0s autopkgtest [06:31:02]: starting date and time: 2024-11-02 06:31:02+0000 0s autopkgtest [06:31:02]: git checkout: 6f3be7a8 Fix armhf LXD image generation for plucky 0s autopkgtest [06:31:02]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.cg_7dc6w/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:r-cran-curl --apt-upgrade r-bioc-rcpi --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=r-cran-curl/5.2.3+dfsg-1 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-s390x-6.secgroup --name adt-plucky-s390x-r-bioc-rcpi-20241102-063102-juju-7f2275-prod-proposed-migration-environment-2-d1222c67-059c-4513-9aae-52bb7fecdef3 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 92s autopkgtest [06:32:34]: testbed dpkg architecture: s390x 93s autopkgtest [06:32:35]: testbed apt version: 2.9.8 93s autopkgtest [06:32:35]: @@@@@@@@@@@@@@@@@@@@ test bed setup 93s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [73.9 kB] 94s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [2584 kB] 94s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/restricted Sources [7016 B] 94s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [172 kB] 94s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [40.4 kB] 94s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [212 kB] 94s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [1833 kB] 95s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [33.3 kB] 95s Fetched 4955 kB in 2s (2750 kB/s) 95s Reading package lists... 97s Reading package lists... 98s Building dependency tree... 98s Reading state information... 98s Calculating upgrade... 98s The following packages will be upgraded: 98s libblockdev-crypto3 libblockdev-fs3 libblockdev-loop3 libblockdev-mdraid3 98s libblockdev-nvme3 libblockdev-part3 libblockdev-swap3 libblockdev-utils3 98s libblockdev3 libevdev2 libftdi1-2 libinih1 libpipeline1 nano 98s python3-lazr.uri 98s 15 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 98s Need to get 611 kB of archives. 98s After this operation, 52.2 kB of additional disk space will be used. 98s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libevdev2 s390x 1.13.3+dfsg-1 [35.9 kB] 98s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libpipeline1 s390x 1.5.8-1 [32.5 kB] 98s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x nano s390x 8.2-1 [298 kB] 98s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x libblockdev-utils3 s390x 3.2.0-2 [19.3 kB] 98s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x libblockdev-crypto3 s390x 3.2.0-2 [23.7 kB] 98s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x libblockdev-fs3 s390x 3.2.0-2 [36.1 kB] 98s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libblockdev-loop3 s390x 3.2.0-2 [7092 B] 98s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libblockdev-mdraid3 s390x 3.2.0-2 [12.8 kB] 98s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libblockdev-nvme3 s390x 3.2.0-2 [18.1 kB] 98s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libblockdev-part3 s390x 3.2.0-2 [15.3 kB] 98s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libblockdev-swap3 s390x 3.2.0-2 [7704 B] 98s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libblockdev3 s390x 3.2.0-2 [53.8 kB] 98s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x libftdi1-2 s390x 1.5-7 [29.2 kB] 98s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x libinih1 s390x 58-1ubuntu1 [7602 B] 98s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x python3-lazr.uri all 1.0.6-4 [13.6 kB] 99s Fetched 611 kB in 1s (1099 kB/s) 99s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55483 files and directories currently installed.) 99s Preparing to unpack .../00-libevdev2_1.13.3+dfsg-1_s390x.deb ... 99s Unpacking libevdev2:s390x (1.13.3+dfsg-1) over (1.13.2+dfsg-1) ... 99s Preparing to unpack .../01-libpipeline1_1.5.8-1_s390x.deb ... 99s Unpacking libpipeline1:s390x (1.5.8-1) over (1.5.7-2) ... 99s Preparing to unpack .../02-nano_8.2-1_s390x.deb ... 99s Unpacking nano (8.2-1) over (8.1-1) ... 99s Preparing to unpack .../03-libblockdev-utils3_3.2.0-2_s390x.deb ... 99s Unpacking libblockdev-utils3:s390x (3.2.0-2) over (3.1.1-2) ... 99s Preparing to unpack .../04-libblockdev-crypto3_3.2.0-2_s390x.deb ... 99s Unpacking libblockdev-crypto3:s390x (3.2.0-2) over (3.1.1-2) ... 99s Preparing to unpack .../05-libblockdev-fs3_3.2.0-2_s390x.deb ... 99s Unpacking libblockdev-fs3:s390x (3.2.0-2) over (3.1.1-2) ... 99s Preparing to unpack .../06-libblockdev-loop3_3.2.0-2_s390x.deb ... 99s Unpacking libblockdev-loop3:s390x (3.2.0-2) over (3.1.1-2) ... 99s Preparing to unpack .../07-libblockdev-mdraid3_3.2.0-2_s390x.deb ... 99s Unpacking libblockdev-mdraid3:s390x (3.2.0-2) over (3.1.1-2) ... 99s Preparing to unpack .../08-libblockdev-nvme3_3.2.0-2_s390x.deb ... 99s Unpacking libblockdev-nvme3:s390x (3.2.0-2) over (3.1.1-2) ... 99s Preparing to unpack .../09-libblockdev-part3_3.2.0-2_s390x.deb ... 99s Unpacking libblockdev-part3:s390x (3.2.0-2) over (3.1.1-2) ... 99s Preparing to unpack .../10-libblockdev-swap3_3.2.0-2_s390x.deb ... 99s Unpacking libblockdev-swap3:s390x (3.2.0-2) over (3.1.1-2) ... 99s Preparing to unpack .../11-libblockdev3_3.2.0-2_s390x.deb ... 99s Unpacking libblockdev3:s390x (3.2.0-2) over (3.1.1-2) ... 99s Preparing to unpack .../12-libftdi1-2_1.5-7_s390x.deb ... 99s Unpacking libftdi1-2:s390x (1.5-7) over (1.5-6build5) ... 99s Preparing to unpack .../13-libinih1_58-1ubuntu1_s390x.deb ... 99s Unpacking libinih1:s390x (58-1ubuntu1) over (55-1ubuntu2) ... 99s Preparing to unpack .../14-python3-lazr.uri_1.0.6-4_all.deb ... 99s Unpacking python3-lazr.uri (1.0.6-4) over (1.0.6-3) ... 99s Setting up libpipeline1:s390x (1.5.8-1) ... 99s Setting up libinih1:s390x (58-1ubuntu1) ... 99s Setting up python3-lazr.uri (1.0.6-4) ... 99s Setting up libftdi1-2:s390x (1.5-7) ... 99s Setting up libblockdev-utils3:s390x (3.2.0-2) ... 99s Setting up libblockdev-nvme3:s390x (3.2.0-2) ... 99s Setting up nano (8.2-1) ... 99s Setting up libblockdev-fs3:s390x (3.2.0-2) ... 99s Setting up libevdev2:s390x (1.13.3+dfsg-1) ... 99s Setting up libblockdev-mdraid3:s390x (3.2.0-2) ... 99s Setting up libblockdev-crypto3:s390x (3.2.0-2) ... 99s Setting up libblockdev-swap3:s390x (3.2.0-2) ... 99s Setting up libblockdev-loop3:s390x (3.2.0-2) ... 99s Setting up libblockdev3:s390x (3.2.0-2) ... 99s Installing new version of config file /etc/libblockdev/3/conf.d/00-default.cfg ... 99s Setting up libblockdev-part3:s390x (3.2.0-2) ... 99s Processing triggers for libc-bin (2.40-1ubuntu3) ... 99s Processing triggers for man-db (2.12.1-3) ... 100s Processing triggers for install-info (7.1.1-1) ... 100s Reading package lists... 100s Building dependency tree... 100s Reading state information... 100s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 100s Hit:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease 101s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 101s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 101s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 101s Reading package lists... 101s Reading package lists... 102s Building dependency tree... 102s Reading state information... 102s Calculating upgrade... 102s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 102s Reading package lists... 102s Building dependency tree... 102s Reading state information... 102s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 105s autopkgtest [06:32:47]: testbed running kernel: Linux 6.11.0-8-generic #8-Ubuntu SMP Mon Sep 16 12:49:35 UTC 2024 105s autopkgtest [06:32:47]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-rcpi 107s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-rcpi 1.40.2+ds-1 (dsc) [2212 B] 107s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-rcpi 1.40.2+ds-1 (tar) [1494 kB] 107s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-rcpi 1.40.2+ds-1 (diff) [6848 B] 107s gpgv: Signature made Sat Sep 7 12:10:31 2024 UTC 107s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 107s gpgv: Can't check signature: No public key 107s dpkg-source: warning: cannot verify inline signature for ./r-bioc-rcpi_1.40.2+ds-1.dsc: no acceptable signature found 107s autopkgtest [06:32:49]: testing package r-bioc-rcpi version 1.40.2+ds-1 107s autopkgtest [06:32:49]: build not needed 109s autopkgtest [06:32:51]: test pkg-r-autopkgtest: preparing testbed 110s Reading package lists... 110s Building dependency tree... 110s Reading state information... 110s Starting pkgProblemResolver with broken count: 0 110s Starting 2 pkgProblemResolver with broken count: 0 110s Done 110s The following additional packages will be installed: 110s build-essential cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu 110s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 110s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-14 110s g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14 gcc-14-s390x-linux-gnu 110s gcc-s390x-linux-gnu gfortran gfortran-14 gfortran-14-s390x-linux-gnu 110s gfortran-s390x-linux-gnu icu-devtools javascript-common libasan8 libblas-dev 110s libblas3 libbz2-dev libcairo2 libcc1-0 libdatrie1 libdeflate-dev libdeflate0 110s libfontconfig1 libfreetype6 libgcc-14-dev libgfortran-14-dev libgfortran5 110s libgomp1 libgraphite2-3 libharfbuzz0b libice6 libicu-dev libisl23 libitm1 110s libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 110s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 110s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 110s libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js 110s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 110s libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 liblua5.4-0 110s liblzma-dev libmpc3 libncurses-dev libpango-1.0-0 libpangocairo-1.0-0 110s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 110s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 110s libreadline-dev libsharpyuv0 libsm6 libstdc++-14-dev libtcl8.6 libthai-data 110s libthai0 libtiff6 libtirpc-dev libtk8.6 libubsan1 libwebp7 libxcb-render0 110s libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 littler 110s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 110s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 110s r-bioc-annotationdbi r-bioc-biobase r-bioc-biocgenerics r-bioc-biostrings 110s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-go.db r-bioc-gosemsim 110s r-bioc-iranges r-bioc-keggrest r-bioc-pwalign r-bioc-rcpi r-bioc-s4vectors 110s r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-askpass 110s r-cran-base64enc r-cran-bit r-cran-bit64 r-cran-blob r-cran-brio 110s r-cran-bslib r-cran-cachem r-cran-callr r-cran-cli r-cran-codetools 110s r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-dbi 110s r-cran-desc r-cran-diffobj r-cran-digest r-cran-doparallel r-cran-evaluate 110s r-cran-fansi r-cran-fastmap r-cran-fontawesome r-cran-foreach r-cran-fs 110s r-cran-glue r-cran-highr r-cran-htmltools r-cran-httpuv r-cran-httr 110s r-cran-httr2 r-cran-iterators r-cran-jquerylib r-cran-jsonlite r-cran-knitr 110s r-cran-later r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-memoise 110s r-cran-mime r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig 110s r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-png r-cran-praise 110s r-cran-processx r-cran-promises r-cran-ps r-cran-r.methodss3 r-cran-r.oo 110s r-cran-r.utils r-cran-r6 r-cran-rappdirs r-cran-rcpp r-cran-rematch2 110s r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rprojroot r-cran-rsqlite 110s r-cran-sass r-cran-shiny r-cran-sourcetools r-cran-sys