0s autopkgtest: DBG: testbed init 0s autopkgtest [21:50:08]: starting date and time: 2025-02-03 21:50:08+0000 0s autopkgtest [21:50:08]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [21:50:08]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.juq5n6la/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-testthat --apt-upgrade r-cran-adegenet --debug --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-testthat/3.2.3-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-s390x-7.secgroup --name adt-plucky-s390x-r-cran-adegenet-20250203-215008-juju-7f2275-prod-proposed-migration-environment-15-f1dfa774-b888-43f1-9131-f7ed88d557e4 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 0s autopkgtest: DBG: got reply from testbed: ok 0s autopkgtest: DBG: testbed open, scratch=None 0s autopkgtest: DBG: sending command to testbed: open 50s autopkgtest: DBG: got reply from testbed: ok /tmp/autopkgtest.3p55QY 50s autopkgtest: DBG: sending command to testbed: print-execute-command 50s autopkgtest: DBG: got reply from testbed: ok /tmp/autopkgtest-ssh.kxwambb8/runcmd 50s autopkgtest: DBG: sending command to testbed: capabilities 50s autopkgtest: DBG: got reply from testbed: ok suggested-normal-user=ubuntu isolation-machine reboot revert revert-full-system root-on-testbed 50s autopkgtest: DBG: testbed capabilities: ['suggested-normal-user=ubuntu', 'isolation-machine', 'reboot', 'revert', 'revert-full-system', 'root-on-testbed', 'has_internet'] 50s autopkgtest: DBG: testbed command ['mkdir', '-p', '/tmp/autopkgtest.3p55QY'], kind short, sout raw, serr pipe, env [] 50s autopkgtest: DBG: testbed command exited with code 0 50s autopkgtest: DBG: sending command to testbed: copydown /home/ubuntu/autopkgtest/lib/in-testbed/wrapper.sh /tmp/autopkgtest.3p55QY/wrapper.sh 50s autopkgtest: DBG: got reply from testbed: ok 50s autopkgtest: DBG: testbed command ['chmod', '-R', '0755', '--', '/tmp/autopkgtest.3p55QY/wrapper.sh'], kind short, sout raw, serr pipe, env [] 51s autopkgtest: DBG: testbed command exited with code 0 51s autopkgtest: DBG: testbed command ['dpkg', '--print-architecture'], kind short, sout pipe, serr pipe, env [] 51s autopkgtest: DBG: testbed command exited with code 0 51s autopkgtest [21:50:59]: testbed dpkg architecture: s390x 51s autopkgtest: DBG: testbed command ['dpkg-query', '-W', '-f', '${Version}', 'apt'], kind short, sout pipe, serr pipe, env [] 51s autopkgtest: DBG: testbed command exited with code 0 51s autopkgtest [21:50:59]: testbed apt version: 2.9.18 51s autopkgtest: DBG: testbed command ['sh', '-ec', 'command -v eatmydata'], kind short, sout pipe, serr pipe, env [] 51s autopkgtest: DBG: testbed command exited with code 0 51s autopkgtest: DBG: testbed has eatmydata 51s autopkgtest: DBG: testbed command ['mkdir', '-p', '/etc/apt/preferences.d'], kind short, sout raw, serr pipe, env [] 51s autopkgtest: DBG: testbed command exited with code 0 51s autopkgtest [21:50:59]: @@@@@@@@@@@@@@@@@@@@ test bed setup 51s autopkgtest: DBG: testbed command ['sh', '-ec', '#!/bin/sh\n# Copyright © 2006-2018 Canonical Ltd.\n# Copyright © 2015-2017 Martin Pitt\n# Copyright © 2017 Steve Langasek\n# Copyright © 2017-2022 Paul Gevers\n# Copyright © 2018 Simon McVittie\n# SPDX-License-Identifier: GPL-2.0-or-later\n\n# This script returns the first suite found in apt sources. We can\'t just rely\n# on /etc/os-release because it doesn\'t allow to distinguish between Debian\n# unstable and testing.\n#\n# This release detection logic should be kept in sync with similar code in the\n# setup-testbed script.\n#\n# For more information on APT data sources see sources.list(5).\n\n# Usage $0\n\nset -eux\n\ndistro=UNKNOWN\nif [ -r /etc/os-release ]; then\n # shellcheck disable=SC1091\n distro=$(. /etc/os-release && echo "${ID:-$distro}")\nfi\n\n# Try guessing the default release from deb822-style format sources.\n#\n# While not mandatory, APT upstream expects distros to follow the\n# .sources naming pattern for the default deb822 sources.\napt_sources="/etc/apt/sources.list.d/$distro.sources"\nif [ -r "$apt_sources" ]; then\n release=$(sed -En \'s/^Suites:\\s*(\\w+).*/\\1/Ip\' "$apt_sources" | head -n1)\n [ -n "$release" ] && echo "$release" && exit\nfi\n\n# Try guessing the default release from one-line-style format sources.\napt_sources=/etc/apt/sources.list\nif [ -r "$apt_sources" ]; then\n release=$(sed -En \'/^(deb|deb-src) +(\\[.*\\] *)?(http|https|file):/ { s/\\[.*\\] +//; s/^[^ ]+ +[^ ]* +([^ ]+) +.*$/\\1/p }\' "$apt_sources" | head -n1)\n [ -n "$release" ] && echo "$release" && exit\nfi\n\n# Could not guess the default release\necho "Could not guess the default release from the APT sources." >&2\nexit 1\n'], kind short, sout pipe, serr pipe, env [] 51s autopkgtest: DBG: testbed command exited with code 0 51s autopkgtest [21:50:59]: testbed release detected to be: None 51s autopkgtest: DBG: testbed command ['sh', '-ec', '#!/bin/sh\n# SPDX-License-Identifier: GPL-2.0-or-later\n\n# This script returns the list of configured "deb" sources in one-line-style\n# source lists (/etc/apt/sources.list, /etc/apt/sources.list.d/*.list).\n# See sources.list(5) for more information on the APT source list formats.\n#\n# This script takes no arguments.\n\nset -eu\n\n# grep(1) returns 1 if no lines were selected from the input files, which\n# can happen if there are .list files, but they contain no "deb" entries.\n# We don\'t want to fail in this case, hence the "|| true", which we put\n# in a subshell because we want it to affect only the grep invocation.\n{\n if [ -f /etc/apt/sources.list ]; then\n printf \'%s\\0\' /etc/apt/sources.list\n fi\n if [ -d /etc/apt/sources.list.d ]; then\n find /etc/apt/sources.list.d -maxdepth 1 -type f -regex \'.*/[a-zA-Z0-9_.-]+\\.list\' -print0 \\\n | LC_ALL=C sort --zero-terminated\n fi\n} | xargs -0 --no-run-if-empty -- sh -c \'grep -h "^deb " "$@" || true\' "$(basename "$0")"\n'], kind short, sout pipe, serr pipe, env [] 52s autopkgtest: DBG: testbed command exited with code 0 52s autopkgtest: DBG: testbed command ['sh', '-ec', '#!/bin/sh\n# SPDX-License-Identifier: GPL-2.0-or-later\n\n# This script returns the list of configured sources in deb822-style source\n# lists (/etc/apt/sources.list.d/*.sources). Sources are not stripped out of\n# comments, extra blank lines or similar: the output of this script is meant to\n# be consumed by a deb822 parser that is able to correctly handle those.\n# See sources.list(5) for more information on the APT source list formats.\n#\n# This script takes no arguments.\n\nset -eu\n\n# Awk concatenates files making sure stanzas from separate files are separated\n# by a blank line, even if there are no newlines at EOF in the .sources files.\nif [ -d /etc/apt/sources.list.d ]; then\n find /etc/apt/sources.list.d -maxdepth 1 -type f -regex \'.*/[a-zA-Z0-9_.-]+\\.sources\' -print0 \\\n | LC_ALL=C sort --zero-terminated \\\n | xargs -0 --no-run-if-empty -- awk \'FNR == 1 && NR != 1 { print "" } { print }\'\nfi\n'], kind short, sout pipe, serr pipe, env [] 52s autopkgtest: DBG: testbed command exited with code 0 52s autopkgtest: DBG: adding APT source: Types: deb deb-src 52s URIs: http://ftpmaster.internal/ubuntu/ 52s Suites: plucky-proposed 52s Components: main restricted universe multiverse 52s Signed-By: /usr/share/keyrings/ubuntu-archive-keyring.gpg 52s autopkgtest: DBG: testbed command ['sh', '-ec', '"$@" >> "/etc/apt/sources.list.d/autopkgtest-add-apt-release-plucky-proposed.sources"', 'add_apt_source', 'printf', '%s\\n', 'Types: deb deb-src\nURIs: http://ftpmaster.internal/ubuntu/\nSuites: plucky-proposed\nComponents: main restricted universe multiverse\nSigned-By: /usr/share/keyrings/ubuntu-archive-keyring.gpg\n'], kind short, sout raw, serr pipe, env [] 52s autopkgtest: DBG: testbed command exited with code 0 52s autopkgtest: DBG: adding APT preference to autopkgtest-zz-plucky-proposed-baseline.pref: 52s Package: * 52s Pin: release plucky-proposed 52s Pin-Priority: 500 52s autopkgtest: DBG: testbed command ['sh', '-ec', '"$@" > "/etc/apt/preferences.d/autopkgtest-zz-plucky-proposed-baseline.pref"', 'add_apt_preference', 'printf', '%s\\n', 'Package: *\nPin: release plucky-proposed\nPin-Priority: 500'], kind short, sout raw, serr pipe, env [] 52s autopkgtest: DBG: testbed command exited with code 0 52s autopkgtest [21:51:00]: updating testbed package index (apt update) 52s autopkgtest: DBG: testbed command ['/bin/sh', '-ec', '"$@" 3>&2 2>&1', 'run_apt_command', '/usr/bin/eatmydata', 'apt-get', '--quiet', '--assume-yes', '-o=APT::Status-Fd=3', '-o=APT::Install-Recommends=false', '-o=Dpkg::Options::=--force-confnew', '-o=Debug::pkgProblemResolver=true', 'update'], kind install, sout raw, serr pipe, env ['DEBIAN_FRONTEND=noninteractive', 'APT_LISTBUGS_FRONTEND=none', 'APT_LISTCHANGES_FRONTEND=none'] 52s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [110 kB] 53s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 53s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 53s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 53s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [76.2 kB] 53s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [887 kB] 54s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [14.8 kB] 54s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [108 kB] 54s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [781 kB] 55s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3348 B] 55s Fetched 1981 kB in 2s (796 kB/s) 55s Reading package lists... 55s autopkgtest: DBG: testbed command exited with code 0 55s autopkgtest: DBG: adding APT preference to autopkgtest-plucky-proposed.pref: 55s Package: * 55s Pin: release plucky-proposed 55s Pin-Priority: 100 55s 55s Package: src:r-cran-testthat:any 55s Pin: release plucky-proposed 55s Pin-Priority: 995 55s autopkgtest: DBG: testbed command ['sh', '-ec', '"$@" > "/etc/apt/preferences.d/autopkgtest-plucky-proposed.pref"', 'add_apt_preference', 'printf', '%s\\n', 'Package: *\nPin: release plucky-proposed\nPin-Priority: 100\n\nPackage: src:r-cran-testthat:any\nPin: release plucky-proposed\nPin-Priority: 995'], kind short, sout raw, serr pipe, env [] 56s autopkgtest: DBG: testbed command exited with code 0 56s autopkgtest: DBG: testbed command ['bash', '-ec', 'for d in /boot /boot/efi /boot/grub /etc/init /etc/init.d /etc/systemd/system /lib/systemd/system; do [ ! -d $d ] || touch -r $d /tmp/autopkgtest.3p55QY/${d//\\//_}.stamp; done'], kind short, sout raw, serr pipe, env [] 56s autopkgtest: DBG: testbed command exited with code 0 56s autopkgtest: DBG: testbed command ['sh', '-ec', '#!/bin/sh\n# Canonical/Ubuntu specific testbed setup\n\nset -x\n\nRELEASE=$(lsb_release --codename --short 2>/dev/null)\n\n# Make the installed package versions match what is available from the configured\n# repositories, even if a downgrade is required.\n#\n# We may end up with images with packages newer than those available from the\n# repositories when opening a new release (images are created using the\n# previous release dailies as a base, which may include 0-day SRUs, or\n# Launchpad may fail to copy packages, see openssl 3.0.8-1ubuntu2), or when\n# package versions are pulled from the archive.\n#\n# Note: \'release a=\' matches the Suite field in the repository Release file.\ncat >/etc/apt/preferences.d/force-downgrade-to-release.pref <= Focal).\n#\n# Note: autoremove/--autoremove always runs on the entire set of installed\n# packages. Together with --autopurge/purge each removal becomes a purge.\n#\n# Removing \'?obsolete\' packages may remove the running kernel. This is not\n# expected to be an issue.\nif /usr/lib/apt/apt-helper analyze-pattern \'?true\' >/dev/null 2>&1; then\n # DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove \'?obsolete\'\n # Avoid removing the running kernel\n running_kernel_pattern="^linux-.*$(uname -r | sed \'s/\\./\\\\./g\').*"\n obsolete_pkgs="$(apt list \'?obsolete\' 2>/dev/null \\\n | tail -n+2 \\\n | cut -d\'/\' -f1 \\\n | grep -v "${running_kernel_pattern}" || true)"\n DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove ${obsolete_pkgs}\nelse\n # We\'re on an older release (analyze-pattern is not available).\n # Still do an autopurge to get rid of packages that got orphaned\n # by downgrades.\n eatmydata apt-get -y autoremove --purge\nfi\n\n# compatibility with old Jenkins testbeds for trusty\nif grep -q trusty /etc/lsb-release; then apt-get update || (sleep 10; apt-get update); apt-get install -y build-essential; fi\n\n# these packages really break tests, purge them if we use standard cloud images\n# (on lcy01)\nfor p in unattended-upgrades lxd lxd-client snapd; do\n [ ! -d /usr/share/doc/$p ] || $(which eatmydata || true) apt-get purge --auto-remove -y $p\ndone\n\nif type iptables >/dev/null 2>&1; then\n cat < /etc/rc.local\n#!/bin/sh\n\n# work around broken PTMU; LP: #1572026, RT#90771\niptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu || true\n\n# These addresses are used at least by rust-reqwest and should not be reachable\n# See https://bugs.launchpad.net/ubuntu/+source/rust-reqwest/+bug/2080346\niptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP || true\niptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP || true\nEOF\n chmod 755 /etc/rc.local\n # shellcheck disable=SC1091\n . /etc/rc.local\nfi\n\n# work around broken tty on ppc64el instances (LP: #1607075)\nif [ "$(uname -m)" = ppc64le ] && [ "$(systemctl is-active keyboard-setup.service 2>/dev/null|| true)" = failed ]; then\n systemctl reset-failed keyboard-setup.service\n systemctl mask keyboard-setup.service\nfi\n\n# work around late urandom pool initialization (LP: #1622893)\nif [ -d /run/systemd/system ] && systemd-detect-virt --quiet --vm; then\n mkdir -p /etc/systemd/system/systemd-random-seed.service.d/\n cat < /etc/systemd/system/systemd-random-seed.service.d/fakeentropy.conf\n[Service]\nExecStart=/usr/bin/perl -E \'open \\$\\$f, "/bin/bash" or die; open \\$\\$rnd, ">/dev/random" or die; for (\\$\\$i = 0; \\$\\$i < 10; ++\\$\\$i) {read \\$\\$f, \\$\\$d, 64; ioctl \\$\\$rnd, 0x40085203, pack("ii", 64*8, 64) . \\$\\$d}\'\nEOF\nfi\n\n# set compressor to lz4 where supported, we care about compression speed\nif grep -q lz4 /etc/initramfs-tools/initramfs.conf; then\n echo COMPRESS=lz4 > /etc/initramfs-tools/conf.d/lz4\nfi'], kind install, sout raw, serr raw, env ['AUTOPKGTEST_IS_SETUP_COMMAND=1', 'AUTOPKGTEST_NORMAL_USER=ubuntu', 'ADT_NORMAL_USER=ubuntu'] 56s + lsb_release --codename --short 56s + RELEASE=plucky 56s + cat 56s + [ plucky != trusty ] 56s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 56s Reading package lists... 56s Building dependency tree... 56s Reading state information... 56s Calculating upgrade... 56s The following packages were automatically installed and are no longer required: 56s linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic 56s linux-modules-6.11.0-8-generic linux-tools-6.11.0-8 56s linux-tools-6.11.0-8-generic 56s Use 'sudo apt autoremove' to remove them. 56s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 56s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 56s + /usr/lib/apt/apt-helper analyze-pattern ?true 56s + uname -r 56s + sed s/\./\\./g 56s + running_kernel_pattern=^linux-.*6\.12\.0-12-generic.* 56s + apt list ?obsolete 56s + tail -n+2 56s + cut -d/ -f1 56s + grep -v ^linux-.*6\.12\.0-12-generic.* 56s + true 56s + obsolete_pkgs= 56s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove 56s Reading package lists... 56s Building dependency tree... 56s Reading state information... 57s The following packages will be REMOVED: 57s linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 57s linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8* 57s linux-tools-6.11.0-8-generic* 57s 0 upgraded, 0 newly installed, 5 to remove and 0 not upgraded. 57s After this operation, 143 MB disk space will be freed. 57s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 80938 files and directories currently installed.) 57s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 57s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 58s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 58s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 58s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 58s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56531 files and directories currently installed.) 58s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 58s + grep -q trusty /etc/lsb-release 58s + [ ! -d /usr/share/doc/unattended-upgrades ] 58s + [ ! -d /usr/share/doc/lxd ] 58s + [ ! -d /usr/share/doc/lxd-client ] 58s + [ ! -d /usr/share/doc/snapd ] 58s + type iptables 58s + cat 58s + chmod 755 /etc/rc.local 58s + . /etc/rc.local 58s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 58s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 58s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 58s + uname -m 58s + [ s390x = ppc64le ] 58s + [ -d /run/systemd/system ] 58s + systemd-detect-virt --quiet --vm 58s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 58s + cat 58s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 58s + echo COMPRESS=lz4 58s autopkgtest: DBG: testbed command exited with code 0 58s autopkgtest [21:51:06]: upgrading testbed (apt dist-upgrade and autopurge) 58s autopkgtest: DBG: testbed command ['/bin/sh', '-ec', '"$@" 3>&2 2>&1', 'run_apt_command', '/usr/bin/eatmydata', 'apt-get', '--quiet', '--assume-yes', '-o=APT::Status-Fd=3', '-o=APT::Install-Recommends=false', '-o=Dpkg::Options::=--force-confnew', '-o=Debug::pkgProblemResolver=true', 'dist-upgrade'], kind install, sout raw, serr pipe, env ['DEBIAN_FRONTEND=noninteractive', 'APT_LISTBUGS_FRONTEND=none', 'APT_LISTCHANGES_FRONTEND=none'] 58s Reading package lists... 58s Building dependency tree... 58s Reading state information... 58s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 58s Starting 2 pkgProblemResolver with broken count: 0 58s Done 59s Entering ResolveByKeep 59s 59s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 59s autopkgtest: DBG: testbed command exited with code 0 59s autopkgtest: DBG: testbed command ['/bin/sh', '-ec', '"$@" 3>&2 2>&1', 'run_apt_command', '/usr/bin/eatmydata', 'apt-get', '--quiet', '--assume-yes', '-o=APT::Status-Fd=3', '-o=APT::Install-Recommends=false', '-o=Dpkg::Options::=--force-confnew', '-o=Debug::pkgProblemResolver=true', '--purge', 'autoremove'], kind install, sout raw, serr pipe, env ['DEBIAN_FRONTEND=noninteractive', 'APT_LISTBUGS_FRONTEND=none', 'APT_LISTCHANGES_FRONTEND=none'] 59s Reading package lists... 59s Building dependency tree... 59s Reading state information... 