1s autopkgtest [17:44:43]: starting date and time: 2025-03-15 17:44:43+0000 1s autopkgtest [17:44:43]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 1s autopkgtest [17:44:43]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.z5w14wg6/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-bioc-iranges --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-s390x-3.secgroup --name adt-plucky-s390x-r-bioc-iranges-20250315-174442-juju-7f2275-prod-proposed-migration-environment-2-8da4c0cb-56e5-4287-9b04-85406fa188ab --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 135s autopkgtest [17:46:57]: testbed dpkg architecture: s390x 136s autopkgtest [17:46:58]: testbed apt version: 2.9.33 136s autopkgtest [17:46:58]: @@@@@@@@@@@@@@@@@@@@ test bed setup 136s autopkgtest [17:46:58]: testbed release detected to be: None 137s autopkgtest [17:46:59]: updating testbed package index (apt update) 137s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 137s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 138s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 138s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 138s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 138s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 138s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 138s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [113 kB] 138s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1824 B] 138s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B] 138s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [320 kB] 138s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [13.4 kB] 138s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3776 B] 138s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [240 B] 139s Fetched 1073 kB in 2s (688 kB/s) 139s Reading package lists... 140s Reading package lists... 140s Building dependency tree... 140s Reading state information... 140s Calculating upgrade... 140s Calculating upgrade... 140s The following packages were automatically installed and are no longer required: 140s libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 140s linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic 140s linux-modules-6.11.0-8-generic linux-tools-6.11.0-8 140s linux-tools-6.11.0-8-generic 140s Use 'sudo apt autoremove' to remove them. 140s The following packages will be upgraded: 140s pinentry-curses python3-jinja2 strace 140s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 140s Need to get 652 kB of archives. 140s After this operation, 27.6 kB of additional disk space will be used. 140s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB] 141s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x pinentry-curses s390x 1.3.1-2ubuntu3 [42.9 kB] 141s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 142s Fetched 652 kB in 1s (652 kB/s) 142s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81428 files and directories currently installed.) 142s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ... 142s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 142s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_s390x.deb ... 142s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 142s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 142s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 142s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 142s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 142s Setting up strace (6.13+ds-1ubuntu1) ... 142s Processing triggers for man-db (2.13.0-1) ... 143s Reading package lists... 143s Building dependency tree... 143s Reading state information... 143s Solving dependencies... 143s The following packages will be REMOVED: 143s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 143s linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 143s linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8* 143s linux-tools-6.11.0-8-generic* 143s 0 upgraded, 0 newly installed, 9 to remove and 5 not upgraded. 143s After this operation, 167 MB disk space will be freed. 143s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81428 files and directories currently installed.) 143s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 143s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 143s Removing libpython3.12t64:s390x (3.12.9-1) ... 143s Removing libpython3.12-stdlib:s390x (3.12.9-1) ... 143s Removing libnsl2:s390x (1.3.0-3build3) ... 143s Removing libpython3.12-minimal:s390x (3.12.9-1) ... 143s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 143s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 144s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 144s Processing triggers for libc-bin (2.41-1ubuntu1) ... 144s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56328 files and directories currently installed.) 144s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ... 144s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 144s autopkgtest [17:47:06]: upgrading testbed (apt dist-upgrade and autopurge) 144s Reading package lists... 144s Building dependency tree... 144s Reading state information... 145s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 145s Starting 2 pkgProblemResolver with broken count: 0 145s Done 145s Entering ResolveByKeep 145s 145s Calculating upgrade... 145s The following packages will be upgraded: 145s libc-bin libc-dev-bin libc6 libc6-dev locales 145s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 145s Need to get 9512 kB of archives. 145s After this operation, 8192 B of additional disk space will be used. 145s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6-dev s390x 2.41-1ubuntu2 [1678 kB] 147s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-dev-bin s390x 2.41-1ubuntu2 [24.3 kB] 147s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6 s390x 2.41-1ubuntu2 [2892 kB] 150s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-bin s390x 2.41-1ubuntu2 [671 kB] 150s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x locales all 2.41-1ubuntu2 [4246 kB] 154s Preconfiguring packages ... 154s Fetched 9512 kB in 9s (1056 kB/s) 154s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 154s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_s390x.deb ... 154s Unpacking libc6-dev:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 155s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_s390x.deb ... 155s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 155s Preparing to unpack .../libc6_2.41-1ubuntu2_s390x.deb ... 155s Unpacking libc6:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 155s Setting up libc6:s390x (2.41-1ubuntu2) ... 155s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 155s Preparing to unpack .../libc-bin_2.41-1ubuntu2_s390x.deb ... 155s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 155s Setting up libc-bin (2.41-1ubuntu2) ... 