previously unselected package fontconfig.
147s Preparing to unpack .../05-fontconfig_2.15.0-2ubuntu1_s390x.deb ...
147s Unpacking fontconfig (2.15.0-2ubuntu1) ...
147s Selecting previously unselected package libblas3:s390x.
147s Preparing to unpack .../06-libblas3_3.12.1-2_s390x.deb ...
147s Unpacking libblas3:s390x (3.12.1-2) ...
147s Selecting previously unselected package libpixman-1-0:s390x.
147s Preparing to unpack .../07-libpixman-1-0_0.44.0-3_s390x.deb ...
147s Unpacking libpixman-1-0:s390x (0.44.0-3) ...
147s Selecting previously unselected package libxcb-render0:s390x.
147s Preparing to unpack .../08-libxcb-render0_1.17.0-2_s390x.deb ...
147s Unpacking libxcb-render0:s390x (1.17.0-2) ...
147s Selecting previously unselected package libxcb-shm0:s390x.
147s Preparing to unpack .../09-libxcb-shm0_1.17.0-2_s390x.deb ...
147s Unpacking libxcb-shm0:s390x (1.17.0-2) ...
147s Selecting previously unselected package libxrender1:s390x.
147s Preparing to unpack .../10-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ...
147s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ...
147s Selecting previously unselected package libcairo2:s390x.
147s Preparing to unpack .../11-libcairo2_1.18.2-2_s390x.deb ...
147s Unpacking libcairo2:s390x (1.18.2-2) ...
147s Selecting previously unselected package libdatrie1:s390x.
147s Preparing to unpack .../12-libdatrie1_0.2.13-3build1_s390x.deb ...
147s Unpacking libdatrie1:s390x (0.2.13-3build1) ...
147s Selecting previously unselected package libdeflate0:s390x.
147s Preparing to unpack .../13-libdeflate0_1.23-1_s390x.deb ...
147s Unpacking libdeflate0:s390x (1.23-1) ...
147s Selecting previously unselected package libgfortran5:s390x.
147s Preparing to unpack .../14-libgfortran5_15-20250213-1ubuntu1_s390x.deb ...
147s Unpacking libgfortran5:s390x (15-20250213-1ubuntu1) ...
147s Selecting previously unselected package libgomp1:s390x.
147s Preparing to unpack .../15-libgomp1_15-20250213-1ubuntu1_s390x.deb ...
147s Unpacking libgomp1:s390x (15-20250213-1ubuntu1) ...
147s Selecting previously unselected package libgraphite2-3:s390x.
147s Preparing to unpack .../16-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ...
147s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
147s Selecting previously unselected package libharfbuzz0b:s390x.
147s Preparing to unpack .../17-libharfbuzz0b_10.2.0-1_s390x.deb ...
147s Unpacking libharfbuzz0b:s390x (10.2.0-1) ...
147s Selecting previously unselected package x11-common.
147s Preparing to unpack .../18-x11-common_1%3a7.7+23ubuntu3_all.deb ...
147s Unpacking x11-common (1:7.7+23ubuntu3) ...
147s Selecting previously unselected package libice6:s390x.
147s Preparing to unpack .../19-libice6_2%3a1.1.1-1_s390x.deb ...
147s Unpacking libice6:s390x (2:1.1.1-1) ...
147s Selecting previously unselected package libjpeg-turbo8:s390x.
147s Preparing to unpack .../20-libjpeg-turbo8_2.1.5-3ubuntu2_s390x.deb ...
147s Unpacking libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ...
147s Selecting previously unselected package libjpeg8:s390x.
147s Preparing to unpack .../21-libjpeg8_8c-2ubuntu11_s390x.deb ...
147s Unpacking libjpeg8:s390x (8c-2ubuntu11) ...
147s Selecting previously unselected package liblapack3:s390x.
147s Preparing to unpack .../22-liblapack3_3.12.1-2_s390x.deb ...
147s Unpacking liblapack3:s390x (3.12.1-2) ...
147s Selecting previously unselected package libthai-data.
148s Preparing to unpack .../23-libthai-data_0.1.29-2build1_all.deb ...
148s Unpacking libthai-data (0.1.29-2build1) ...
148s Selecting previously unselected package libthai0:s390x.
148s Preparing to unpack .../24-libthai0_0.1.29-2build1_s390x.deb ...
148s Unpacking libthai0:s390x (0.1.29-2build1) ...
148s Selecting previously unselected package libpango-1.0-0:s390x.
148s Preparing to unpack .../25-libpango-1.0-0_1.56.1-1_s390x.deb ...