59s Starting pkgProblemResolver with broken count: 0 59s Starting 2 pkgProblemResolver with broken count: 0 59s Done 59s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 59s autopkgtest: DBG: testbed command exited with code 0 59s autopkgtest: DBG: testbed command ['bash', '-ec', '[ ! -e /run/autopkgtest_no_reboot.stamp ] || exit 0;for d in /boot /boot/efi /boot/grub /etc/init /etc/init.d /etc/systemd/system /lib/systemd/system; do s=/tmp/autopkgtest.3p55QY/${d//\\//_}.stamp; [ ! -d $d ] || [ `stat -c %Y $d` = `stat -c %Y $s` ]; done'], kind short, sout raw, serr raw, env [] 60s autopkgtest: DBG: testbed command exited with code 1 60s autopkgtest [21:51:08]: rebooting testbed after setup commands that affected boot 60s autopkgtest: DBG: sending command to testbed: reboot 79s autopkgtest: DBG: got reply from testbed: ok 79s autopkgtest: DBG: testbed supports reboot, creating /tmp/autopkgtest-reboot 79s autopkgtest: DBG: testbed command ['mkdir', '-p', '/tmp/autopkgtest.3p55QY'], kind short, sout raw, serr pipe, env [] 79s autopkgtest: DBG: testbed command exited with code 0 79s autopkgtest: DBG: sending command to testbed: copydown /home/ubuntu/autopkgtest/lib/in-testbed/reboot.sh /tmp/autopkgtest.3p55QY/autopkgtest-reboot 79s autopkgtest: DBG: got reply from testbed: ok 79s autopkgtest: DBG: testbed command ['chmod', '-R', '0755', '--', '/tmp/autopkgtest.3p55QY/autopkgtest-reboot'], kind short, sout raw, serr pipe, env [] 79s autopkgtest: DBG: testbed command exited with code 0 79s autopkgtest: DBG: testbed command ['ln', '-fns', '/tmp/autopkgtest.3p55QY/autopkgtest-reboot', '/tmp/autopkgtest-reboot'], kind short, sout raw, serr pipe, env [] 80s autopkgtest: DBG: testbed command exited with code 0 80s autopkgtest: DBG: testbed command ['ln', '-fns', '/tmp/autopkgtest.3p55QY/autopkgtest-reboot', '/sbin/autopkgtest-reboot'], kind short, sout raw, serr pipe, env [] 80s autopkgtest: DBG: testbed command exited with code 0 80s autopkgtest: DBG: testbed command ['mkdir', '-p', '/tmp/autopkgtest.3p55QY'], kind short, sout raw, serr pipe, env [] 81s autopkgtest: DBG: testbed command exited with code 0 81s autopkgtest: DBG: sending command to testbed: copydown /home/ubuntu/autopkgtest/lib/in-testbed/reboot-prepare.sh /tmp/autopkgtest.3p55QY/autopkgtest-reboot-prepare 81s autopkgtest: DBG: got reply from testbed: ok 81s autopkgtest: DBG: testbed command ['chmod', '-R', '0755', '--', '/tmp/autopkgtest.3p55QY/autopkgtest-reboot-prepare'], kind short, sout raw, serr pipe, env [] 81s autopkgtest: DBG: testbed command exited with code 0 81s autopkgtest: DBG: testbed command ['ln', '-fns', '/tmp/autopkgtest.3p55QY/autopkgtest-reboot-prepare', '/tmp/autopkgtest-reboot-prepare'], kind short, sout raw, serr pipe, env [] 82s autopkgtest: DBG: testbed command exited with code 0 82s autopkgtest: DBG: testbed command ['uname', '-srv'], kind short, sout pipe, serr pipe, env [] 82s autopkgtest: DBG: testbed command exited with code 0 82s autopkgtest [21:51:30]: testbed running kernel: Linux 6.12.0-12-generic #12-Ubuntu SMP Wed Jan 22 15:18:24 UTC 2025 82s autopkgtest: DBG: testbed command ['sh', '-c', 'nproc; cat /proc/cpuinfo 2>/dev/null || true'], kind short, sout pipe, serr pipe, env [] 83s autopkgtest: DBG: testbed command exited with code 0 83s autopkgtest: DBG: testbed command ['sh', '-ec', "dpkg-query --show -f '${Package}\\t${Version}\\n' > /tmp/autopkgtest.3p55QY/testbed-packages"], kind short, sout raw, serr pipe, env [] 83s autopkgtest: DBG: testbed command exited with code 0 83s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.3p55QY/testbed-packages /tmp/autopkgtest-work.juq5n6la/out/testbed-packages 84s autopkgtest: DBG: got reply from testbed: ok 84s autopkgtest: DBG: testbed supports reboot, creating /tmp/autopkgtest-reboot 84s autopkgtest: DBG: testbed command ['mkdir', '-p', '/tmp/autopkgtest.3p55QY'], kind short, sout raw, serr pipe, env [] 84s autopkgtest: DBG: testbed command exited with code 0 84s autopkgtest: DBG: sending command to testbed: copydown /home/ubuntu/autopkgtest/lib/in-testbed/reboot.sh /tmp/autopkgtest.3p55QY/autopkgtest-reboot 84s autopkgtest: DBG: got reply from testbed: ok 84s autopkgtest: DBG: testbed command ['chmod', '-R', '0755', '--', '/tmp/autopkgtest.3p55QY/autopkgtest-reboot'], kind short, sout raw, serr pipe, env [] 85s autopkgtest: DBG: testbed command exited with code 0 85s autopkgtest: DBG: testbed command ['ln', '-fns', '/tmp/autopkgtest.3p55QY/autopkgtest-reboot', '/tmp/autopkgtest-reboot'], kind short, sout raw, serr pipe, env [] 85s autopkgtest: DBG: testbed command exited with code 0 85s autopkgtest: DBG: testbed command ['ln', '-fns', '/tmp/autopkgtest.3p55QY/autopkgtest-reboot', '/sbin/autopkgtest-reboot'], kind short, sout raw, serr pipe, env [] 85s autopkgtest: DBG: testbed command exited with code 0 85s autopkgtest: DBG: testbed command ['mkdir', '-p', '/tmp/autopkgtest.3p55QY'], kind short, sout raw, serr pipe, env [] 86s autopkgtest: DBG: testbed command exited with code 0 86s autopkgtest: DBG: sending command to testbed: copydown /home/ubuntu/autopkgtest/lib/in-testbed/reboot-prepare.sh /tmp/autopkgtest.3p55QY/autopkgtest-reboot-prepare 86s autopkgtest: DBG: got reply from testbed: ok 86s autopkgtest: DBG: testbed command ['chmod', '-R', '0755', '--', '/tmp/autopkgtest.3p55QY/autopkgtest-reboot-prepare'], kind short, sout raw, serr pipe, env [] 86s autopkgtest: DBG: testbed command exited with code 0 86s autopkgtest: DBG: testbed command ['ln', '-fns', '/tmp/autopkgtest.3p55QY/autopkgtest-reboot-prepare', '/tmp/autopkgtest-reboot-prepare'], kind short, sout raw, serr pipe, env [] 86s autopkgtest: DBG: testbed command exited with code 0 86s autopkgtest: DBG: testbed command ['uname', '-srv'], kind short, sout pipe, serr pipe, env [] 87s autopkgtest: DBG: testbed command exited with code 0 87s autopkgtest: DBG: Binaries: initialising 87s autopkgtest [21:51:35]: @@@@@@@@@@@@@@@@@@@@ apt-source r-cran-adegenet 87s autopkgtest: DBG: blame += r-cran-adegenet 87s autopkgtest: DBG: testbed reset: modified=False, deps_installed=[], deps_new=[] 87s autopkgtest: DBG: testbed command ['apt-cache', 'showsrc', '--only-source', 'r-cran-adegenet'], kind short, sout pipe, serr pipe, env [] 87s autopkgtest: DBG: testbed command exited with code 0 87s autopkgtest: DBG: testbed command ['apt-cache', 'policy', '^r-cran-adegenet$'], kind short, sout pipe, serr raw, env [] 87s autopkgtest: DBG: testbed command exited with code 0 87s autopkgtest: DBG: testbed command ['apt-cache', 'show', 'r-cran-adegenet=2.1.10-1'], kind short, sout pipe, serr raw, env [] 88s autopkgtest: DBG: testbed command exited with code 0 88s autopkgtest: DBG: install_deps: deps_new=[] 88s autopkgtest: DBG: testbed command ['sh', '-ec', 'command -v dpkg-source'], kind short, sout pipe, serr pipe, env [] 88s autopkgtest: DBG: testbed command exited with code 0 88s autopkgtest: DBG: testbed command ['sh', '-ec', 'su --shell=/bin/sh ubuntu -c \'set -e; exec 3>&1 >&2; set -x; cd /; builddir=$(mktemp -d /tmp/autopkgtest.3p55QY/build.XXX); cd $builddir; OUT=$(apt-get source -d -q --only-source r-cran-adegenet=2.1.10-1 2>&1) || RC=$?;if [ -n "$RC" ]; then if echo "$OUT" | grep -q "Unable to find a source package"; then exit 1; else exit $RC; fi;fi;echo "$OUT" | grep ^Get: || true;dpkg-source -x r-cran-adegenet_*.dsc src >/dev/null; chmod -R a+rX .; cd [a-z0-9]*/.; pwd >&3; sed -n "1 {s/).*//; s/ (/\\n/; p}" debian/changelog >&3\''], kind build, sout pipe, serr raw, env ['ADT_TEST_TRIGGERS=r-cran-testthat/3.2.3-1'] 89s + cd / 89s + mktemp -d /tmp/autopkgtest.3p55QY/build.XXX 89s + builddir=/tmp/autopkgtest.3p55QY/build.RAV 89s + cd /tmp/autopkgtest.3p55QY/build.RAV 89s + apt-get source -d -q --only-source r-cran-adegenet=2.1.10-1 90s + OUT=Reading package lists... 90s NOTICE: 'r-cran-adegenet' packaging is maintained in the 'Git' version control system at: 90s https://salsa.debian.org/r-pkg-team/r-cran-adegenet.git 90s Please use: 90s git clone https://salsa.debian.org/r-pkg-team/r-cran-adegenet.git 90s to retrieve the latest (possibly unreleased) updates to the package. 90s Need to get 1708 kB of source archives. 90s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-adegenet 2.1.10-1 (dsc) [2280 B] 90s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-adegenet 2.1.10-1 (tar) [1701 kB] 90s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-adegenet 2.1.10-1 (diff) [4872 B] 90s Fetched 1708 kB in 1s (1390 kB/s) 90s Download complete and in download only mode 90s + [ -n ] 90s + grep ^Get: 90s + echo Reading package lists... 90s NOTICE: 'r-cran-adegenet' packaging is maintained in the 'Git' version control system at: 90s https://salsa.debian.org/r-pkg-team/r-cran-adegenet.git 90s Please use: 90s git clone https://salsa.debian.org/r-pkg-team/r-cran-adegenet.git 90s to retrieve the latest (possibly unreleased) updates to the package. 90s Need to get 1708 kB of source archives. 90s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-adegenet 2.1.10-1 (dsc) [2280 B] 90s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-adegenet 2.1.10-1 (tar) [1701 kB] 90s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-adegenet 2.1.10-1 (diff) [4872 B] 90s Fetched 1708 kB in 1s (1390 kB/s) 90s Download complete and in download only mode 90s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-cran-adegenet 2.1.10-1 (dsc) [2280 B] 90s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-cran-adegenet 2.1.10-1 (tar) [1701 kB] 90s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-cran-adegenet 2.1.10-1 (diff) [4872 B] 90s + dpkg-source -x r-cran-adegenet_2.1.10-1.dsc src 90s gpgv: Signature made Mon Jan 30 12:39:21 2023 UTC 90s gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 90s gpgv: issuer "tille@debian.org" 90s gpgv: Can't check signature: No public key 90s dpkg-source: warning: cannot verify inline signature for ./r-cran-adegenet_2.1.10-1.dsc: no acceptable signature found 90s + chmod -R a+rX . 90s + cd src/. 90s + pwd 90s + sed -n 1 {s/).*//; s/ (/\n/; p} debian/changelog 90s autopkgtest: DBG: testbed command exited with code 0 90s autopkgtest [21:51:38]: testing package r-cran-adegenet version 2.1.10-1 90s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.3p55QY/build.RAV/src/debian/ /tmp/autopkgtest-work.juq5n6la/out/pkg/debian/ 91s autopkgtest: DBG: got reply from testbed: ok 91s autopkgtest: DBG: autodep8 generated control: ----- 91s Tests: run-unit-test 91s Depends: @, r-cran-testthat 91s Restrictions: allow-stderr 91s 91s 91s Test-Command: /usr/share/dh-r/pkg-r-autopkgtest 91s Depends: @, pkg-r-autopkgtest, 91s Restrictions: allow-stderr, 91s Features: test-name=pkg-r-autopkgtest 91s 91s ------- 91s autopkgtest: DBG: processing dependency @ 91s autopkgtest: DBG: synthesised dependency r-cran-adegenet 91s autopkgtest: DBG: processing dependency r-cran-testthat 91s autopkgtest: DBG: Test defined: name run-unit-test path debian/tests/run-unit-test command "None" restrictions ['allow-stderr'] features [] depends ['r-cran-adegenet', 'r-cran-testthat'] 91s autopkgtest: DBG: processing dependency @ 91s autopkgtest: DBG: synthesised dependency r-cran-adegenet 91s autopkgtest: DBG: processing dependency pkg-r-autopkgtest 91s autopkgtest: DBG: Test defined: name pkg-r-autopkgtest path None command "/usr/share/dh-r/pkg-r-autopkgtest" restrictions ['allow-stderr'] features ['test-name=pkg-r-autopkgtest'] depends ['r-cran-adegenet', 'pkg-r-autopkgtest'] 91s autopkgtest [21:51:39]: build not needed 91s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.3p55QY/build.RAV/src/ /tmp/autopkgtest-work.juq5n6la/out/tests-tree/ 95s autopkgtest: DBG: got reply from testbed: ok 98s autopkgtest: DBG: autodep8 generated control: ----- 98s Tests: run-unit-test 98s Depends: @, r-cran-testthat 98s Restrictions: allow-stderr 98s 98s 98s Test-Command: /usr/share/dh-r/pkg-r-autopkgtest 98s Depends: @, r-cran-maps,r-cran-spdep,r-cran-interp,r-cran-testthat, pkg-r-autopkgtest, 98s Restrictions: allow-stderr, 98s Features: test-name=pkg-r-autopkgtest 98s 98s ------- 98s autopkgtest: DBG: processing dependency @ 98s autopkgtest: DBG: synthesised dependency r-cran-adegenet 98s autopkgtest: DBG: processing dependency r-cran-testthat 98s autopkgtest: DBG: Test defined: name run-unit-test path debian/tests/run-unit-test command "None" restrictions ['allow-stderr'] features [] depends ['r-cran-adegenet', 'r-cran-testthat'] 98s autopkgtest: DBG: processing dependency @ 98s autopkgtest: DBG: synthesised dependency r-cran-adegenet 98s autopkgtest: DBG: processing dependency r-cran-maps 98s autopkgtest: DBG: processing dependency r-cran-spdep 98s autopkgtest: DBG: processing dependency r-cran-interp 98s autopkgtest: DBG: processing dependency r-cran-testthat 98s autopkgtest: DBG: processing dependency pkg-r-autopkgtest 98s autopkgtest: DBG: Test defined: name pkg-r-autopkgtest path None command "/usr/share/dh-r/pkg-r-autopkgtest" restrictions ['allow-stderr'] features ['test-name=pkg-r-autopkgtest'] depends ['r-cran-adegenet', 'r-cran-maps', 'r-cran-spdep', 'r-cran-interp', 'r-cran-testthat', 'pkg-r-autopkgtest'] 98s autopkgtest [21:51:46]: test run-unit-test: preparing testbed 98s autopkgtest: DBG: testbed reset: modified=False, deps_installed=[], deps_new=['r-cran-adegenet', 'r-cran-testthat'] 98s autopkgtest: DBG: Binaries: no registered binaries, not publishing anything 98s autopkgtest: DBG: install_deps: deps_new=['r-cran-adegenet', 'r-cran-testthat'] 98s autopkgtest: DBG: install-deps: satisfying r-cran-adegenet, r-cran-testthat 98s autopkgtest: DBG: can use apt-get on testbed: True 98s autopkgtest: DBG: testbed command ['/bin/sh', '-ec', '"$@" 3>&2 2>&1', 'run_apt_command', '/usr/bin/eatmydata', 'apt-get', '--quiet', '--assume-yes', '-o=APT::Status-Fd=3', '-o=APT::Install-Recommends=false', '-o=Dpkg::Options::=--force-confnew', '-o=Debug::pkgProblemResolver=true', 'satisfy', 'r-cran-adegenet, r-cran-testthat'], kind install, sout raw, serr pipe, env ['DEBIAN_FRONTEND=noninteractive', 'APT_LISTBUGS_FRONTEND=none', 'APT_LISTCHANGES_FRONTEND=none'] 98s Reading package lists... 98s Building dependency tree... 98s Reading state information... 99s Starting pkgProblemResolver with broken count: 0 99s Starting 2 pkgProblemResolver with broken count: 0 99s Done 99s The following NEW packages will be installed: 99s fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 99s fonts-font-awesome fonts-glyphicons-halflings javascript-common libamd3 99s libblas3 libcairo2 libcolamd3 libdatrie1 libdeflate0 libfontconfig1 99s libfreetype6 libgfortran5 libglpk40 libgomp1 libgraphite2-3 libharfbuzz0b 99s libice6 libjbig0 libjpeg-turbo8 libjpeg8 libjs-bootstrap libjs-bootstrap4 99s libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 99s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 99s libjs-microplugin.js libjs-popper.js libjs-sifter.js 99s libjs-twitter-bootstrap-datepicker liblapack3 libltdl7 libpango-1.0-0 99s libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libpixman-1-0 99s libsharpyuv0 libsm6 libsuitesparseconfig7 libtcl8.6 libthai-data libthai0 99s libtiff6 libtk8.6 libwebp7 libxcb-render0 libxcb-shm0 libxft2 libxrender1 99s libxss1 libxt6t64 littler node-bootstrap-sass node-html5shiv 99s node-normalize.css r-base-core r-cran-ade4 r-cran-adegenet r-cran-ape 99s r-cran-base64enc r-cran-boot r-cran-brio r-cran-bslib r-cran-cachem 99s r-cran-callr r-cran-cli r-cran-cluster r-cran-colorspace r-cran-commonmark 99s r-cran-cpp11 r-cran-crayon r-cran-desc r-cran-diffobj r-cran-digest 99s r-cran-dplyr r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastmap 99s r-cran-fontawesome r-cran-fs r-cran-generics r-cran-ggplot2 r-cran-glue 99s r-cran-gtable r-cran-htmltools r-cran-httpuv r-cran-igraph r-cran-isoband 99s r-cran-jquerylib r-cran-jsonlite r-cran-labeling r-cran-later r-cran-lattice 99s r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix 99s r-cran-memoise r-cran-mgcv r-cran-mime r-cran-munsell r-cran-nlme 99s r-cran-permute r-cran-pillar r-cran-pixmap r-cran-pkgbuild r-cran-pkgconfig 99s r-cran-pkgkitten r-cran-pkgload r-cran-plyr r-cran-praise r-cran-processx 99s r-cran-promises r-cran-ps r-cran-r6 r-cran-rappdirs r-cran-rcolorbrewer 99s r-cran-rcpp r-cran-rcpparmadillo r-cran-reshape2 r-cran-rlang 99s r-cran-rprojroot r-cran-sass r-cran-scales r-cran-segmented r-cran-seqinr 99s r-cran-shiny r-cran-sourcetools r-cran-sp r-cran-stringi r-cran-stringr 99s r-cran-testthat r-cran-tibble r-cran-tidyselect r-cran-utf8 r-cran-vctrs 99s r-cran-vegan r-cran-viridislite r-cran-waldo r-cran-withr r-cran-xtable 99s unzip x11-common xdg-utils zip 99s 0 upgraded, 157 newly installed, 0 to remove and 0 not upgraded. 99s Need to get 127 MB of archives. 