155s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 155s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 155s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 155s Setting up locales (2.41-1ubuntu2) ... 155s Generating locales (this might take a while)... 156s en_US.UTF-8... done 156s Generation complete. 156s Setting up libc-dev-bin (2.41-1ubuntu2) ... 156s Setting up libc6-dev:s390x (2.41-1ubuntu2) ... 156s Processing triggers for man-db (2.13.0-1) ... 157s Processing triggers for systemd (257.3-1ubuntu3) ... 158s Reading package lists... 158s Building dependency tree... 158s Reading state information... 158s Starting pkgProblemResolver with broken count: 0 158s Starting 2 pkgProblemResolver with broken count: 0 158s Done 158s Solving dependencies... 158s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 158s autopkgtest [17:47:20]: rebooting testbed after setup commands that affected boot 162s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 176s autopkgtest [17:47:38]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP Wed Mar 12 14:53:49 UTC 2025 179s autopkgtest [17:47:41]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-iranges 181s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-iranges 2.40.1-2 (dsc) [2182 B] 181s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-iranges 2.40.1-2 (tar) [487 kB] 181s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-iranges 2.40.1-2 (diff) [5564 B] 181s gpgv: Signature made Sun Jan 12 02:44:20 2025 UTC 181s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 181s gpgv: issuer "crusoe@debian.org" 181s gpgv: Can't check signature: No public key 181s dpkg-source: warning: cannot verify inline signature for ./r-bioc-iranges_2.40.1-2.dsc: no acceptable signature found 181s autopkgtest [17:47:43]: testing package r-bioc-iranges version 2.40.1-2 182s autopkgtest [17:47:44]: build not needed 183s autopkgtest [17:47:45]: test pkg-r-autopkgtest: preparing testbed 184s Reading package lists... 184s Building dependency tree... 184s Reading state information... 184s Starting pkgProblemResolver with broken count: 0 184s Starting 2 pkgProblemResolver with broken count: 0 184s Done 184s The following NEW packages will be installed: 184s build-essential cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu 184s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 184s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 184s g++ g++-14 g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14 184s gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-14 184s gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools 184s javascript-common libasan8 libbibtex-parser-perl libblas-dev libblas3 184s libboost-dev libboost1.83-dev libbz2-dev libcairo2 libcc1-0 libdatrie1 184s libdeflate-dev libdeflate0 libfontconfig1 libfreetype6 libgcc-14-dev 184s libgfortran-14-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 184s libice6 libicu-dev libio-string-perl libisl23 libitm1 libjbig0 libjpeg-dev 184s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap 184s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 184s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 184s libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 184s libjs-popper.js libjs-prettify libjs-sifter.js 184s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 184s liblatex-tounicode-perl liblua5.4-0 liblzma-dev libmpc3 libmpfi0 184s libncurses-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 184s libpaper-utils libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 184s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libptexenc1 184s libreadline-dev libsharpyuv0 libsm6 libstdc++-14-dev libsynctex2 libtcl8.6 184s libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev 184s libtk8.6 libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 libxft2 184s libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6t64 libzzip-0-13t64 littler 184s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 184s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev 184s r-bioc-annotationdbi r-bioc-biobase r-bioc-biocgenerics r-bioc-biocio 184s r-bioc-biocparallel r-bioc-biocstyle r-bioc-biocversion r-bioc-biostrings 184s r-bioc-delayedarray r-bioc-genomeinfodb r-bioc-genomeinfodbdata 184s r-bioc-genomicalignments r-bioc-genomicfeatures r-bioc-genomicranges 184s r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics r-bioc-rhtslib 184s r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors 184s r-bioc-sparsearray r-bioc-summarizedexperiment r-bioc-ucsc.utils 184s r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc 184s r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops 184s r-cran-blob r-cran-bookdown r-cran-bslib r-cran-cachem r-cran-cli 184s r-cran-codetools r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-curl 184s r-cran-dbi r-cran-digest r-cran-evaluate r-cran-fastmap r-cran-fontawesome 184s r-cran-formatr r-cran-fs r-cran-futile.logger r-cran-futile.options 184s r-cran-glue r-cran-highr r-cran-htmltools r-cran-httpuv r-cran-httr 184s r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-lambda.r r-cran-later 184s r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-matrix 184s r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-openssl 184s r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr r-cran-png r-cran-promises 184s r-cran-r6 r-cran-rappdirs r-cran-rcpp r-cran-rcurl r-cran-restfulr 184s r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite r-cran-runit 184s r-cran-sass r-cran-shiny r-cran-snow r-cran-sourcetools r-cran-sys 184s r-cran-tinytex r-cran-vctrs r-cran-withr r-cran-xfun r-cran-xml 184s r-cran-xtable r-cran-yaml t1utils tex-common texlive-base 184s texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common 184s xdg-utils zip zlib1g-dev 184s 0 upgraded, 248 newly installed, 0 to remove and 0 not upgraded. 184s Need to get 423 MB of archives. 