148s Unpacking libpango-1.0-0:s390x (1.56.1-1) ...
148s Selecting previously unselected package libpangoft2-1.0-0:s390x.
148s Preparing to unpack .../26-libpangoft2-1.0-0_1.56.1-1_s390x.deb ...
148s Unpacking libpangoft2-1.0-0:s390x (1.56.1-1) ...
148s Selecting previously unselected package libpangocairo-1.0-0:s390x.
148s Preparing to unpack .../27-libpangocairo-1.0-0_1.56.1-1_s390x.deb ...
148s Unpacking libpangocairo-1.0-0:s390x (1.56.1-1) ...
148s Selecting previously unselected package libpaper2:s390x.
148s Preparing to unpack .../28-libpaper2_2.2.5-0.3_s390x.deb ...
148s Unpacking libpaper2:s390x (2.2.5-0.3) ...
148s Selecting previously unselected package libpaper-utils.
148s Preparing to unpack .../29-libpaper-utils_2.2.5-0.3_s390x.deb ...
148s Unpacking libpaper-utils (2.2.5-0.3) ...
148s Selecting previously unselected package libsharpyuv0:s390x.
148s Preparing to unpack .../30-libsharpyuv0_1.5.0-0.1_s390x.deb ...
148s Unpacking libsharpyuv0:s390x (1.5.0-0.1) ...
148s Selecting previously unselected package libsm6:s390x.
148s Preparing to unpack .../31-libsm6_2%3a1.2.4-1_s390x.deb ...
148s Unpacking libsm6:s390x (2:1.2.4-1) ...
148s Selecting previously unselected package libtcl8.6:s390x.
148s Preparing to unpack .../32-libtcl8.6_8.6.16+dfsg-1_s390x.deb ...
148s Unpacking libtcl8.6:s390x (8.6.16+dfsg-1) ...
148s Selecting previously unselected package libjbig0:s390x.
148s Preparing to unpack .../33-libjbig0_2.1-6.1ubuntu2_s390x.deb ...
148s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ...
148s Selecting previously unselected package libwebp7:s390x.
148s Preparing to unpack .../34-libwebp7_1.5.0-0.1_s390x.deb ...
148s Unpacking libwebp7:s390x (1.5.0-0.1) ...
148s Selecting previously unselected package libtiff6:s390x.
148s Preparing to unpack .../35-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ...
148s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ...
148s Selecting previously unselected package libxft2:s390x.
148s Preparing to unpack .../36-libxft2_2.3.6-1build1_s390x.deb ...
148s Unpacking libxft2:s390x (2.3.6-1build1) ...
148s Selecting previously unselected package libxss1:s390x.
148s Preparing to unpack .../37-libxss1_1%3a1.2.3-1build3_s390x.deb ...
148s Unpacking libxss1:s390x (1:1.2.3-1build3) ...
148s Selecting previously unselected package libtk8.6:s390x.
148s Preparing to unpack .../38-libtk8.6_8.6.16-1_s390x.deb ...
148s Unpacking libtk8.6:s390x (8.6.16-1) ...
148s Selecting previously unselected package libxt6t64:s390x.
148s Preparing to unpack .../39-libxt6t64_1%3a1.2.1-1.2build1_s390x.deb ...
148s Unpacking libxt6t64:s390x (1:1.2.1-1.2build1) ...
148s Selecting previously unselected package zip.
148s Preparing to unpack .../40-zip_3.0-14ubuntu2_s390x.deb ...
148s Unpacking zip (3.0-14ubuntu2) ...
148s Selecting previously unselected package unzip.
148s Preparing to unpack .../41-unzip_6.0-28ubuntu6_s390x.deb ...
148s Unpacking unzip (6.0-28ubuntu6) ...
148s Selecting previously unselected package xdg-utils.
148s Preparing to unpack .../42-xdg-utils_1.2.1-2ubuntu1_all.deb ...
148s Unpacking xdg-utils (1.2.1-2ubuntu1) ...
148s Selecting previously unselected package r-base-core.
148s Preparing to unpack .../43-r-base-core_4.4.2-1build1_s390x.deb ...
148s Unpacking r-base-core (4.4.2-1build1) ...
148s Selecting previously unselected package r-cran-digest.
148s Preparing to unpack .../44-r-cran-digest_0.6.37-1_s390x.deb ...
148s Unpacking r-cran-digest (0.6.37-1) ...
148s Selecting previously unselected package r-cran-filehash.
148s Preparing to unpack .../45-r-cran-filehash_2.4-6-1_s390x.deb ...