99s After this operation, 250 MB of additional disk space will be used. 99s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB] 100s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 101s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 111s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-1.1ubuntu2 [37.4 kB] 112s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-1.1ubuntu2 [150 kB] 114s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig s390x 2.15.0-1.1ubuntu2 [191 kB] 116s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 122s Get:8 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 125s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x javascript-common all 11+nmu1 [5936 B] 125s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 14.2.0-13ubuntu1 [151 kB] 127s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libsuitesparseconfig7 s390x 1:7.8.3+dfsg-2 [13.1 kB] 127s Get:12 http://ftpmaster.internal/ubuntu plucky/universe s390x libamd3 s390x 1:7.8.3+dfsg-2 [35.1 kB] 128s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.0-4 [238 kB] 131s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB] 133s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB] 133s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B] 133s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB] 133s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB] 141s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x libcolamd3 s390x 1:7.8.3+dfsg-2 [23.4 kB] 141s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB] 142s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.23-1 [46.1 kB] 143s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 14.2.0-13ubuntu1 [588 kB] 149s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x libltdl7 s390x 2.5.4-2.1 [43.8 kB] 150s Get:24 http://ftpmaster.internal/ubuntu plucky/universe s390x libglpk40 s390x 5.0-1build2 [406 kB] 156s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB] 157s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB] 162s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB] 162s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB] 162s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB] 164s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 164s Get:31 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 166s Get:32 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 166s Get:33 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 174s Get:34 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-d3 all 3.5.17-4 [132 kB] 177s Get:35 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-es5-shim all 4.6.7-2 [39.8 kB] 177s Get:36 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 184s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 187s Get:38 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 190s Get:39 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 191s Get:40 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 191s Get:41 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 191s Get:42 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 196s Get:43 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 196s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.0-4 [2964 kB] 236s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libthai-data all 0.1.29-2build1 [158 kB] 243s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB] 244s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x libpango-1.0-0 s390x 1.56.1-1 [253 kB] 248s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x libpangoft2-1.0-0 s390x 1.56.1-1 [50.3 kB] 249s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x libpangocairo-1.0-0 s390x 1.56.1-1 [28.3 kB] 249s Get:50 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB] 249s Get:51 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB] 249s Get:52 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB] 250s Get:53 http://ftpmaster.internal/ubuntu plucky/main s390x libsm6 s390x 2:1.2.4-1 [18.4 kB] 250s Get:54 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB] 267s Get:55 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB] 267s Get:56 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB] 269s Get:57 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB] 271s Get:58 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB] 271s Get:59 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B] 271s Get:60 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.16-1 [830 kB] 279s Get:61 http://ftpmaster.internal/ubuntu plucky/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB] 281s Get:62 http://ftpmaster.internal/ubuntu plucky/main s390x zip s390x 3.0-14ubuntu2 [187 kB] 282s Get:63 http://ftpmaster.internal/ubuntu plucky/main s390x unzip s390x 6.0-28ubuntu6 [186 kB] 284s Get:64 http://ftpmaster.internal/ubuntu plucky/main s390x xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 284s Get:65 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-core s390x 4.4.2-1build1 [28.6 MB] 679s Get:66 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-littler s390x 0.3.20-2 [95.0 kB] 680s Get:67 http://ftpmaster.internal/ubuntu plucky/universe s390x littler all 0.3.20-2 [2554 B] 680s Get:68 http://ftpmaster.internal/ubuntu plucky/universe s390x node-bootstrap-sass all 3.4.3-2 [187 kB] 682s Get:69 http://ftpmaster.internal/ubuntu plucky/universe s390x node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 682s Get:70 http://ftpmaster.internal/ubuntu plucky/universe s390x node-normalize.css all 8.0.1-5 [10.8 kB] 683s Get:71 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mass s390x 7.3-64-1 [1113 kB] 698s Get:72 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pixmap all 0.4-13-1 [213 kB] 700s Get:73 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lattice s390x 0.22-6-1 [1340 kB] 719s Get:74 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sp s390x 1:2.1-4+dfsg-1 [1472 kB] 736s Get:75 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 736s Get:76 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcpp s390x 1.0.14-1 [2003 kB] 759s Get:77 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcpparmadillo s390x 14.2.2-1-1 [851 kB] 770s Get:78 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ade4 s390x 1.7-22-1 [5338 kB] 828s Get:79 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cli s390x 3.6.3-1 [1349 kB] 833s Get:80 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-glue s390x 1.8.0-1 [164 kB] 833s Get:81 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rlang s390x 1.1.5-1 [1713 kB] 833s Get:82 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 833s Get:83 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB] 833s Get:84 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-matrix s390x 1.7-2-1 [4441 kB] 833s Get:85 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 833s Get:86 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB] 834s Get:87 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cpp11 all 0.5.1-1 [233 kB] 834s Get:88 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-igraph s390x 2.1.4-1 [5311 kB] 834s Get:89 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-nlme s390x 3.1.167-1 [2323 kB] 835s Get:90 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-digest s390x 0.6.37-1 [205 kB] 835s Get:91 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ape s390x 5.8-1-1 [2921 kB] 835s Get:92 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-later s390x 1.4.1+dfsg-1 [148 kB] 836s Get:93 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fastmap s390x 1.2.0-1 [72.4 kB] 836s Get:94 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r6 all 2.5.1-1 [99.0 kB] 836s Get:95 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-promises s390x 1.3.2+dfsg-1 [296 kB] 836s Get:96 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-httpuv s390x 1.6.15+dfsg-1 [507 kB] 836s Get:97 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mime s390x 0.12-2 [35.8 kB] 836s Get:98 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-jsonlite s390x 1.8.9+dfsg-1 [447 kB] 836s Get:99 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-xtable all 1:1.8-4-2 [689 kB] 836s Get:100 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-base64enc s390x 0.1-3-3 [28.0 kB] 836s Get:101 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-htmltools s390x 0.5.8.1-1 [372 kB] 836s Get:102 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fontawesome all 0.5.3-1 [1331 kB] 836s Get:103 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sourcetools s390x 0.1.7-1-1 [47.1 kB] 836s Get:104 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-crayon all 1.5.3-1 [165 kB] 836s Get:105 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-withr all 3.0.2+dfsg-1 [214 kB] 836s Get:106 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-commonmark s390x 1.9.2-2 [142 kB] 836s Get:107 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cachem s390x 1.1.0-1 [74.0 kB] 836s Get:108 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 837s Get:109 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-memoise all 2.0.1-1 [53.9 kB] 837s Get:110 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fs s390x 1.6.5+dfsg-1 [245 kB] 837s Get:111 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rappdirs s390x 0.3.3-1 [47.5 kB] 837s Get:112 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sass s390x 0.4.9+dfsg-1 [1019 kB] 837s Get:113 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 837s Get:114 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 837s Get:115 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-shiny all 1.9.1+dfsg-1 [3111 kB] 837s Get:116 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-gtable all 0.3.6+dfsg-1 [199 kB] 837s Get:117 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-isoband s390x 0.2.7-1 [1481 kB] 838s Get:118 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mgcv s390x 1.9-1-1 [3348 kB] 838s Get:119 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-farver s390x 2.1.2-1 [1353 kB] 838s Get:120 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-labeling all 0.4.3-1 [62.1 kB] 838s Get:121 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-colorspace s390x 2.1-1+dfsg-1 [1567 kB] 838s Get:122 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-munsell all 0.5.1-1 [213 kB] 838s Get:123 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB] 838s Get:124 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-viridislite all 0.4.2-2 [1088 kB] 838s Get:125 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-scales all 1.3.0-1 [603 kB] 838s Get:126 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fansi s390x 1.0.5-1 [615 kB] 838s Get:127 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB] 839s Get:128 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 839s Get:129 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tibble s390x 3.2.1+dfsg-3 [420 kB] 839s Get:130 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB] 839s Get:131 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-segmented all 2.1-3-1 [1366 kB] 839s Get:132 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-seqinr s390x 4.2-36-1 [4019 kB] 839s Get:133 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-boot all 1.3-31-1 [635 kB] 839s Get:134 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-plyr s390x 1.8.9-1 [835 kB] 839s Get:135 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-stringi s390x 1.8.4-1build1 [917 kB] 839s Get:136 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-stringr all 1.5.1-1 [290 kB] 840s Get:137 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-reshape2 s390x 1.4.4-2build1 [111 kB] 840s Get:138 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-generics all 0.1.3-1 [81.3 kB] 840s Get:139 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tidyselect s390x 1.2.1+dfsg-1 [222 kB] 840s Get:140 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-dplyr s390x 1.1.4-4 [1537 kB] 840s Get:141 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-permute all 0.9-7-1 [228 kB] 840s Get:142 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cluster s390x 2.1.8-1 [577 kB] 840s Get:143 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-vegan s390x 2.6-8+dfsg-1 [3143 kB] 840s Get:144 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-adegenet s390x 2.1.10-1 [2709 kB] 840s Get:145 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-brio s390x 1.1.5-1 [38.6 kB] 840s Get:146 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ps s390x 1.8.1-1 [395 kB] 840s Get:147 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-processx s390x 3.8.5-1 [354 kB] 841s Get:148 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-callr all 3.7.6-1 [458 kB] 841s Get:149 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-desc all 1.4.3-1 [359 kB] 841s Get:150 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-diffobj s390x 0.3.5-1 [1115 kB] 841s Get:151 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-evaluate all 1.0.3-1 [114 kB] 841s Get:152 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgbuild all 1.4.6-1 [213 kB] 841s Get:153 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rprojroot all 2.0.4-2 [125 kB] 841s Get:154 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgload all 1.4.0-1 [247 kB] 841s Get:155 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-praise all 1.0.0-4build1 [20.3 kB] 841s Get:156 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-waldo all 0.6.1-1 [150 kB] 841s Get:157 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x r-cran-testthat s390x 3.2.3-1 [1641 kB] 842s Preconfiguring packages ... 842s Fetched 127 MB in 12min 23s (171 kB/s) 842s Selecting previously unselected package libfreetype6:s390x. 842s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56531 files and directories currently installed.) 842s Preparing to unpack .../000-libfreetype6_2.13.3+dfsg-1_s390x.deb ... 842s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ... 842s Selecting previously unselected package fonts-dejavu-mono. 842s Preparing to unpack .../001-fonts-dejavu-mono_2.37-8_all.deb ... 842s Unpacking fonts-dejavu-mono (2.37-8) ... 842s Selecting previously unselected package fonts-dejavu-core. 842s Preparing to unpack .../002-fonts-dejavu-core_2.37-8_all.deb ... 842s Unpacking fonts-dejavu-core (2.37-8) ... 842s Selecting previously unselected package fontconfig-config. 842s Preparing to unpack .../003-fontconfig-config_2.15.0-1.1ubuntu2_s390x.deb ... 842s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 842s Selecting previously unselected package libfontconfig1:s390x. 842s Preparing to unpack .../004-libfontconfig1_2.15.0-1.1ubuntu2_s390x.deb ... 842s Unpacking libfontconfig1:s390x (2.15.0-1.1ubuntu2) ... 842s Selecting previously unselected package fontconfig. 842s Preparing to unpack .../005-fontconfig_2.15.0-1.1ubuntu2_s390x.deb ... 842s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 842s Selecting previously unselected package fonts-font-awesome. 842s Preparing to unpack .../006-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 842s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 842s Selecting previously unselected package fonts-glyphicons-halflings. 842s Preparing to unpack .../007-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 842s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 842s Selecting previously unselected package javascript-common. 842s Preparing to unpack .../008-javascript-common_11+nmu1_all.deb ... 842s Unpacking javascript-common (11+nmu1) ... 842s Selecting previously unselected package libgomp1:s390x. 842s Preparing to unpack .../009-libgomp1_14.2.0-13ubuntu1_s390x.deb ... 842s Unpacking libgomp1:s390x (14.2.0-13ubuntu1) ... 842s Selecting previously unselected package libsuitesparseconfig7:s390x. 842s Preparing to unpack .../010-libsuitesparseconfig7_1%3a7.8.3+dfsg-2_s390x.deb ... 842s Unpacking libsuitesparseconfig7:s390x (1:7.8.3+dfsg-2) ... 842s Selecting previously unselected package libamd3:s390x. 842s Preparing to unpack .../011-libamd3_1%3a7.8.3+dfsg-2_s390x.deb ... 842s Unpacking libamd3:s390x (1:7.8.3+dfsg-2) ... 842s Selecting previously unselected package libblas3:s390x. 842s Preparing to unpack .../012-libblas3_3.12.0-4_s390x.deb ... 842s Unpacking libblas3:s390x (3.12.0-4) ... 842s Selecting previously unselected package libpixman-1-0:s390x. 842s Preparing to unpack .../013-libpixman-1-0_0.44.0-3_s390x.deb ... 842s Unpacking libpixman-1-0:s390x (0.44.0-3) ... 842s Selecting previously unselected package libxcb-render0:s390x. 842s Preparing to unpack .../014-libxcb-render0_1.17.0-2_s390x.deb ... 842s Unpacking libxcb-render0:s390x (1.17.0-2) ... 842s Selecting previously unselected package libxcb-shm0:s390x. 842s Preparing to unpack .../015-libxcb-shm0_1.17.0-2_s390x.deb ... 842s Unpacking libxcb-shm0:s390x (1.17.0-2) ... 842s Selecting previously unselected package libxrender1:s390x. 842s Preparing to unpack .../016-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ... 842s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ... 842s Selecting previously unselected package libcairo2:s390x. 842s Preparing to unpack .../017-libcairo2_1.18.2-2_s390x.deb ... 842s Unpacking libcairo2:s390x (1.18.2-2) ... 842s Selecting previously unselected package libcolamd3:s390x. 842s Preparing to unpack .../018-libcolamd3_1%3a7.8.3+dfsg-2_s390x.deb ... 842s Unpacking libcolamd3:s390x (1:7.8.3+dfsg-2) ... 842s Selecting previously unselected package libdatrie1:s390x. 842s Preparing to unpack .../019-libdatrie1_0.2.13-3build1_s390x.deb ... 842s Unpacking libdatrie1:s390x (0.2.13-3build1) ... 842s Selecting previously unselected package libdeflate0:s390x. 842s Preparing to unpack .../020-libdeflate0_1.23-1_s390x.deb ... 842s Unpacking libdeflate0:s390x (1.23-1) ... 842s Selecting previously unselected package libgfortran5:s390x. 842s Preparing to unpack .../021-libgfortran5_14.2.0-13ubuntu1_s390x.deb ... 842s Unpacking libgfortran5:s390x (14.2.0-13ubuntu1) ... 842s Selecting previously unselected package libltdl7:s390x. 842s Preparing to unpack .../022-libltdl7_2.5.4-2.1_s390x.deb ... 842s Unpacking libltdl7:s390x (2.5.4-2.1) ... 842s Selecting previously unselected package libglpk40:s390x. 842s Preparing to unpack .../023-libglpk40_5.0-1build2_s390x.deb ... 842s Unpacking libglpk40:s390x (5.0-1build2) ... 842s Selecting previously unselected package libgraphite2-3:s390x. 842s Preparing to unpack .../024-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ... 842s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 842s Selecting previously unselected package libharfbuzz0b:s390x. 842s Preparing to unpack .../025-libharfbuzz0b_10.2.0-1_s390x.deb ... 842s Unpacking libharfbuzz0b:s390x (10.2.0-1) ... 842s Selecting previously unselected package x11-common. 842s Preparing to unpack .../026-x11-common_1%3a7.7+23ubuntu3_all.deb ... 842s Unpacking x11-common (1:7.7+23ubuntu3) ... 842s Selecting previously unselected package libice6:s390x. 842s Preparing to unpack .../027-libice6_2%3a1.1.1-1_s390x.deb ... 842s Unpacking libice6:s390x (2:1.1.1-1) ... 842s Selecting previously unselected package libjpeg-turbo8:s390x. 842s Preparing to unpack .../028-libjpeg-turbo8_2.1.5-3ubuntu2_s390x.deb ... 842s Unpacking libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ... 842s Selecting previously unselected package libjpeg8:s390x. 842s Preparing to unpack .../029-libjpeg8_8c-2ubuntu11_s390x.deb ... 842s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 842s Selecting previously unselected package libjs-bootstrap. 842s Preparing to unpack .../030-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 842s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 842s Selecting previously unselected package libjs-popper.js. 842s Preparing to unpack .../031-libjs-popper.js_1.16.1+ds-6_all.deb ... 842s Unpacking libjs-popper.js (1.16.1+ds-6) ... 842s Selecting previously unselected package libjs-bootstrap4. 842s Preparing to unpack .../032-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 842s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 842s Selecting previously unselected package libjs-d3. 842s Preparing to unpack .../033-libjs-d3_3.5.17-4_all.deb ... 842s Unpacking libjs-d3 (3.5.17-4) ... 842s Selecting previously unselected package libjs-es5-shim. 842s Preparing to unpack .../034-libjs-es5-shim_4.6.7-2_all.deb ... 842s Unpacking libjs-es5-shim (4.6.7-2) ... 