184s After this operation, 1405 MB of additional disk space will be used. 184s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libisl23 s390x 0.27-1 [704 kB] 185s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB] 185s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [9572 kB] 193s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14 s390x 14.2.0-17ubuntu3 [1028 B] 193s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [5556 B] 193s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x cpp s390x 4:14.2.0-1ubuntu1 [22.4 kB] 193s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libcc1-0 s390x 15-20250222-0ubuntu1 [49.2 kB] 193s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 15-20250222-0ubuntu1 [152 kB] 193s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libitm1 s390x 15-20250222-0ubuntu1 [31.2 kB] 193s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libasan8 s390x 15-20250222-0ubuntu1 [2970 kB] 196s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libubsan1 s390x 15-20250222-0ubuntu1 [1212 kB] 197s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-14-dev s390x 14.2.0-17ubuntu3 [1037 kB] 199s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [18.7 MB] 219s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14 s390x 14.2.0-17ubuntu3 [526 kB] 219s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1204 B] 219s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x gcc s390x 4:14.2.0-1ubuntu1 [5004 B] 219s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++-14-dev s390x 14.2.0-17ubuntu3 [2611 kB] 222s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [11.0 MB] 233s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14 s390x 14.2.0-17ubuntu3 [21.8 kB] 233s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x g++-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [956 B] 233s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x g++ s390x 4:14.2.0-1ubuntu1 [1080 B] 233s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x build-essential s390x 12.10ubuntu1 [4930 B] 233s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x dctrl-tools s390x 2.24-3build3 [106 kB] 233s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB] 233s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 234s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 235s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-2ubuntu1 [37.5 kB] 235s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-2ubuntu1 [150 kB] 235s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig s390x 2.15.0-2ubuntu1 [191 kB] 235s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 235s Get:31 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 236s Get:32 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-lmodern all 2.005-1 [4799 kB] 240s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 242s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 15-20250222-0ubuntu1 [620 kB] 242s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran-14-dev s390x 14.2.0-17ubuntu3 [654 kB] 243s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [10.3 MB] 252s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14 s390x 14.2.0-17ubuntu3 [13.6 kB] 252s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1012 B] 252s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran s390x 4:14.2.0-1ubuntu1 [1160 B] 252s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x icu-devtools s390x 76.1-1ubuntu2 [225 kB] 252s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x javascript-common all 12 [5216 B] 252s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libio-string-perl all 1.08-4 [11.1 kB] 252s Get:43 http://ftpmaster.internal/ubuntu plucky/universe s390x liblatex-tounicode-perl all 0.55-1 [28.8 kB] 252s Get:44 http://ftpmaster.internal/ubuntu plucky/universe s390x libbibtex-parser-perl all 1.05+dfsg-1 [16.5 kB] 252s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.1-2 [252 kB] 252s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x libblas-dev s390x 3.12.1-2 [254 kB] 252s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x libboost1.83-dev s390x 1.83.0-4.1ubuntu2 [10.7 MB] 262s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x libboost-dev s390x 1.83.0.2ubuntu1 [4470 B] 262s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x libbz2-dev s390x 1.0.8-6 [39.1 kB] 262s Get:50 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB] 263s Get:51 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB] 263s Get:52 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B] 263s Get:53 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB] 263s Get:54 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB] 263s Get:55 http://ftpmaster.internal/ubuntu plucky/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB] 263s Get:56 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.23-1 [46.1 kB] 263s Get:57 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate-dev s390x 1.23-1 [52.2 kB] 263s Get:58 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB] 263s Get:59 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB] 264s Get:60 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB] 264s Get:61 http://ftpmaster.internal/ubuntu plucky/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB] 264s Get:62 http://ftpmaster.internal/ubuntu plucky/main s390x libicu-dev s390x 76.1-1ubuntu2 [12.2 MB] 275s Get:63 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB] 275s Get:64 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8-dev s390x 2.1.5-3ubuntu2 [281 kB] 276s Get:65 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 276s Get:66 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B] 276s Get:67 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B] 276s Get:68 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 276s Get:69 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 276s Get:70 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 276s Get:71 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-d3 all 3.5.17-4 [132 kB] 276s Get:72 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-es5-shim all 4.6.7-2 [39.8 kB] 276s Get:73 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 277s Get:74 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 277s Get:75 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 277s Get:76 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 277s Get:77 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 277s Get:78 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 277s Get:79 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 278s Get:80 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 278s Get:81 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 278s Get:82 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 278s Get:83 http://ftpmaster.internal/ubuntu plucky/main s390x libkpathsea6 s390x 2024.20240313.70630+ds-5build2 [66.9 kB] 278s Get:84 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.1-2 [2971 kB] 281s Get:85 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack-dev s390x 3.12.1-2 [5967 kB] 287s Get:86 http://ftpmaster.internal/ubuntu plucky/main s390x liblua5.4-0 s390x 5.4.7-1 [174 kB] 287s Get:87 http://ftpmaster.internal/ubuntu plucky/universe s390x libmpfi0 s390x 1.5.4+ds-4 [34.1 kB] 287s Get:88 http://ftpmaster.internal/ubuntu plucky/main s390x libncurses-dev s390x 6.5+20250216-2 [407 kB] 287s Get:89 http://ftpmaster.internal/ubuntu plucky/main s390x libthai-data all 0.1.29-2build1 [158 kB] 288s Get:90 http://ftpmaster.internal/ubuntu plucky/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB] 288s Get:91 