r-cran-testthat 110s r-cran-tibble r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-waldo 110s r-cran-withr r-cran-xfun r-cran-xtable r-cran-yaml r-cran-yulab.utils unzip 110s x11-common xdg-utils zip zlib1g-dev 110s Suggested packages: 110s cpp-doc gcc-14-locales cpp-14-doc debtags gcc-14-doc gcc-multilib 110s manpages-dev autoconf automake libtool flex bison gdb gcc-doc 110s gdb-s390x-linux-gnu gfortran-doc gfortran-14-doc libcoarrays-dev apache2 110s | lighttpd | httpd liblapack-doc icu-doc libjs-jquery-ui-docs 110s fonts-mathjax-extras fonts-stix libjs-mathjax-doc liblzma-doc ncurses-doc 110s readline-doc libstdc++-14-doc tcl8.6 tk8.6 nodejs texlive-latex-recommended 110s texlive-xetex texlive-luatex pandoc-citeproc texlive-latex-extra context 110s wkhtmltopdf librsvg2-bin groff ghc php python ruby libjs-katex 110s citation-style-language-styles elpa-ess r-doc-info | r-doc-pdf r-mathlib 110s r-base-html texlive-base texlive-latex-base texlive-plain-generic 110s texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils texinfo 110s r-cran-runit r-bioc-org.hs.eg.db r-bioc-graph r-bioc-biocstyle r-bioc-all 110s r-bioc-limma r-bioc-genomicranges r-bioc-delayedarray r-bioc-rsamtools 110s r-bioc-affy r-bioc-deseq2 r-bioc-annotate r-bioc-bsgenome 110s r-bioc-genomicfeatures r-cran-data.table r-bioc-genomicalignments 110s r-bioc-annotationhub r-cran-biocmanager r-cran-readr r-cran-tidyr 110s r-cran-tidyselect r-cran-rocr r-cran-markdown r-bioc-summarizedexperiment 110s r-cran-matrix r-bioc-shortread r-cran-rmariadb r-cran-roxygen2 r-cran-ff 110s r-cran-covr r-cran-rstudioapi r-cran-rmysql r-cran-getopt r-cran-dplyr 110s r-cran-formattable r-cran-ggplot2 r-cran-nanotime r-cran-palmerpenguins 110s r-cran-scales r-cran-stringi r-cran-survival r-cran-units r-cran-vdiffr 110s r-cran-inline r-cran-spelling r-cran-bench r-cran-here r-cran-hms 110s r-cran-purrr r-cran-plm r-cran-zoo 110s Recommended packages: 110s bzip2-doc node-jquery libpng-tools r-recommended r-doc-html r-cran-covr 110s r-cran-future r-cran-ggplot2 r-cran-thematic r-cran-mockery r-cran-spelling 110s r-cran-htmlwidgets r-cran-rstudioapi r-cran-whoami r-cran-xml2 r-cran-bench 110s r-cran-decor r-cran-lobstr r-cran-progress r-cran-scales r-cran-webutils 110s r-cran-gh r-cran-runit r-cran-caret r-cran-mlbench r-cran-rpart 110s r-cran-lattice r-cran-unitizer r-cran-dplyr r-cran-rsvg r-cran-markdown 110s r-cran-testit r-cran-cairo r-cran-ragg r-cran-jpeg r-cran-readr r-cran-clipr 110s r-cran-docopt r-cran-webfakes r-cran-r.rsp r-cran-sf r-cran-formatr 110s r-cran-gridsvg r-cran-magick r-cran-reticulate r-cran-rgl r-cran-tikzdevice 110s r-cran-webshot r-cran-svglite node-highlight.js r-cran-lintr 110s r-cran-tidyverse r-cran-sodium r-cran-lubridate r-cran-bitops 110s r-cran-mathjaxr r-cran-remotes r-cran-usethis r-cran-purrr r-cran-pingr 110s r-cran-dygraphs r-cran-rsconnect r-cran-downlit r-cran-mockr r-cran-dbitest 110s r-cran-gert r-cran-hms r-cran-rvest r-cran-dt r-cran-data.table 110s r-cran-formattable r-cran-generics r-cran-pkgdown r-cran-zeallot r-cran-renv 110s libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils 110s x11-xserver-utils 110s The following NEW packages will be installed: 110s autopkgtest-satdep build-essential cpp cpp-14 cpp-14-s390x-linux-gnu 110s cpp-s390x-linux-gnu dctrl-tools fontconfig fontconfig-config 110s fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome 110s fonts-glyphicons-halflings fonts-mathjax g++ g++-14 g++-14-s390x-linux-gnu 110s g++-s390x-linux-gnu gcc gcc-14 gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu 110s gfortran gfortran-14 gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu 110s icu-devtools javascript-common libasan8 libblas-dev libblas3 libbz2-dev 110s libcairo2 libcc1-0 libdatrie1 libdeflate-dev libdeflate0 libfontconfig1 110s libfreetype6 libgcc-14-dev libgfortran-14-dev libgfortran5 libgomp1 110s libgraphite2-3 libharfbuzz0b libice6 libicu-dev libisl23 libitm1 libjbig0 110s libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev 110s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js 110s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js 110s libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js 110s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js 110s libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 liblua5.4-0 110s liblzma-dev libmpc3 libncurses-dev libpango-1.0-0 libpangocairo-1.0-0 110s libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0 110s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev 110s libreadline-dev libsharpyuv0 libsm6 libstdc++-14-dev libtcl8.6 libthai-data 110s libthai0 libtiff6 libtirpc-dev libtk8.6 libubsan1 libwebp7 libxcb-render0 110s libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 littler 110s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 110s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 110s r-bioc-annotationdbi r-bioc-biobase r-bioc-biocgenerics r-bioc-biostrings 110s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-go.db r-bioc-gosemsim 110s r-bioc-iranges r-bioc-keggrest r-bioc-pwalign r-bioc-rcpi r-bioc-s4vectors 110s r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-askpass 110s r-cran-base64enc r-cran-bit r-cran-bit64 r-cran-blob r-cran-brio 110s r-cran-bslib r-cran-cachem r-cran-callr r-cran-cli r-cran-codetools 110s r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-dbi 110s r-cran-desc r-cran-diffobj r-cran-digest r-cran-doparallel r-cran-evaluate 110s r-cran-fansi r-cran-fastmap r-cran-fontawesome r-cran-foreach r-cran-fs 110s r-cran-glue r-cran-highr r-cran-htmltools r-cran-httpuv r-cran-httr 110s r-cran-httr2 r-cran-iterators r-cran-jquerylib r-cran-jsonlite r-cran-knitr 110s r-cran-later r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-memoise 110s r-cran-mime r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig 110s r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-png r-cran-praise 110s r-cran-processx r-cran-promises r-cran-ps r-cran-r.methodss3 r-cran-r.oo 110s r-cran-r.utils r-cran-r6 r-cran-rappdirs r-cran-rcpp r-cran-rematch2 110s r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rprojroot r-cran-rsqlite 110s r-cran-sass r-cran-shiny r-cran-sourcetools r-cran-sys r-cran-testthat 110s r-cran-tibble r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-waldo 110s r-cran-withr r-cran-xfun r-cran-xtable r-cran-yaml r-cran-yulab.utils unzip 110s x11-common xdg-utils zip zlib1g-dev 110s 0 upgraded, 221 newly installed, 0 to remove and 0 not upgraded. 110s Need to get 288 MB/288 MB of archives. 110s After this operation, 1013 MB of additional disk space will be used. 110s Get:1 /tmp/autopkgtest.bOIJZO/1-autopkgtest-satdep.deb autopkgtest-satdep s390x 0 [760 B] 111s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libisl23 s390x 0.27-1 [704 kB] 111s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB] 111s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-7ubuntu1 [9570 kB] 111s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14 s390x 14.2.0-7ubuntu1 [1022 B] 111s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [5452 B] 111s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x cpp s390x 4:14.1.0-2ubuntu1 [22.4 kB] 111s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libcc1-0 s390x 14.2.0-7ubuntu1 [50.6 kB] 111s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 14.2.0-7ubuntu1 [151 kB] 111s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libitm1 s390x 14.2.0-7ubuntu1 [30.9 kB] 111s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libasan8 s390x 14.2.0-7ubuntu1 [2963 kB] 112s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libubsan1 s390x 14.2.0-7ubuntu1 [1184 kB] 112s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-14-dev s390x 14.2.0-7ubuntu1 [1037 kB] 112s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-7ubuntu1 [18.7 MB] 112s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14 s390x 14.2.0-7ubuntu1 [515 kB] 112s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [1204 B] 112s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x gcc s390x 4:14.1.0-2ubuntu1 [4996 B] 112s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++-14-dev s390x 14.2.0-7ubuntu1 [2607 kB] 112s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-7ubuntu1 [11.0 MB] 112s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14 s390x 14.2.0-7ubuntu1 [19.8 kB] 112s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x g++-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [956 B] 112s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x g++ s390x 4:14.1.0-2ubuntu1 [1076 B] 112s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x build-essential s390x 12.10ubuntu1 [4930 B] 112s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x dctrl-tools s390x 2.24-3build3 [106 kB] 112s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB] 112s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 112s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 113s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-1.1ubuntu2 [37.4 kB] 113s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-1.1ubuntu2 [150 kB] 113s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig s390x 2.15.0-1.1ubuntu2 [191 kB] 113s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 113s Get:32 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 113s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 113s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 14.2.0-7ubuntu1 [587 kB] 113s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran-14-dev s390x 14.2.0-7ubuntu1 [654 kB] 113s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14-s390x-linux-gnu s390x 14.2.0-7ubuntu1 [10.3 MB] 113s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14 s390x 14.2.0-7ubuntu1 [11.6 kB] 113s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-s390x-linux-gnu s390x 4:14.1.0-2ubuntu1 [1016 B] 113s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran s390x 4:14.1.0-2ubuntu1 [1160 B] 113s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x icu-devtools s390x 74.2-1ubuntu4 [222 kB] 113s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x javascript-common all 11+nmu1 [5936 B] 113s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.0-3build2 [238 kB] 113s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x libblas-dev s390x 3.12.0-3build2 [239 kB] 113s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x libbz2-dev s390x 1.0.8-6 [39.1 kB] 113s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.42.2-1build1 [206 kB] 113s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB] 113s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B] 113s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB] 113s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB] 113s Get:50 http://ftpmaster.internal/ubuntu plucky/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB] 113s Get:51 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.21-1 [46.1 kB] 113s Get:52 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate-dev s390x 1.21-1 [52.2 kB] 113s Get:53 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB] 113s Get:54 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 9.0.0-1 [533 kB] 113s Get:55 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB] 113s Get:56 http://ftpmaster.internal/ubuntu plucky/main s390x libice6 s390x 2:1.0.10-1build3 [44.8 kB] 113s Get:57 http://ftpmaster.internal/ubuntu plucky/main s390x libicu-dev s390x 74.2-1ubuntu4 [11.9 MB] 113s Get:58 