842s Selecting previously unselected package libjs-highlight.js. 842s Preparing to unpack .../035-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 842s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 842s Selecting previously unselected package libjs-jquery. 842s Preparing to unpack .../036-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 842s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 842s Selecting previously unselected package libjs-jquery-datatables. 842s Preparing to unpack .../037-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 842s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 842s Selecting previously unselected package libjs-sifter.js. 842s Preparing to unpack .../038-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 842s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 842s Selecting previously unselected package libjs-microplugin.js. 842s Preparing to unpack .../039-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 842s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 842s Selecting previously unselected package libjs-jquery-selectize.js. 842s Preparing to unpack .../040-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 842s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 843s Selecting previously unselected package libjs-jquery-ui. 843s Preparing to unpack .../041-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 843s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 843s Selecting previously unselected package libjs-json. 843s Preparing to unpack .../042-libjs-json_0~20221030+~1.0.8-1_all.deb ... 843s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 843s Selecting previously unselected package liblapack3:s390x. 843s Preparing to unpack .../043-liblapack3_3.12.0-4_s390x.deb ... 843s Unpacking liblapack3:s390x (3.12.0-4) ... 843s Selecting previously unselected package libthai-data. 843s Preparing to unpack .../044-libthai-data_0.1.29-2build1_all.deb ... 843s Unpacking libthai-data (0.1.29-2build1) ... 843s Selecting previously unselected package libthai0:s390x. 843s Preparing to unpack .../045-libthai0_0.1.29-2build1_s390x.deb ... 843s Unpacking libthai0:s390x (0.1.29-2build1) ... 843s Selecting previously unselected package libpango-1.0-0:s390x. 843s Preparing to unpack .../046-libpango-1.0-0_1.56.1-1_s390x.deb ... 843s Unpacking libpango-1.0-0:s390x (1.56.1-1) ... 843s Selecting previously unselected package libpangoft2-1.0-0:s390x. 843s Preparing to unpack .../047-libpangoft2-1.0-0_1.56.1-1_s390x.deb ... 843s Unpacking libpangoft2-1.0-0:s390x (1.56.1-1) ... 843s Selecting previously unselected package libpangocairo-1.0-0:s390x. 843s Preparing to unpack .../048-libpangocairo-1.0-0_1.56.1-1_s390x.deb ... 843s Unpacking libpangocairo-1.0-0:s390x (1.56.1-1) ... 843s Selecting previously unselected package libpaper2:s390x. 843s Preparing to unpack .../049-libpaper2_2.2.5-0.3_s390x.deb ... 843s Unpacking libpaper2:s390x (2.2.5-0.3) ... 843s Selecting previously unselected package libpaper-utils. 843s Preparing to unpack .../050-libpaper-utils_2.2.5-0.3_s390x.deb ... 843s Unpacking libpaper-utils (2.2.5-0.3) ... 843s Selecting previously unselected package libsharpyuv0:s390x. 843s Preparing to unpack .../051-libsharpyuv0_1.5.0-0.1_s390x.deb ... 843s Unpacking libsharpyuv0:s390x (1.5.0-0.1) ... 843s Selecting previously unselected package libsm6:s390x. 843s Preparing to unpack .../052-libsm6_2%3a1.2.4-1_s390x.deb ... 843s Unpacking libsm6:s390x (2:1.2.4-1) ... 843s Selecting previously unselected package libtcl8.6:s390x. 843s Preparing to unpack .../053-libtcl8.6_8.6.16+dfsg-1_s390x.deb ... 843s Unpacking libtcl8.6:s390x (8.6.16+dfsg-1) ... 843s Selecting previously unselected package libjbig0:s390x. 843s Preparing to unpack .../054-libjbig0_2.1-6.1ubuntu2_s390x.deb ... 843s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ... 843s Selecting previously unselected package libwebp7:s390x. 843s Preparing to unpack .../055-libwebp7_1.5.0-0.1_s390x.deb ... 843s Unpacking libwebp7:s390x (1.5.0-0.1) ... 843s Selecting previously unselected package libtiff6:s390x. 843s Preparing to unpack .../056-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ... 843s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 843s Selecting previously unselected package libxft2:s390x. 843s Preparing to unpack .../057-libxft2_2.3.6-1build1_s390x.deb ... 843s Unpacking libxft2:s390x (2.3.6-1build1) ... 843s Selecting previously unselected package libxss1:s390x. 843s Preparing to unpack .../058-libxss1_1%3a1.2.3-1build3_s390x.deb ... 843s Unpacking libxss1:s390x (1:1.2.3-1build3) ... 843s Selecting previously unselected package libtk8.6:s390x. 843s Preparing to unpack .../059-libtk8.6_8.6.16-1_s390x.deb ... 843s Unpacking libtk8.6:s390x (8.6.16-1) ... 843s Selecting previously unselected package libxt6t64:s390x. 843s Preparing to unpack .../060-libxt6t64_1%3a1.2.1-1.2build1_s390x.deb ... 843s Unpacking libxt6t64:s390x (1:1.2.1-1.2build1) ... 843s Selecting previously unselected package zip. 843s Preparing to unpack .../061-zip_3.0-14ubuntu2_s390x.deb ... 843s Unpacking zip (3.0-14ubuntu2) ... 843s Selecting previously unselected package unzip. 843s Preparing to unpack .../062-unzip_6.0-28ubuntu6_s390x.deb ... 843s Unpacking unzip (6.0-28ubuntu6) ... 843s Selecting previously unselected package xdg-utils. 843s Preparing to unpack .../063-xdg-utils_1.2.1-0ubuntu1_all.deb ... 843s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 843s Selecting previously unselected package r-base-core. 843s Preparing to unpack .../064-r-base-core_4.4.2-1build1_s390x.deb ... 843s Unpacking r-base-core (4.4.2-1build1) ... 843s Selecting previously unselected package r-cran-littler. 843s Preparing to unpack .../065-r-cran-littler_0.3.20-2_s390x.deb ... 843s Unpacking r-cran-littler (0.3.20-2) ... 843s Selecting previously unselected package littler. 843s Preparing to unpack .../066-littler_0.3.20-2_all.deb ... 843s Unpacking littler (0.3.20-2) ... 843s Selecting previously unselected package node-bootstrap-sass. 843s Preparing to unpack .../067-node-bootstrap-sass_3.4.3-2_all.deb ... 843s Unpacking node-bootstrap-sass (3.4.3-2) ... 843s Selecting previously unselected package node-html5shiv. 843s Preparing to unpack .../068-node-html5shiv_3.7.3+dfsg-5_all.deb ... 843s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 843s Selecting previously unselected package node-normalize.css. 843s Preparing to unpack .../069-node-normalize.css_8.0.1-5_all.deb ... 843s Unpacking node-normalize.css (8.0.1-5) ... 843s Selecting previously unselected package r-cran-mass. 843s Preparing to unpack .../070-r-cran-mass_7.3-64-1_s390x.deb ... 843s Unpacking r-cran-mass (7.3-64-1) ... 843s Selecting previously unselected package r-cran-pixmap. 843s Preparing to unpack .../071-r-cran-pixmap_0.4-13-1_all.deb ... 843s Unpacking r-cran-pixmap (0.4-13-1) ... 843s Selecting previously unselected package r-cran-lattice. 843s Preparing to unpack .../072-r-cran-lattice_0.22-6-1_s390x.deb ... 843s Unpacking r-cran-lattice (0.22-6-1) ... 843s Selecting previously unselected package r-cran-sp. 843s Preparing to unpack .../073-r-cran-sp_1%3a2.1-4+dfsg-1_s390x.deb ... 843s Unpacking r-cran-sp (1:2.1-4+dfsg-1) ... 843s Selecting previously unselected package r-cran-pkgkitten. 843s Preparing to unpack .../074-r-cran-pkgkitten_0.2.4-1_all.deb ... 843s Unpacking r-cran-pkgkitten (0.2.4-1) ... 843s Selecting previously unselected package r-cran-rcpp. 843s Preparing to unpack .../075-r-cran-rcpp_1.0.14-1_s390x.deb ... 843s Unpacking r-cran-rcpp (1.0.14-1) ... 843s Selecting previously unselected package r-cran-rcpparmadillo. 843s Preparing to unpack .../076-r-cran-rcpparmadillo_14.2.2-1-1_s390x.deb ... 843s Unpacking r-cran-rcpparmadillo (14.2.2-1-1) ... 843s Selecting previously unselected package r-cran-ade4. 843s Preparing to unpack .../077-r-cran-ade4_1.7-22-1_s390x.deb ... 843s Unpacking r-cran-ade4 (1.7-22-1) ... 843s Selecting previously unselected package r-cran-cli. 843s Preparing to unpack .../078-r-cran-cli_3.6.3-1_s390x.deb ... 843s Unpacking r-cran-cli (3.6.3-1) ... 843s Selecting previously unselected package r-cran-glue. 843s Preparing to unpack .../079-r-cran-glue_1.8.0-1_s390x.deb ... 843s Unpacking r-cran-glue (1.8.0-1) ... 843s Selecting previously unselected package r-cran-rlang. 843s Preparing to unpack .../080-r-cran-rlang_1.1.5-1_s390x.deb ... 843s Unpacking r-cran-rlang (1.1.5-1) ... 843s Selecting previously unselected package r-cran-lifecycle. 843s Preparing to unpack .../081-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 843s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 843s Selecting previously unselected package r-cran-magrittr. 843s Preparing to unpack .../082-r-cran-magrittr_2.0.3-1_s390x.deb ... 843s Unpacking r-cran-magrittr (2.0.3-1) ... 843s Selecting previously unselected package r-cran-matrix. 843s Preparing to unpack .../083-r-cran-matrix_1.7-2-1_s390x.deb ... 843s Unpacking r-cran-matrix (1.7-2-1) ... 843s Selecting previously unselected package r-cran-pkgconfig. 843s Preparing to unpack .../084-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 843s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 843s Selecting previously unselected package r-cran-vctrs. 843s Preparing to unpack .../085-r-cran-vctrs_0.6.5-1_s390x.deb ... 843s Unpacking r-cran-vctrs (0.6.5-1) ... 843s Selecting previously unselected package r-cran-cpp11. 843s Preparing to unpack .../086-r-cran-cpp11_0.5.1-1_all.deb ... 843s Unpacking r-cran-cpp11 (0.5.1-1) ... 843s Selecting previously unselected package r-cran-igraph. 843s Preparing to unpack .../087-r-cran-igraph_2.1.4-1_s390x.deb ... 843s Unpacking r-cran-igraph (2.1.4-1) ... 844s Selecting previously unselected package r-cran-nlme. 844s Preparing to unpack .../088-r-cran-nlme_3.1.167-1_s390x.deb ... 844s Unpacking r-cran-nlme (3.1.167-1) ... 844s Selecting previously unselected package r-cran-digest. 844s Preparing to unpack .../089-r-cran-digest_0.6.37-1_s390x.deb ... 844s Unpacking r-cran-digest (0.6.37-1) ... 844s Selecting previously unselected package r-cran-ape. 844s Preparing to unpack .../090-r-cran-ape_5.8-1-1_s390x.deb ... 844s Unpacking r-cran-ape (5.8-1-1) ... 844s Selecting previously unselected package r-cran-later. 844s Preparing to unpack .../091-r-cran-later_1.4.1+dfsg-1_s390x.deb ... 844s Unpacking r-cran-later (1.4.1+dfsg-1) ... 844s Selecting previously unselected package r-cran-fastmap. 844s Preparing to unpack .../092-r-cran-fastmap_1.2.0-1_s390x.deb ... 844s Unpacking r-cran-fastmap (1.2.0-1) ... 844s Selecting previously unselected package r-cran-r6. 844s Preparing to unpack .../093-r-cran-r6_2.5.1-1_all.deb ... 844s Unpacking r-cran-r6 (2.5.1-1) ... 844s Selecting previously unselected package r-cran-promises. 844s Preparing to unpack .../094-r-cran-promises_1.3.2+dfsg-1_s390x.deb ... 844s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 844s Selecting previously unselected package r-cran-httpuv. 844s Preparing to unpack .../095-r-cran-httpuv_1.6.15+dfsg-1_s390x.deb ... 844s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 844s Selecting previously unselected package r-cran-mime. 844s Preparing to unpack .../096-r-cran-mime_0.12-2_s390x.deb ... 844s Unpacking r-cran-mime (0.12-2) ... 844s Selecting previously unselected package r-cran-jsonlite. 844s Preparing to unpack .../097-r-cran-jsonlite_1.8.9+dfsg-1_s390x.deb ... 844s Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ... 844s Selecting previously unselected package r-cran-xtable. 844s Preparing to unpack .../098-r-cran-xtable_1%3a1.8-4-2_all.deb ... 844s Unpacking r-cran-xtable (1:1.8-4-2) ... 844s Selecting previously unselected package r-cran-base64enc. 844s Preparing to unpack .../099-r-cran-base64enc_0.1-3-3_s390x.deb ... 844s Unpacking r-cran-base64enc (0.1-3-3) ... 844s Selecting previously unselected package r-cran-htmltools. 844s Preparing to unpack .../100-r-cran-htmltools_0.5.8.1-1_s390x.deb ... 844s Unpacking r-cran-htmltools (0.5.8.1-1) ... 844s Selecting previously unselected package r-cran-fontawesome. 844s Preparing to unpack .../101-r-cran-fontawesome_0.5.3-1_all.deb ... 844s Unpacking r-cran-fontawesome (0.5.3-1) ... 844s Selecting previously unselected package r-cran-sourcetools. 844s Preparing to unpack .../102-r-cran-sourcetools_0.1.7-1-1_s390x.deb ... 844s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 844s Selecting previously unselected package r-cran-crayon. 844s Preparing to unpack .../103-r-cran-crayon_1.5.3-1_all.deb ... 844s Unpacking r-cran-crayon (1.5.3-1) ... 844s Selecting previously unselected package r-cran-withr. 844s Preparing to unpack .../104-r-cran-withr_3.0.2+dfsg-1_all.deb ... 844s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 844s Selecting previously unselected package r-cran-commonmark. 844s Preparing to unpack .../105-r-cran-commonmark_1.9.2-2_s390x.deb ... 844s Unpacking r-cran-commonmark (1.9.2-2) ... 844s Selecting previously unselected package r-cran-cachem. 844s Preparing to unpack .../106-r-cran-cachem_1.1.0-1_s390x.deb ... 844s Unpacking r-cran-cachem (1.1.0-1) ... 844s Selecting previously unselected package r-cran-jquerylib. 844s Preparing to unpack .../107-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 844s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 844s Selecting previously unselected package r-cran-memoise. 844s Preparing to unpack .../108-r-cran-memoise_2.0.1-1_all.deb ... 844s Unpacking r-cran-memoise (2.0.1-1) ... 844s Selecting previously unselected package r-cran-fs. 844s Preparing to unpack .../109-r-cran-fs_1.6.5+dfsg-1_s390x.deb ... 844s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 844s Selecting previously unselected package r-cran-rappdirs. 844s Preparing to unpack .../110-r-cran-rappdirs_0.3.3-1_s390x.deb ... 844s Unpacking r-cran-rappdirs (0.3.3-1) ... 844s Selecting previously unselected package r-cran-sass. 844s Preparing to unpack .../111-r-cran-sass_0.4.9+dfsg-1_s390x.deb ... 844s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 844s Selecting previously unselected package r-cran-bslib. 844s Preparing to unpack .../112-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 844s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 844s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 844s Preparing to unpack .../113-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 844s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 844s Selecting previously unselected package r-cran-shiny. 844s Preparing to unpack .../114-r-cran-shiny_1.9.1+dfsg-1_all.deb ... 844s Unpacking r-cran-shiny (1.9.1+dfsg-1) ... 844s Selecting previously unselected package r-cran-gtable. 844s Preparing to unpack .../115-r-cran-gtable_0.3.6+dfsg-1_all.deb ... 844s Unpacking r-cran-gtable (0.3.6+dfsg-1) ... 844s Selecting previously unselected package r-cran-isoband. 844s Preparing to unpack .../116-r-cran-isoband_0.2.7-1_s390x.deb ... 844s Unpacking r-cran-isoband (0.2.7-1) ... 844s Selecting previously unselected package r-cran-mgcv. 844s Preparing to unpack .../117-r-cran-mgcv_1.9-1-1_s390x.deb ... 844s Unpacking r-cran-mgcv (1.9-1-1) ... 844s Selecting previously unselected package r-cran-farver. 844s Preparing to unpack .../118-r-cran-farver_2.1.2-1_s390x.deb ... 844s Unpacking r-cran-farver (2.1.2-1) ... 844s Selecting previously unselected package r-cran-labeling. 844s Preparing to unpack .../119-r-cran-labeling_0.4.3-1_all.deb ... 844s Unpacking r-cran-labeling (0.4.3-1) ... 844s Selecting previously unselected package r-cran-colorspace. 844s Preparing to unpack .../120-r-cran-colorspace_2.1-1+dfsg-1_s390x.deb ... 844s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ... 844s Selecting previously unselected package r-cran-munsell. 844s Preparing to unpack .../121-r-cran-munsell_0.5.1-1_all.deb ... 844s Unpacking r-cran-munsell (0.5.1-1) ... 844s Selecting previously unselected package r-cran-rcolorbrewer. 844s Preparing to unpack .../122-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ... 844s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ... 844s Selecting previously unselected package r-cran-viridislite. 844s Preparing to unpack .../123-r-cran-viridislite_0.4.2-2_all.deb ... 844s Unpacking r-cran-viridislite (0.4.2-2) ... 844s Selecting previously unselected package r-cran-scales. 844s Preparing to unpack .../124-r-cran-scales_1.3.0-1_all.deb ... 844s Unpacking r-cran-scales (1.3.0-1) ... 844s Selecting previously unselected package r-cran-fansi. 844s Preparing to unpack .../125-r-cran-fansi_1.0.5-1_s390x.deb ... 844s Unpacking r-cran-fansi (1.0.5-1) ... 844s Selecting previously unselected package r-cran-utf8. 844s Preparing to unpack .../126-r-cran-utf8_1.2.4-1_s390x.deb ... 844s Unpacking r-cran-utf8 (1.2.4-1) ... 844s Selecting previously unselected package r-cran-pillar. 844s Preparing to unpack .../127-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 844s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 844s Selecting previously unselected package r-cran-tibble. 844s Preparing to unpack .../128-r-cran-tibble_3.2.1+dfsg-3_s390x.deb ... 844s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 844s Selecting previously unselected package r-cran-ggplot2. 844s Preparing to unpack .../129-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ... 844s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ... 844s Selecting previously unselected package r-cran-segmented. 844s Preparing to unpack .../130-r-cran-segmented_2.1-3-1_all.deb ... 844s Unpacking r-cran-segmented (2.1-3-1) ... 844s Selecting previously unselected package r-cran-seqinr. 844s Preparing to unpack .../131-r-cran-seqinr_4.2-36-1_s390x.deb ... 844s Unpacking r-cran-seqinr (4.2-36-1) ... 844s Selecting previously unselected package r-cran-boot. 844s Preparing to unpack .../132-r-cran-boot_1.3-31-1_all.deb ... 844s Unpacking r-cran-boot (1.3-31-1) ... 844s Selecting previously unselected package r-cran-plyr. 844s Preparing to unpack .../133-r-cran-plyr_1.8.9-1_s390x.deb ... 844s Unpacking r-cran-plyr (1.8.9-1) ... 844s Selecting previously unselected package r-cran-stringi. 844s Preparing to unpack .../134-r-cran-stringi_1.8.4-1build1_s390x.deb ... 844s Unpacking r-cran-stringi (1.8.4-1build1) ... 844s Selecting previously unselected package r-cran-stringr. 844s Preparing to unpack .../135-r-cran-stringr_1.5.1-1_all.deb ... 844s Unpacking r-cran-stringr (1.5.1-1) ... 844s Selecting previously unselected package r-cran-reshape2. 844s Preparing to unpack .../136-r-cran-reshape2_1.4.4-2build1_s390x.deb ... 