148s Unpacking r-cran-filehash (2.4-6-1) ...
148s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
148s Setting up libpixman-1-0:s390x (0.44.0-3) ...
148s Setting up libsharpyuv0:s390x (1.5.0-0.1) ...
148s Setting up libxrender1:s390x (1:0.9.10-1.1build1) ...
148s Setting up libdatrie1:s390x (0.2.13-3build1) ...
148s Setting up libxcb-render0:s390x (1.17.0-2) ...
148s Setting up unzip (6.0-28ubuntu6) ...
148s Setting up x11-common (1:7.7+23ubuntu3) ...
148s Setting up libdeflate0:s390x (1.23-1) ...
148s Setting up libxcb-shm0:s390x (1.17.0-2) ...
148s Setting up libgomp1:s390x (15-20250213-1ubuntu1) ...
148s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ...
148s Setting up zip (3.0-14ubuntu2) ...
148s Setting up libblas3:s390x (3.12.1-2) ...
148s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
148s Setting up libfreetype6:s390x (2.13.3+dfsg-1) ...
148s Setting up fonts-dejavu-mono (2.37-8) ...
148s Setting up libtcl8.6:s390x (8.6.16+dfsg-1) ...
148s Setting up fonts-dejavu-core (2.37-8) ...
148s Setting up libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ...
148s Setting up libgfortran5:s390x (15-20250213-1ubuntu1) ...
148s Setting up libwebp7:s390x (1.5.0-0.1) ...
148s Setting up libharfbuzz0b:s390x (10.2.0-1) ...
148s Setting up libthai-data (0.1.29-2build1) ...
148s Setting up libxss1:s390x (1:1.2.3-1build3) ...
148s Setting up libpaper2:s390x (2.2.5-0.3) ...
148s Setting up xdg-utils (1.2.1-2ubuntu1) ...
148s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
148s Setting up libjpeg8:s390x (8c-2ubuntu11) ...
148s Setting up libice6:s390x (2:1.1.1-1) ...
148s Setting up liblapack3:s390x (3.12.1-2) ...
148s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
148s Setting up fontconfig-config (2.15.0-2ubuntu1) ...
149s Setting up libpaper-utils (2.2.5-0.3) ...
149s Setting up libthai0:s390x (0.1.29-2build1) ...
149s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu4) ...
149s Setting up libfontconfig1:s390x (2.15.0-2ubuntu1) ...
149s Setting up libsm6:s390x (2:1.2.4-1) ...
149s Setting up fontconfig (2.15.0-2ubuntu1) ...
151s Regenerating fonts cache... done.
151s Setting up libxft2:s390x (2.3.6-1build1) ...
151s Setting up libtk8.6:s390x (8.6.16-1) ...
151s Setting up libpango-1.0-0:s390x (1.56.1-1) ...
151s Setting up libcairo2:s390x (1.18.2-2) ...
151s Setting up libxt6t64:s390x (1:1.2.1-1.2build1) ...
151s Setting up libpangoft2-1.0-0:s390x (1.56.1-1) ...
151s Setting up libpangocairo-1.0-0:s390x (1.56.1-1) ...
151s Setting up r-base-core (4.4.2-1build1) ...
151s Creating config file /etc/R/Renviron with new version
151s Setting up r-cran-digest (0.6.37-1) ...
151s Setting up r-cran-filehash (2.4-6-1) ...
151s Processing triggers for man-db (2.13.0-1) ...
152s Processing triggers for install-info (7.1.1-1) ...
152s Processing triggers for libc-bin (2.40-4ubuntu1) ...
153s autopkgtest [04:44:52]: test run-unit-test: [-----------------------
153s --- digest.Rout.save_	2025-02-19 04:46:18.058181488 +0000
153s +++ digest.Rout_	2025-02-19 04:46:18.058181488 +0000
153s @@ -20,9 +20,9 @@
153s  > x <- 1:100
153s  > bytes <- serialize(x, NULL)
153s  > digest(bytes, algo = "sha1", skip = 14L, serialize = FALSE)
153s -[1] "d123cdcc2f8a32db324c172eb790b04907a9ed1d"
153s +[1] "2e5d89d6f1ad5d67bd241165d95c5f98112e98d4"
153s  > 
153s  > filehash:::sha1(x)
153s -[1] "d123cdcc2f8a32db324c172eb790b04907a9ed1d"
153s +[1] "2e5d89d6f1ad5d67bd241165d95c5f98112e98d4"
153s  > 
153s  > 
153s autopkgtest [04:44:52]: test run-unit-test: -----------------------]
154s autopkgtest [04:44:53]: test run-unit-test:  - - - - - - - - - - results - - - - - - - - - -
154s run-unit-test        FAIL non-zero exit status 1
154s autopkgtest [04:44:53]: test pkg-r-autopkgtest: preparing testbed
154s Reading package lists...