http://ftpmaster.internal/ubuntu plucky/main s390x libpango-1.0-0 s390x 1.56.2-1 [253 kB] 288s Get:92 http://ftpmaster.internal/ubuntu plucky/main s390x libpangoft2-1.0-0 s390x 1.56.2-1 [50.2 kB] 288s Get:93 http://ftpmaster.internal/ubuntu plucky/main s390x libpangocairo-1.0-0 s390x 1.56.2-1 [28.2 kB] 288s Get:94 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB] 288s Get:95 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB] 288s Get:96 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-16-0 s390x 10.45-1 [259 kB] 288s Get:97 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-32-0 s390x 10.45-1 [245 kB] 288s Get:98 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-posix3 s390x 10.45-1 [7080 B] 288s Get:99 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-dev s390x 10.45-1 [899 kB] 289s Get:100 http://ftpmaster.internal/ubuntu plucky/main s390x libpkgconf3 s390x 1.8.1-4 [31.2 kB] 290s Get:101 http://ftpmaster.internal/ubuntu plucky/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB] 291s Get:102 http://ftpmaster.internal/ubuntu plucky/main s390x libpng-dev s390x 1.6.47-1 [278 kB] 291s Get:103 http://ftpmaster.internal/ubuntu plucky/universe s390x libpotrace0 s390x 1.16-2build1 [18.7 kB] 291s Get:104 http://ftpmaster.internal/ubuntu plucky/main s390x libptexenc1 s390x 2024.20240313.70630+ds-5build2 [43.4 kB] 291s Get:105 http://ftpmaster.internal/ubuntu plucky/main s390x libreadline-dev s390x 8.2-6 [187 kB] 291s Get:106 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB] 291s Get:107 http://ftpmaster.internal/ubuntu plucky/main s390x libsm6 s390x 2:1.2.4-1 [18.4 kB] 291s Get:108 http://ftpmaster.internal/ubuntu plucky/main s390x libsynctex2 s390x 2024.20240313.70630+ds-5build2 [64.6 kB] 291s Get:109 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB] 292s Get:110 http://ftpmaster.internal/ubuntu plucky/universe s390x libteckit0 s390x 2.5.12+ds1-1 [433 kB] 293s Get:111 http://ftpmaster.internal/ubuntu plucky/main s390x libtexlua53-5 s390x 2024.20240313.70630+ds-5build2 [131 kB] 293s Get:112 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB] 293s Get:113 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB] 293s Get:114 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB] 293s Get:115 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB] 293s Get:116 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B] 293s Get:117 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.16-1 [830 kB] 294s Get:118 http://ftpmaster.internal/ubuntu plucky/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB] 294s Get:119 http://ftpmaster.internal/ubuntu plucky/main s390x libxmu6 s390x 2:1.1.3-3build2 [53.0 kB] 294s Get:120 http://ftpmaster.internal/ubuntu plucky/main s390x libxpm4 s390x 1:3.5.17-1build2 [41.2 kB] 294s Get:121 http://ftpmaster.internal/ubuntu plucky/main s390x libxaw7 s390x 2:1.0.16-1 [201 kB] 294s Get:122 http://ftpmaster.internal/ubuntu plucky/main s390x libxi6 s390x 2:1.8.2-1 [35.4 kB] 294s Get:123 http://ftpmaster.internal/ubuntu plucky/universe s390x libzzip-0-13t64 s390x 0.13.78+dfsg.1-0.1 [29.8 kB] 294s Get:124 http://ftpmaster.internal/ubuntu plucky/main s390x zip s390x 3.0-14ubuntu2 [187 kB] 295s Get:125 http://ftpmaster.internal/ubuntu plucky/main s390x unzip s390x 6.0-28ubuntu6 [186 kB] 295s Get:126 http://ftpmaster.internal/ubuntu plucky/main s390x xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 295s Get:127 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-core s390x 4.4.3-1 [28.6 MB] 319s Get:128 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-littler s390x 0.3.20-2 [95.0 kB] 319s Get:129 http://ftpmaster.internal/ubuntu plucky/universe s390x littler all 0.3.20-2 [2554 B] 319s Get:130 http://ftpmaster.internal/ubuntu plucky/universe s390x node-bootstrap-sass all 3.4.3-2 [187 kB] 319s Get:131 http://ftpmaster.internal/ubuntu plucky/universe s390x node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 319s Get:132 http://ftpmaster.internal/ubuntu plucky/universe s390x node-normalize.css all 8.0.1-5 [10.8 kB] 319s Get:133 http://ftpmaster.internal/ubuntu plucky/universe s390x pandoc-data all 3.1.11.1-3build1 [78.8 kB] 319s Get:134 http://ftpmaster.internal/ubuntu plucky/universe s390x pandoc s390x 3.1.11.1+ds-2 [52.5 MB] 368s Get:135 http://ftpmaster.internal/ubuntu plucky/main s390x liblzma-dev s390x 5.6.4-1 [183 kB] 368s Get:136 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf-bin s390x 1.8.1-4 [21.5 kB] 368s Get:137 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf s390x 1.8.1-4 [16.7 kB] 368s Get:138 http://ftpmaster.internal/ubuntu plucky/main s390x libtirpc-dev s390x 1.3.4+ds-1.3 [196 kB] 368s Get:139 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-dev all 4.4.3-1 [4176 B] 368s Get:140 http://ftpmaster.internal/ubuntu plucky/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 368s Get:141 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocgenerics all 0.52.0-2 [624 kB] 369s Get:142 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biobase s390x 2.66.0-2 [2339 kB] 372s Get:143 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-s4vectors s390x 0.44.0+dfsg-2 [2063 kB] 374s Get:144 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-iranges s390x 2.40.1-2 [2301 kB] 376s Get:145 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-dbi all 1.2.3-1 [853 kB] 377s Get:146 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bit s390x 4.6.0+dfsg-1 [471 kB] 377s Get:147 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bit64 s390x 4.6.0-1-1ubuntu2 [503 kB] 378s Get:148 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rlang s390x 1.1.5-1 [1713 kB] 380s Get:149 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cli s390x 3.6.4-1 [1379 kB] 381s Get:150 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-glue s390x 1.8.0-1 [164 kB] 381s Get:151 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 382s Get:152 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB] 383s Get:153 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-blob all 1.2.4-1 [49.8 kB] 383s Get:154 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fastmap s390x 1.2.0-1 [72.4 kB] 383s Get:155 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cachem s390x 1.1.0-1 [74.0 kB] 383s Get:156 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-memoise all 2.0.1-1 [53.9 kB] 383s Get:157 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 383s Get:158 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-plogr all 0.2.0-3build1 [15.1 kB] 383s Get:159 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cpp11 all 0.5.2-1 [233 kB] 384s Get:160 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rsqlite s390x 2.3.9-1 [1331 kB] 385s Get:161 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-curl s390x 6.2.1+dfsg-1ubuntu1 [196 kB] 385s Get:162 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-jsonlite s390x 1.9.1+dfsg-1 [447 kB] 386s Get:163 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mime s390x 0.12-2 [35.8 kB] 386s Get:164 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sys s390x 3.4.3-1 [45.2 kB] 386s Get:165 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-askpass s390x 1.2.1-1 [24.8 kB] 386s Get:166 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-openssl s390x 2.3.2+dfsg-1 [406 kB] 386s Get:167 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r6 all 2.6.1-1 [101 kB] 386s Get:168 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-httr all 1.4.7+dfsg-1 [459 kB] 387s Get:169 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-png s390x 0.1-8-1build2 [41.5 kB] 387s Get:170 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 387s Get:171 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-xvector s390x 0.46.0-2 [624 kB] 387s Get:172 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 388s Get:173 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 400s Get:174 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 404s Get:175 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-crayon all 1.5.3-1 [165 kB] 404s Get:176 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biostrings s390x 2.74.1+dfsg-2 [13.3 MB] 416s Get:177 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-keggrest all 1.46.0+dfsg-2 [183 kB] 417s Get:178 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-annotationdbi all 1.68.0-2 [4857 kB] 421s Get:179 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 421s Get:180 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-formatr all 1.14-2 [152 kB] 421s Get:181 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lambda.r all 1.2.4-2build1 [119 kB] 421s Get:182 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 421s Get:183 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 421s Get:184 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-snow all 1:0.4.4-2 [97.6 kB] 421s Get:185 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-codetools all 0.2-20-1 [90.5 kB] 421s Get:186 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bh all 1.84.0-1 [5962 B] 421s Get:187 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocparallel s390x 1.40.0-2 [1347 kB] 422s Get:188 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-base64enc s390x 0.1-3-3 [28.0 kB] 422s Get:189 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-digest s390x 0.6.37-1 [205 kB] 423s Get:190 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-htmltools s390x 0.5.8.1-1 [372 kB] 423s Get:191 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-evaluate all 1.0.3-1 [114 kB] 423s Get:192 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-xfun s390x 0.51+dfsg-1 [574 kB] 423s Get:193 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-highr all 0.11+dfsg-1 [38.5 kB] 423s Get:194 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-yaml s390x 2.3.10-1 [113 kB] 424s Get:195 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 428s Get:196 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-knitr all 1.49+dfsg-1 [859 kB] 429s Get:197 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 429s Get:198 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fs s390x 1.6.5+dfsg-1 [245 kB] 429s Get:199 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rappdirs s390x 0.3.3-1 [47.5 kB] 429s Get:200 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sass s390x 0.4.9+dfsg-1 [1019 kB] 430s Get:201 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 434s Get:202 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fontawesome all 0.5.3-1 [1331 kB] 435s Get:203 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tinytex all 0.56-1 [148 kB] 435s Get:204 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-modernizr all 3.13.0-0.1 [101 kB] 435s Get:205 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 435s Get:206 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcpp s390x 1.0.14-1 [2003 kB] 437s Get:207 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-later s390x 1.4.1+dfsg-1 [148 kB] 437s Get:208 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB] 437s Get:209 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-promises s390x 1.3.2+dfsg-1 [296 kB] 438s Get:210 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-httpuv s390x 1.6.15+dfsg-1 [507 kB] 438s Get:211 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-xtable all 1:1.8-4-2 [689 kB] 439s Get:212 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sourcetools s390x 0.1.7-1-1 [47.1 kB] 439s Get:213 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-withr all 3.0.2+dfsg-1 [214 kB] 439s Get:214 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-commonmark s390x 1.9.2-2 [142 kB] 439s Get:215 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 439s Get:216 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 442s Get:217 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 443s Get:218 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bookdown all 0.42+dfsg-1 [1409 kB] 445s Get:219 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 445s Get:220 http://ftpmaster.internal/ubuntu plucky/universe s390x tex-common all 6.19 [29.8 kB] 445s Get:221 http://ftpmaster.internal/ubuntu plucky/main s390x t1utils s390x 1.41-4build3 [65.6 kB] 445s Get:222 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-binaries s390x 2024.20240313.70630+ds-5build2 [9171 kB] 453s Get:223 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-base all 2024.20250114-1 [22.5 MB] 472s Get:224 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-latex-base all 2024.20250114-1 [1264 kB] 473s Get:225 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-bibtex-extra all 2024.20250114-1 [79.5 MB] 557s Get:226 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocversion all 3.20.0-2 [11.1 kB] 557s Get:227 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocstyle all 2.34.0+dfsg-1 [451 kB] 557s Get:228 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lattice s390x 0.22-6-1 [1340 kB] 559s Get:229 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-matrix s390x 1.7-3-1 [4449 kB] 564s Get:230 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-matrixstats s390x 1.5.0-1 [539 kB] 565s Get:231 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 565s Get:232 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-abind all 1.4-8-1 [66.9 kB] 565s Get:233 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-s4arrays s390x 1.6.0+dfsg-2 [700 kB] 566s Get:234 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-sparsearray s390x 1.6.2+dfsg-1 [1386 kB] 567s Get:235 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-delayedarray