844s Unpacking r-cran-reshape2 (1.4.4-2build1) ... 844s Selecting previously unselected package r-cran-generics. 844s Preparing to unpack .../137-r-cran-generics_0.1.3-1_all.deb ... 844s Unpacking r-cran-generics (0.1.3-1) ... 844s Selecting previously unselected package r-cran-tidyselect. 844s Preparing to unpack .../138-r-cran-tidyselect_1.2.1+dfsg-1_s390x.deb ... 844s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 844s Selecting previously unselected package r-cran-dplyr. 844s Preparing to unpack .../139-r-cran-dplyr_1.1.4-4_s390x.deb ... 844s Unpacking r-cran-dplyr (1.1.4-4) ... 844s Selecting previously unselected package r-cran-permute. 844s Preparing to unpack .../140-r-cran-permute_0.9-7-1_all.deb ... 844s Unpacking r-cran-permute (0.9-7-1) ... 844s Selecting previously unselected package r-cran-cluster. 844s Preparing to unpack .../141-r-cran-cluster_2.1.8-1_s390x.deb ... 844s Unpacking r-cran-cluster (2.1.8-1) ... 844s Selecting previously unselected package r-cran-vegan. 844s Preparing to unpack .../142-r-cran-vegan_2.6-8+dfsg-1_s390x.deb ... 844s Unpacking r-cran-vegan (2.6-8+dfsg-1) ... 845s Selecting previously unselected package r-cran-adegenet. 845s Preparing to unpack .../143-r-cran-adegenet_2.1.10-1_s390x.deb ... 845s Unpacking r-cran-adegenet (2.1.10-1) ... 845s Selecting previously unselected package r-cran-brio. 845s Preparing to unpack .../144-r-cran-brio_1.1.5-1_s390x.deb ... 845s Unpacking r-cran-brio (1.1.5-1) ... 845s Selecting previously unselected package r-cran-ps. 845s Preparing to unpack .../145-r-cran-ps_1.8.1-1_s390x.deb ... 845s Unpacking r-cran-ps (1.8.1-1) ... 845s Selecting previously unselected package r-cran-processx. 845s Preparing to unpack .../146-r-cran-processx_3.8.5-1_s390x.deb ... 845s Unpacking r-cran-processx (3.8.5-1) ... 845s Selecting previously unselected package r-cran-callr. 845s Preparing to unpack .../147-r-cran-callr_3.7.6-1_all.deb ... 845s Unpacking r-cran-callr (3.7.6-1) ... 845s Selecting previously unselected package r-cran-desc. 845s Preparing to unpack .../148-r-cran-desc_1.4.3-1_all.deb ... 845s Unpacking r-cran-desc (1.4.3-1) ... 845s Selecting previously unselected package r-cran-diffobj. 845s Preparing to unpack .../149-r-cran-diffobj_0.3.5-1_s390x.deb ... 845s Unpacking r-cran-diffobj (0.3.5-1) ... 845s Selecting previously unselected package r-cran-evaluate. 845s Preparing to unpack .../150-r-cran-evaluate_1.0.3-1_all.deb ... 845s Unpacking r-cran-evaluate (1.0.3-1) ... 845s Selecting previously unselected package r-cran-pkgbuild. 845s Preparing to unpack .../151-r-cran-pkgbuild_1.4.6-1_all.deb ... 845s Unpacking r-cran-pkgbuild (1.4.6-1) ... 845s Selecting previously unselected package r-cran-rprojroot. 845s Preparing to unpack .../152-r-cran-rprojroot_2.0.4-2_all.deb ... 845s Unpacking r-cran-rprojroot (2.0.4-2) ... 845s Selecting previously unselected package r-cran-pkgload. 845s Preparing to unpack .../153-r-cran-pkgload_1.4.0-1_all.deb ... 845s Unpacking r-cran-pkgload (1.4.0-1) ... 845s Selecting previously unselected package r-cran-praise. 845s Preparing to unpack .../154-r-cran-praise_1.0.0-4build1_all.deb ... 845s Unpacking r-cran-praise (1.0.0-4build1) ... 845s Selecting previously unselected package r-cran-waldo. 845s Preparing to unpack .../155-r-cran-waldo_0.6.1-1_all.deb ... 845s Unpacking r-cran-waldo (0.6.1-1) ... 845s Selecting previously unselected package r-cran-testthat. 845s Preparing to unpack .../156-r-cran-testthat_3.2.3-1_s390x.deb ... 845s Unpacking r-cran-testthat (3.2.3-1) ... 845s Setting up libjs-json (0~20221030+~1.0.8-1) ... 845s Setting up javascript-common (11+nmu1) ... 845s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 845s Setting up libpixman-1-0:s390x (0.44.0-3) ... 845s Setting up libsharpyuv0:s390x (1.5.0-0.1) ... 845s Setting up libxrender1:s390x (1:0.9.10-1.1build1) ... 845s Setting up libdatrie1:s390x (0.2.13-3build1) ... 845s Setting up libjs-popper.js (1.16.1+ds-6) ... 845s Setting up libxcb-render0:s390x (1.17.0-2) ... 845s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 845s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 845s Setting up unzip (6.0-28ubuntu6) ... 845s Setting up x11-common (1:7.7+23ubuntu3) ... 845s Setting up node-html5shiv (3.7.3+dfsg-5) ... 845s Setting up libdeflate0:s390x (1.23-1) ... 845s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) 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libsuitesparseconfig7:s390x (1:7.8.3+dfsg-2) ... 845s Setting up libharfbuzz0b:s390x (10.2.0-1) ... 845s Setting up libthai-data (0.1.29-2build1) ... 845s Setting up node-bootstrap-sass (3.4.3-2) ... 845s Setting up libxss1:s390x (1:1.2.3-1build3) ... 845s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... 845s Setting up libpaper2:s390x (2.2.5-0.3) ... 845s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 845s Setting up node-normalize.css (8.0.1-5) ... 845s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 845s Setting up xdg-utils (1.2.1-0ubuntu1) ... 845s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 845s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 845s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 845s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 845s Setting up libice6:s390x (2:1.1.1-1) ... 845s Setting up liblapack3:s390x (3.12.0-4) ... 845s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 845s Setting up libamd3:s390x (1:7.8.3+dfsg-2) ... 845s Setting up libcolamd3:s390x (1:7.8.3+dfsg-2) ... 845s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 845s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 845s Setting up libpaper-utils (2.2.5-0.3) ... 845s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 845s Setting up libthai0:s390x (0.1.29-2build1) ... 845s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 845s Setting up libglpk40:s390x (5.0-1build2) ... 845s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 845s Setting up libfontconfig1:s390x (2.15.0-1.1ubuntu2) ... 845s Setting up libsm6:s390x (2:1.2.4-1) ... 845s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 847s Regenerating fonts cache... done. 847s Setting up libxft2:s390x (2.3.6-1build1) ... 847s Setting up libtk8.6:s390x (8.6.16-1) ... 847s Setting up libpango-1.0-0:s390x (1.56.1-1) ... 847s Setting up libcairo2:s390x (1.18.2-2) ... 847s Setting up libxt6t64:s390x (1:1.2.1-1.2build1) ... 847s Setting up libpangoft2-1.0-0:s390x (1.56.1-1) ... 847s Setting up libpangocairo-1.0-0:s390x (1.56.1-1) ... 847s Setting up r-base-core (4.4.2-1build1) ... 847s Creating config file /etc/R/Renviron with new version 847s Setting up r-cran-crayon (1.5.3-1) ... 847s Setting up r-cran-labeling (0.4.3-1) ... 847s Setting up r-cran-sourcetools (0.1.7-1-1) ... 847s Setting up r-cran-lattice (0.22-6-1) ... 847s Setting up r-cran-ps (1.8.1-1) ... 847s Setting up r-cran-nlme (3.1.167-1) ... 847s Setting up r-cran-farver (2.1.2-1) ... 847s Setting up r-cran-viridislite (0.4.2-2) ... 848s Setting up r-cran-pixmap (0.4-13-1) ... 848s Setting up r-cran-cluster (2.1.8-1) ... 848s Setting up r-cran-commonmark (1.9.2-2) ... 848s Setting up r-cran-r6 (2.5.1-1) ... 848s Setting up r-cran-pkgkitten (0.2.4-1) ... 848s Setting up r-cran-magrittr (2.0.3-1) ... 848s Setting up r-cran-rappdirs (0.3.3-1) ... 848s Setting up r-cran-littler (0.3.20-2) ... 848s Setting up r-cran-permute (0.9-7-1) ... 848s Setting up r-cran-fs (1.6.5+dfsg-1) ... 848s Setting up r-cran-rcpp (1.0.14-1) ... 848s Setting up r-cran-brio (1.1.5-1) ... 848s Setting up r-cran-boot (1.3-31-1) ... 848s Setting up r-cran-diffobj (0.3.5-1) ... 848s Setting up r-cran-rlang (1.1.5-1) ... 848s Setting up littler (0.3.20-2) ... 848s Setting up r-cran-withr (3.0.2+dfsg-1) ... 848s Setting up r-cran-processx (3.8.5-1) ... 848s Setting up r-cran-mime (0.12-2) ... 848s Setting up r-cran-praise (1.0.0-4build1) ... 848s Setting up r-cran-generics (0.1.3-1) ... 848s Setting up r-cran-base64enc (0.1-3-3) ... 848s Setting up r-cran-digest (0.6.37-1) ... 848s Setting up r-cran-ape (5.8-1-1) ... 848s Setting up r-cran-evaluate (1.0.3-1) ... 848s Setting up r-cran-fansi (1.0.5-1) ... 848s Setting up r-cran-mass (7.3-64-1) ... 848s Setting up r-cran-glue (1.8.0-1) ... 848s Setting up r-cran-xtable (1:1.8-4-2) ... 848s Setting up r-cran-cli (3.6.3-1) ... 848s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 848s Setting up r-cran-rprojroot (2.0.4-2) ... 848s Setting up r-cran-fastmap (1.2.0-1) ... 848s Setting up r-cran-jsonlite (1.8.9+dfsg-1) ... 848s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 848s Setting up r-cran-sp (1:2.1-4+dfsg-1) ... 848s Setting up r-cran-utf8 (1.2.4-1) ... 848s Setting up r-cran-colorspace (2.1-1+dfsg-1) ... 848s Setting up r-cran-stringi (1.8.4-1build1) ... 848s Setting up r-cran-cpp11 (0.5.1-1) ... 848s Setting up r-cran-segmented (2.1-3-1) ... 848s Setting up r-cran-plyr (1.8.9-1) ... 848s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ... 848s Setting up r-cran-isoband (0.2.7-1) ... 848s Setting up r-cran-waldo (0.6.1-1) ... 848s Setting up r-cran-gtable (0.3.6+dfsg-1) ... 848s Setting up r-cran-later (1.4.1+dfsg-1) ... 848s Setting up r-cran-matrix (1.7-2-1) ... 848s Setting up r-cran-htmltools (0.5.8.1-1) ... 848s Setting up r-cran-mgcv (1.9-1-1) ... 848s Setting up r-cran-cachem (1.1.0-1) ... 848s Setting up r-cran-sass (0.4.9+dfsg-1) ... 848s Setting up r-cran-rcpparmadillo (14.2.2-1-1) ... 848s Setting up r-cran-vctrs (0.6.5-1) ... 848s Setting up r-cran-pillar (1.10.1+dfsg-1) ... 848s Setting up r-cran-stringr (1.5.1-1) ... 848s Setting up r-cran-callr (3.7.6-1) ... 848s Setting up r-cran-desc (1.4.3-1) ... 848s Setting up r-cran-munsell (0.5.1-1) ... 848s Setting up r-cran-tibble (3.2.1+dfsg-3) ... 848s Setting up r-cran-fontawesome (0.5.3-1) ... 848s Setting up r-cran-igraph (2.1.4-1) ... 848s Setting up r-cran-ade4 (1.7-22-1) ... 848s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 848s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... 848s Setting up r-cran-reshape2 (1.4.4-2build1) ... 848s Setting up r-cran-scales (1.3.0-1) ... 848s Setting up r-cran-memoise (2.0.1-1) ... 848s Setting up r-cran-promises (1.3.2+dfsg-1) ... 848s Setting up r-cran-vegan (2.6-8+dfsg-1) ... 848s Setting up r-cran-pkgbuild (1.4.6-1) ... 848s Setting up r-cran-dplyr (1.1.4-4) ... 848s Setting up r-cran-pkgload (1.4.0-1) ... 848s Setting up r-cran-seqinr (4.2-36-1) ... 848s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... 848s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 848s Setting up r-cran-testthat (3.2.3-1) ... 848s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 848s Setting up r-cran-shiny (1.9.1+dfsg-1) ... 848s Setting up r-cran-adegenet (2.1.10-1) ... 848s Processing triggers for libc-bin (2.40-4ubuntu1) ... 848s Processing triggers for man-db (2.13.0-1) ... 848s Processing triggers for install-info (7.1.1-1) ... 848s autopkgtest: DBG: testbed command exited with code 0 848s autopkgtest: DBG: testbed command ['dpkg-query', '--show', '-f', '${Status}', 'r-cran-adegenet'], kind short, sout pipe, serr pipe, env [] 849s autopkgtest: DBG: testbed command exited with code 0 849s autopkgtest: DBG: testbed command ['sh', '-ec', "dpkg-query --show -f '${Package}\\t${Version}\\n' > /tmp/autopkgtest.3p55QY/run-unit-test-packages.all"], kind short, sout raw, serr pipe, env [] 849s autopkgtest: DBG: testbed command exited with code 0 849s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.3p55QY/run-unit-test-packages.all /tmp/autopkgtest-work.juq5n6la/out/run-unit-test-packages.all 849s autopkgtest: DBG: got reply from testbed: ok 849s autopkgtest: DBG: testbed command ['test', '-e', '/tmp/autopkgtest.3p55QY/build.RAV/src'], kind short, sout raw, serr raw, env [] 850s autopkgtest: DBG: testbed command exited with code 0 850s autopkgtest: DBG: copydown: tb path /tmp/autopkgtest.3p55QY/build.RAV/src already exists 850s autopkgtest [22:04:18]: test run-unit-test: [----------------------- 850s autopkgtest: DBG: testbed command ['su', '-s', '/bin/bash', 'ubuntu', '-c', 'set -e; exec /tmp/autopkgtest.3p55QY/wrapper.sh --debug --artifacts=/tmp/autopkgtest.3p55QY/run-unit-test-artifacts --chdir=/tmp/autopkgtest.3p55QY/build.RAV/src --env=AUTOPKGTEST_TESTBED_ARCH=s390x --env=AUTOPKGTEST_TEST_ARCH=s390x --env=DEB_BUILD_OPTIONS=parallel=2 --env=DEBIAN_FRONTEND=noninteractive --env=LANG=C.UTF-8 --unset-env=LANGUAGE --unset-env=LC_ADDRESS --unset-env=LC_ALL --unset-env=LC_COLLATE --unset-env=LC_CTYPE --unset-env=LC_IDENTIFICATION --unset-env=LC_MEASUREMENT --unset-env=LC_MESSAGES --unset-env=LC_MONETARY --unset-env=LC_NAME --unset-env=LC_NUMERIC --unset-env=LC_PAPER --unset-env=LC_TELEPHONE --unset-env=LC_TIME --script-pid-file=/tmp/autopkgtest_script_pid --source-profile --stderr=/tmp/autopkgtest.3p55QY/run-unit-test-stderr --stdout=/tmp/autopkgtest.3p55QY/run-unit-test-stdout --tmp=/tmp/autopkgtest.3p55QY/autopkgtest_tmp --env=ADT_TEST_TRIGGERS=r-cran-testthat/3.2.3-1 --make-executable=/tmp/autopkgtest.3p55QY/build.RAV/src/debian/tests/run-unit-test -- /tmp/autopkgtest.3p55QY/build.RAV/src/debian/tests/run-unit-test'], kind test, sout raw, serr raw, env [] 850s /tmp/autopkgtest.3p55QY/wrapper.sh: creating AUTOPKGTEST_ARTIFACTS: /tmp/autopkgtest.3p55QY/run-unit-test-artifacts 850s /tmp/autopkgtest.3p55QY/wrapper.sh: changing to directory: /tmp/autopkgtest.3p55QY/build.RAV/src 850s /tmp/autopkgtest.3p55QY/wrapper.sh: setting environment: AUTOPKGTEST_TESTBED_ARCH=s390x 850s /tmp/autopkgtest.3p55QY/wrapper.sh: setting environment: AUTOPKGTEST_TEST_ARCH=s390x 850s /tmp/autopkgtest.3p55QY/wrapper.sh: setting environment: DEB_BUILD_OPTIONS=parallel=2 850s /tmp/autopkgtest.3p55QY/wrapper.sh: setting environment: DEBIAN_FRONTEND=noninteractive 850s /tmp/autopkgtest.3p55QY/wrapper.sh: setting environment: LANG=C.UTF-8 850s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LANGUAGE 850s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_ADDRESS 850s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_ALL 850s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_COLLATE 850s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_CTYPE 850s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_IDENTIFICATION 850s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_MEASUREMENT 850s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_MESSAGES 850s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_MONETARY 850s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_NAME 850s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_NUMERIC 850s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_PAPER 850s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_TELEPHONE 850s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_TIME 850s /tmp/autopkgtest.3p55QY/wrapper.sh: will create pid file: /tmp/autopkgtest_script_pid 850s /tmp/autopkgtest.3p55QY/wrapper.sh: pretending to be a login shell 850s /tmp/autopkgtest.3p55QY/wrapper.sh: will write standard error to /tmp/autopkgtest.3p55QY/run-unit-test-stderr 850s /tmp/autopkgtest.3p55QY/wrapper.sh: will write stdout to /tmp/autopkgtest.3p55QY/run-unit-test-stdout 850s /tmp/autopkgtest.3p55QY/wrapper.sh: creating AUTOPKGTEST_TMP: /tmp/autopkgtest.3p55QY/autopkgtest_tmp 850s /tmp/autopkgtest.3p55QY/wrapper.sh: setting environment: ADT_TEST_TRIGGERS=r-cran-testthat/3.2.3-1 850s /tmp/autopkgtest.3p55QY/wrapper.sh: marking as executable: /tmp/autopkgtest.3p55QY/build.RAV/src/debian/tests/run-unit-test 850s /tmp/autopkgtest.3p55QY/wrapper.sh: command to run: /tmp/autopkgtest.3p55QY/build.RAV/src/debian/tests/run-unit-test 850s /tmp/autopkgtest.3p55QY/wrapper.sh: copying /tmp/tmp.yt1erXnxIH/out to stdout and file: /tmp/autopkgtest.3p55QY/run-unit-test-stdout 850s /tmp/autopkgtest.3p55QY/wrapper.sh: copying /tmp/tmp.yt1erXnxIH/err to standard error and file: /tmp/autopkgtest.3p55QY/run-unit-test-stdout 850s /tmp/autopkgtest.3p55QY/wrapper.sh: writing script pid 3352 to /tmp/autopkgtest_script_pid 850s 850s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 850s Copyright (C) 2024 The R Foundation for Statistical Computing 850s Platform: s390x-ibm-linux-gnu 850s 850s R is free software and comes with ABSOLUTELY NO WARRANTY. 850s You are welcome to redistribute it under certain conditions. 850s Type 'license()' or 'licence()' for distribution details. 850s 850s R is a collaborative project with many contributors. 850s Type 'contributors()' for more information and 850s 'citation()' on how to cite R or R packages in publications. 850s 850s Type 'demo()' for some demos, 'help()' for on-line help, or 850s 'help.start()' for an HTML browser interface to help. 850s Type 'q()' to quit R. 850s 850s > library(testthat) 850s > suppressPackageStartupMessages(library(adegenet)) 851s > test_check("adegenet") 851s 851s Converting data from a genind to a genpop object... 851s 851s ...done. 851s 852s [ FAIL 0 | WARN 0 | SKIP 39 | PASS 13 ] 852s 852s == Skipped tests (39) ========================================================== 853s * On CRAN (39): 'test-findclust.R:4:3', 'test-prop.R:13:3', 853s 'test-seppop.R:6:3', 'test-seppop.R:14:3', 'test-seppop.R:23:3', 853s 'test-seppop.R:33:3', 'test-seppop.R:56:3', 'test-seppop.R:65:3', 853s 'test-seppop.R:75:3', 'test_compoplot.R:6:3', 'test_compoplot.R:11:3', 853s 'test_compoplot.R:16:3', 'test_compoplot.R:21:3', 'test_compoplot.R:26:3', 853s 'test_constructors.R:4:3', 'test_constructors.R:11:3', 'test_genlight.R:5:3', 853s 'test_genlight.R:18:3', 'test_genlight.R:35:3', 'test_genlight.R:42:3', 853s 'test_genlight.R:68:3', 'test_genlight.R:79:3', 'test_genlight.R:90:3', 853s 'test_genlight.R:96:3', 'test_genlight.R:104:3', 'test_hierarchy.R:4:3', 853s 'test_hierarchy.R:27:3', 'test_hierarchy.R:38:3', 'test_repool.R:7:3', 853s 'test_snapclust.R:5:5', 'test_snapclust.R:31:5', 'test_snapclust.R:65:3', 853s 'test_snapclust.R:78:3', 'test_snapclust.R:88:3', 'test_subset.R:6:3', 853s 'test_subset.R:14:3', 'test_summary.R:4:3', 'test_xval.R:15:3', 853s 'test_xval.R:26:3' 853s 853s [ FAIL 0 | WARN 0 | SKIP 39 | PASS 13 ] 853s > 853s /tmp/autopkgtest.3p55QY/wrapper.sh: checking for leaked background processes... 853s /tmp/autopkgtest.3p55QY/wrapper.sh: waiting for tee/cat subprocesses... 