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-2ubuntu2 [150 kB] 113s Get:59 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8-dev s390x 2.1.5-2ubuntu2 [284 kB] 113s Get:60 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 113s Get:61 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B] 113s Get:62 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B] 113s Get:63 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 113s Get:64 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 113s Get:65 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 114s Get:66 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-d3 all 3.5.17-4 [132 kB] 114s Get:67 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-es5-shim all 4.6.7-2 [39.8 kB] 114s Get:68 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 114s Get:69 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 114s Get:70 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 114s Get:71 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 114s Get:72 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 114s Get:73 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 114s Get:74 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 114s Get:75 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 114s Get:76 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 114s Get:77 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.0-3build2 [2953 kB] 114s Get:78 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack-dev s390x 3.12.0-3build2 [5956 kB] 114s Get:79 http://ftpmaster.internal/ubuntu plucky/main s390x liblua5.4-0 s390x 5.4.6-3build2 [179 kB] 114s Get:80 http://ftpmaster.internal/ubuntu plucky/main s390x libncurses-dev s390x 6.5-2 [404 kB] 114s Get:81 http://ftpmaster.internal/ubuntu plucky/main s390x libthai-data all 0.1.29-2build1 [158 kB] 114s Get:82 http://ftpmaster.internal/ubuntu plucky/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB] 114s Get:83 http://ftpmaster.internal/ubuntu plucky/main s390x libpango-1.0-0 s390x 1.54.0+ds-2 [247 kB] 114s Get:84 http://ftpmaster.internal/ubuntu plucky/main s390x libpangoft2-1.0-0 s390x 1.54.0+ds-2 [49.3 kB] 114s Get:85 http://ftpmaster.internal/ubuntu plucky/main s390x libpangocairo-1.0-0 s390x 1.54.0+ds-2 [28.0 kB] 114s Get:86 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper1 s390x 1.1.29build1 [13.4 kB] 114s Get:87 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper-utils s390x 1.1.29build1 [8442 B] 114s Get:88 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-16-0 s390x 10.42-4ubuntu3 [236 kB] 114s Get:89 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-32-0 s390x 10.42-4ubuntu3 [221 kB] 114s Get:90 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-posix3 s390x 10.42-4ubuntu3 [6820 B] 114s Get:91 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-dev s390x 10.42-4ubuntu3 [815 kB] 114s Get:92 http://ftpmaster.internal/ubuntu plucky/main s390x libpkgconf3 s390x 1.8.1-3ubuntu1 [31.2 kB] 114s Get:93 http://ftpmaster.internal/ubuntu plucky/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB] 114s Get:94 http://ftpmaster.internal/ubuntu plucky/main s390x libpng-dev s390x 1.6.44-1 [276 kB] 114s Get:95 http://ftpmaster.internal/ubuntu plucky/main s390x libreadline-dev s390x 8.2-5 [187 kB] 114s Get:96 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.4.0-0.1 [16.2 kB] 114s Get:97 http://ftpmaster.internal/ubuntu plucky/main s390x libsm6 s390x 2:1.2.3-1build3 [17.7 kB] 114s Get:98 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.14+dfsg-1build1 [1038 kB] 114s Get:99 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB] 114s Get:100 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.4.0-0.1 [204 kB] 114s Get:101 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB] 114s Get:102 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB] 114s Get:103 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B] 114s Get:104 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.14-1build1 [833 kB] 115s Get:105 http://ftpmaster.internal/ubuntu plucky/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB] 115s Get:106 http://ftpmaster.internal/ubuntu plucky/main s390x zip s390x 3.0-14 [187 kB] 115s Get:107 http://ftpmaster.internal/ubuntu plucky/main s390x unzip s390x 6.0-28ubuntu6 [186 kB] 115s Get:108 http://ftpmaster.internal/ubuntu plucky/main s390x xdg-utils all 1.2.1-0ubuntu1 [67.5 kB] 115s Get:109 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-core s390x 4.4.1-1 [28.6 MB] 116s Get:110 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-littler s390x 0.3.20-1 [94.9 kB] 116s Get:111 http://ftpmaster.internal/ubuntu plucky/universe s390x littler all 0.3.20-1 [2486 B] 116s Get:112 http://ftpmaster.internal/ubuntu plucky/universe s390x node-bootstrap-sass all 3.4.3-2 [187 kB] 116s Get:113 http://ftpmaster.internal/ubuntu plucky/universe s390x node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 116s Get:114 http://ftpmaster.internal/ubuntu plucky/universe s390x node-normalize.css all 8.0.1-5 [10.8 kB] 116s Get:115 http://ftpmaster.internal/ubuntu plucky/universe s390x pandoc-data all 3.1.11.1-3 [78.7 kB] 116s Get:116 http://ftpmaster.internal/ubuntu plucky/universe s390x pandoc s390x 3.1.11.1+ds-2 [52.5 MB] 118s Get:117 http://ftpmaster.internal/ubuntu plucky/main s390x liblzma-dev s390x 5.6.2-2 [183 kB] 118s Get:118 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf-bin s390x 1.8.1-3ubuntu1 [21.4 kB] 118s Get:119 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf s390x 1.8.1-3ubuntu1 [16.8 kB] 118s Get:120 http://ftpmaster.internal/ubuntu plucky/main s390x libtirpc-dev s390x 1.3.4+ds-1.3 [196 kB] 118s Get:121 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-dev all 4.4.1-1 [4338 B] 118s Get:122 http://ftpmaster.internal/ubuntu plucky/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 118s Get:123 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocgenerics all 0.50.0-2 [605 kB] 118s Get:124 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biobase s390x 2.64.0-4 [2154 kB] 118s Get:125 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-s4vectors s390x 0.42.1+dfsg-2 [1897 kB] 119s Get:126 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-iranges s390x 2.38.1-1 [2301 kB] 119s Get:127 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-dbi all 1.2.3-1 [853 kB] 119s Get:128 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bit s390x 4.0.5-1 [1067 kB] 119s Get:129 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bit64 s390x 4.0.5-1 [469 kB] 119s Get:130 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rlang s390x 1.1.4-1 [1715 kB] 119s Get:131 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cli s390x 3.6.2-1 [1382 kB] 119s Get:132 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-glue s390x 1.7.0-1 [154 kB] 119s Get:133 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 119s Get:134 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB] 119s Get:135 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-blob all 1.2.4-1 [49.8 kB] 119s Get:136 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fastmap s390x 1.1.1-1 [69.1 kB] 119s Get:137 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cachem s390x 1.0.8-1 [72.1 kB] 119s Get:138 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-memoise all 2.0.1-1 [53.9 kB] 119s Get:139 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 119s Get:140 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-plogr all 0.2.0-3build1 [15.1 kB] 119s Get:141 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cpp11 all 0.4.7-1 [266 kB] 119s Get:142 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rsqlite s390x 2.3.7-2 [1298 kB] 119s Get:143 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x r-cran-curl s390x 5.2.3+dfsg-1 [180 kB] 119s Get:144 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-jsonlite s390x 1.8.8+dfsg-1 [444 kB] 119s Get:145 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mime s390x 0.12-2 [35.8 kB] 119s Get:146 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sys s390x 3.4.2-1 [44.5 kB] 119s Get:147 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-askpass s390x 1.2.0-1 [24.5 kB] 119s Get:148 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-openssl s390x 2.2.0+dfsg-1 [405 kB] 119s Get:149 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r6 all 2.5.1-1 [99.0 kB] 119s Get:150 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-httr all 1.4.7+dfsg-1 [459 kB] 119s Get:151 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-png s390x 0.1-8-1build2 [41.5 kB] 119s Get:152 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-zlibbioc all 1.50.0+dfsg-2 [10.1 kB] 119s Get:153 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-xvector s390x 0.44.0-1 [625 kB] 119s Get:154 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-ucsc.utils all 1.0.0+ds-2 [77.0 kB] 119s Get:155 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-genomeinfodbdata all 1.2.12-1 [12.6 MB] 120s Get:156 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-genomeinfodb all 1.40.1+dfsg-1 [3883 kB] 120s Get:157 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-crayon all 1.5.2-1 [164 kB] 120s Get:158 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biostrings s390x 2.72.1+dfsg-1 [13.2 MB] 120s Get:159 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-keggrest all 1.44.1+dfsg-1 [188 kB] 120s Get:160 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-annotationdbi all 1.66.0-1 [4848 kB] 121s Get:161 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-go.db all 3.19.1-1 [17.7 MB] 121s Get:162 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-digest s390x 0.6.36-1 [204 kB] 121s Get:163 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB] 121s Get:164 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rappdirs s390x 0.3.3-1 [47.5 kB] 121s Get:165 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-withr all 3.0.0+dfsg-1 [228 kB] 121s Get:166 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-httr2 all 1.0.2-1 [571 kB] 121s Get:167 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r.methodss3 all 1.8.2-1 [84.0 kB] 121s Get:168 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r.oo all 1.26.0-1 [955 kB] 122s Get:169 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r.utils all 2.12.3-1 [1386 kB] 122s Get:170 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fs s390x 1.6.4+dfsg-1 [245 kB] 122s Get:171 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-yulab.utils all 0.1.4-1 [79.3 kB] 122s Get:172 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 122s Get:173 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcpp s390x 1.0.13-1 [1993 kB] 122s Get:174 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-gosemsim s390x 2.30.2-1 [1102 kB] 122s Get:175 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-pwalign s390x 1.0.0-2 [750 kB] 122s Get:176 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-codetools all 0.2-20-1 [90.5 kB] 122s Get:177 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-iterators all 1.0.14-1 [336 kB] 122s Get:178 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-foreach all 1.5.2-1 [124 kB] 122s Get:179 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-doparallel all 1.0.17-1 [189 kB] 122s Get:180 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rjson s390x 0.2.21-1 [142 kB] 122s Get:181 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-rcpi all 1.40.2+ds-1 [1162 kB] 122s Get:182 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-base64enc