s390x 0.32.0+dfsg-2 [2068 kB] 570s Get:236 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-genomicranges s390x 1.58.0+dfsg-2 [2087 kB] 572s Get:237 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 573s Get:238 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bitops s390x 1.0-9-1 [30.1 kB] 573s Get:239 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-rhtslib s390x 3.2.0+dfsg-2 [1458 kB] 575s Get:240 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-rsamtools s390x 2.22.0+dfsg-2 [3729 kB] 579s Get:241 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-genomicalignments s390x 1.42.0-2 [2152 kB] 582s Get:242 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-xml s390x 3.99-0.18-1 [1744 kB] 584s Get:243 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcurl s390x 1.98-1.16+dfsg-1 [808 kB] 585s Get:244 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rjson s390x 0.2.23-1 [104 kB] 585s Get:245 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-restfulr s390x 0.0.15-1 [380 kB] 585s Get:246 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-rtracklayer s390x 1.66.0-2 [5235 kB] 592s Get:247 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-genomicfeatures all 1.58.0+dfsg-2 [937 kB] 593s Get:248 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-runit all 0.4.33-1 [377 kB] 594s Preconfiguring packages ... 594s Fetched 423 MB in 6min 49s (1033 kB/s) 594s Selecting previously unselected package libisl23:s390x. 594s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 594s Preparing to unpack .../000-libisl23_0.27-1_s390x.deb ... 594s Unpacking libisl23:s390x (0.27-1) ... 594s Selecting previously unselected package libmpc3:s390x. 594s Preparing to unpack .../001-libmpc3_1.3.1-1build2_s390x.deb ... 594s Unpacking libmpc3:s390x (1.3.1-1build2) ... 594s Selecting previously unselected package cpp-14-s390x-linux-gnu. 594s Preparing to unpack .../002-cpp-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ... 594s Unpacking cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ... 594s Selecting previously unselected package cpp-14. 594s Preparing to unpack .../003-cpp-14_14.2.0-17ubuntu3_s390x.deb ... 594s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 594s Selecting previously unselected package cpp-s390x-linux-gnu. 594s Preparing to unpack .../004-cpp-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ... 594s Unpacking cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 594s Selecting previously unselected package cpp. 594s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_s390x.deb ... 594s Unpacking cpp (4:14.2.0-1ubuntu1) ... 594s Selecting previously unselected package libcc1-0:s390x. 594s Preparing to unpack .../006-libcc1-0_15-20250222-0ubuntu1_s390x.deb ... 594s Unpacking libcc1-0:s390x (15-20250222-0ubuntu1) ... 594s Selecting previously unselected package libgomp1:s390x. 594s Preparing to unpack .../007-libgomp1_15-20250222-0ubuntu1_s390x.deb ... 594s Unpacking libgomp1:s390x (15-20250222-0ubuntu1) ... 594s Selecting previously unselected package libitm1:s390x. 594s Preparing to unpack .../008-libitm1_15-20250222-0ubuntu1_s390x.deb ... 594s Unpacking libitm1:s390x (15-20250222-0ubuntu1) ... 594s Selecting previously unselected package libasan8:s390x. 594s Preparing to unpack .../009-libasan8_15-20250222-0ubuntu1_s390x.deb ... 594s Unpacking libasan8:s390x (15-20250222-0ubuntu1) ... 594s Selecting previously unselected package libubsan1:s390x. 594s Preparing to unpack .../010-libubsan1_15-20250222-0ubuntu1_s390x.deb ... 594s Unpacking libubsan1:s390x (15-20250222-0ubuntu1) ... 594s Selecting previously unselected package libgcc-14-dev:s390x. 594s Preparing to unpack .../011-libgcc-14-dev_14.2.0-17ubuntu3_s390x.deb ... 594s Unpacking libgcc-14-dev:s390x (14.2.0-17ubuntu3) ... 594s Selecting previously unselected package gcc-14-s390x-linux-gnu. 594s Preparing to unpack .../012-gcc-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ... 594s Unpacking gcc-14-s390x-linux-gnu (14.2.0-17ubuntu3) ... 595s Selecting previously unselected package gcc-14. 595s Preparing to unpack .../013-gcc-14_14.2.0-17ubuntu3_s390x.deb ... 595s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 595s Selecting previously unselected package gcc-s390x-linux-gnu. 595s Preparing to unpack .../014-gcc-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ... 595s Unpacking gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 595s Selecting previously unselected package gcc. 595s Preparing to unpack .../015-gcc_4%3a14.2.0-1ubuntu1_s390x.deb ... 595s Unpacking gcc (4:14.2.0-1ubuntu1) ... 595s Selecting previously unselected package libstdc++-14-dev:s390x. 595s Preparing to unpack .../016-libstdc++-14-dev_14.2.0-17ubuntu3_s390x.deb ... 595s Unpacking libstdc++-14-dev:s390x (14.2.0-17ubuntu3) ... 595s Selecting previously unselected package g++-14-s390x-linux-gnu. 595s Preparing to unpack .../017-g++-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ... 595s Unpacking g++-14-s390x-linux-gnu (14.2.0-17ubuntu3) ... 595s Selecting previously unselected package g++-14. 595s Preparing to unpack .../018-g++-14_14.2.0-17ubuntu3_s390x.deb ... 595s Unpacking g++-14 (14.2.0-17ubuntu3) ... 595s Selecting previously unselected package g++-s390x-linux-gnu. 595s Preparing to unpack .../019-g++-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ... 595s Unpacking g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 595s Selecting previously unselected package g++. 595s Preparing to unpack .../020-g++_4%3a14.2.0-1ubuntu1_s390x.deb ... 595s Unpacking g++ (4:14.2.0-1ubuntu1) ... 595s Selecting previously unselected package build-essential. 595s Preparing to unpack .../021-build-essential_12.10ubuntu1_s390x.deb ... 595s Unpacking build-essential (12.10ubuntu1) ... 595s Selecting previously unselected package dctrl-tools. 595s Preparing to unpack .../022-dctrl-tools_2.24-3build3_s390x.deb ... 595s Unpacking dctrl-tools (2.24-3build3) ... 595s Selecting previously unselected package libfreetype6:s390x. 595s Preparing to unpack .../023-libfreetype6_2.13.3+dfsg-1_s390x.deb ... 595s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ... 595s Selecting previously unselected package fonts-dejavu-mono. 595s Preparing to unpack .../024-fonts-dejavu-mono_2.37-8_all.deb ... 595s Unpacking fonts-dejavu-mono (2.37-8) ... 595s Selecting previously unselected package fonts-dejavu-core. 595s Preparing to unpack .../025-fonts-dejavu-core_2.37-8_all.deb ... 595s Unpacking fonts-dejavu-core (2.37-8) ... 595s Selecting previously unselected package fontconfig-config. 595s Preparing to unpack .../026-fontconfig-config_2.15.0-2ubuntu1_s390x.deb ... 595s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 595s Selecting previously unselected package libfontconfig1:s390x. 595s Preparing to unpack .../027-libfontconfig1_2.15.0-2ubuntu1_s390x.deb ... 