853s /tmp/autopkgtest.3p55QY/wrapper.sh: cleaning up... 853s /tmp/autopkgtest.3p55QY/wrapper.sh: Exit status: 0 853s autopkgtest: DBG: testbed command exited with code 0 853s autopkgtest [22:04:21]: test run-unit-test: -----------------------] 853s autopkgtest: DBG: testbed executing test finished with exit status 0 853s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.3p55QY/run-unit-test-stdout /tmp/autopkgtest-work.juq5n6la/out/run-unit-test-stdout 854s autopkgtest: DBG: got reply from testbed: ok 854s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.3p55QY/run-unit-test-stderr /tmp/autopkgtest-work.juq5n6la/out/run-unit-test-stderr 854s autopkgtest: DBG: got reply from testbed: ok 854s autopkgtest [22:04:22]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - - 854s run-unit-test PASS 854s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.3p55QY/run-unit-test-artifacts/ /tmp/autopkgtest-work.juq5n6la/out/artifacts/ 854s autopkgtest: DBG: got reply from testbed: ok 854s autopkgtest: DBG: testbed command ['rm', '-rf', '/tmp/autopkgtest.3p55QY/run-unit-test-artifacts', '/tmp/autopkgtest.3p55QY/autopkgtest_tmp'], kind short, sout raw, serr pipe, env [] 854s autopkgtest: DBG: testbed command exited with code 0 854s autopkgtest [22:04:22]: test pkg-r-autopkgtest: preparing testbed 854s autopkgtest: DBG: testbed reset: modified=False, deps_installed=['r-cran-adegenet', 'r-cran-testthat'], deps_new=['r-cran-adegenet', 'r-cran-maps', 'r-cran-spdep', 'r-cran-interp', 'r-cran-testthat', 'pkg-r-autopkgtest'] 854s autopkgtest: DBG: Binaries: no registered binaries, not publishing anything 854s autopkgtest: DBG: install_deps: deps_new=['r-cran-adegenet', 'r-cran-maps', 'r-cran-spdep', 'r-cran-interp', 'r-cran-testthat', 'pkg-r-autopkgtest'] 854s autopkgtest: DBG: install-deps: satisfying r-cran-adegenet, r-cran-maps, r-cran-spdep, r-cran-interp, r-cran-testthat, pkg-r-autopkgtest 854s autopkgtest: DBG: can use apt-get on testbed: True 854s autopkgtest: DBG: testbed command ['/bin/sh', '-ec', '"$@" 3>&2 2>&1', 'run_apt_command', '/usr/bin/eatmydata', 'apt-get', '--quiet', '--assume-yes', '-o=APT::Status-Fd=3', '-o=APT::Install-Recommends=false', '-o=Dpkg::Options::=--force-confnew', '-o=Debug::pkgProblemResolver=true', 'satisfy', 'r-cran-adegenet, r-cran-maps, r-cran-spdep, r-cran-interp, r-cran-testthat, pkg-r-autopkgtest'], kind install, sout raw, serr pipe, env ['DEBIAN_FRONTEND=noninteractive', 'APT_LISTBUGS_FRONTEND=none', 'APT_LISTCHANGES_FRONTEND=none'] 855s Reading package lists... 855s Building dependency tree... 855s Reading state information... 855s Starting pkgProblemResolver with broken count: 0 855s Starting 2 pkgProblemResolver with broken count: 0 855s Done 855s The following NEW packages will be installed: 855s build-essential cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu 855s dctrl-tools g++ g++-14 g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14 855s gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu gdal-data gdal-plugins gfortran 855s gfortran-14 gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu 855s icu-devtools libaec0 libaom3 libarmadillo14 libarpack2t64 libasan8 libavif16 855s libblas-dev libblosc1 libbz2-dev libcc1-0 libcfitsio10t64 libdav1d7 855s libde265-0 libdeflate-dev libfreexl1 libfyba0t64 libgcc-14-dev libgdal36 855s libgeos-c1t64 libgeos3.13.0 libgeotiff5 libgfortran-14-dev libgif7 855s libgpgmepp6t64 libhdf4-0-alt libhdf5-310 libhdf5-hl-310 855s libheif-plugin-aomdec libheif-plugin-libde265 libheif1 libicu-dev libisl23 855s libitm1 libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev libkmlbase1t64 855s libkmldom1t64 libkmlengine1t64 liblapack-dev liblcms2-2 liblzma-dev 855s libminizip1t64 libmpc3 libmysqlclient24 libncurses-dev libnetcdf19t64 855s libodbc2 libodbcinst2 libogdi4.1 libopenjp2-7 libpcre2-16-0 libpcre2-32-0 855s libpcre2-dev libpcre2-posix3 libpkgconf3 libpng-dev libpoppler145 libpq5 855s libproj25 libqhull-r8.0 librav1e0.7 libreadline-dev librttopo1 libsnappy1v5 855s libspatialite8t64 libstdc++-14-dev libsvtav1enc2 libsz2 libtirpc-dev 855s libubsan1 libudunits2-0 libudunits2-data liburiparser1 libxerces-c3.2t64 855s libyuv0 mysql-common pkg-r-autopkgtest pkgconf pkgconf-bin proj-data 855s r-base-dev r-cran-class r-cran-classint r-cran-dbi r-cran-deldir 855s r-cran-e1071 r-cran-interp r-cran-kernsmooth r-cran-maps r-cran-proxy 855s r-cran-rcppeigen r-cran-s2 r-cran-sf r-cran-spdata r-cran-spdep r-cran-units 855s r-cran-wk unixodbc-common zlib1g-dev 855s 0 upgraded, 121 newly installed, 0 to remove and 0 not upgraded. 855s Need to get 140 MB of archives. 855s After this operation, 443 MB of additional disk space will be used. 855s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libisl23 s390x 0.27-1 [704 kB] 858s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB] 859s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-13ubuntu1 [9570 kB] 943s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14 s390x 14.2.0-13ubuntu1 [1026 B] 943s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [5452 B] 943s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x cpp s390x 4:14.1.0-2ubuntu1 [22.4 kB] 943s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libcc1-0 s390x 14.2.0-13ubuntu1 [50.7 kB] 943s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libitm1 s390x 14.2.0-13ubuntu1 [30.9 kB] 944s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libasan8 s390x 14.2.0-13ubuntu1 [2964 kB] 983s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libubsan1 s390x 14.2.0-13ubuntu1 [1184 kB] 999s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-14-dev s390x 14.2.0-13ubuntu1 [1037 kB] 1013s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-13ubuntu1 [18.7 MB] 1191s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14 s390x 14.2.0-13ubuntu1 [523 kB] 1195s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [1204 B] 1195s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x gcc s390x 4:14.1.0-2ubuntu1 [4996 B] 1195s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++-14-dev s390x 14.2.0-13ubuntu1 [2612 kB] 1234s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-13ubuntu1 [11.0 MB] 1343s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14 s390x 14.2.0-13ubuntu1 [21.1 kB] 1343s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x g++-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [956 B] 1343s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x g++ s390x 4:14.1.0-2ubuntu1 [1076 B] 1343s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x build-essential s390x 12.10ubuntu1 [4930 B] 1343s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x dctrl-tools s390x 2.24-3build3 [106 kB] 1344s Get:23 http://ftpmaster.internal/ubuntu plucky/universe s390x gdal-data all 3.10.1+dfsg-1build2 [269 kB] 1347s Get:24 http://ftpmaster.internal/ubuntu plucky/universe s390x gdal-plugins s390x 3.10.1+dfsg-1build2 [25.6 kB] 1347s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran-14-dev s390x 14.2.0-13ubuntu1 [654 kB] 1352s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14-s390x-linux-gnu s390x 14.2.0-13ubuntu1 [10.3 MB] 1440s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14 s390x 14.2.0-13ubuntu1 [13.2 kB] 1440s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [1016 B] 1440s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran s390x 4:14.1.0-2ubuntu1 [1160 B] 1440s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x icu-devtools s390x 76.1-1ubuntu2 [225 kB] 1441s Get:31 http://ftpmaster.internal/ubuntu plucky/universe s390x libaec0 s390x 1.1.3-1 [25.7 kB] 1442s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x libaom3 s390x 3.11.0-1 [1493 kB] 1461s Get:33 http://ftpmaster.internal/ubuntu plucky/universe s390x libarpack2t64 s390x 3.9.1-4 [110 kB] 1462s Get:34 http://ftpmaster.internal/ubuntu plucky/universe s390x libarmadillo14 s390x 1:14.2.1+dfsg-1 [110 kB] 1463s Get:35 http://ftpmaster.internal/ubuntu plucky/universe s390x libdav1d7 s390x 1.5.1-1 [312 kB] 1466s Get:36 http://ftpmaster.internal/ubuntu plucky/universe s390x librav1e0.7 s390x 0.7.1-9 [845 kB] 1473s Get:37 http://ftpmaster.internal/ubuntu plucky/universe s390x libsvtav1enc2 s390x 2.3.0+dfsg-1 [2294 kB] 1501s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x libyuv0 s390x 0.0.1899.20250103-1 [127 kB] 1502s Get:39 http://ftpmaster.internal/ubuntu plucky/universe s390x libavif16 s390x 1.1.1-1ubuntu1 [103 kB] 1503s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libblas-dev s390x 3.12.0-4 [239 kB] 1505s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libsnappy1v5 s390x 1.2.1-1 [33.0 kB] 1506s Get:42 http://ftpmaster.internal/ubuntu plucky/universe s390x libblosc1 s390x 1.21.5+ds-1build1 [27.7 kB] 1506s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x libbz2-dev s390x 1.0.8-6 [39.1 kB] 1506s Get:44 http://ftpmaster.internal/ubuntu plucky/universe s390x libcfitsio10t64 s390x 4.5.0-5 [607 kB] 1510s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libde265-0 s390x 1.0.15-1build4 [175 kB] 1511s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate-dev s390x 1.23-1 [52.2 kB] 1512s Get:47 http://ftpmaster.internal/ubuntu plucky/universe s390x libfyba0t64 s390x 4.1.1-11build1 [125 kB] 1513s Get:48 http://ftpmaster.internal/ubuntu plucky/universe s390x libminizip1t64 s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [24.6 kB] 1514s Get:49 http://ftpmaster.internal/ubuntu plucky/universe s390x libfreexl1 s390x 2.0.0-1build2 [46.5 kB] 1514s Get:50 http://ftpmaster.internal/ubuntu plucky/universe s390x libgeos3.13.0 s390x 3.13.0-1 [966 kB] 1522s Get:51 http://ftpmaster.internal/ubuntu plucky/universe s390x libgeos-c1t64 s390x 3.13.0-1 [93.3 kB] 1523s Get:52 http://ftpmaster.internal/ubuntu plucky/universe s390x proj-data all 9.5.1-1 [7924 kB] 1598s Get:53 http://ftpmaster.internal/ubuntu plucky/universe s390x libproj25 s390x 9.5.1-1 [1452 kB] 1614s Get:54 http://ftpmaster.internal/ubuntu plucky/universe s390x libgeotiff5 s390x 1.7.3-1 [66.4 kB] 1615s Get:55 http://ftpmaster.internal/ubuntu plucky/main s390x libgif7 s390x 5.2.2-1ubuntu1 [38.0 kB] 1615s Get:56 http://ftpmaster.internal/ubuntu plucky/universe s390x libsz2 s390x 1.1.3-1 [5442 B] 1615s Get:57 http://ftpmaster.internal/ubuntu plucky/universe s390x libhdf4-0-alt s390x 4.3.0-1 [300 kB] 1617s Get:58 http://ftpmaster.internal/ubuntu plucky/universe s390x libhdf5-310 s390x 1.14.5+repack-3 [1477 kB] 1629s Get:59 http://ftpmaster.internal/ubuntu plucky/main s390x libheif-plugin-aomdec s390x 1.19.5-1build1 [11.6 kB] 1629s Get:60 http://ftpmaster.internal/ubuntu plucky/main s390x libheif-plugin-libde265 s390x 1.19.5-1build1 [9066 B] 1629s Get:61 http://ftpmaster.internal/ubuntu plucky/main s390x libheif1 s390x 1.19.5-1build1 [410 kB] 1634s Get:62 http://ftpmaster.internal/ubuntu plucky/universe s390x liburiparser1 s390x 0.9.8+dfsg-2 [42.4 kB] 1634s Get:63 http://ftpmaster.internal/ubuntu plucky/universe s390x libkmlbase1t64 s390x 1.3.0-12build1 [50.5 kB] 1635s Get:64 http://ftpmaster.internal/ubuntu plucky/universe s390x libkmldom1t64 s390x 1.3.0-12build1 [151 kB] 1636s Get:65 http://ftpmaster.internal/ubuntu plucky/universe s390x libkmlengine1t64 s390x 1.3.0-12build1 [68.9 kB] 1637s Get:66 http://ftpmaster.internal/ubuntu plucky/main s390x mysql-common all 5.8+1.1.1 [6800 B] 1637s Get:67 http://ftpmaster.internal/ubuntu plucky/main s390x libmysqlclient24 s390x 8.4.4-0ubuntu1 [1295 kB] 1647s Get:68 http://ftpmaster.internal/ubuntu plucky/universe s390x libhdf5-hl-310 s390x 1.14.5+repack-3 [61.0 kB] 1648s Get:69 http://ftpmaster.internal/ubuntu plucky/universe s390x libnetcdf19t64 s390x 1:4.9.2-6ubuntu2 [497 kB] 1653s Get:70 http://ftpmaster.internal/ubuntu plucky/main s390x libodbc2 s390x 2.3.12-2ubuntu1 [163 kB] 1655s Get:71 http://ftpmaster.internal/ubuntu plucky/main s390x unixodbc-common all 2.3.12-2ubuntu1 [9044 B] 1655s Get:72 http://ftpmaster.internal/ubuntu plucky/main s390x libodbcinst2 s390x 2.3.12-2ubuntu1 [32.2 kB] 1655s Get:73 http://ftpmaster.internal/ubuntu plucky/universe s390x libogdi4.1 s390x 4.1.1+ds-5 [219 kB] 1656s Get:74 http://ftpmaster.internal/ubuntu plucky/main s390x libopenjp2-7 s390x 2.5.0-2ubuntu3 [208 kB] 1659s Get:75 http://ftpmaster.internal/ubuntu plucky/main s390x libgpgmepp6t64 s390x 1.24.1-2ubuntu1 [125 kB] 1661s Get:76 http://ftpmaster.internal/ubuntu plucky/main s390x liblcms2-2 s390x 2.16-2 [175 kB] 1663s Get:77 http://ftpmaster.internal/ubuntu plucky/main s390x libpoppler145 s390x 25.01.0-2 [1231 kB] 1682s Get:78 http://ftpmaster.internal/ubuntu plucky/main s390x libpq5 s390x 17.2-1build2 [146 kB] 1683s Get:79 http://ftpmaster.internal/ubuntu plucky/universe s390x libqhull-r8.0 s390x 2020.2-6build1 [199 kB] 1685s Get:80 http://ftpmaster.internal/ubuntu plucky/universe s390x librttopo1 s390x 1.1.0-3build2 [200 kB] 1686s Get:81 http://ftpmaster.internal/ubuntu plucky/universe s390x libspatialite8t64 s390x 5.1.0-3build1 [2050 kB] 1701s Get:82 http://ftpmaster.internal/ubuntu plucky/universe s390x libxerces-c3.2t64 s390x 3.2.4+debian-1.3build1 [938 kB] 1708s Get:83 http://ftpmaster.internal/ubuntu plucky/universe s390x libgdal36 s390x 3.10.1+dfsg-1build2 [9637 kB] 1799s Get:84 http://ftpmaster.internal/ubuntu plucky/main s390x libicu-dev s390x 76.1-1ubuntu2 [12.2 MB] 1903s Get:85 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8-dev s390x 2.1.5-3ubuntu2 [281 kB] 1904s Get:86 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B] 1904s Get:87 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B] 1904s Get:88 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack-dev s390x 3.12.0-4 [5956 kB] 1938s Get:89 http://ftpmaster.internal/ubuntu plucky/main s390x libncurses-dev s390x 6.5-2 [404 kB] 1943s Get:90 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-16-0 s390x 10.42-4ubuntu3 [236 kB] 1944s Get:91 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-32-0 s390x 10.42-4ubuntu3 [221 kB] 1946s Get:92 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-posix3 s390x 10.42-4ubuntu3 [6820 B] 1946s Get:93 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-dev s390x 10.42-4ubuntu3 [815 kB] 1952s Get:94 http://ftpmaster.internal/ubuntu plucky/main s390x libpkgconf3 s390x 1.8.1-4 [31.2 kB] 1953s Get:95 http://ftpmaster.internal/ubuntu plucky/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB] 1958s Get:96 http://ftpmaster.internal/ubuntu plucky/main s390x libpng-dev s390x 1.6.44-3 [279 kB] 1959s Get:97 http://ftpmaster.internal/ubuntu plucky/main s390x libreadline-dev s390x 8.2-6 [187 kB] 1960s Get:98 http://ftpmaster.internal/ubuntu plucky/universe s390x libudunits2-data all 2.2.28-7build1 [19.4 kB] 1960s Get:99 http://ftpmaster.internal/ubuntu plucky/universe s390x libudunits2-0 s390x 2.2.28-7build1 [57.2 kB] 1960s Get:100 http://ftpmaster.internal/ubuntu plucky/main s390x liblzma-dev s390x 5.6.3-1 [183 kB] 1961s Get:101 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf-bin s390x 1.8.1-4 [21.5 kB] 1961s Get:102 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf s390x 1.8.1-4 [16.7 kB] 1962s Get:103 http://ftpmaster.internal/ubuntu plucky/main s390x libtirpc-dev s390x 1.3.4+ds-1.3 [196 kB] 1962s Get:104 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-dev all 4.4.2-1build1 [4342 B] 1962s Get:105 http://ftpmaster.internal/ubuntu plucky/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 1962s Get:106 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-class s390x 7.3-23-1 [92.0 kB] 1962s Get:107 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-proxy s390x 0.4-27-1 [182 kB] 1963s Get:108 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-e1071 s390x 1.7-16-1 [572 kB] 1963s Get:109 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-kernsmooth s390x 2.23-26-1 [94.7 kB] 1963s Get:110 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-classint s390x 0.4-11+dfsg-1 [108 kB] 1964s Get:111 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-dbi all 1.2.3-1 [853 kB] 1964s Get:112 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-deldir s390x 2.0-4-1build1 [271 kB] 1964s Get:113 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcppeigen s390x 0.3.4.0.2-1 [1429 kB] 1965s Get:114 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-interp s390x 1.1-6-1 [1465 kB] 1965s Get:115 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-maps s390x 3.4.2-1 [2371 kB] 1966s Get:116 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-wk s390x 0.9.4-1 [1801 kB] 1966s Get:117 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-s2 s390x 1.1.7-1 [2086 kB] 1967s Get:118 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-units s390x 0.8-5+dfsg-1 [276 kB] 1967s Get:119 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sf s390x 1.0-19+dfsg-1 [3298 kB] 1968s Get:120 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-spdata all 2.3.1-1 [3757 kB] 1968s Get:121 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-spdep s390x 1.3-5+dfsg-1 [2168 kB] 1969s Fetched 140 MB in 18min 34s (126 kB/s) 1969s Selecting previously unselected package libisl23:s390x. 1969s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 70790 files and directories currently installed.) 1969s Preparing to unpack .../000-libisl23_0.27-1_s390x.deb ... 1969s Unpacking libisl23:s390x (0.27-1) ... 1969s Selecting previously unselected package libmpc3:s390x. 1969s Preparing to unpack .../001-libmpc3_1.3.1-1build2_s390x.deb ... 1969s Unpacking libmpc3:s390x (1.3.1-1build2) ... 1969s Selecting previously unselected package cpp-14-s390x-linux-gnu. 1969s Preparing to unpack .../002-cpp-14-s390x-linux-gnu_14.2.0-13ubuntu1_s390x.deb ... 1969s Unpacking cpp-14-s390x-linux-gnu (14.2.0-13ubuntu1) ... 1969s Selecting previously unselected package cpp-14. 1969s Preparing to unpack .../003-cpp-14_14.2.0-13ubuntu1_s390x.deb ... 1969s Unpacking cpp-14 (14.2.0-13ubuntu1) ... 1969s Selecting previously unselected package cpp-s390x-linux-gnu. 1969s Preparing to unpack .../004-cpp-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ... 1969s Unpacking cpp-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 1969s Selecting previously unselected package cpp. 1969s Preparing to unpack .../005-cpp_4%3a14.1.0-2ubuntu1_s390x.deb ... 1969s Unpacking cpp (4:14.1.0-2ubuntu1) ... 1970s Selecting previously unselected package libcc1-0:s390x. 1970s Preparing to unpack .../006-libcc1-0_14.2.0-13ubuntu1_s390x.deb ... 1970s Unpacking libcc1-0:s390x (14.2.0-13ubuntu1) ... 1970s Selecting previously unselected package libitm1:s390x. 1970s Preparing to unpack .../007-libitm1_14.2.0-13ubuntu1_s390x.deb ... 1970s Unpacking libitm1:s390x (14.2.0-13ubuntu1) ... 1970s Selecting previously unselected package libasan8:s390x. 1970s Preparing to unpack .../008-libasan8_14.2.0-13ubuntu1_s390x.deb ... 1970s Unpacking libasan8:s390x (14.2.0-13ubuntu1) ... 1970s Selecting previously unselected package libubsan1:s390x. 1970s Preparing to unpack .../009-libubsan1_14.2.0-13ubuntu1_s390x.deb ... 1970s Unpacking libubsan1:s390x (14.2.0-13ubuntu1) ... 