s390x 0.1-3-3 [28.0 kB] 122s Get:183 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-brio s390x 1.1.5-1 [38.6 kB] 122s Get:184 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-htmltools s390x 0.5.8.1-1 [372 kB] 122s Get:185 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 122s Get:186 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sass s390x 0.4.9+dfsg-1 [1019 kB] 122s Get:187 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bslib all 0.7.0+dfsg-1 [4255 kB] 122s Get:188 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ps s390x 1.7.6-1 [313 kB] 122s Get:189 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-processx s390x 3.8.4-1 [353 kB] 122s Get:190 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-callr all 3.7.6-1 [458 kB] 122s Get:191 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-commonmark s390x 1.9.1-1 [142 kB] 122s Get:192 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-desc all 1.4.3-1 [359 kB] 122s Get:193 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-diffobj s390x 0.3.5-1 [1115 kB] 122s Get:194 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-evaluate all 0.24.0-1 [93.5 kB] 122s Get:195 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fansi s390x 1.0.5-1 [615 kB] 122s Get:196 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fontawesome all 0.5.2-1 [1300 kB] 122s Get:197 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-xfun s390x 0.45+dfsg-1 [517 kB] 122s Get:198 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-highr all 0.11+dfsg-1 [38.5 kB] 122s Get:199 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-later s390x 1.3.2+dfsg-1 [126 kB] 122s Get:200 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-promises s390x 1.3.0+dfsg-1 [288 kB] 122s Get:201 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-httpuv s390x 1.6.15+dfsg-1 [507 kB] 123s Get:202 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-yaml s390x 2.3.8-2 [112 kB] 123s Get:203 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 123s Get:204 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-knitr all 1.47+dfsg-1 [911 kB] 123s Get:205 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB] 123s Get:206 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pillar all 1.9.0+dfsg-1 [464 kB] 123s Get:207 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgbuild all 1.4.4-1 [212 kB] 123s Get:208 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rprojroot all 2.0.4-1 [124 kB] 123s Get:209 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgload all 1.4.0-1 [247 kB] 123s Get:210 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-praise all 1.0.0-4build1 [20.3 kB] 123s Get:211 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tibble s390x 3.2.1+dfsg-2 [415 kB] 123s Get:212 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rematch2 all 2.1.2-2build1 [46.5 kB] 123s Get:213 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tinytex all 0.51-1 [145 kB] 123s Get:214 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-modernizr all 3.13.0-0.1 [101 kB] 123s Get:215 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-xtable all 1:1.8-4-2 [689 kB] 123s Get:216 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sourcetools s390x 0.1.7-1-1 [47.1 kB] 123s Get:217 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 124s Get:218 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-shiny all 1.8.1.1+dfsg-1 [2873 kB] 124s Get:219 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rmarkdown all 2.27+dfsg-1 [1501 kB] 124s Get:220 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-waldo all 0.5.2-1build1 [120 kB] 124s Get:221 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-testthat s390x 3.2.1.1-1 [1638 kB] 124s Preconfiguring packages ... 124s Fetched 288 MB in 13s (21.7 MB/s) 124s Selecting previously unselected package libisl23:s390x. 124s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 55483 files and directories currently installed.) 124s Preparing to unpack .../000-libisl23_0.27-1_s390x.deb ... 124s Unpacking libisl23:s390x (0.27-1) ... 124s Selecting previously unselected package libmpc3:s390x. 124s Preparing to unpack .../001-libmpc3_1.3.1-1build2_s390x.deb ... 124s Unpacking libmpc3:s390x (1.3.1-1build2) ... 124s Selecting previously unselected package cpp-14-s390x-linux-gnu. 124s Preparing to unpack .../002-cpp-14-s390x-linux-gnu_14.2.0-7ubuntu1_s390x.deb ... 124s Unpacking cpp-14-s390x-linux-gnu (14.2.0-7ubuntu1) ... 125s Selecting previously unselected package cpp-14. 125s Preparing to unpack .../003-cpp-14_14.2.0-7ubuntu1_s390x.deb ... 125s Unpacking cpp-14 (14.2.0-7ubuntu1) ... 125s Selecting previously unselected package cpp-s390x-linux-gnu. 125s Preparing to unpack .../004-cpp-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ... 125s Unpacking cpp-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 125s Selecting previously unselected package cpp. 125s Preparing to unpack .../005-cpp_4%3a14.1.0-2ubuntu1_s390x.deb ... 125s Unpacking cpp (4:14.1.0-2ubuntu1) ... 125s Selecting previously unselected package libcc1-0:s390x. 125s Preparing to unpack .../006-libcc1-0_14.2.0-7ubuntu1_s390x.deb ... 125s Unpacking libcc1-0:s390x (14.2.0-7ubuntu1) ... 125s Selecting previously unselected package libgomp1:s390x. 125s Preparing to unpack .../007-libgomp1_14.2.0-7ubuntu1_s390x.deb ... 125s Unpacking libgomp1:s390x (14.2.0-7ubuntu1) ... 125s Selecting previously unselected package libitm1:s390x. 125s Preparing to unpack .../008-libitm1_14.2.0-7ubuntu1_s390x.deb ... 125s Unpacking libitm1:s390x (14.2.0-7ubuntu1) ... 125s Selecting previously unselected package libasan8:s390x. 125s Preparing to unpack .../009-libasan8_14.2.0-7ubuntu1_s390x.deb ... 125s Unpacking libasan8:s390x (14.2.0-7ubuntu1) ... 125s Selecting previously unselected package libubsan1:s390x. 125s Preparing to unpack .../010-libubsan1_14.2.0-7ubuntu1_s390x.deb ... 125s Unpacking libubsan1:s390x (14.2.0-7ubuntu1) ... 125s Selecting previously unselected package libgcc-14-dev:s390x. 125s Preparing to unpack .../011-libgcc-14-dev_14.2.0-7ubuntu1_s390x.deb ... 125s Unpacking libgcc-14-dev:s390x (14.2.0-7ubuntu1) ... 125s Selecting previously unselected package gcc-14-s390x-linux-gnu. 125s Preparing to unpack .../012-gcc-14-s390x-linux-gnu_14.2.0-7ubuntu1_s390x.deb ... 125s Unpacking gcc-14-s390x-linux-gnu (14.2.0-7ubuntu1) ... 125s Selecting previously unselected package gcc-14. 125s Preparing to unpack .../013-gcc-14_14.2.0-7ubuntu1_s390x.deb ... 125s Unpacking gcc-14 (14.2.0-7ubuntu1) ... 125s Selecting previously unselected package gcc-s390x-linux-gnu. 125s Preparing to unpack .../014-gcc-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ... 125s Unpacking gcc-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 125s Selecting previously unselected package gcc. 125s Preparing to unpack .../015-gcc_4%3a14.1.0-2ubuntu1_s390x.deb ... 125s Unpacking gcc (4:14.1.0-2ubuntu1) ... 125s Selecting previously unselected package libstdc++-14-dev:s390x. 125s Preparing to unpack .../016-libstdc++-14-dev_14.2.0-7ubuntu1_s390x.deb ... 125s Unpacking libstdc++-14-dev:s390x (14.2.0-7ubuntu1) ... 125s Selecting previously unselected package g++-14-s390x-linux-gnu. 125s Preparing to unpack .../017-g++-14-s390x-linux-gnu_14.2.0-7ubuntu1_s390x.deb ... 125s Unpacking g++-14-s390x-linux-gnu (14.2.0-7ubuntu1) ... 125s Selecting previously unselected package g++-14. 125s Preparing to unpack .../018-g++-14_14.2.0-7ubuntu1_s390x.deb ... 125s Unpacking g++-14 (14.2.0-7ubuntu1) ... 125s Selecting previously unselected package g++-s390x-linux-gnu. 125s Preparing to unpack .../019-g++-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ... 125s Unpacking g++-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 125s Selecting previously unselected package g++. 125s Preparing to unpack .../020-g++_4%3a14.1.0-2ubuntu1_s390x.deb ... 125s Unpacking g++ (4:14.1.0-2ubuntu1) ... 125s Selecting previously unselected package build-essential. 125s Preparing to unpack .../021-build-essential_12.10ubuntu1_s390x.deb ... 125s Unpacking build-essential (12.10ubuntu1) ... 125s Selecting previously unselected package dctrl-tools. 125s Preparing to unpack .../022-dctrl-tools_2.24-3build3_s390x.deb ... 125s Unpacking dctrl-tools (2.24-3build3) ... 125s Selecting previously unselected package libfreetype6:s390x. 125s Preparing to unpack .../023-libfreetype6_2.13.3+dfsg-1_s390x.deb ... 125s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ... 125s Selecting previously unselected package fonts-dejavu-mono. 125s Preparing to unpack .../024-fonts-dejavu-mono_2.37-8_all.deb ... 125s Unpacking fonts-dejavu-mono (2.37-8) ... 126s Selecting previously unselected package fonts-dejavu-core. 126s Preparing to unpack .../025-fonts-dejavu-core_2.37-8_all.deb ... 126s Unpacking fonts-dejavu-core (2.37-8) ... 126s Selecting previously unselected package fontconfig-config. 126s Preparing to unpack .../026-fontconfig-config_2.15.0-1.1ubuntu2_s390x.deb ... 126s Unpacking fontconfig-config (2.15.0-1.1ubuntu2) ... 126s Selecting previously unselected package libfontconfig1:s390x. 126s Preparing to unpack .../027-libfontconfig1_2.15.0-1.1ubuntu2_s390x.deb ... 126s Unpacking libfontconfig1:s390x (2.15.0-1.1ubuntu2) ... 126s Selecting previously unselected package fontconfig. 126s Preparing to unpack .../028-fontconfig_2.15.0-1.1ubuntu2_s390x.deb ... 126s Unpacking fontconfig (2.15.0-1.1ubuntu2) ... 126s Selecting previously unselected package fonts-font-awesome. 126s Preparing to unpack .../029-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 126s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 126s Selecting previously unselected package fonts-glyphicons-halflings. 126s Preparing to unpack .../030-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 126s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 126s Selecting previously unselected package fonts-mathjax. 126s Preparing to unpack .../031-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 126s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 126s Selecting previously unselected package libgfortran5:s390x. 126s Preparing to unpack .../032-libgfortran5_14.2.0-7ubuntu1_s390x.deb ... 126s Unpacking libgfortran5:s390x (14.2.0-7ubuntu1) ... 126s Selecting previously unselected package libgfortran-14-dev:s390x. 126s Preparing to unpack .../033-libgfortran-14-dev_14.2.0-7ubuntu1_s390x.deb ... 126s Unpacking libgfortran-14-dev:s390x (14.2.0-7ubuntu1) ... 126s Selecting previously unselected package gfortran-14-s390x-linux-gnu. 126s Preparing to unpack .../034-gfortran-14-s390x-linux-gnu_14.2.0-7ubuntu1_s390x.deb ... 126s Unpacking gfortran-14-s390x-linux-gnu (14.2.0-7ubuntu1) ... 126s Selecting previously unselected package gfortran-14. 126s Preparing to unpack .../035-gfortran-14_14.2.0-7ubuntu1_s390x.deb ... 126s Unpacking gfortran-14 (14.2.0-7ubuntu1) ... 126s Selecting previously unselected package gfortran-s390x-linux-gnu. 126s Preparing to unpack .../036-gfortran-s390x-linux-gnu_4%3a14.1.0-2ubuntu1_s390x.deb ... 126s Unpacking gfortran-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 126s Selecting previously unselected package gfortran. 126s Preparing to unpack .../037-gfortran_4%3a14.1.0-2ubuntu1_s390x.deb ... 126s Unpacking gfortran (4:14.1.0-2ubuntu1) ... 126s Selecting previously unselected package icu-devtools. 126s Preparing to unpack .../038-icu-devtools_74.2-1ubuntu4_s390x.deb ... 126s Unpacking icu-devtools (74.2-1ubuntu4) ... 