154s Building dependency tree...
154s Reading state information...
154s Starting pkgProblemResolver with broken count: 0
154s Starting 2 pkgProblemResolver with broken count: 0
154s Done
155s The following NEW packages will be installed:
155s   build-essential cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu
155s   dctrl-tools g++ g++-14 g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14
155s   gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-14
155s   gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools libasan8
155s   libblas-dev libbz2-dev libcc1-0 libdeflate-dev libgcc-14-dev
155s   libgfortran-14-dev libicu-dev libisl23 libitm1 libjpeg-dev
155s   libjpeg-turbo8-dev libjpeg8-dev liblapack-dev liblzma-dev libmpc3
155s   libncurses-dev libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3
155s   libpkgconf3 libpng-dev libreadline-dev libstdc++-14-dev libtirpc-dev
155s   libubsan1 pkg-r-autopkgtest pkgconf pkgconf-bin r-base-dev zlib1g-dev
155s 0 upgraded, 51 newly installed, 0 to remove and 0 not upgraded.
155s Need to get 82.2 MB of archives.
155s After this operation, 278 MB of additional disk space will be used.
155s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libisl23 s390x 0.27-1 [704 kB]
155s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB]
155s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-17ubuntu1 [9571 kB]
156s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14 s390x 14.2.0-17ubuntu1 [1030 B]
156s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [5556 B]
156s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x cpp s390x 4:14.2.0-1ubuntu1 [22.4 kB]
156s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libcc1-0 s390x 15-20250213-1ubuntu1 [49.2 kB]
156s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libitm1 s390x 15-20250213-1ubuntu1 [31.2 kB]
156s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libasan8 s390x 15-20250213-1ubuntu1 [2970 kB]
156s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libubsan1 s390x 15-20250213-1ubuntu1 [1213 kB]
156s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-14-dev s390x 14.2.0-17ubuntu1 [1037 kB]
156s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-17ubuntu1 [18.7 MB]
157s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14 s390x 14.2.0-17ubuntu1 [526 kB]
157s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1204 B]
157s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x gcc s390x 4:14.2.0-1ubuntu1 [5004 B]
157s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++-14-dev s390x 14.2.0-17ubuntu1 [2611 kB]
157s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-17ubuntu1 [11.0 MB]
157s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14 s390x 14.2.0-17ubuntu1 [21.8 kB]
157s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x g++-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [956 B]
157s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x g++ s390x 4:14.2.0-1ubuntu1 [1080 B]
157s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x build-essential s390x 12.10ubuntu1 [4930 B]
157s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x dctrl-tools s390x 2.24-3build3 [106 kB]
157s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran-14-dev s390x 14.2.0-17ubuntu1 [654 kB]
157s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14-s390x-linux-gnu s390x 14.2.0-17ubuntu1 [10.3 MB]
157s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14 s390x 14.2.0-17ubuntu1 [13.6 kB]
157s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1012 B]
157s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran s390x 4:14.2.0-1ubuntu1 [1160 B]
157s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x icu-devtools s390x 76.1-1ubuntu2 [225 kB]
157s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x libblas-dev s390x 3.12.1-2 [254 kB]
157s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libbz2-dev s390x 1.0.8-6 [39.1 kB]
157s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate-dev s390x 1.23-1 [52.2 kB]
157s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libicu-dev s390x 76.1-1ubuntu2 [12.2 MB]
158s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8-dev s390x 2.1.5-3ubuntu2 [281 kB]
158s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B]
158s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B]
158s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack-dev s390x 3.12.1-2 [5967 kB]
158s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libncurses-dev s390x 6.5+20250125-2 [407 kB]
158s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-16-0 s390x 10.42-4ubuntu3 [236 kB]
158s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-32-0 s390x 10.42-4ubuntu3 [221 kB]
158s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-posix3 s390x 10.42-4ubuntu3 [6820 B]
158s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-dev s390x 10.42-4ubuntu3 [815 kB]
158s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libpkgconf3 s390x 1.8.1-4 [31.2 kB]
158s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB]
158s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x libpng-dev s390x 1.6.46-4 [283 kB]
158s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libreadline-dev s390x 8.2-6 [187 kB]
158s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x liblzma-dev s390x 5.6.3-1 [183 kB]
158s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf-bin s390x 1.8.1-4 [21.5 kB]
158s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf s390x 1.8.1-4 [16.7 kB]
158s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x libtirpc-dev s390x 1.3.4+ds-1.3 [196 kB]
158s Get:50 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-dev all 4.4.2-1build1 [4342 B]
158s Get:51 http://ftpmaster.internal/ubuntu plucky/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
158s Fetched 82.2 MB in 3s (24.9 MB/s)
158s Selecting previously unselected package libisl23:s390x.