1970s Selecting previously unselected package libgcc-14-dev:s390x. 1970s Preparing to unpack .../010-libgcc-14-dev_14.2.0-13ubuntu1_s390x.deb ... 1970s Unpacking libgcc-14-dev:s390x (14.2.0-13ubuntu1) ... 1970s Selecting previously unselected package gcc-14-s390x-linux-gnu. 1970s Preparing to unpack .../011-gcc-14-s390x-linux-gnu_14.2.0-13ubuntu1_s390x.deb ... 1970s Unpacking gcc-14-s390x-linux-gnu (14.2.0-13ubuntu1) ... 1970s Selecting previously unselected package gcc-14. 1970s Preparing to unpack .../012-gcc-14_14.2.0-13ubuntu1_s390x.deb ... 1970s Unpacking gcc-14 (14.2.0-13ubuntu1) ... 1970s Selecting previously unselected package gcc-s390x-linux-gnu. 1970s Preparing to unpack .../013-gcc-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ... 1970s Unpacking gcc-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 1970s Selecting previously unselected package gcc. 1970s Preparing to unpack .../014-gcc_4%3a14.1.0-2ubuntu1_s390x.deb ... 1970s Unpacking gcc (4:14.1.0-2ubuntu1) ... 1970s Selecting previously unselected package libstdc++-14-dev:s390x. 1970s Preparing to unpack .../015-libstdc++-14-dev_14.2.0-13ubuntu1_s390x.deb ... 1970s Unpacking libstdc++-14-dev:s390x (14.2.0-13ubuntu1) ... 1970s Selecting previously unselected package g++-14-s390x-linux-gnu. 1970s Preparing to unpack .../016-g++-14-s390x-linux-gnu_14.2.0-13ubuntu1_s390x.deb ... 1970s Unpacking g++-14-s390x-linux-gnu (14.2.0-13ubuntu1) ... 1970s Selecting previously unselected package g++-14. 1970s Preparing to unpack .../017-g++-14_14.2.0-13ubuntu1_s390x.deb ... 1970s Unpacking g++-14 (14.2.0-13ubuntu1) ... 1970s Selecting previously unselected package g++-s390x-linux-gnu. 1970s Preparing to unpack .../018-g++-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ... 1970s Unpacking g++-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 1970s Selecting previously unselected package g++. 1970s Preparing to unpack .../019-g++_4%3a14.1.0-2ubuntu1_s390x.deb ... 1970s Unpacking g++ (4:14.1.0-2ubuntu1) ... 1970s Selecting previously unselected package build-essential. 1970s Preparing to unpack .../020-build-essential_12.10ubuntu1_s390x.deb ... 1970s Unpacking build-essential (12.10ubuntu1) ... 1970s Selecting previously unselected package dctrl-tools. 1970s Preparing to unpack .../021-dctrl-tools_2.24-3build3_s390x.deb ... 1970s Unpacking dctrl-tools (2.24-3build3) ... 1970s Selecting previously unselected package gdal-data. 1970s Preparing to unpack .../022-gdal-data_3.10.1+dfsg-1build2_all.deb ... 1970s Unpacking gdal-data (3.10.1+dfsg-1build2) ... 1970s Selecting previously unselected package gdal-plugins:s390x. 1970s Preparing to unpack .../023-gdal-plugins_3.10.1+dfsg-1build2_s390x.deb ... 1970s Unpacking gdal-plugins:s390x (3.10.1+dfsg-1build2) ... 1970s Selecting previously unselected package libgfortran-14-dev:s390x. 1970s Preparing to unpack .../024-libgfortran-14-dev_14.2.0-13ubuntu1_s390x.deb ... 1970s Unpacking libgfortran-14-dev:s390x (14.2.0-13ubuntu1) ... 1970s Selecting previously unselected package gfortran-14-s390x-linux-gnu. 1970s Preparing to unpack .../025-gfortran-14-s390x-linux-gnu_14.2.0-13ubuntu1_s390x.deb ... 1970s Unpacking gfortran-14-s390x-linux-gnu (14.2.0-13ubuntu1) ... 1970s Selecting previously unselected package gfortran-14. 1970s Preparing to unpack .../026-gfortran-14_14.2.0-13ubuntu1_s390x.deb ... 1970s Unpacking gfortran-14 (14.2.0-13ubuntu1) ... 1970s Selecting previously unselected package gfortran-s390x-linux-gnu. 1970s Preparing to unpack .../027-gfortran-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ... 1970s Unpacking gfortran-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 1970s Selecting previously unselected package gfortran. 1970s Preparing to unpack .../028-gfortran_4%3a14.1.0-2ubuntu1_s390x.deb ... 1970s Unpacking gfortran (4:14.1.0-2ubuntu1) ... 1970s Selecting previously unselected package icu-devtools. 1970s Preparing to unpack .../029-icu-devtools_76.1-1ubuntu2_s390x.deb ... 1970s Unpacking icu-devtools (76.1-1ubuntu2) ... 1970s Selecting previously unselected package libaec0:s390x. 1970s Preparing to unpack .../030-libaec0_1.1.3-1_s390x.deb ... 1970s Unpacking libaec0:s390x (1.1.3-1) ... 1970s Selecting previously unselected package libaom3:s390x. 1970s Preparing to unpack .../031-libaom3_3.11.0-1_s390x.deb ... 1970s Unpacking libaom3:s390x (3.11.0-1) ... 1970s Selecting previously unselected package libarpack2t64:s390x. 1970s Preparing to unpack .../032-libarpack2t64_3.9.1-4_s390x.deb ... 1970s Unpacking libarpack2t64:s390x (3.9.1-4) ... 1970s Selecting previously unselected package libarmadillo14. 1970s Preparing to unpack .../033-libarmadillo14_1%3a14.2.1+dfsg-1_s390x.deb ... 1970s Unpacking libarmadillo14 (1:14.2.1+dfsg-1) ... 1970s Selecting previously unselected package libdav1d7:s390x. 1970s Preparing to unpack .../034-libdav1d7_1.5.1-1_s390x.deb ... 1970s Unpacking libdav1d7:s390x (1.5.1-1) ... 1970s Selecting previously unselected package librav1e0.7:s390x. 1970s Preparing to unpack .../035-librav1e0.7_0.7.1-9_s390x.deb ... 1970s Unpacking librav1e0.7:s390x (0.7.1-9) ... 1970s Selecting previously unselected package libsvtav1enc2:s390x. 1970s Preparing to unpack .../036-libsvtav1enc2_2.3.0+dfsg-1_s390x.deb ... 1970s Unpacking libsvtav1enc2:s390x (2.3.0+dfsg-1) ... 1971s Selecting previously unselected package libyuv0:s390x. 1971s Preparing to unpack .../037-libyuv0_0.0.1899.20250103-1_s390x.deb ... 1971s Unpacking libyuv0:s390x (0.0.1899.20250103-1) ... 1971s Selecting previously unselected package libavif16:s390x. 1971s Preparing to unpack .../038-libavif16_1.1.1-1ubuntu1_s390x.deb ... 1971s Unpacking libavif16:s390x (1.1.1-1ubuntu1) ... 1971s Selecting previously unselected package libblas-dev:s390x. 1971s Preparing to unpack .../039-libblas-dev_3.12.0-4_s390x.deb ... 1971s Unpacking libblas-dev:s390x (3.12.0-4) ... 1971s Selecting previously unselected package libsnappy1v5:s390x. 1971s Preparing to unpack .../040-libsnappy1v5_1.2.1-1_s390x.deb ... 1971s Unpacking libsnappy1v5:s390x (1.2.1-1) ... 1971s Selecting previously unselected package libblosc1:s390x. 1971s Preparing to unpack .../041-libblosc1_1.21.5+ds-1build1_s390x.deb ... 1971s Unpacking libblosc1:s390x (1.21.5+ds-1build1) ... 1971s Selecting previously unselected package libbz2-dev:s390x. 1971s Preparing to unpack .../042-libbz2-dev_1.0.8-6_s390x.deb ... 1971s Unpacking libbz2-dev:s390x (1.0.8-6) ... 1971s Selecting previously unselected package libcfitsio10t64:s390x. 1971s Preparing to unpack .../043-libcfitsio10t64_4.5.0-5_s390x.deb ... 1971s Unpacking libcfitsio10t64:s390x (4.5.0-5) ... 1971s Selecting previously unselected package libde265-0:s390x. 1971s Preparing to unpack .../044-libde265-0_1.0.15-1build4_s390x.deb ... 1971s Unpacking libde265-0:s390x (1.0.15-1build4) ... 1971s Selecting previously unselected package libdeflate-dev:s390x. 1971s Preparing to unpack .../045-libdeflate-dev_1.23-1_s390x.deb ... 1971s Unpacking libdeflate-dev:s390x (1.23-1) ... 1971s Selecting previously unselected package libfyba0t64:s390x. 1971s Preparing to unpack .../046-libfyba0t64_4.1.1-11build1_s390x.deb ... 1971s Unpacking libfyba0t64:s390x (4.1.1-11build1) ... 1971s Selecting previously unselected package libminizip1t64:s390x. 1971s Preparing to unpack .../047-libminizip1t64_1%3a1.3.dfsg+really1.3.1-1ubuntu1_s390x.deb ... 1971s Unpacking libminizip1t64:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 1971s Selecting previously unselected package libfreexl1:s390x. 1971s Preparing to unpack .../048-libfreexl1_2.0.0-1build2_s390x.deb ... 1971s Unpacking libfreexl1:s390x (2.0.0-1build2) ... 1971s Selecting previously unselected package libgeos3.13.0:s390x. 1971s Preparing to unpack .../049-libgeos3.13.0_3.13.0-1_s390x.deb ... 1971s Unpacking libgeos3.13.0:s390x (3.13.0-1) ... 1971s Selecting previously unselected package libgeos-c1t64:s390x. 1971s Preparing to unpack .../050-libgeos-c1t64_3.13.0-1_s390x.deb ... 1971s Unpacking libgeos-c1t64:s390x (3.13.0-1) ... 1971s Selecting previously unselected package proj-data. 1971s Preparing to unpack .../051-proj-data_9.5.1-1_all.deb ... 1971s Unpacking proj-data (9.5.1-1) ... 1971s Selecting previously unselected package libproj25:s390x. 1971s Preparing to unpack .../052-libproj25_9.5.1-1_s390x.deb ... 1971s Unpacking libproj25:s390x (9.5.1-1) ... 1971s Selecting previously unselected package libgeotiff5:s390x. 1971s Preparing to unpack .../053-libgeotiff5_1.7.3-1_s390x.deb ... 1971s Unpacking libgeotiff5:s390x (1.7.3-1) ... 1971s Selecting previously unselected package libgif7:s390x. 1971s Preparing to unpack .../054-libgif7_5.2.2-1ubuntu1_s390x.deb ... 1971s Unpacking libgif7:s390x (5.2.2-1ubuntu1) ... 1971s Selecting previously unselected package libsz2:s390x. 1971s Preparing to unpack .../055-libsz2_1.1.3-1_s390x.deb ... 1971s Unpacking libsz2:s390x (1.1.3-1) ... 1971s Selecting previously unselected package libhdf4-0-alt:s390x. 1971s Preparing to unpack .../056-libhdf4-0-alt_4.3.0-1_s390x.deb ... 1971s Unpacking libhdf4-0-alt:s390x (4.3.0-1) ... 1971s Selecting previously unselected package libhdf5-310:s390x. 1971s Preparing to unpack .../057-libhdf5-310_1.14.5+repack-3_s390x.deb ... 1971s Unpacking libhdf5-310:s390x (1.14.5+repack-3) ... 1971s Selecting previously unselected package libheif-plugin-aomdec:s390x. 1971s Preparing to unpack .../058-libheif-plugin-aomdec_1.19.5-1build1_s390x.deb ... 1971s Unpacking libheif-plugin-aomdec:s390x (1.19.5-1build1) ... 1971s Selecting previously unselected package libheif-plugin-libde265:s390x. 1971s Preparing to unpack .../059-libheif-plugin-libde265_1.19.5-1build1_s390x.deb ... 1971s Unpacking libheif-plugin-libde265:s390x (1.19.5-1build1) ... 1971s Selecting previously unselected package libheif1:s390x. 1971s Preparing to unpack .../060-libheif1_1.19.5-1build1_s390x.deb ... 1971s Unpacking libheif1:s390x (1.19.5-1build1) ... 1971s Selecting previously unselected package liburiparser1:s390x. 1971s Preparing to unpack .../061-liburiparser1_0.9.8+dfsg-2_s390x.deb ... 1971s Unpacking liburiparser1:s390x (0.9.8+dfsg-2) ... 1971s Selecting previously unselected package libkmlbase1t64:s390x. 1971s Preparing to unpack .../062-libkmlbase1t64_1.3.0-12build1_s390x.deb ... 1971s Unpacking libkmlbase1t64:s390x (1.3.0-12build1) ... 1971s Selecting previously unselected package libkmldom1t64:s390x. 1971s Preparing to unpack .../063-libkmldom1t64_1.3.0-12build1_s390x.deb ... 1971s Unpacking libkmldom1t64:s390x (1.3.0-12build1) ... 1971s Selecting previously unselected package libkmlengine1t64:s390x. 1971s Preparing to unpack .../064-libkmlengine1t64_1.3.0-12build1_s390x.deb ... 1971s Unpacking libkmlengine1t64:s390x (1.3.0-12build1) ... 1971s Selecting previously unselected package mysql-common. 1971s Preparing to unpack .../065-mysql-common_5.8+1.1.1_all.deb ... 1971s Unpacking mysql-common (5.8+1.1.1) ... 1971s Selecting previously unselected package libmysqlclient24:s390x. 1971s Preparing to unpack .../066-libmysqlclient24_8.4.4-0ubuntu1_s390x.deb ... 1971s Unpacking libmysqlclient24:s390x (8.4.4-0ubuntu1) ... 1971s Selecting previously unselected package libhdf5-hl-310:s390x. 1971s Preparing to unpack .../067-libhdf5-hl-310_1.14.5+repack-3_s390x.deb ... 1971s Unpacking libhdf5-hl-310:s390x (1.14.5+repack-3) ... 1971s Selecting previously unselected package libnetcdf19t64:s390x. 1971s Preparing to unpack .../068-libnetcdf19t64_1%3a4.9.2-6ubuntu2_s390x.deb ... 1971s Unpacking libnetcdf19t64:s390x (1:4.9.2-6ubuntu2) ... 1971s Selecting previously unselected package libodbc2:s390x. 1971s Preparing to unpack .../069-libodbc2_2.3.12-2ubuntu1_s390x.deb ... 1971s Unpacking libodbc2:s390x (2.3.12-2ubuntu1) ... 1971s Selecting previously unselected package unixodbc-common. 1971s Preparing to unpack .../070-unixodbc-common_2.3.12-2ubuntu1_all.deb ... 1971s Unpacking unixodbc-common (2.3.12-2ubuntu1) ... 1971s Selecting previously unselected package libodbcinst2:s390x. 1971s Preparing to unpack .../071-libodbcinst2_2.3.12-2ubuntu1_s390x.deb ... 1971s Unpacking libodbcinst2:s390x (2.3.12-2ubuntu1) ... 1971s Selecting previously unselected package libogdi4.1:s390x. 1971s Preparing to unpack .../072-libogdi4.1_4.1.1+ds-5_s390x.deb ... 1971s Unpacking libogdi4.1:s390x (4.1.1+ds-5) ... 1971s Selecting previously unselected package libopenjp2-7:s390x. 1971s Preparing to unpack .../073-libopenjp2-7_2.5.0-2ubuntu3_s390x.deb ... 1971s Unpacking libopenjp2-7:s390x (2.5.0-2ubuntu3) ... 1971s Selecting previously unselected package libgpgmepp6t64:s390x. 1971s Preparing to unpack .../074-libgpgmepp6t64_1.24.1-2ubuntu1_s390x.deb ... 1971s Unpacking libgpgmepp6t64:s390x (1.24.1-2ubuntu1) ... 1971s Selecting previously unselected package liblcms2-2:s390x. 1971s Preparing to unpack .../075-liblcms2-2_2.16-2_s390x.deb ... 1971s Unpacking liblcms2-2:s390x (2.16-2) ... 1971s Selecting previously unselected package libpoppler145:s390x. 1971s Preparing to unpack .../076-libpoppler145_25.01.0-2_s390x.deb ... 1971s Unpacking libpoppler145:s390x (25.01.0-2) ... 1971s Selecting previously unselected package libpq5:s390x. 1971s Preparing to unpack .../077-libpq5_17.2-1build2_s390x.deb ... 1971s Unpacking libpq5:s390x (17.2-1build2) ... 1971s Selecting previously unselected package libqhull-r8.0:s390x. 1971s Preparing to unpack .../078-libqhull-r8.0_2020.2-6build1_s390x.deb ... 1971s Unpacking libqhull-r8.0:s390x (2020.2-6build1) ... 1971s Selecting previously unselected package librttopo1:s390x. 1971s Preparing to unpack .../079-librttopo1_1.1.0-3build2_s390x.deb ... 1971s Unpacking librttopo1:s390x (1.1.0-3build2) ... 1971s Selecting previously unselected package libspatialite8t64:s390x. 1971s Preparing to unpack .../080-libspatialite8t64_5.1.0-3build1_s390x.deb ... 1971s Unpacking libspatialite8t64:s390x (5.1.0-3build1) ... 1971s Selecting previously unselected package libxerces-c3.2t64:s390x. 1971s Preparing to unpack .../081-libxerces-c3.2t64_3.2.4+debian-1.3build1_s390x.deb ... 1971s Unpacking libxerces-c3.2t64:s390x (3.2.4+debian-1.3build1) ... 1971s Selecting previously unselected package libgdal36:s390x. 1971s Preparing to unpack .../082-libgdal36_3.10.1+dfsg-1build2_s390x.deb ... 1971s Unpacking libgdal36:s390x (3.10.1+dfsg-1build2) ... 1971s Selecting previously unselected package libicu-dev:s390x. 1971s Preparing to unpack .../083-libicu-dev_76.1-1ubuntu2_s390x.deb ... 1971s Unpacking libicu-dev:s390x (76.1-1ubuntu2) ... 1972s Selecting previously unselected package libjpeg-turbo8-dev:s390x. 1972s Preparing to unpack .../084-libjpeg-turbo8-dev_2.1.5-3ubuntu2_s390x.deb ... 1972s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ... 1972s Selecting previously unselected package libjpeg8-dev:s390x. 1972s Preparing to unpack .../085-libjpeg8-dev_8c-2ubuntu11_s390x.deb ... 1972s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ... 1972s Selecting previously unselected package libjpeg-dev:s390x. 1972s Preparing to unpack .../086-libjpeg-dev_8c-2ubuntu11_s390x.deb ... 1972s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ... 1972s Selecting previously unselected package liblapack-dev:s390x. 1972s Preparing to unpack .../087-liblapack-dev_3.12.0-4_s390x.deb ... 1972s Unpacking liblapack-dev:s390x (3.12.0-4) ... 1972s Selecting previously unselected package libncurses-dev:s390x. 1972s Preparing to unpack .../088-libncurses-dev_6.5-2_s390x.deb ... 1972s Unpacking libncurses-dev:s390x (6.5-2) ... 1972s Selecting previously unselected package libpcre2-16-0:s390x. 1972s Preparing to unpack .../089-libpcre2-16-0_10.42-4ubuntu3_s390x.deb ... 1972s Unpacking libpcre2-16-0:s390x (10.42-4ubuntu3) ... 1972s Selecting previously unselected package libpcre2-32-0:s390x. 1972s Preparing to unpack .../090-libpcre2-32-0_10.42-4ubuntu3_s390x.deb ... 1972s Unpacking libpcre2-32-0:s390x (10.42-4ubuntu3) ... 1972s Selecting previously unselected package libpcre2-posix3:s390x. 1972s Preparing to unpack .../091-libpcre2-posix3_10.42-4ubuntu3_s390x.deb ... 1972s Unpacking libpcre2-posix3:s390x (10.42-4ubuntu3) ... 1972s Selecting previously unselected package libpcre2-dev:s390x. 1972s Preparing to unpack .../092-libpcre2-dev_10.42-4ubuntu3_s390x.deb ... 1972s Unpacking libpcre2-dev:s390x (10.42-4ubuntu3) ... 1972s Selecting previously unselected package libpkgconf3:s390x. 1972s Preparing to unpack .../093-libpkgconf3_1.8.1-4_s390x.deb ... 1972s Unpacking libpkgconf3:s390x (1.8.1-4) ... 1972s Selecting previously unselected package zlib1g-dev:s390x. 1972s Preparing to unpack .../094-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_s390x.deb ... 1972s Unpacking zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 1972s Selecting previously unselected package libpng-dev:s390x. 1972s Preparing to unpack .../095-libpng-dev_1.6.44-3_s390x.deb ... 1972s Unpacking libpng-dev:s390x (1.6.44-3) ... 1972s Selecting previously unselected package libreadline-dev:s390x. 1972s Preparing to unpack .../096-libreadline-dev_8.2-6_s390x.deb ... 1972s Unpacking libreadline-dev:s390x (8.2-6) ... 1972s Selecting previously unselected package libudunits2-data. 1972s Preparing to unpack .../097-libudunits2-data_2.2.28-7build1_all.deb ... 1972s Unpacking libudunits2-data (2.2.28-7build1) ... 1972s Selecting previously unselected package libudunits2-0. 1972s Preparing to unpack .../098-libudunits2-0_2.2.28-7build1_s390x.deb ... 1972s Unpacking libudunits2-0 (2.2.28-7build1) ... 1972s Selecting previously unselected package liblzma-dev:s390x. 1972s Preparing to unpack .../099-liblzma-dev_5.6.3-1_s390x.deb ... 1972s Unpacking liblzma-dev:s390x (5.6.3-1) ... 1972s Selecting previously unselected package pkgconf-bin. 1972s Preparing to unpack .../100-pkgconf-bin_1.8.1-4_s390x.deb ... 1972s Unpacking pkgconf-bin (1.8.1-4) ... 1972s Selecting previously unselected package pkgconf:s390x. 1972s Preparing to unpack .../101-pkgconf_1.8.1-4_s390x.deb ... 1972s Unpacking pkgconf:s390x (1.8.1-4) ... 1972s Selecting previously unselected package libtirpc-dev:s390x. 1972s Preparing to unpack .../102-libtirpc-dev_1.3.4+ds-1.3_s390x.deb ... 1972s Unpacking libtirpc-dev:s390x (1.3.4+ds-1.3) ... 1972s Selecting previously unselected package r-base-dev. 1972s Preparing to unpack .../103-r-base-dev_4.4.2-1build1_all.deb ... 1972s Unpacking r-base-dev (4.4.2-1build1) ... 1972s Selecting previously unselected package pkg-r-autopkgtest. 1972s Preparing to unpack .../104-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 1972s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 1972s Selecting previously unselected package r-cran-class. 1972s Preparing to unpack .../105-r-cran-class_7.3-23-1_s390x.deb ... 