126s Selecting previously unselected package javascript-common. 126s Preparing to unpack .../039-javascript-common_11+nmu1_all.deb ... 126s Unpacking javascript-common (11+nmu1) ... 126s Selecting previously unselected package libblas3:s390x. 126s Preparing to unpack .../040-libblas3_3.12.0-3build2_s390x.deb ... 126s Unpacking libblas3:s390x (3.12.0-3build2) ... 126s Selecting previously unselected package libblas-dev:s390x. 126s Preparing to unpack .../041-libblas-dev_3.12.0-3build2_s390x.deb ... 126s Unpacking libblas-dev:s390x (3.12.0-3build2) ... 126s Selecting previously unselected package libbz2-dev:s390x. 126s Preparing to unpack .../042-libbz2-dev_1.0.8-6_s390x.deb ... 126s Unpacking libbz2-dev:s390x (1.0.8-6) ... 126s Selecting previously unselected package libpixman-1-0:s390x. 126s Preparing to unpack .../043-libpixman-1-0_0.42.2-1build1_s390x.deb ... 126s Unpacking libpixman-1-0:s390x (0.42.2-1build1) ... 126s Selecting previously unselected package libxcb-render0:s390x. 126s Preparing to unpack .../044-libxcb-render0_1.17.0-2_s390x.deb ... 126s Unpacking libxcb-render0:s390x (1.17.0-2) ... 126s Selecting previously unselected package libxcb-shm0:s390x. 126s Preparing to unpack .../045-libxcb-shm0_1.17.0-2_s390x.deb ... 126s Unpacking libxcb-shm0:s390x (1.17.0-2) ... 126s Selecting previously unselected package libxrender1:s390x. 126s Preparing to unpack .../046-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ... 126s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ... 126s Selecting previously unselected package libcairo2:s390x. 126s Preparing to unpack .../047-libcairo2_1.18.2-2_s390x.deb ... 126s Unpacking libcairo2:s390x (1.18.2-2) ... 126s Selecting previously unselected package libdatrie1:s390x. 126s Preparing to unpack .../048-libdatrie1_0.2.13-3build1_s390x.deb ... 126s Unpacking libdatrie1:s390x (0.2.13-3build1) ... 126s Selecting previously unselected package libdeflate0:s390x. 126s Preparing to unpack .../049-libdeflate0_1.21-1_s390x.deb ... 126s Unpacking libdeflate0:s390x (1.21-1) ... 126s Selecting previously unselected package libdeflate-dev:s390x. 126s Preparing to unpack .../050-libdeflate-dev_1.21-1_s390x.deb ... 126s Unpacking libdeflate-dev:s390x (1.21-1) ... 126s Selecting previously unselected package libgraphite2-3:s390x. 126s Preparing to unpack .../051-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ... 126s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 126s Selecting previously unselected package libharfbuzz0b:s390x. 126s Preparing to unpack .../052-libharfbuzz0b_9.0.0-1_s390x.deb ... 126s Unpacking libharfbuzz0b:s390x (9.0.0-1) ... 126s Selecting previously unselected package x11-common. 126s Preparing to unpack .../053-x11-common_1%3a7.7+23ubuntu3_all.deb ... 126s Unpacking x11-common (1:7.7+23ubuntu3) ... 126s Selecting previously unselected package libice6:s390x. 126s Preparing to unpack .../054-libice6_2%3a1.0.10-1build3_s390x.deb ... 126s Unpacking libice6:s390x (2:1.0.10-1build3) ... 126s Selecting previously unselected package libicu-dev:s390x. 126s Preparing to unpack .../055-libicu-dev_74.2-1ubuntu4_s390x.deb ... 126s Unpacking libicu-dev:s390x (74.2-1ubuntu4) ... 127s Selecting previously unselected package libjpeg-turbo8:s390x. 127s Preparing to unpack .../056-libjpeg-turbo8_2.1.5-2ubuntu2_s390x.deb ... 127s Unpacking libjpeg-turbo8:s390x (2.1.5-2ubuntu2) ... 127s Selecting previously unselected package libjpeg-turbo8-dev:s390x. 127s Preparing to unpack .../057-libjpeg-turbo8-dev_2.1.5-2ubuntu2_s390x.deb ... 127s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu2) ... 127s Selecting previously unselected package libjpeg8:s390x. 127s Preparing to unpack .../058-libjpeg8_8c-2ubuntu11_s390x.deb ... 127s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 127s Selecting previously unselected package libjpeg8-dev:s390x. 127s Preparing to unpack .../059-libjpeg8-dev_8c-2ubuntu11_s390x.deb ... 127s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ... 127s Selecting previously unselected package libjpeg-dev:s390x. 127s Preparing to unpack .../060-libjpeg-dev_8c-2ubuntu11_s390x.deb ... 127s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ... 127s Selecting previously unselected package libjs-bootstrap. 127s Preparing to unpack .../061-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 127s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 127s Selecting previously unselected package libjs-popper.js. 127s Preparing to unpack .../062-libjs-popper.js_1.16.1+ds-6_all.deb ... 127s Unpacking libjs-popper.js (1.16.1+ds-6) ... 127s Selecting previously unselected package libjs-bootstrap4. 127s Preparing to unpack .../063-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 127s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 127s Selecting previously unselected package libjs-d3. 127s Preparing to unpack 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Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 127s Selecting previously unselected package libjs-microplugin.js. 127s Preparing to unpack .../070-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 127s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 127s Selecting previously unselected package libjs-jquery-selectize.js. 127s Preparing to unpack .../071-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 127s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 127s Selecting previously unselected package libjs-jquery-ui. 127s Preparing to unpack .../072-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 127s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 127s Selecting previously unselected package libjs-json. 127s Preparing to unpack .../073-libjs-json_0~20221030+~1.0.8-1_all.deb ... 127s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 127s Selecting previously unselected package libjs-prettify. 127s Preparing to unpack .../074-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 127s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 127s Selecting previously unselected package liblapack3:s390x. 127s Preparing to unpack .../075-liblapack3_3.12.0-3build2_s390x.deb ... 127s Unpacking liblapack3:s390x (3.12.0-3build2) ... 127s Selecting previously unselected package liblapack-dev:s390x. 127s Preparing to unpack .../076-liblapack-dev_3.12.0-3build2_s390x.deb ... 127s Unpacking liblapack-dev:s390x (3.12.0-3build2) ... 127s Selecting previously unselected package liblua5.4-0:s390x. 127s Preparing to unpack .../077-liblua5.4-0_5.4.6-3build2_s390x.deb ... 127s Unpacking liblua5.4-0:s390x (5.4.6-3build2) ... 127s Selecting previously unselected package libncurses-dev:s390x. 127s Preparing to unpack .../078-libncurses-dev_6.5-2_s390x.deb ... 127s Unpacking libncurses-dev:s390x (6.5-2) ... 127s Selecting previously unselected package libthai-data. 127s Preparing to unpack .../079-libthai-data_0.1.29-2build1_all.deb ... 127s Unpacking libthai-data (0.1.29-2build1) ... 127s Selecting previously unselected package libthai0:s390x. 127s Preparing to unpack .../080-libthai0_0.1.29-2build1_s390x.deb ... 127s Unpacking libthai0:s390x (0.1.29-2build1) ... 127s Selecting previously unselected package libpango-1.0-0:s390x. 127s Preparing to unpack .../081-libpango-1.0-0_1.54.0+ds-2_s390x.deb ... 127s Unpacking libpango-1.0-0:s390x (1.54.0+ds-2) ... 127s Selecting previously unselected package libpangoft2-1.0-0:s390x. 127s Preparing to unpack .../082-libpangoft2-1.0-0_1.54.0+ds-2_s390x.deb ... 127s Unpacking libpangoft2-1.0-0:s390x (1.54.0+ds-2) ... 127s Selecting previously unselected package libpangocairo-1.0-0:s390x. 127s Preparing to unpack .../083-libpangocairo-1.0-0_1.54.0+ds-2_s390x.deb ... 127s Unpacking libpangocairo-1.0-0:s390x (1.54.0+ds-2) ... 127s Selecting previously unselected package libpaper1:s390x. 127s Preparing to unpack .../084-libpaper1_1.1.29build1_s390x.deb ... 127s Unpacking libpaper1:s390x (1.1.29build1) ... 127s Selecting previously unselected package libpaper-utils. 127s Preparing to unpack .../085-libpaper-utils_1.1.29build1_s390x.deb ... 127s Unpacking libpaper-utils (1.1.29build1) ... 127s Selecting previously unselected package libpcre2-16-0:s390x. 127s Preparing to unpack .../086-libpcre2-16-0_10.42-4ubuntu3_s390x.deb ... 127s Unpacking libpcre2-16-0:s390x (10.42-4ubuntu3) ... 127s Selecting previously unselected package libpcre2-32-0:s390x. 127s Preparing to unpack .../087-libpcre2-32-0_10.42-4ubuntu3_s390x.deb ... 127s Unpacking libpcre2-32-0:s390x (10.42-4ubuntu3) ... 127s Selecting previously unselected package libpcre2-posix3:s390x. 127s Preparing to unpack .../088-libpcre2-posix3_10.42-4ubuntu3_s390x.deb ... 127s Unpacking libpcre2-posix3:s390x (10.42-4ubuntu3) ... 127s Selecting previously unselected package libpcre2-dev:s390x. 127s Preparing to unpack .../089-libpcre2-dev_10.42-4ubuntu3_s390x.deb ... 127s Unpacking libpcre2-dev:s390x (10.42-4ubuntu3) ... 127s Selecting previously unselected package libpkgconf3:s390x. 127s Preparing to unpack .../090-libpkgconf3_1.8.1-3ubuntu1_s390x.deb ... 127s Unpacking libpkgconf3:s390x (1.8.1-3ubuntu1) ... 127s Selecting previously unselected package zlib1g-dev:s390x. 127s Preparing to unpack .../091-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_s390x.deb ... 127s Unpacking zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 127s Selecting previously unselected package libpng-dev:s390x. 127s Preparing to unpack .../092-libpng-dev_1.6.44-1_s390x.deb ... 127s Unpacking libpng-dev:s390x (1.6.44-1) ... 127s Selecting previously unselected package libreadline-dev:s390x. 127s Preparing to unpack .../093-libreadline-dev_8.2-5_s390x.deb ... 127s Unpacking libreadline-dev:s390x (8.2-5) ... 127s Selecting previously unselected package libsharpyuv0:s390x. 127s Preparing to unpack .../094-libsharpyuv0_1.4.0-0.1_s390x.deb ... 127s Unpacking libsharpyuv0:s390x (1.4.0-0.1) ... 127s Selecting previously unselected package libsm6:s390x. 127s Preparing to unpack .../095-libsm6_2%3a1.2.3-1build3_s390x.deb ... 127s Unpacking libsm6:s390x (2:1.2.3-1build3) ... 127s Selecting previously unselected package libtcl8.6:s390x. 127s Preparing to unpack .../096-libtcl8.6_8.6.14+dfsg-1build1_s390x.deb ... 127s Unpacking libtcl8.6:s390x (8.6.14+dfsg-1build1) ... 127s Selecting previously unselected package libjbig0:s390x. 127s Preparing to unpack .../097-libjbig0_2.1-6.1ubuntu2_s390x.deb ... 127s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ... 127s Selecting previously unselected package libwebp7:s390x. 127s Preparing to unpack .../098-libwebp7_1.4.0-0.1_s390x.deb ... 127s Unpacking libwebp7:s390x (1.4.0-0.1) ... 127s Selecting previously unselected package libtiff6:s390x. 127s Preparing to unpack .../099-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ... 127s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 127s Selecting previously unselected package libxft2:s390x. 127s Preparing to unpack .../100-libxft2_2.3.6-1build1_s390x.deb ... 127s Unpacking libxft2:s390x (2.3.6-1build1) ... 127s Selecting previously unselected package libxss1:s390x. 127s Preparing to unpack .../101-libxss1_1%3a1.2.3-1build3_s390x.deb ... 127s Unpacking libxss1:s390x (1:1.2.3-1build3) ... 127s Selecting previously unselected package libtk8.6:s390x. 127s Preparing to unpack .../102-libtk8.6_8.6.14-1build1_s390x.deb ... 127s Unpacking libtk8.6:s390x (8.6.14-1build1) ... 127s Selecting previously unselected package libxt6t64:s390x. 127s Preparing to unpack .../103-libxt6t64_1%3a1.2.1-1.2build1_s390x.deb ... 127s Unpacking libxt6t64:s390x (1:1.2.1-1.2build1) ... 