158s (Reading database ... 
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(Reading database ... 58197 files and directories currently installed.)
158s Preparing to unpack .../00-libisl23_0.27-1_s390x.deb ...
158s Unpacking libisl23:s390x (0.27-1) ...
158s Selecting previously unselected package libmpc3:s390x.
158s Preparing to unpack .../01-libmpc3_1.3.1-1build2_s390x.deb ...
158s Unpacking libmpc3:s390x (1.3.1-1build2) ...
158s Selecting previously unselected package cpp-14-s390x-linux-gnu.
158s Preparing to unpack .../02-cpp-14-s390x-linux-gnu_14.2.0-17ubuntu1_s390x.deb ...
158s Unpacking cpp-14-s390x-linux-gnu (14.2.0-17ubuntu1) ...
159s Selecting previously unselected package cpp-14.
159s Preparing to unpack .../03-cpp-14_14.2.0-17ubuntu1_s390x.deb ...
159s Unpacking cpp-14 (14.2.0-17ubuntu1) ...
159s Selecting previously unselected package cpp-s390x-linux-gnu.
159s Preparing to unpack .../04-cpp-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
159s Unpacking cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
159s Selecting previously unselected package cpp.
159s Preparing to unpack .../05-cpp_4%3a14.2.0-1ubuntu1_s390x.deb ...
159s Unpacking cpp (4:14.2.0-1ubuntu1) ...
159s Selecting previously unselected package libcc1-0:s390x.
159s Preparing to unpack .../06-libcc1-0_15-20250213-1ubuntu1_s390x.deb ...
159s Unpacking libcc1-0:s390x (15-20250213-1ubuntu1) ...
159s Selecting previously unselected package libitm1:s390x.
159s Preparing to unpack .../07-libitm1_15-20250213-1ubuntu1_s390x.deb ...
159s Unpacking libitm1:s390x (15-20250213-1ubuntu1) ...
159s Selecting previously unselected package libasan8:s390x.
159s Preparing to unpack .../08-libasan8_15-20250213-1ubuntu1_s390x.deb ...
159s Unpacking libasan8:s390x (15-20250213-1ubuntu1) ...
159s Selecting previously unselected package libubsan1:s390x.
159s Preparing to unpack .../09-libubsan1_15-20250213-1ubuntu1_s390x.deb ...
159s Unpacking libubsan1:s390x (15-20250213-1ubuntu1) ...
159s Selecting previously unselected package libgcc-14-dev:s390x.
159s Preparing to unpack .../10-libgcc-14-dev_14.2.0-17ubuntu1_s390x.deb ...
159s Unpacking libgcc-14-dev:s390x (14.2.0-17ubuntu1) ...
159s Selecting previously unselected package gcc-14-s390x-linux-gnu.
159s Preparing to unpack .../11-gcc-14-s390x-linux-gnu_14.2.0-17ubuntu1_s390x.deb ...
159s Unpacking gcc-14-s390x-linux-gnu (14.2.0-17ubuntu1) ...
159s Selecting previously unselected package gcc-14.
159s Preparing to unpack .../12-gcc-14_14.2.0-17ubuntu1_s390x.deb ...
159s Unpacking gcc-14 (14.2.0-17ubuntu1) ...
159s Selecting previously unselected package gcc-s390x-linux-gnu.
159s Preparing to unpack .../13-gcc-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
159s Unpacking gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
159s Selecting previously unselected package gcc.
159s Preparing to unpack .../14-gcc_4%3a14.2.0-1ubuntu1_s390x.deb ...
159s Unpacking gcc (4:14.2.0-1ubuntu1) ...
159s Selecting previously unselected package libstdc++-14-dev:s390x.
159s Preparing to unpack .../15-libstdc++-14-dev_14.2.0-17ubuntu1_s390x.deb ...
159s Unpacking libstdc++-14-dev:s390x (14.2.0-17ubuntu1) ...
159s Selecting previously unselected package g++-14-s390x-linux-gnu.
159s Preparing to unpack .../16-g++-14-s390x-linux-gnu_14.2.0-17ubuntu1_s390x.deb ...