1972s Unpacking r-cran-class (7.3-23-1) ... 1972s Selecting previously unselected package r-cran-proxy. 1972s Preparing to unpack .../106-r-cran-proxy_0.4-27-1_s390x.deb ... 1972s Unpacking r-cran-proxy (0.4-27-1) ... 1972s Selecting previously unselected package r-cran-e1071. 1972s Preparing to unpack .../107-r-cran-e1071_1.7-16-1_s390x.deb ... 1972s Unpacking r-cran-e1071 (1.7-16-1) ... 1972s Selecting previously unselected package r-cran-kernsmooth. 1972s Preparing to unpack .../108-r-cran-kernsmooth_2.23-26-1_s390x.deb ... 1972s Unpacking r-cran-kernsmooth (2.23-26-1) ... 1972s Selecting previously unselected package r-cran-classint. 1972s Preparing to unpack .../109-r-cran-classint_0.4-11+dfsg-1_s390x.deb ... 1972s Unpacking r-cran-classint (0.4-11+dfsg-1) ... 1972s Selecting previously unselected package r-cran-dbi. 1972s Preparing to unpack .../110-r-cran-dbi_1.2.3-1_all.deb ... 1972s Unpacking r-cran-dbi (1.2.3-1) ... 1972s Selecting previously unselected package r-cran-deldir. 1972s Preparing to unpack .../111-r-cran-deldir_2.0-4-1build1_s390x.deb ... 1972s Unpacking r-cran-deldir (2.0-4-1build1) ... 1972s Selecting previously unselected package r-cran-rcppeigen. 1972s Preparing to unpack .../112-r-cran-rcppeigen_0.3.4.0.2-1_s390x.deb ... 1972s Unpacking r-cran-rcppeigen (0.3.4.0.2-1) ... 1972s Selecting previously unselected package r-cran-interp. 1972s Preparing to unpack .../113-r-cran-interp_1.1-6-1_s390x.deb ... 1972s Unpacking r-cran-interp (1.1-6-1) ... 1972s Selecting previously unselected package r-cran-maps. 1972s Preparing to unpack .../114-r-cran-maps_3.4.2-1_s390x.deb ... 1972s Unpacking r-cran-maps (3.4.2-1) ... 1972s Selecting previously unselected package r-cran-wk. 1972s Preparing to unpack .../115-r-cran-wk_0.9.4-1_s390x.deb ... 1972s Unpacking r-cran-wk (0.9.4-1) ... 1972s Selecting previously unselected package r-cran-s2. 1972s Preparing to unpack .../116-r-cran-s2_1.1.7-1_s390x.deb ... 1972s Unpacking r-cran-s2 (1.1.7-1) ... 1972s Selecting previously unselected package r-cran-units. 1972s Preparing to unpack .../117-r-cran-units_0.8-5+dfsg-1_s390x.deb ... 1972s Unpacking r-cran-units (0.8-5+dfsg-1) ... 1972s Selecting previously unselected package r-cran-sf. 1972s Preparing to unpack .../118-r-cran-sf_1.0-19+dfsg-1_s390x.deb ... 1972s Unpacking r-cran-sf (1.0-19+dfsg-1) ... 1972s Selecting previously unselected package r-cran-spdata. 1972s Preparing to unpack .../119-r-cran-spdata_2.3.1-1_all.deb ... 1972s Unpacking r-cran-spdata (2.3.1-1) ... 1972s Selecting previously unselected package r-cran-spdep. 1972s Preparing to unpack .../120-r-cran-spdep_1.3-5+dfsg-1_s390x.deb ... 1972s Unpacking r-cran-spdep (1.3-5+dfsg-1) ... 1972s Setting up liblcms2-2:s390x (2.16-2) ... 1972s Setting up libgpgmepp6t64:s390x (1.24.1-2ubuntu1) ... 1972s Setting up libaom3:s390x (3.11.0-1) ... 1972s Setting up mysql-common (5.8+1.1.1) ... 1972s update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode 1972s Setting up libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ... 1972s Setting up r-cran-maps (3.4.2-1) ... 1972s Setting up libncurses-dev:s390x (6.5-2) ... 1972s Setting up libarpack2t64:s390x (3.9.1-4) ... 1972s Setting up proj-data (9.5.1-1) ... 1972s Setting up r-cran-class (7.3-23-1) ... 1972s Setting up libproj25:s390x (9.5.1-1) ... 1972s Setting up libogdi4.1:s390x (4.1.1+ds-5) ... 1972s Setting up libgeos3.13.0:s390x (3.13.0-1) ... 1972s Setting up r-cran-dbi (1.2.3-1) ... 1972s Setting up libpq5:s390x (17.2-1build2) ... 1972s Setting up libqhull-r8.0:s390x (2020.2-6build1) ... 1972s Setting up libreadline-dev:s390x (8.2-6) ... 1972s Setting up libxerces-c3.2t64:s390x (3.2.4+debian-1.3build1) ... 1972s Setting up libmysqlclient24:s390x (8.4.4-0ubuntu1) ... 1972s Setting up libpcre2-16-0:s390x (10.42-4ubuntu3) ... 1972s Setting up libaec0:s390x (1.1.3-1) ... 1972s Setting up gdal-data (3.10.1+dfsg-1build2) ... 1972s Setting up libgeotiff5:s390x (1.7.3-1) ... 1972s Setting up r-cran-deldir (2.0-4-1build1) ... 1972s Setting up libsnappy1v5:s390x (1.2.1-1) ... 1972s Setting up libpcre2-32-0:s390x (10.42-4ubuntu3) ... 1972s Setting up libtirpc-dev:s390x (1.3.4+ds-1.3) ... 1972s Setting up libpkgconf3:s390x (1.8.1-4) ... 1972s Setting up libcfitsio10t64:s390x (4.5.0-5) ... 1972s Setting up r-cran-spdata (2.3.1-1) ... 1972s Setting up libsvtav1enc2:s390x (2.3.0+dfsg-1) ... 1972s Setting up libmpc3:s390x (1.3.1-1build2) ... 1972s Setting up icu-devtools (76.1-1ubuntu2) ... 1972s Setting up unixodbc-common (2.3.12-2ubuntu1) ... 1972s Setting up pkgconf-bin (1.8.1-4) ... 1972s Setting up r-cran-kernsmooth (2.23-26-1) ... 1972s Setting up liblzma-dev:s390x (5.6.3-1) ... 1972s Setting up libubsan1:s390x (14.2.0-13ubuntu1) ... 1972s Setting up libgif7:s390x (5.2.2-1ubuntu1) ... 1972s Setting up zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 1972s Setting up libodbc2:s390x (2.3.12-2ubuntu1) ... 1972s Setting up liburiparser1:s390x (0.9.8+dfsg-2) ... 1972s Setting up libpcre2-posix3:s390x (10.42-4ubuntu3) ... 1972s Setting up libfyba0t64:s390x (4.1.1-11build1) ... 1972s Setting up libudunits2-data (2.2.28-7build1) ... 1972s Setting up libdav1d7:s390x (1.5.1-1) ... 1972s Setting up libminizip1t64:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 1972s Setting up librav1e0.7:s390x (0.7.1-9) ... 1972s Setting up libasan8:s390x (14.2.0-13ubuntu1) ... 1972s Setting up libblosc1:s390x (1.21.5+ds-1build1) ... 1972s Setting up libopenjp2-7:s390x (2.5.0-2ubuntu3) ... 1972s Setting up libarmadillo14 (1:14.2.1+dfsg-1) ... 1972s Setting up r-cran-wk (0.9.4-1) ... 1972s Setting up r-cran-proxy (0.4-27-1) ... 1972s Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ... 1972s Setting up libisl23:s390x (0.27-1) ... 1972s Setting up libde265-0:s390x (1.0.15-1build4) ... 1972s Setting up libkmlbase1t64:s390x (1.3.0-12build1) ... 1972s Setting up libdeflate-dev:s390x (1.23-1) ... 1972s Setting up libyuv0:s390x (0.0.1899.20250103-1) ... 1972s Setting up libicu-dev:s390x (76.1-1ubuntu2) ... 1972s Setting up libcc1-0:s390x (14.2.0-13ubuntu1) ... 1972s Setting up libblas-dev:s390x (3.12.0-4) ... 1972s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so to provide /usr/lib/s390x-linux-gnu/libblas.so (libblas.so-s390x-linux-gnu) in auto mode 1972s Setting up libsz2:s390x (1.1.3-1) ... 1972s Setting up dctrl-tools (2.24-3build3) ... 1972s Setting up libitm1:s390x (14.2.0-13ubuntu1) ... 1972s Setting up r-cran-rcppeigen (0.3.4.0.2-1) ... 1972s Setting up gdal-plugins:s390x (3.10.1+dfsg-1build2) ... 1972s Setting up libbz2-dev:s390x (1.0.8-6) ... 1972s Setting up libpoppler145:s390x (25.01.0-2) ... 1972s Setting up libodbcinst2:s390x (2.3.12-2ubuntu1) ... 1972s Setting up libavif16:s390x (1.1.1-1ubuntu1) ... 1972s Setting up libudunits2-0 (2.2.28-7build1) ... 1972s Setting up libpcre2-dev:s390x (10.42-4ubuntu3) ... 1972s Setting up libgeos-c1t64:s390x (3.13.0-1) ... 1972s Setting up r-cran-s2 (1.1.7-1) ... 1972s Setting up libpng-dev:s390x (1.6.44-3) ... 1972s Setting up libjpeg-dev:s390x (8c-2ubuntu11) ... 1972s Setting up pkgconf:s390x (1.8.1-4) ... 1972s Setting up libkmldom1t64:s390x (1.3.0-12build1) ... 1972s Setting up r-cran-interp (1.1-6-1) ... 1972s Setting up liblapack-dev:s390x (3.12.0-4) ... 1972s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode 1972s Setting up r-cran-e1071 (1.7-16-1) ... 1972s Setting up r-cran-units (0.8-5+dfsg-1) ... 1972s Setting up cpp-14-s390x-linux-gnu (14.2.0-13ubuntu1) ... 1972s Setting up cpp-14 (14.2.0-13ubuntu1) ... 1972s Setting up libhdf4-0-alt:s390x (4.3.0-1) ... 1972s Setting up librttopo1:s390x (1.1.0-3build2) ... 1972s Setting up libhdf5-310:s390x (1.14.5+repack-3) ... 1972s Setting up libfreexl1:s390x (2.0.0-1build2) ... 1972s Setting up libgcc-14-dev:s390x (14.2.0-13ubuntu1) ... 1972s Setting up libstdc++-14-dev:s390x (14.2.0-13ubuntu1) ... 1972s Setting up libspatialite8t64:s390x (5.1.0-3build1) ... 1972s Setting up libgfortran-14-dev:s390x (14.2.0-13ubuntu1) ... 1972s Setting up libhdf5-hl-310:s390x (1.14.5+repack-3) ... 1972s Setting up libnetcdf19t64:s390x (1:4.9.2-6ubuntu2) ... 1972s Setting up cpp-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 1972s Setting up libkmlengine1t64:s390x (1.3.0-12build1) ... 1972s Setting up gcc-14-s390x-linux-gnu (14.2.0-13ubuntu1) ... 1972s Setting up gcc-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 1972s Setting up r-cran-classint (0.4-11+dfsg-1) ... 1972s Setting up g++-14-s390x-linux-gnu (14.2.0-13ubuntu1) ... 1972s Setting up cpp (4:14.1.0-2ubuntu1) ... 1972s Setting up gfortran-14-s390x-linux-gnu (14.2.0-13ubuntu1) ... 1972s Setting up g++-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 1972s Setting up gcc-14 (14.2.0-13ubuntu1) ... 1972s Setting up g++-14 (14.2.0-13ubuntu1) ... 1972s Setting up gfortran-14 (14.2.0-13ubuntu1) ... 1972s Setting up gfortran-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 1972s Setting up gcc (4:14.1.0-2ubuntu1) ... 1972s Setting up g++ (4:14.1.0-2ubuntu1) ... 1972s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 1972s Setting up build-essential (12.10ubuntu1) ... 1972s Setting up gfortran (4:14.1.0-2ubuntu1) ... 1972s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 1972s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 1972s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 1972s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 1972s Setting up r-base-dev (4.4.2-1build1) ... 1972s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 1972s Setting up libheif1:s390x (1.19.5-1build1) ... 1972s Setting up libgdal36:s390x (3.10.1+dfsg-1build2) ... 1972s Setting up r-cran-sf (1.0-19+dfsg-1) ... 1972s Setting up r-cran-spdep (1.3-5+dfsg-1) ... 1972s Setting up libheif-plugin-aomdec:s390x (1.19.5-1build1) ... 1972s Setting up libheif-plugin-libde265:s390x (1.19.5-1build1) ... 1972s Processing triggers for libc-bin (2.40-4ubuntu1) ... 1972s Processing triggers for man-db (2.13.0-1) ... 1973s Processing triggers for install-info (7.1.1-1) ... 1973s autopkgtest: DBG: testbed command exited with code 0 1973s autopkgtest: DBG: testbed command ['dpkg-query', '--show', '-f', '${Status}', 'r-cran-adegenet'], kind short, sout pipe, serr pipe, env [] 1974s autopkgtest: DBG: testbed command exited with code 0 1974s autopkgtest: DBG: testbed command ['sh', '-ec', "dpkg-query --show -f '${Package}\\t${Version}\\n' > /tmp/autopkgtest.3p55QY/pkg-r-autopkgtest-packages.all"], kind short, sout raw, serr pipe, env [] 1974s autopkgtest: DBG: testbed command exited with code 0 1974s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.3p55QY/pkg-r-autopkgtest-packages.all /tmp/autopkgtest-work.juq5n6la/out/pkg-r-autopkgtest-packages.all 1974s autopkgtest: DBG: got reply from testbed: ok 1974s autopkgtest: DBG: testbed command ['test', '-e', '/tmp/autopkgtest.3p55QY/build.RAV/src'], kind short, sout raw, serr raw, env [] 1974s autopkgtest: DBG: testbed command exited with code 0 1974s autopkgtest: DBG: copydown: tb path /tmp/autopkgtest.3p55QY/build.RAV/src already exists 1974s autopkgtest [22:23:02]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 1974s autopkgtest [22:23:02]: test pkg-r-autopkgtest: [----------------------- 1974s autopkgtest: DBG: testbed command ['su', '-s', '/bin/bash', 'ubuntu', '-c', 'set -e; exec /tmp/autopkgtest.3p55QY/wrapper.sh --debug --artifacts=/tmp/autopkgtest.3p55QY/pkg-r-autopkgtest-artifacts --chdir=/tmp/autopkgtest.3p55QY/build.RAV/src --env=AUTOPKGTEST_TESTBED_ARCH=s390x --env=AUTOPKGTEST_TEST_ARCH=s390x --env=DEB_BUILD_OPTIONS=parallel=2 --env=DEBIAN_FRONTEND=noninteractive --env=LANG=C.UTF-8 --unset-env=LANGUAGE --unset-env=LC_ADDRESS --unset-env=LC_ALL --unset-env=LC_COLLATE --unset-env=LC_CTYPE --unset-env=LC_IDENTIFICATION --unset-env=LC_MEASUREMENT --unset-env=LC_MESSAGES --unset-env=LC_MONETARY --unset-env=LC_NAME --unset-env=LC_NUMERIC --unset-env=LC_PAPER --unset-env=LC_TELEPHONE --unset-env=LC_TIME --script-pid-file=/tmp/autopkgtest_script_pid --source-profile --stderr=/tmp/autopkgtest.3p55QY/pkg-r-autopkgtest-stderr --stdout=/tmp/autopkgtest.3p55QY/pkg-r-autopkgtest-stdout --tmp=/tmp/autopkgtest.3p55QY/autopkgtest_tmp --env=ADT_TEST_TRIGGERS=r-cran-testthat/3.2.3-1 -- bash -ec /usr/share/dh-r/pkg-r-autopkgtest'], kind test, sout raw, serr raw, env [] 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: creating AUTOPKGTEST_ARTIFACTS: /tmp/autopkgtest.3p55QY/pkg-r-autopkgtest-artifacts 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: changing to directory: /tmp/autopkgtest.3p55QY/build.RAV/src 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: setting environment: AUTOPKGTEST_TESTBED_ARCH=s390x 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: setting environment: AUTOPKGTEST_TEST_ARCH=s390x 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: setting environment: DEB_BUILD_OPTIONS=parallel=2 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: setting environment: DEBIAN_FRONTEND=noninteractive 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: setting environment: LANG=C.UTF-8 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LANGUAGE 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_ADDRESS 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_ALL 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_COLLATE 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_CTYPE 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_IDENTIFICATION 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_MEASUREMENT 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_MESSAGES 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_MONETARY 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_NAME 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_NUMERIC 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_PAPER 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_TELEPHONE 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: unsetting environment: LC_TIME 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: will create pid file: /tmp/autopkgtest_script_pid 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: pretending to be a login shell 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: will write standard error to /tmp/autopkgtest.3p55QY/pkg-r-autopkgtest-stderr 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: will write stdout to /tmp/autopkgtest.3p55QY/pkg-r-autopkgtest-stdout 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: creating AUTOPKGTEST_TMP: /tmp/autopkgtest.3p55QY/autopkgtest_tmp 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: setting environment: ADT_TEST_TRIGGERS=r-cran-testthat/3.2.3-1 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: command to run: bash -ec /usr/share/dh-r/pkg-r-autopkgtest 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: copying /tmp/tmp.7eaJMyHVE1/out to stdout and file: /tmp/autopkgtest.3p55QY/pkg-r-autopkgtest-stdout 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: copying /tmp/tmp.7eaJMyHVE1/err to standard error and file: /tmp/autopkgtest.3p55QY/pkg-r-autopkgtest-stdout 1975s /tmp/autopkgtest.3p55QY/wrapper.sh: writing script pid 4790 to /tmp/autopkgtest_script_pid 1975s Test: Try to load the R library adegenet 1975s 1975s R version 4.4.2 (2024-10-31) -- "Pile of Leaves" 1975s Copyright (C) 2024 The R Foundation for Statistical Computing 1975s Platform: s390x-ibm-linux-gnu 1975s 1975s R is free software and comes with ABSOLUTELY NO WARRANTY. 1975s You are welcome to redistribute it under certain conditions. 1975s Type 'license()' or 'licence()' for distribution details. 1975s 1975s R is a collaborative project with many contributors. 1975s Type 'contributors()' for more information and 1975s 'citation()' on how to cite R or R packages in publications. 1975s 1975s Type 'demo()' for some demos, 'help()' for on-line help, or 1975s 'help.start()' for an HTML browser interface to help. 1975s Type 'q()' to quit R. 1975s 1975s > library('adegenet') 1975s Loading required package: ade4 1976s 1976s /// adegenet 2.1.10 is loaded //////////// 1976s 1976s > overview: '?adegenet' 1976s > tutorials/doc/questions: 'adegenetWeb()' 1976s > b> ug reports/feature requests: adegenetIssues() 1976s 1976s 1976s 1976s > 1976s /tmp/autopkgtest.3p55QY/wrapper.sh: checking for leaked background processes... 1976s Other tests are currently unsupported! 1976s They will be progressively added. 1976s /tmp/autopkgtest.3p55QY/wrapper.sh: waiting for tee/cat subprocesses... 1976s /tmp/autopkgtest.3p55QY/wrapper.sh: cleaning up... 1976s /tmp/autopkgtest.3p55QY/wrapper.sh: Exit status: 0 1976s autopkgtest: DBG: testbed command exited with code 0 1976s autopkgtest [22:23:04]: test pkg-r-autopkgtest: -----------------------] 1976s autopkgtest: DBG: testbed executing test finished with exit status 0 1976s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.3p55QY/pkg-r-autopkgtest-stdout /tmp/autopkgtest-work.juq5n6la/out/pkg-r-autopkgtest-stdout 1977s autopkgtest: DBG: got reply from testbed: ok 1977s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.3p55QY/pkg-r-autopkgtest-stderr /tmp/autopkgtest-work.juq5n6la/out/pkg-r-autopkgtest-stderr 1977s autopkgtest: DBG: got reply from testbed: ok 1977s autopkgtest [22:23:05]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 1977s pkg-r-autopkgtest PASS 1977s autopkgtest: DBG: sending command to testbed: copyup /tmp/autopkgtest.3p55QY/pkg-r-autopkgtest-artifacts/ /tmp/autopkgtest-work.juq5n6la/out/artifacts/ 1978s autopkgtest: DBG: got reply from testbed: ok 1978s autopkgtest: DBG: testbed command ['rm', '-rf', '/tmp/autopkgtest.3p55QY/pkg-r-autopkgtest-artifacts', '/tmp/autopkgtest.3p55QY/autopkgtest_tmp'], kind short, sout raw, serr pipe, env [] 1978s autopkgtest: DBG: testbed command exited with code 0 1978s autopkgtest: DBG: needs_reset, previously=False, requested by run_tests() line 230 1978s autopkgtest [22:23:06]: @@@@@@@@@@@@@@@@@@@@ summary 1978s run-unit-test PASS 1978s pkg-r-autopkgtest PASS 1978s autopkgtest: DBG: testbed stop 1978s autopkgtest: DBG: testbed close, scratch=/tmp/autopkgtest.3p55QY 1978s autopkgtest: DBG: sending command to testbed: close 1996s autopkgtest: DBG: got reply from testbed: ok 1996s autopkgtest: DBG: sending command to testbed: quit 1996s nova [W] Using flock in prodstack6-s390x 1996s Creating nova instance adt-plucky-s390x-r-cran-adegenet-20250203-215008-juju-7f2275-prod-proposed-migration-environment-15-f1dfa774-b888-43f1-9131-f7ed88d557e4 from image adt/ubuntu-plucky-s390x-server-20250203.img (UUID 247705cf-ad10-4dc6-8dfa-317dcfe4f398)... 1996s nova [W] Timed out waiting for dd33c9aa-9a9c-440c-9951-d8a5614fcb5f to get deleted.