127s Selecting previously unselected package zip. 127s Preparing to unpack .../104-zip_3.0-14_s390x.deb ... 127s Unpacking zip (3.0-14) ... 127s Selecting previously unselected package unzip. 127s Preparing to unpack .../105-unzip_6.0-28ubuntu6_s390x.deb ... 127s Unpacking unzip (6.0-28ubuntu6) ... 127s Selecting previously unselected package xdg-utils. 127s Preparing to unpack .../106-xdg-utils_1.2.1-0ubuntu1_all.deb ... 127s Unpacking xdg-utils (1.2.1-0ubuntu1) ... 128s Selecting previously unselected package r-base-core. 128s Preparing to unpack .../107-r-base-core_4.4.1-1_s390x.deb ... 128s Unpacking r-base-core (4.4.1-1) ... 128s Selecting previously unselected package r-cran-littler. 128s Preparing to unpack .../108-r-cran-littler_0.3.20-1_s390x.deb ... 128s Unpacking r-cran-littler (0.3.20-1) ... 128s Selecting previously unselected package littler. 128s Preparing to unpack .../109-littler_0.3.20-1_all.deb ... 128s Unpacking littler (0.3.20-1) ... 128s Selecting previously unselected package node-bootstrap-sass. 128s Preparing to unpack .../110-node-bootstrap-sass_3.4.3-2_all.deb ... 128s Unpacking node-bootstrap-sass (3.4.3-2) ... 128s Selecting previously unselected package node-html5shiv. 128s Preparing to unpack .../111-node-html5shiv_3.7.3+dfsg-5_all.deb ... 128s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 128s Selecting previously unselected package node-normalize.css. 128s Preparing to unpack .../112-node-normalize.css_8.0.1-5_all.deb ... 128s Unpacking node-normalize.css (8.0.1-5) ... 128s Selecting previously unselected package pandoc-data. 128s Preparing to unpack .../113-pandoc-data_3.1.11.1-3_all.deb ... 128s Unpacking pandoc-data (3.1.11.1-3) ... 128s Selecting previously unselected package pandoc. 128s Preparing to unpack .../114-pandoc_3.1.11.1+ds-2_s390x.deb ... 128s Unpacking pandoc (3.1.11.1+ds-2) ... 129s Selecting previously unselected package liblzma-dev:s390x. 129s Preparing to unpack .../115-liblzma-dev_5.6.2-2_s390x.deb ... 129s Unpacking liblzma-dev:s390x (5.6.2-2) ... 129s Selecting previously unselected package pkgconf-bin. 129s Preparing to unpack .../116-pkgconf-bin_1.8.1-3ubuntu1_s390x.deb ... 129s Unpacking pkgconf-bin (1.8.1-3ubuntu1) ... 129s Selecting previously unselected package pkgconf:s390x. 129s Preparing to unpack .../117-pkgconf_1.8.1-3ubuntu1_s390x.deb ... 129s Unpacking pkgconf:s390x (1.8.1-3ubuntu1) ... 129s Selecting previously unselected package libtirpc-dev:s390x. 129s Preparing to unpack .../118-libtirpc-dev_1.3.4+ds-1.3_s390x.deb ... 129s Unpacking libtirpc-dev:s390x (1.3.4+ds-1.3) ... 129s Selecting previously unselected package r-base-dev. 129s Preparing to unpack .../119-r-base-dev_4.4.1-1_all.deb ... 129s Unpacking r-base-dev (4.4.1-1) ... 129s Selecting previously unselected package pkg-r-autopkgtest. 129s Preparing to unpack .../120-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 129s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 129s Selecting previously unselected package r-bioc-biocgenerics. 129s Preparing to unpack .../121-r-bioc-biocgenerics_0.50.0-2_all.deb ... 129s Unpacking r-bioc-biocgenerics (0.50.0-2) ... 129s Selecting previously unselected package r-bioc-biobase. 129s Preparing to unpack .../122-r-bioc-biobase_2.64.0-4_s390x.deb ... 129s Unpacking r-bioc-biobase (2.64.0-4) ... 129s Selecting previously unselected package r-bioc-s4vectors. 129s Preparing to unpack .../123-r-bioc-s4vectors_0.42.1+dfsg-2_s390x.deb ... 129s Unpacking r-bioc-s4vectors (0.42.1+dfsg-2) ... 129s Selecting previously unselected package r-bioc-iranges. 129s Preparing to unpack .../124-r-bioc-iranges_2.38.1-1_s390x.deb ... 129s Unpacking r-bioc-iranges (2.38.1-1) ... 129s Selecting previously unselected package r-cran-dbi. 129s Preparing to unpack .../125-r-cran-dbi_1.2.3-1_all.deb ... 129s Unpacking r-cran-dbi (1.2.3-1) ... 129s Selecting previously unselected package r-cran-bit. 129s Preparing to unpack .../126-r-cran-bit_4.0.5-1_s390x.deb ... 129s Unpacking r-cran-bit (4.0.5-1) ... 129s Selecting previously unselected package r-cran-bit64. 129s Preparing to unpack .../127-r-cran-bit64_4.0.5-1_s390x.deb ... 129s Unpacking r-cran-bit64 (4.0.5-1) ... 129s Selecting previously unselected package r-cran-rlang. 129s Preparing to unpack .../128-r-cran-rlang_1.1.4-1_s390x.deb ... 129s Unpacking r-cran-rlang (1.1.4-1) ... 129s Selecting previously unselected package r-cran-cli. 129s Preparing to unpack .../129-r-cran-cli_3.6.2-1_s390x.deb ... 129s Unpacking r-cran-cli (3.6.2-1) ... 130s Selecting previously unselected package r-cran-glue. 130s Preparing to unpack .../130-r-cran-glue_1.7.0-1_s390x.deb ... 130s Unpacking r-cran-glue (1.7.0-1) ... 130s Selecting previously unselected package r-cran-lifecycle. 130s Preparing to unpack .../131-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 130s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 130s Selecting previously unselected package r-cran-vctrs. 130s Preparing to unpack .../132-r-cran-vctrs_0.6.5-1_s390x.deb ... 130s Unpacking r-cran-vctrs (0.6.5-1) ... 130s Selecting previously unselected package r-cran-blob. 130s Preparing to unpack .../133-r-cran-blob_1.2.4-1_all.deb ... 130s Unpacking r-cran-blob (1.2.4-1) ... 130s Selecting previously unselected package r-cran-fastmap. 130s Preparing to unpack .../134-r-cran-fastmap_1.1.1-1_s390x.deb ... 130s Unpacking r-cran-fastmap (1.1.1-1) ... 130s Selecting previously unselected package r-cran-cachem. 130s Preparing to unpack .../135-r-cran-cachem_1.0.8-1_s390x.deb ... 130s Unpacking r-cran-cachem (1.0.8-1) ... 130s Selecting previously unselected package r-cran-memoise. 130s Preparing to unpack .../136-r-cran-memoise_2.0.1-1_all.deb ... 130s Unpacking r-cran-memoise (2.0.1-1) ... 130s Selecting previously unselected package r-cran-pkgconfig. 130s Preparing to unpack .../137-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 130s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 130s Selecting previously unselected package r-cran-plogr. 130s Preparing to unpack .../138-r-cran-plogr_0.2.0-3build1_all.deb ... 130s Unpacking r-cran-plogr (0.2.0-3build1) ... 130s Selecting previously unselected package r-cran-cpp11. 130s Preparing to unpack .../139-r-cran-cpp11_0.4.7-1_all.deb ... 130s Unpacking r-cran-cpp11 (0.4.7-1) ... 130s Selecting previously unselected package r-cran-rsqlite. 130s Preparing to unpack .../140-r-cran-rsqlite_2.3.7-2_s390x.deb ... 130s Unpacking r-cran-rsqlite (2.3.7-2) ... 130s Selecting previously unselected package r-cran-curl. 130s Preparing to unpack .../141-r-cran-curl_5.2.3+dfsg-1_s390x.deb ... 130s Unpacking r-cran-curl (5.2.3+dfsg-1) ... 130s Selecting previously unselected package r-cran-jsonlite. 130s Preparing to unpack .../142-r-cran-jsonlite_1.8.8+dfsg-1_s390x.deb ... 130s Unpacking r-cran-jsonlite (1.8.8+dfsg-1) ... 130s Selecting previously unselected package r-cran-mime. 130s Preparing to unpack .../143-r-cran-mime_0.12-2_s390x.deb ... 130s Unpacking r-cran-mime (0.12-2) ... 130s Selecting previously unselected package r-cran-sys. 130s Preparing to unpack .../144-r-cran-sys_3.4.2-1_s390x.deb ... 130s Unpacking r-cran-sys (3.4.2-1) ... 130s Selecting previously unselected package r-cran-askpass. 130s Preparing to unpack .../145-r-cran-askpass_1.2.0-1_s390x.deb ... 130s Unpacking r-cran-askpass (1.2.0-1) ... 130s Selecting previously unselected package r-cran-openssl. 130s Preparing to unpack .../146-r-cran-openssl_2.2.0+dfsg-1_s390x.deb ... 130s Unpacking r-cran-openssl (2.2.0+dfsg-1) ... 130s Selecting previously unselected package r-cran-r6. 130s Preparing to unpack .../147-r-cran-r6_2.5.1-1_all.deb ... 130s Unpacking r-cran-r6 (2.5.1-1) ... 130s Selecting previously unselected package r-cran-httr. 130s Preparing to unpack .../148-r-cran-httr_1.4.7+dfsg-1_all.deb ... 130s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 130s Selecting previously unselected package r-cran-png. 130s Preparing to unpack .../149-r-cran-png_0.1-8-1build2_s390x.deb ... 130s Unpacking r-cran-png (0.1-8-1build2) ... 130s Selecting previously unselected package r-bioc-zlibbioc. 130s Preparing to unpack .../150-r-bioc-zlibbioc_1.50.0+dfsg-2_all.deb ... 130s Unpacking r-bioc-zlibbioc (1.50.0+dfsg-2) ... 130s Selecting previously unselected package r-bioc-xvector. 130s Preparing to unpack .../151-r-bioc-xvector_0.44.0-1_s390x.deb ... 130s Unpacking r-bioc-xvector (0.44.0-1) ... 130s Selecting previously unselected package r-bioc-ucsc.utils. 130s Preparing to unpack .../152-r-bioc-ucsc.utils_1.0.0+ds-2_all.deb ... 130s Unpacking r-bioc-ucsc.utils (1.0.0+ds-2) ... 130s Selecting previously unselected package r-bioc-genomeinfodbdata. 130s Preparing to unpack .../153-r-bioc-genomeinfodbdata_1.2.12-1_all.deb ... 130s Unpacking r-bioc-genomeinfodbdata (1.2.12-1) ... 130s Selecting previously unselected package r-bioc-genomeinfodb. 130s Preparing to unpack .../154-r-bioc-genomeinfodb_1.40.1+dfsg-1_all.deb ... 130s Unpacking r-bioc-genomeinfodb (1.40.1+dfsg-1) ... 130s Selecting previously unselected package r-cran-crayon. 130s Preparing to unpack .../155-r-cran-crayon_1.5.2-1_all.deb ... 130s Unpacking r-cran-crayon (1.5.2-1) ... 130s Selecting previously unselected package r-bioc-biostrings. 130s Preparing to unpack .../156-r-bioc-biostrings_2.72.1+dfsg-1_s390x.deb ... 130s Unpacking r-bioc-biostrings (2.72.1+dfsg-1) ... 130s Selecting previously unselected package r-bioc-keggrest. 130s Preparing to unpack .../157-r-bioc-keggrest_1.44.1+dfsg-1_all.deb ... 130s Unpacking r-bioc-keggrest (1.44.1+dfsg-1) ... 130s Selecting previously unselected package r-bioc-annotationdbi. 130s Preparing to unpack .../158-r-bioc-annotationdbi_1.66.0-1_all.deb ... 130s Unpacking r-bioc-annotationdbi (1.66.0-1) ... 130s Selecting previously unselected package r-bioc-go.db. 130s Preparing to unpack .../159-r-bioc-go.db_3.19.1-1_all.deb ... 130s Unpacking r-bioc-go.db (3.19.1-1) ... 130s Selecting previously unselected package r-cran-digest. 130s Preparing to unpack .../160-r-cran-digest_0.6.36-1_s390x.deb ... 130s Unpacking r-cran-digest (0.6.36-1) ... 131s Selecting previously unselected package r-cran-magrittr. 131s Preparing to unpack .../161-r-cran-magrittr_2.0.3-1_s390x.deb ... 131s Unpacking r-cran-magrittr (2.0.3-1) ... 131s Selecting previously unselected package r-cran-rappdirs. 131s Preparing to unpack .../162-r-cran-rappdirs_0.3.3-1_s390x.deb ... 131s Unpacking r-cran-rappdirs (0.3.3-1) ... 131s Selecting previously unselected package r-cran-withr. 131s Preparing to unpack .../163-r-cran-withr_3.0.0+dfsg-1_all.deb ... 131s Unpacking r-cran-withr (3.0.0+dfsg-1) ... 131s Selecting previously unselected package r-cran-httr2. 131s Preparing to unpack .../164-r-cran-httr2_1.0.2-1_all.deb ... 131s Unpacking r-cran-httr2 (1.0.2-1) ... 131s Selecting previously unselected package r-cran-r.methodss3. 131s Preparing to unpack .../165-r-cran-r.methodss3_1.8.2-1_all.deb ... 131s Unpacking r-cran-r.methodss3 (1.8.2-1) ... 131s Selecting previously unselected package r-cran-r.oo. 131s Preparing to unpack .../166-r-cran-r.oo_1.26.0-1_all.deb ... 131s Unpacking r-cran-r.oo (1.26.0-1) ... 131s Selecting previously unselected package r-cran-r.utils. 131s Preparing to unpack .../167-r-cran-r.utils_2.12.3-1_all.deb ... 131s Unpacking r-cran-r.utils (2.12.3-1) ... 131s Selecting previously unselected package r-cran-fs. 131s Preparing to unpack .../168-r-cran-fs_1.6.4+dfsg-1_s390x.deb ... 131s Unpacking r-cran-fs (1.6.4+dfsg-1) ... 131s Selecting previously unselected package r-cran-yulab.utils. 