159s Unpacking g++-14-s390x-linux-gnu (14.2.0-17ubuntu1) ...
159s Selecting previously unselected package g++-14.
159s Preparing to unpack .../17-g++-14_14.2.0-17ubuntu1_s390x.deb ...
159s Unpacking g++-14 (14.2.0-17ubuntu1) ...
159s Selecting previously unselected package g++-s390x-linux-gnu.
159s Preparing to unpack .../18-g++-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
159s Unpacking g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
159s Selecting previously unselected package g++.
159s Preparing to unpack .../19-g++_4%3a14.2.0-1ubuntu1_s390x.deb ...
159s Unpacking g++ (4:14.2.0-1ubuntu1) ...
159s Selecting previously unselected package build-essential.
159s Preparing to unpack .../20-build-essential_12.10ubuntu1_s390x.deb ...
159s Unpacking build-essential (12.10ubuntu1) ...
159s Selecting previously unselected package dctrl-tools.
159s Preparing to unpack .../21-dctrl-tools_2.24-3build3_s390x.deb ...
159s Unpacking dctrl-tools (2.24-3build3) ...
159s Selecting previously unselected package libgfortran-14-dev:s390x.
159s Preparing to unpack .../22-libgfortran-14-dev_14.2.0-17ubuntu1_s390x.deb ...
159s Unpacking libgfortran-14-dev:s390x (14.2.0-17ubuntu1) ...
159s Selecting previously unselected package gfortran-14-s390x-linux-gnu.
159s Preparing to unpack .../23-gfortran-14-s390x-linux-gnu_14.2.0-17ubuntu1_s390x.deb ...
159s Unpacking gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu1) ...
160s Selecting previously unselected package gfortran-14.
160s Preparing to unpack .../24-gfortran-14_14.2.0-17ubuntu1_s390x.deb ...
160s Unpacking gfortran-14 (14.2.0-17ubuntu1) ...
160s Selecting previously unselected package gfortran-s390x-linux-gnu.
160s Preparing to unpack .../25-gfortran-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
160s Unpacking gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
160s Selecting previously unselected package gfortran.
160s Preparing to unpack .../26-gfortran_4%3a14.2.0-1ubuntu1_s390x.deb ...
160s Unpacking gfortran (4:14.2.0-1ubuntu1) ...
160s Selecting previously unselected package icu-devtools.
160s Preparing to unpack .../27-icu-devtools_76.1-1ubuntu2_s390x.deb ...
160s Unpacking icu-devtools (76.1-1ubuntu2) ...
160s Selecting previously unselected package libblas-dev:s390x.
160s Preparing to unpack .../28-libblas-dev_3.12.1-2_s390x.deb ...
160s Unpacking libblas-dev:s390x (3.12.1-2) ...
160s Selecting previously unselected package libbz2-dev:s390x.
160s Preparing to unpack .../29-libbz2-dev_1.0.8-6_s390x.deb ...
160s Unpacking libbz2-dev:s390x (1.0.8-6) ...
160s Selecting previously unselected package libdeflate-dev:s390x.
160s Preparing to unpack .../30-libdeflate-dev_1.23-1_s390x.deb ...
160s Unpacking libdeflate-dev:s390x (1.23-1) ...
160s Selecting previously unselected package libicu-dev:s390x.
160s Preparing to unpack .../31-libicu-dev_76.1-1ubuntu2_s390x.deb ...
160s Unpacking libicu-dev:s390x (76.1-1ubuntu2) ...
160s Selecting previously unselected package libjpeg-turbo8-dev:s390x.
160s Preparing to unpack .../32-libjpeg-turbo8-dev_2.1.5-3ubuntu2_s390x.deb ...
160s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ...
160s Selecting previously unselected package libjpeg8-dev:s390x.
160s Preparing to unpack .../33-libjpeg8-dev_8c-2ubuntu11_s390x.deb ...
160s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ...
160s Selecting previously unselected package libjpeg-dev:s390x.
160s Preparing to unpack .../34-libjpeg-dev_8c-2ubuntu11_s390x.deb ...
160s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ...
160s Selecting previously unselected package liblapack-dev:s390x.
160s Preparing to unpack .../35-liblapack-dev_3.12.1-2_s390x.deb ...
160s Unpacking liblapack-dev:s390x (3.12.1-2) ...
160s Selecting previously unselected package libncurses-dev:s390x.
160s Preparing to unpack .../36-libncurses-dev_6.5+20250125-2_s390x.deb ...
160s Unpacking libncurses-dev:s390x (6.5+20250125-2) ...
160s Selecting previously unselected package libpcre2-16-0:s390x.