595s Unpacking libfontconfig1:s390x (2.15.0-2ubuntu1) ... 595s Selecting previously unselected package fontconfig. 595s Preparing to unpack .../028-fontconfig_2.15.0-2ubuntu1_s390x.deb ... 595s Unpacking fontconfig (2.15.0-2ubuntu1) ... 595s Selecting previously unselected package fonts-font-awesome. 595s Preparing to unpack .../029-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 595s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 595s Selecting previously unselected package fonts-glyphicons-halflings. 595s Preparing to unpack .../030-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 595s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 595s Selecting previously unselected package fonts-lmodern. 595s Preparing to unpack .../031-fonts-lmodern_2.005-1_all.deb ... 595s Unpacking fonts-lmodern (2.005-1) ... 595s Selecting previously unselected package fonts-mathjax. 595s Preparing to unpack .../032-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 595s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 596s Selecting previously unselected package libgfortran5:s390x. 596s Preparing to unpack .../033-libgfortran5_15-20250222-0ubuntu1_s390x.deb ... 596s Unpacking libgfortran5:s390x (15-20250222-0ubuntu1) ... 596s Selecting previously unselected package libgfortran-14-dev:s390x. 596s Preparing to unpack .../034-libgfortran-14-dev_14.2.0-17ubuntu3_s390x.deb ... 596s Unpacking libgfortran-14-dev:s390x (14.2.0-17ubuntu3) ... 596s Selecting previously unselected package gfortran-14-s390x-linux-gnu. 596s Preparing to unpack .../035-gfortran-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ... 596s Unpacking gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu3) ... 596s Selecting previously unselected package gfortran-14. 596s Preparing to unpack .../036-gfortran-14_14.2.0-17ubuntu3_s390x.deb ... 596s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 596s Selecting previously unselected package gfortran-s390x-linux-gnu. 596s Preparing to unpack .../037-gfortran-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ... 596s Unpacking gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 596s Selecting previously unselected package gfortran. 596s Preparing to unpack .../038-gfortran_4%3a14.2.0-1ubuntu1_s390x.deb ... 596s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 596s Selecting previously unselected package icu-devtools. 596s Preparing to unpack .../039-icu-devtools_76.1-1ubuntu2_s390x.deb ... 596s Unpacking icu-devtools (76.1-1ubuntu2) ... 596s Selecting previously unselected package javascript-common. 596s Preparing to unpack .../040-javascript-common_12_all.deb ... 596s Unpacking javascript-common (12) ... 596s Selecting previously unselected package libio-string-perl. 596s Preparing to unpack .../041-libio-string-perl_1.08-4_all.deb ... 596s Unpacking libio-string-perl (1.08-4) ... 596s Selecting previously unselected package liblatex-tounicode-perl. 596s Preparing to unpack .../042-liblatex-tounicode-perl_0.55-1_all.deb ... 596s Unpacking liblatex-tounicode-perl (0.55-1) ... 596s Selecting previously unselected package libbibtex-parser-perl. 596s Preparing to unpack .../043-libbibtex-parser-perl_1.05+dfsg-1_all.deb ... 596s Unpacking libbibtex-parser-perl (1.05+dfsg-1) ... 596s Selecting previously unselected package libblas3:s390x. 596s Preparing to unpack .../044-libblas3_3.12.1-2_s390x.deb ... 596s Unpacking libblas3:s390x (3.12.1-2) ... 596s Selecting previously unselected package libblas-dev:s390x. 596s Preparing to unpack .../045-libblas-dev_3.12.1-2_s390x.deb ... 596s Unpacking libblas-dev:s390x (3.12.1-2) ... 596s Selecting previously unselected package libboost1.83-dev:s390x. 596s Preparing to unpack .../046-libboost1.83-dev_1.83.0-4.1ubuntu2_s390x.deb ... 596s Unpacking libboost1.83-dev:s390x (1.83.0-4.1ubuntu2) ... 597s Selecting previously unselected package libboost-dev:s390x. 597s Preparing to unpack .../047-libboost-dev_1.83.0.2ubuntu1_s390x.deb ... 597s Unpacking libboost-dev:s390x (1.83.0.2ubuntu1) ... 597s Selecting previously unselected package libbz2-dev:s390x. 597s Preparing to unpack .../048-libbz2-dev_1.0.8-6_s390x.deb ... 597s Unpacking libbz2-dev:s390x (1.0.8-6) ... 597s Selecting previously unselected package libpixman-1-0:s390x. 597s Preparing to unpack .../049-libpixman-1-0_0.44.0-3_s390x.deb ... 597s Unpacking libpixman-1-0:s390x (0.44.0-3) ... 597s Selecting previously unselected package libxcb-render0:s390x. 597s Preparing to unpack .../050-libxcb-render0_1.17.0-2_s390x.deb ... 597s Unpacking libxcb-render0:s390x (1.17.0-2) ... 597s Selecting previously unselected package libxcb-shm0:s390x. 597s Preparing to unpack .../051-libxcb-shm0_1.17.0-2_s390x.deb ... 597s Unpacking libxcb-shm0:s390x (1.17.0-2) ... 597s Selecting previously unselected package libxrender1:s390x. 597s Preparing to unpack .../052-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ... 597s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ... 597s Selecting previously unselected package libcairo2:s390x. 597s Preparing to unpack .../053-libcairo2_1.18.2-2_s390x.deb ... 597s Unpacking libcairo2:s390x (1.18.2-2) ... 597s Selecting previously unselected package libdatrie1:s390x. 597s Preparing to unpack .../054-libdatrie1_0.2.13-3build1_s390x.deb ... 597s Unpacking libdatrie1:s390x (0.2.13-3build1) ... 597s Selecting previously unselected package libdeflate0:s390x. 597s Preparing to unpack .../055-libdeflate0_1.23-1_s390x.deb ... 597s Unpacking libdeflate0:s390x (1.23-1) ... 597s Selecting previously unselected package libdeflate-dev:s390x. 597s Preparing to unpack .../056-libdeflate-dev_1.23-1_s390x.deb ... 597s Unpacking libdeflate-dev:s390x (1.23-1) ... 597s Selecting previously unselected package libgraphite2-3:s390x. 597s Preparing to unpack .../057-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ... 597s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 597s Selecting previously unselected package libharfbuzz0b:s390x. 597s Preparing to unpack .../058-libharfbuzz0b_10.2.0-1_s390x.deb ... 597s Unpacking libharfbuzz0b:s390x (10.2.0-1) ... 597s Selecting previously unselected package x11-common. 597s Preparing to unpack .../059-x11-common_1%3a7.7+23ubuntu3_all.deb ... 597s Unpacking x11-common (1:7.7+23ubuntu3) ... 597s Selecting previously unselected package libice6:s390x. 597s Preparing to unpack .../060-libice6_2%3a1.1.1-1_s390x.deb ... 597s Unpacking libice6:s390x (2:1.1.1-1) ... 597s Selecting previously unselected package libicu-dev:s390x. 597s Preparing to unpack .../061-libicu-dev_76.1-1ubuntu2_s390x.deb ... 597s Unpacking libicu-dev:s390x (76.1-1ubuntu2) ... 597s Selecting previously unselected package libjpeg-turbo8:s390x. 597s Preparing to unpack .../062-libjpeg-turbo8_2.1.5-3ubuntu2_s390x.deb ... 