131s Preparing to unpack .../169-r-cran-yulab.utils_0.1.4-1_all.deb ... 131s Unpacking r-cran-yulab.utils (0.1.4-1) ... 131s Selecting previously unselected package r-cran-pkgkitten. 131s Preparing to unpack .../170-r-cran-pkgkitten_0.2.4-1_all.deb ... 131s Unpacking r-cran-pkgkitten (0.2.4-1) ... 131s Selecting previously unselected package r-cran-rcpp. 131s Preparing to unpack .../171-r-cran-rcpp_1.0.13-1_s390x.deb ... 131s Unpacking r-cran-rcpp (1.0.13-1) ... 131s Selecting previously unselected package r-bioc-gosemsim. 131s Preparing to unpack .../172-r-bioc-gosemsim_2.30.2-1_s390x.deb ... 131s Unpacking r-bioc-gosemsim (2.30.2-1) ... 131s Selecting previously unselected package r-bioc-pwalign. 131s Preparing to unpack .../173-r-bioc-pwalign_1.0.0-2_s390x.deb ... 131s Unpacking r-bioc-pwalign (1.0.0-2) ... 131s Selecting previously unselected package r-cran-codetools. 131s Preparing to unpack .../174-r-cran-codetools_0.2-20-1_all.deb ... 131s Unpacking r-cran-codetools (0.2-20-1) ... 131s Selecting previously unselected package r-cran-iterators. 131s Preparing to unpack .../175-r-cran-iterators_1.0.14-1_all.deb ... 131s Unpacking r-cran-iterators (1.0.14-1) ... 131s Selecting previously unselected package r-cran-foreach. 131s Preparing to unpack .../176-r-cran-foreach_1.5.2-1_all.deb ... 131s Unpacking r-cran-foreach (1.5.2-1) ... 131s Selecting previously unselected package r-cran-doparallel. 131s Preparing to unpack .../177-r-cran-doparallel_1.0.17-1_all.deb ... 131s Unpacking r-cran-doparallel (1.0.17-1) ... 131s Selecting previously unselected package r-cran-rjson. 131s Preparing to unpack .../178-r-cran-rjson_0.2.21-1_s390x.deb ... 131s Unpacking r-cran-rjson (0.2.21-1) ... 131s Selecting previously unselected package r-bioc-rcpi. 131s Preparing to unpack .../179-r-bioc-rcpi_1.40.2+ds-1_all.deb ... 131s Unpacking r-bioc-rcpi (1.40.2+ds-1) ... 131s Selecting previously unselected package r-cran-base64enc. 131s Preparing to unpack .../180-r-cran-base64enc_0.1-3-3_s390x.deb ... 131s Unpacking r-cran-base64enc (0.1-3-3) ... 131s Selecting previously unselected package r-cran-brio. 131s Preparing to unpack .../181-r-cran-brio_1.1.5-1_s390x.deb ... 131s Unpacking r-cran-brio (1.1.5-1) ... 131s Selecting previously unselected package r-cran-htmltools. 131s Preparing to unpack .../182-r-cran-htmltools_0.5.8.1-1_s390x.deb ... 131s Unpacking r-cran-htmltools (0.5.8.1-1) ... 131s Selecting previously unselected package r-cran-jquerylib. 131s Preparing to unpack .../183-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 131s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 131s Selecting previously unselected package r-cran-sass. 131s Preparing to unpack .../184-r-cran-sass_0.4.9+dfsg-1_s390x.deb ... 131s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 131s Selecting previously unselected package r-cran-bslib. 131s Preparing to unpack .../185-r-cran-bslib_0.7.0+dfsg-1_all.deb ... 131s Unpacking r-cran-bslib (0.7.0+dfsg-1) ... 131s Selecting previously unselected package r-cran-ps. 131s Preparing to unpack .../186-r-cran-ps_1.7.6-1_s390x.deb ... 131s Unpacking r-cran-ps (1.7.6-1) ... 131s Selecting previously unselected package r-cran-processx. 131s Preparing to unpack .../187-r-cran-processx_3.8.4-1_s390x.deb ... 131s Unpacking r-cran-processx (3.8.4-1) ... 131s Selecting previously unselected package r-cran-callr. 131s Preparing to unpack .../188-r-cran-callr_3.7.6-1_all.deb ... 131s Unpacking r-cran-callr (3.7.6-1) ... 131s Selecting previously unselected package r-cran-commonmark. 131s Preparing to unpack .../189-r-cran-commonmark_1.9.1-1_s390x.deb ... 131s Unpacking r-cran-commonmark (1.9.1-1) ... 131s Selecting previously unselected package r-cran-desc. 131s Preparing to unpack .../190-r-cran-desc_1.4.3-1_all.deb ... 131s Unpacking r-cran-desc (1.4.3-1) ... 131s Selecting previously unselected package r-cran-diffobj. 131s Preparing to unpack .../191-r-cran-diffobj_0.3.5-1_s390x.deb ... 131s Unpacking r-cran-diffobj (0.3.5-1) ... 131s Selecting previously unselected package r-cran-evaluate. 131s Preparing to unpack .../192-r-cran-evaluate_0.24.0-1_all.deb ... 131s Unpacking r-cran-evaluate (0.24.0-1) ... 131s Selecting previously unselected package r-cran-fansi. 131s Preparing to unpack .../193-r-cran-fansi_1.0.5-1_s390x.deb ... 131s Unpacking r-cran-fansi (1.0.5-1) ... 131s Selecting previously unselected package r-cran-fontawesome. 131s Preparing to unpack .../194-r-cran-fontawesome_0.5.2-1_all.deb ... 131s Unpacking r-cran-fontawesome (0.5.2-1) ... 131s Selecting previously unselected package r-cran-xfun. 131s Preparing to unpack .../195-r-cran-xfun_0.45+dfsg-1_s390x.deb ... 131s Unpacking r-cran-xfun (0.45+dfsg-1) ... 131s Selecting previously unselected package r-cran-highr. 131s Preparing to unpack .../196-r-cran-highr_0.11+dfsg-1_all.deb ... 131s Unpacking r-cran-highr (0.11+dfsg-1) ... 131s Selecting previously unselected package r-cran-later. 131s Preparing to unpack .../197-r-cran-later_1.3.2+dfsg-1_s390x.deb ... 131s Unpacking r-cran-later (1.3.2+dfsg-1) ... 131s Selecting previously unselected package r-cran-promises. 131s Preparing to unpack .../198-r-cran-promises_1.3.0+dfsg-1_s390x.deb ... 131s Unpacking r-cran-promises (1.3.0+dfsg-1) ... 131s Selecting previously unselected package r-cran-httpuv. 131s Preparing to unpack .../199-r-cran-httpuv_1.6.15+dfsg-1_s390x.deb ... 131s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 131s Selecting previously unselected package r-cran-yaml. 131s Preparing to unpack .../200-r-cran-yaml_2.3.8-2_s390x.deb ... 131s Unpacking r-cran-yaml (2.3.8-2) ... 131s Selecting previously unselected package libjs-mathjax. 131s Preparing to unpack .../201-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 131s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 132s Selecting previously unselected package r-cran-knitr. 132s Preparing to unpack .../202-r-cran-knitr_1.47+dfsg-1_all.deb ... 132s Unpacking r-cran-knitr (1.47+dfsg-1) ... 132s Selecting previously unselected package r-cran-utf8. 132s Preparing to unpack .../203-r-cran-utf8_1.2.4-1_s390x.deb ... 132s Unpacking r-cran-utf8 (1.2.4-1) ... 132s Selecting previously unselected package r-cran-pillar. 132s Preparing to unpack .../204-r-cran-pillar_1.9.0+dfsg-1_all.deb ... 132s Unpacking r-cran-pillar (1.9.0+dfsg-1) ... 132s Selecting previously unselected package r-cran-pkgbuild. 132s Preparing to unpack .../205-r-cran-pkgbuild_1.4.4-1_all.deb ... 132s Unpacking r-cran-pkgbuild (1.4.4-1) ... 132s Selecting previously unselected package r-cran-rprojroot. 132s Preparing to unpack .../206-r-cran-rprojroot_2.0.4-1_all.deb ... 132s Unpacking r-cran-rprojroot (2.0.4-1) ... 132s Selecting previously unselected package r-cran-pkgload. 132s Preparing to unpack .../207-r-cran-pkgload_1.4.0-1_all.deb ... 132s Unpacking r-cran-pkgload (1.4.0-1) ... 132s Selecting previously unselected package r-cran-praise. 132s Preparing to unpack .../208-r-cran-praise_1.0.0-4build1_all.deb ... 132s Unpacking r-cran-praise (1.0.0-4build1) ... 132s Selecting previously unselected package r-cran-tibble. 132s Preparing to unpack .../209-r-cran-tibble_3.2.1+dfsg-2_s390x.deb ... 132s Unpacking r-cran-tibble (3.2.1+dfsg-2) ... 132s Selecting previously unselected package r-cran-rematch2. 132s Preparing to unpack .../210-r-cran-rematch2_2.1.2-2build1_all.deb ... 132s Unpacking r-cran-rematch2 (2.1.2-2build1) ... 132s Selecting previously unselected package r-cran-tinytex. 132s Preparing to unpack .../211-r-cran-tinytex_0.51-1_all.deb ... 132s Unpacking r-cran-tinytex (0.51-1) ... 132s Selecting previously unselected package libjs-modernizr. 132s Preparing to unpack .../212-libjs-modernizr_3.13.0-0.1_all.deb ... 132s Unpacking libjs-modernizr (3.13.0-0.1) ... 132s Selecting previously unselected package r-cran-xtable. 132s Preparing to unpack .../213-r-cran-xtable_1%3a1.8-4-2_all.deb ... 132s Unpacking r-cran-xtable (1:1.8-4-2) ... 132s Selecting previously unselected package r-cran-sourcetools. 132s Preparing to unpack .../214-r-cran-sourcetools_0.1.7-1-1_s390x.deb ... 132s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 132s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 132s Preparing to unpack .../215-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 132s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 132s Selecting previously unselected package r-cran-shiny. 132s Preparing to unpack .../216-r-cran-shiny_1.8.1.1+dfsg-1_all.deb ... 132s Unpacking r-cran-shiny (1.8.1.1+dfsg-1) ... 132s Selecting previously unselected package r-cran-rmarkdown. 132s Preparing to unpack .../217-r-cran-rmarkdown_2.27+dfsg-1_all.deb ... 132s Unpacking r-cran-rmarkdown (2.27+dfsg-1) ... 132s Selecting previously unselected package r-cran-waldo. 132s Preparing to unpack .../218-r-cran-waldo_0.5.2-1build1_all.deb ... 132s Unpacking r-cran-waldo (0.5.2-1build1) ... 132s Selecting previously unselected package r-cran-testthat. 132s Preparing to unpack .../219-r-cran-testthat_3.2.1.1-1_s390x.deb ... 132s Unpacking r-cran-testthat (3.2.1.1-1) ... 132s Selecting previously unselected package autopkgtest-satdep. 132s Preparing to unpack .../220-1-autopkgtest-satdep.deb ... 132s Unpacking autopkgtest-satdep (0) ... 132s Setting up libjs-json (0~20221030+~1.0.8-1) ... 132s Setting up javascript-common (11+nmu1) ... 132s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 132s Setting up libpixman-1-0:s390x (0.42.2-1build1) ... 132s Setting up libsharpyuv0:s390x (1.4.0-0.1) ... 132s Setting up libpaper1:s390x (1.1.29build1) ... 132s 132s Creating config file /etc/papersize with new version 132s Setting up libncurses-dev:s390x (6.5-2) ... 132s Setting up fonts-mathjax (2.7.9+dfsg-1) ... 132s Setting up libjs-mathjax (2.7.9+dfsg-1) ... 132s Setting up libxrender1:s390x (1:0.9.10-1.1build1) ... 132s Setting up libdatrie1:s390x (0.2.13-3build1) ... 132s Setting up libjs-popper.js (1.16.1+ds-6) ... 132s Setting up libxcb-render0:s390x (1.17.0-2) ... 132s Setting up libjs-sifter.js (0.6.0+dfsg-3) ... 132s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 132s Setting up unzip (6.0-28ubuntu6) ... 132s Setting up x11-common (1:7.7+23ubuntu3) ... 133s Setting up node-html5shiv (3.7.3+dfsg-5) ... 133s Setting up libdeflate0:s390x (1.21-1) ... 133s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... 133s Setting up libxcb-shm0:s390x (1.17.0-2) ... 133s Setting up libpaper-utils (1.1.29build1) ... 133s Setting up libreadline-dev:s390x (8.2-5) ... 133s Setting up libgomp1:s390x (14.2.0-7ubuntu1) ... 133s Setting up libjs-modernizr (3.13.0-0.1) ... 133s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ... 133s Setting up libpcre2-16-0:s390x (10.42-4ubuntu3) ... 133s Setting up libjs-es5-shim (4.6.7-2) ... 133s Setting up zip (3.0-14) ... 133s Setting up libpcre2-32-0:s390x (10.42-4ubuntu3) ... 133s Setting up libblas3:s390x (3.12.0-3build2) ... 133s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 133s Setting up libtirpc-dev:s390x (1.3.4+ds-1.3) ... 133s Setting up libpkgconf3:s390x (1.8.1-3ubuntu1) ... 133s Setting up libfreetype6:s390x (2.13.3+dfsg-1) ... 133s Setting up libjs-d3 (3.5.17-4) ... 133s Setting up fonts-dejavu-mono (2.37-8) ... 133s Setting up libmpc3:s390x (1.3.1-1build2) ... 133s Setting up libtcl8.6:s390x (8.6.14+dfsg-1build1) ... 133s Setting up icu-devtools (74.2-1ubuntu4) ... 133s Setting up fonts-dejavu-core (2.37-8) ... 133s Setting up pkgconf-bin (1.8.1-3ubuntu1) ... 133s Setting up libjpeg-turbo8:s390x (2.1.5-2ubuntu2) ... 133s Setting up libgfortran5:s390x (14.2.0-7ubuntu1) ... 