160s Preparing to unpack .../37-libpcre2-16-0_10.42-4ubuntu3_s390x.deb ...
160s Unpacking libpcre2-16-0:s390x (10.42-4ubuntu3) ...
160s Selecting previously unselected package libpcre2-32-0:s390x.
160s Preparing to unpack .../38-libpcre2-32-0_10.42-4ubuntu3_s390x.deb ...
160s Unpacking libpcre2-32-0:s390x (10.42-4ubuntu3) ...
160s Selecting previously unselected package libpcre2-posix3:s390x.
160s Preparing to unpack .../39-libpcre2-posix3_10.42-4ubuntu3_s390x.deb ...
160s Unpacking libpcre2-posix3:s390x (10.42-4ubuntu3) ...
160s Selecting previously unselected package libpcre2-dev:s390x.
160s Preparing to unpack .../40-libpcre2-dev_10.42-4ubuntu3_s390x.deb ...
160s Unpacking libpcre2-dev:s390x (10.42-4ubuntu3) ...
160s Selecting previously unselected package libpkgconf3:s390x.
160s Preparing to unpack .../41-libpkgconf3_1.8.1-4_s390x.deb ...
160s Unpacking libpkgconf3:s390x (1.8.1-4) ...
160s Selecting previously unselected package zlib1g-dev:s390x.
160s Preparing to unpack .../42-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_s390x.deb ...
160s Unpacking zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
160s Selecting previously unselected package libpng-dev:s390x.
160s Preparing to unpack .../43-libpng-dev_1.6.46-4_s390x.deb ...
160s Unpacking libpng-dev:s390x (1.6.46-4) ...
160s Selecting previously unselected package libreadline-dev:s390x.
160s Preparing to unpack .../44-libreadline-dev_8.2-6_s390x.deb ...
160s Unpacking libreadline-dev:s390x (8.2-6) ...
160s Selecting previously unselected package liblzma-dev:s390x.
160s Preparing to unpack .../45-liblzma-dev_5.6.3-1_s390x.deb ...
160s Unpacking liblzma-dev:s390x (5.6.3-1) ...
160s Selecting previously unselected package pkgconf-bin.
160s Preparing to unpack .../46-pkgconf-bin_1.8.1-4_s390x.deb ...
160s Unpacking pkgconf-bin (1.8.1-4) ...
160s Selecting previously unselected package pkgconf:s390x.
160s Preparing to unpack .../47-pkgconf_1.8.1-4_s390x.deb ...
160s Unpacking pkgconf:s390x (1.8.1-4) ...
160s Selecting previously unselected package libtirpc-dev:s390x.
160s Preparing to unpack .../48-libtirpc-dev_1.3.4+ds-1.3_s390x.deb ...
160s Unpacking libtirpc-dev:s390x (1.3.4+ds-1.3) ...
160s Selecting previously unselected package r-base-dev.
160s Preparing to unpack .../49-r-base-dev_4.4.2-1build1_all.deb ...
160s Unpacking r-base-dev (4.4.2-1build1) ...
160s Selecting previously unselected package pkg-r-autopkgtest.
160s Preparing to unpack .../50-pkg-r-autopkgtest_20231212ubuntu1_all.deb ...
160s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ...
160s Setting up libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ...
160s Setting up libncurses-dev:s390x (6.5+20250125-2) ...
160s Setting up libreadline-dev:s390x (8.2-6) ...
160s Setting up libpcre2-16-0:s390x (10.42-4ubuntu3) ...
160s Setting up libpcre2-32-0:s390x (10.42-4ubuntu3) ...
160s Setting up libtirpc-dev:s390x (1.3.4+ds-1.3) ...
160s Setting up libpkgconf3:s390x (1.8.1-4) ...
160s Setting up libmpc3:s390x (1.3.1-1build2) ...
160s Setting up icu-devtools (76.1-1ubuntu2) ...
160s Setting up pkgconf-bin (1.8.1-4) ...
160s Setting up liblzma-dev:s390x (5.6.3-1) ...
160s Setting up libubsan1:s390x (15-20250213-1ubuntu1) ...
160s Setting up zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
160s Setting up libpcre2-posix3:s390x (10.42-4ubuntu3) ...
160s Setting up libasan8:s390x (15-20250213-1ubuntu1) ...
160s Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ...
160s Setting up libisl23:s390x (0.27-1) ...
160s Setting up libdeflate-dev:s390x (1.23-1) ...
160s Setting up libicu-dev:s390x (76.1-1ubuntu2) ...