133s Setting up libwebp7:s390x (1.4.0-0.1) ... 133s Setting up liblzma-dev:s390x (5.6.2-2) ... 133s Setting up libubsan1:s390x (14.2.0-7ubuntu1) ... 133s Setting up zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 133s Setting up libpcre2-posix3:s390x (10.42-4ubuntu3) ... 133s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... 133s Setting up libasan8:s390x (14.2.0-7ubuntu1) ... 133s Setting up liblua5.4-0:s390x (5.4.6-3build2) ... 133s Setting up libharfbuzz0b:s390x (9.0.0-1) ... 133s Setting up libthai-data (0.1.29-2build1) ... 133s Setting up node-bootstrap-sass (3.4.3-2) ... 133s Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... 133s Setting up libxss1:s390x (1:1.2.3-1build3) ... 133s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... 133s Setting up pandoc-data (3.1.11.1-3) ... 133s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 133s Setting up libisl23:s390x (0.27-1) ... 133s Setting up libdeflate-dev:s390x (1.21-1) ... 133s Setting up node-normalize.css (8.0.1-5) ... 133s Setting up libicu-dev:s390x (74.2-1ubuntu4) ... 133s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 133s Setting up xdg-utils (1.2.1-0ubuntu1) ... 133s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 133s Setting up libcc1-0:s390x (14.2.0-7ubuntu1) ... 133s Setting up libblas-dev:s390x (3.12.0-3build2) ... 133s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so to provide /usr/lib/s390x-linux-gnu/libblas.so (libblas.so-s390x-linux-gnu) in auto mode 133s Setting up dctrl-tools (2.24-3build3) ... 133s Setting up libjs-bootstrap (3.4.1+dfsg-3) ... 133s Setting up libitm1:s390x (14.2.0-7ubuntu1) ... 133s Setting up libbz2-dev:s390x (1.0.8-6) ... 133s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 133s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 133s Setting up libice6:s390x (2:1.0.10-1build3) ... 133s Setting up libjpeg-turbo8-dev:s390x (2.1.5-2ubuntu2) ... 133s Setting up liblapack3:s390x (3.12.0-3build2) ... 133s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 133s Setting up libpcre2-dev:s390x (10.42-4ubuntu3) ... 133s Setting up fontconfig-config (2.15.0-1.1ubuntu2) ... 133s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 133s Setting up libpng-dev:s390x (1.6.44-1) ... 133s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... 133s Setting up pkgconf:s390x (1.8.1-3ubuntu1) ... 133s Setting up libthai0:s390x (0.1.29-2build1) ... 133s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... 133s Setting up pandoc (3.1.11.1+ds-2) ... 133s Setting up liblapack-dev:s390x (3.12.0-3build2) ... 133s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode 133s Setting up cpp-14-s390x-linux-gnu (14.2.0-7ubuntu1) ... 133s Setting up cpp-14 (14.2.0-7ubuntu1) ... 133s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 133s Setting up libfontconfig1:s390x (2.15.0-1.1ubuntu2) ... 133s Setting up libgcc-14-dev:s390x (14.2.0-7ubuntu1) ... 133s Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ... 133s Setting up libstdc++-14-dev:s390x (14.2.0-7ubuntu1) ... 133s Setting up libsm6:s390x (2:1.2.3-1build3) ... 133s Setting up libgfortran-14-dev:s390x (14.2.0-7ubuntu1) ... 133s Setting up fontconfig (2.15.0-1.1ubuntu2) ... 135s Regenerating fonts cache... done. 135s Setting up libxft2:s390x (2.3.6-1build1) ... 135s Setting up cpp-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 135s Setting up libtk8.6:s390x (8.6.14-1build1) ... 135s Setting up libpango-1.0-0:s390x (1.54.0+ds-2) ... 135s Setting up libjpeg-dev:s390x (8c-2ubuntu11) ... 135s Setting up libcairo2:s390x (1.18.2-2) ... 135s Setting up gcc-14-s390x-linux-gnu (14.2.0-7ubuntu1) ... 135s Setting up gcc-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 135s Setting up libxt6t64:s390x (1:1.2.1-1.2build1) ... 135s Setting up g++-14-s390x-linux-gnu (14.2.0-7ubuntu1) ... 135s Setting up cpp (4:14.1.0-2ubuntu1) ... 135s Setting up libpangoft2-1.0-0:s390x (1.54.0+ds-2) ... 135s Setting up libpangocairo-1.0-0:s390x (1.54.0+ds-2) ... 135s Setting up gfortran-14-s390x-linux-gnu (14.2.0-7ubuntu1) ... 135s Setting up g++-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 135s Setting up gcc-14 (14.2.0-7ubuntu1) ... 135s Setting up r-base-core (4.4.1-1) ... 135s 135s Creating config file /etc/R/Renviron with new version 135s Setting up r-cran-crayon (1.5.2-1) ... 135s Setting up r-cran-sourcetools (0.1.7-1-1) ... 135s Setting up r-cran-ps (1.7.6-1) ... 135s Setting up r-cran-commonmark (1.9.1-1) ... 135s Setting up g++-14 (14.2.0-7ubuntu1) ... 135s Setting up r-cran-r6 (2.5.1-1) ... 135s Setting up r-cran-pkgkitten (0.2.4-1) ... 135s Setting up gfortran-14 (14.2.0-7ubuntu1) ... 135s Setting up r-cran-magrittr (2.0.3-1) ... 135s Setting up r-cran-rappdirs (0.3.3-1) ... 135s Setting up r-bioc-genomeinfodbdata (1.2.12-1) ... 135s Setting up r-cran-littler (0.3.20-1) ... 135s Setting up r-cran-fs (1.6.4+dfsg-1) ... 135s Setting up r-cran-rcpp (1.0.13-1) ... 135s Setting up r-cran-curl (5.2.3+dfsg-1) ... 135s Setting up r-cran-codetools (0.2-20-1) ... 135s Setting up r-cran-brio (1.1.5-1) ... 135s Setting up r-cran-diffobj (0.3.5-1) ... 135s Setting up r-bioc-biocgenerics (0.50.0-2) ... 135s Setting up r-cran-rlang (1.1.4-1) ... 135s Setting up littler (0.3.20-1) ... 135s Setting up gfortran-s390x-linux-gnu (4:14.1.0-2ubuntu1) ... 135s Setting up r-cran-xfun (0.45+dfsg-1) ... 135s Setting up r-cran-sys (3.4.2-1) ... 135s Setting up r-cran-plogr (0.2.0-3build1) ... 135s Setting up r-cran-withr (3.0.0+dfsg-1) ... 135s Setting up r-cran-processx (3.8.4-1) ... 135s Setting up r-cran-mime (0.12-2) ... 135s Setting up r-cran-praise (1.0.0-4build1) ... 135s Setting up r-cran-base64enc (0.1-3-3) ... 135s Setting up r-cran-iterators (1.0.14-1) ... 135s Setting up r-cran-digest (0.6.36-1) ... 135s Setting up r-cran-yaml (2.3.8-2) ... 135s Setting up r-cran-evaluate (0.24.0-1) ... 135s Setting up r-cran-dbi (1.2.3-1) ... 135s Setting up r-cran-highr (0.11+dfsg-1) ... 135s Setting up r-cran-foreach (1.5.2-1) ... 135s Setting up r-cran-fansi (1.0.5-1) ... 135s Setting up r-cran-glue (1.7.0-1) ... 135s Setting up r-cran-bit (4.0.5-1) ... 135s Setting up r-cran-xtable (1:1.8-4-2) ... 135s Setting up r-cran-cli (3.6.2-1) ... 135s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 135s Setting up r-cran-rprojroot (2.0.4-1) ... 135s Setting up r-cran-bit64 (4.0.5-1) ... 135s Setting up gcc (4:14.1.0-2ubuntu1) ... 135s Setting up r-bioc-zlibbioc (1.50.0+dfsg-2) ... 135s Setting up r-cran-askpass (1.2.0-1) ... 135s Setting up r-cran-fastmap (1.1.1-1) ... 135s Setting up r-cran-png (0.1-8-1build2) ... 135s Setting up r-cran-r.methodss3 (1.8.2-1) ... 135s Setting up r-bioc-biobase (2.64.0-4) ... 135s Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... 135s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 135s Setting up r-cran-utf8 (1.2.4-1) ... 135s Setting up r-cran-cpp11 (0.4.7-1) ... 135s Setting up r-bioc-s4vectors (0.42.1+dfsg-2) ... 135s Setting up r-cran-later (1.3.2+dfsg-1) ... 135s Setting up r-cran-doparallel (1.0.17-1) ... 135s Setting up r-cran-htmltools (0.5.8.1-1) ... 135s Setting up r-cran-tinytex (0.51-1) ... 135s Setting up r-cran-knitr (1.47+dfsg-1) ... 135s Setting up g++ (4:14.1.0-2ubuntu1) ... 135s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 135s Setting up r-cran-cachem (1.0.8-1) ... 135s Setting up r-cran-sass (0.4.9+dfsg-1) ... 135s Setting up build-essential (12.10ubuntu1) ... 135s Setting up r-bioc-iranges (2.38.1-1) ... 135s Setting up r-cran-rjson (0.2.21-1) ... 135s Setting up r-cran-vctrs (0.6.5-1) ... 135s Setting up r-cran-pillar (1.9.0+dfsg-1) ... 135s Setting up r-cran-openssl (2.2.0+dfsg-1) ... 135s Setting up r-cran-callr (3.7.6-1) ... 135s Setting up r-cran-desc (1.4.3-1) ... 135s Setting up r-cran-tibble (3.2.1+dfsg-2) ... 135s Setting up r-cran-fontawesome (0.5.2-1) ... 135s Setting up r-cran-r.oo (1.26.0-1) ... 135s Setting up gfortran (4:14.1.0-2ubuntu1) ... 135s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 135s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 135s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 135s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 135s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 135s Setting up r-cran-httr2 (1.0.2-1) ... 135s Setting up r-cran-httr (1.4.7+dfsg-1) ... 135s Setting up r-cran-memoise (2.0.1-1) ... 135s Setting up r-cran-promises (1.3.0+dfsg-1) ... 135s Setting up r-cran-blob (1.2.4-1) ... 135s Setting up r-bioc-xvector (0.44.0-1) ... 135s Setting up r-cran-pkgbuild (1.4.4-1) ... 135s Setting up r-cran-rsqlite (2.3.7-2) ... 135s Setting up r-cran-pkgload (1.4.0-1) ... 135s Setting up r-cran-r.utils (2.12.3-1) ... 135s Setting up r-base-dev (4.4.1-1) ... 135s Setting up r-bioc-ucsc.utils (1.0.0+ds-2) ... 135s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 135s Setting up r-cran-rematch2 (2.1.2-2build1) ... 135s Setting up r-cran-yulab.utils (0.1.4-1) ... 135s Setting up r-bioc-genomeinfodb (1.40.1+dfsg-1) ... 135s Setting up r-cran-bslib (0.7.0+dfsg-1) ... 135s Setting up r-cran-waldo (0.5.2-1build1) ... 135s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 135s Setting up r-bioc-biostrings (2.72.1+dfsg-1) ... 135s Setting up r-cran-shiny (1.8.1.1+dfsg-1) ... 135s Setting up r-cran-testthat (3.2.1.1-1) ... 135s Setting up r-cran-rmarkdown (2.27+dfsg-1) ... 135s Setting up r-bioc-pwalign (1.0.0-2) ... 135s Setting up r-bioc-keggrest (1.44.1+dfsg-1) ... 135s Setting up r-bioc-annotationdbi (1.66.0-1) ... 135s Setting up r-bioc-go.db (3.19.1-1) ... 135s Setting up r-bioc-gosemsim (2.30.2-1) ... 135s Setting up r-bioc-rcpi (1.40.2+ds-1) ... 135s Setting up autopkgtest-satdep (0) ... 135s Processing triggers for man-db (2.12.1-3) ... 135s Processing triggers for install-info (7.1.1-1) ... 135s Processing triggers for libc-bin (2.40-1ubuntu3) ... 140s (Reading database ... 75505 files and directories currently installed.) 140s Removing autopkgtest-satdep (0) ... 141s autopkgtest [06:33:23]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 141s autopkgtest [06:33:23]: test pkg-r-autopkgtest: [----------------------- 141s Test: Try to load the R library Rcpi 141s 141s R version 4.4.1 (2024-06-14) -- "Race for Your Life" 141s Copyright (C) 2024 The R Foundation for Statistical Computing 141s Platform: s390x-ibm-linux-gnu 141s 141s R is free software and comes with ABSOLUTELY NO WARRANTY. 141s You are welcome to redistribute it under certain conditions. 141s Type 'license()' or 'licence()' for distribution details. 141s 141s R is a collaborative project with many contributors. 141s Type 'contributors()' for more information and 141s 'citation()' on how to cite R or R packages in publications. 141s 141s Type 'demo()' for some demos, 'help()' for on-line help, or 141s 'help.start()' for an HTML browser interface to help. 141s Type 'q()' to quit R. 141s 141s > library('Rcpi') 144s 144s > 144s > 144s Other tests are currently unsupported! 144s They will be progressively added. 145s autopkgtest [06:33:27]: test pkg-r-autopkgtest: -----------------------] 145s autopkgtest [06:33:27]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 145s pkg-r-autopkgtest PASS 145s autopkgtest [06:33:27]: @@@@@@@@@@@@@@@@@@@@ summary 145s pkg-r-autopkgtest PASS 158s nova [W] Using flock in prodstack6-s390x 158s Creating nova instance adt-plucky-s390x-r-bioc-rcpi-20241102-063102-juju-7f2275-prod-proposed-migration-environment-2-d1222c67-059c-4513-9aae-52bb7fecdef3 from image adt/ubuntu-plucky-s390x-server-20241101.img (UUID efc880a6-ff20-4207-a161-b1113fd9bea7)...