160s Setting up libcc1-0:s390x (15-20250213-1ubuntu1) ...
160s Setting up libblas-dev:s390x (3.12.1-2) ...
160s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so to provide /usr/lib/s390x-linux-gnu/libblas.so (libblas.so-s390x-linux-gnu) in auto mode
160s Setting up dctrl-tools (2.24-3build3) ...
160s Setting up libitm1:s390x (15-20250213-1ubuntu1) ...
160s Setting up libbz2-dev:s390x (1.0.8-6) ...
160s Setting up libpcre2-dev:s390x (10.42-4ubuntu3) ...
160s Setting up libpng-dev:s390x (1.6.46-4) ...
160s Setting up libjpeg-dev:s390x (8c-2ubuntu11) ...
160s Setting up pkgconf:s390x (1.8.1-4) ...
160s Setting up liblapack-dev:s390x (3.12.1-2) ...
160s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode
160s Setting up cpp-14-s390x-linux-gnu (14.2.0-17ubuntu1) ...
160s Setting up cpp-14 (14.2.0-17ubuntu1) ...
160s Setting up libgcc-14-dev:s390x (14.2.0-17ubuntu1) ...
160s Setting up libstdc++-14-dev:s390x (14.2.0-17ubuntu1) ...
160s Setting up libgfortran-14-dev:s390x (14.2.0-17ubuntu1) ...
160s Setting up cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
160s Setting up gcc-14-s390x-linux-gnu (14.2.0-17ubuntu1) ...
160s Setting up gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
160s Setting up g++-14-s390x-linux-gnu (14.2.0-17ubuntu1) ...
160s Setting up cpp (4:14.2.0-1ubuntu1) ...
160s Setting up gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu1) ...
160s Setting up g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
160s Setting up gcc-14 (14.2.0-17ubuntu1) ...
160s Setting up g++-14 (14.2.0-17ubuntu1) ...
160s Setting up gfortran-14 (14.2.0-17ubuntu1) ...
160s Setting up gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
160s Setting up gcc (4:14.2.0-1ubuntu1) ...
160s Setting up g++ (4:14.2.0-1ubuntu1) ...
160s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
160s Setting up build-essential (12.10ubuntu1) ...
160s Setting up gfortran (4:14.2.0-1ubuntu1) ...
160s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
160s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
160s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
160s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
160s Setting up r-base-dev (4.4.2-1build1) ...
160s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
160s Processing triggers for libc-bin (2.40-4ubuntu1) ...
160s Processing triggers for man-db (2.13.0-1) ...
161s Processing triggers for install-info (7.1.1-1) ...
162s autopkgtest [04:45:01]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
162s autopkgtest [04:45:01]: test pkg-r-autopkgtest: [-----------------------
162s Test: Try to load the R library filehash
162s 
162s R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
162s Copyright (C) 2024 The R Foundation for Statistical Computing
162s Platform: s390x-ibm-linux-gnu
162s 
162s R is free software and comes with ABSOLUTELY NO WARRANTY.
162s You are welcome to redistribute it under certain conditions.
162s Type 'license()' or 'licence()' for distribution details.
162s 
162s R is a collaborative project with many contributors.
162s Type 'contributors()' for more information and
162s 'citation()' on how to cite R or R packages in publications.
162s 
162s Type 'demo()' for some demos, 'help()' for on-line help, or
162s 'help.start()' for an HTML browser interface to help.
162s Type 'q()' to quit R.
162s 
162s > library('filehash')
162s filehash: Simple Key-Value Database (2.4-6)
162s > 
162s > 
162s Other tests are currently unsupported!
162s They will be progressively added.
163s autopkgtest [04:45:02]: test pkg-r-autopkgtest: -----------------------]
163s pkg-r-autopkgtest    PASS
163s autopkgtest [04:45:02]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
163s autopkgtest [04:45:02]: @@@@@@@@@@@@@@@@@@@@ summary
163s run-unit-test        FAIL non-zero exit status 1
163s pkg-r-autopkgtest    PASS
181s nova [W] Using flock in prodstack6-s390x
181s flock: timeout while waiting to get lock
181s Creating nova instance adt-plucky-s390x-r-cran-filehash-20250219-044219-juju-7f2275-prod-proposed-migration-environment-20-59f887a8-0ff0-4f3d-b921-15f842dc7f84 from image adt/ubuntu-plucky-s390x-server-20250218.img (UUID d4b3949f-1d31-4fe6-9e99-080adec067af)...
181s nova [W] Timed out waiting for 0faa4962-74c5-4ff3-b58d-73978c9a97b0 to get deleted.