597s Unpacking libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ... 597s Selecting previously unselected package libjpeg-turbo8-dev:s390x. 597s Preparing to unpack .../063-libjpeg-turbo8-dev_2.1.5-3ubuntu2_s390x.deb ... 597s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ... 597s Selecting previously unselected package libjpeg8:s390x. 597s Preparing to unpack .../064-libjpeg8_8c-2ubuntu11_s390x.deb ... 597s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 597s Selecting previously unselected package libjpeg8-dev:s390x. 597s Preparing to unpack .../065-libjpeg8-dev_8c-2ubuntu11_s390x.deb ... 597s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ... 597s Selecting previously unselected package libjpeg-dev:s390x. 597s Preparing to unpack .../066-libjpeg-dev_8c-2ubuntu11_s390x.deb ... 597s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ... 597s Selecting previously unselected package libjs-bootstrap. 597s Preparing to unpack .../067-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 597s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 597s Selecting previously unselected package libjs-popper.js. 597s Preparing to unpack .../068-libjs-popper.js_1.16.1+ds-6_all.deb ... 597s Unpacking libjs-popper.js (1.16.1+ds-6) ... 597s Selecting previously unselected package libjs-bootstrap4. 597s Preparing to unpack .../069-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 597s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 597s Selecting previously unselected package libjs-d3. 597s Preparing to unpack .../070-libjs-d3_3.5.17-4_all.deb ... 597s Unpacking libjs-d3 (3.5.17-4) ... 597s Selecting previously unselected package libjs-es5-shim. 597s Preparing to unpack .../071-libjs-es5-shim_4.6.7-2_all.deb ... 597s Unpacking libjs-es5-shim (4.6.7-2) ... 597s Selecting previously unselected package libjs-highlight.js. 597s Preparing to unpack .../072-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 597s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 597s Selecting previously unselected package libjs-jquery. 597s Preparing to unpack .../073-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 597s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 598s Selecting previously unselected package libjs-jquery-datatables. 598s Preparing to unpack .../074-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 598s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 598s Selecting previously unselected package libjs-sifter.js. 598s Preparing to unpack .../075-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 598s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 598s Selecting previously unselected package libjs-microplugin.js. 598s Preparing to unpack .../076-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 598s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 598s Selecting previously unselected package libjs-jquery-selectize.js. 598s Preparing to unpack .../077-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 598s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 598s Selecting previously unselected package libjs-jquery-ui. 598s Preparing to unpack .../078-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 598s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 598s Selecting previously unselected package libjs-json. 598s Preparing to unpack .../079-libjs-json_0~20221030+~1.0.8-1_all.deb ... 598s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 598s Selecting previously unselected package libjs-lunr. 598s Preparing to unpack .../080-libjs-lunr_2.3.9~dfsg-2_all.deb ... 598s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 598s Selecting previously unselected package libjs-prettify. 598s Preparing to unpack .../081-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 598s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 598s Selecting previously unselected package libkpathsea6:s390x. 598s Preparing to unpack .../082-libkpathsea6_2024.20240313.70630+ds-5build2_s390x.deb ... 598s Unpacking libkpathsea6:s390x (2024.20240313.70630+ds-5build2) ... 598s Selecting previously unselected package liblapack3:s390x. 598s Preparing to unpack .../083-liblapack3_3.12.1-2_s390x.deb ... 598s Unpacking liblapack3:s390x (3.12.1-2) ... 598s Selecting previously unselected package liblapack-dev:s390x. 598s Preparing to unpack .../084-liblapack-dev_3.12.1-2_s390x.deb ... 598s Unpacking liblapack-dev:s390x (3.12.1-2) ... 598s Selecting previously unselected package liblua5.4-0:s390x. 598s Preparing to unpack .../085-liblua5.4-0_5.4.7-1_s390x.deb ... 598s Unpacking liblua5.4-0:s390x (5.4.7-1) ... 598s Selecting previously unselected package libmpfi0:s390x. 598s Preparing to unpack .../086-libmpfi0_1.5.4+ds-4_s390x.deb ... 598s Unpacking libmpfi0:s390x (1.5.4+ds-4) ... 598s Selecting previously unselected package libncurses-dev:s390x. 598s Preparing to unpack .../087-libncurses-dev_6.5+20250216-2_s390x.deb ... 598s Unpacking libncurses-dev:s390x (6.5+20250216-2) ... 598s Selecting previously unselected package libthai-data. 598s Preparing to unpack .../088-libthai-data_0.1.29-2build1_all.deb ... 598s Unpacking libthai-data (0.1.29-2build1) ... 598s Selecting previously unselected package libthai0:s390x. 598s Preparing to unpack .../089-libthai0_0.1.29-2build1_s390x.deb ... 598s Unpacking libthai0:s390x (0.1.29-2build1) ... 598s Selecting previously unselected package libpango-1.0-0:s390x. 598s Preparing to unpack .../090-libpango-1.0-0_1.56.2-1_s390x.deb ... 598s Unpacking libpango-1.0-0:s390x (1.56.2-1) ... 598s Selecting previously unselected package libpangoft2-1.0-0:s390x. 598s Preparing to unpack .../091-libpangoft2-1.0-0_1.56.2-1_s390x.deb ... 598s Unpacking libpangoft2-1.0-0:s390x (1.56.2-1) ... 598s Selecting previously unselected package libpangocairo-1.0-0:s390x. 598s Preparing to unpack .../092-libpangocairo-1.0-0_1.56.2-1_s390x.deb ... 598s Unpacking libpangocairo-1.0-0:s390x (1.56.2-1) ... 598s Selecting previously unselected package libpaper2:s390x. 598s Preparing to unpack .../093-libpaper2_2.2.5-0.3_s390x.deb ... 598s Unpacking libpaper2:s390x (2.2.5-0.3) ... 598s Selecting previously unselected package libpaper-utils. 598s Preparing to unpack .../094-libpaper-utils_2.2.5-0.3_s390x.deb ... 598s Unpacking libpaper-utils (2.2.5-0.3) ... 598s Selecting previously unselected package libpcre2-16-0:s390x. 598s Preparing to unpack .../095-libpcre2-16-0_10.45-1_s390x.deb ... 598s Unpacking libpcre2-16-0:s390x (10.45-1) ... 598s Selecting previously unselected package libpcre2-32-0:s390x. 598s Preparing to unpack .../096-libpcre2-32-0_10.45-1_s390x.deb ... 598s Unpacking libpcre2-32-0:s390x (10.45-1) ... 598s Selecting previously unselected package libpcre2-posix3:s390x. 598s Preparing to unpack .../097-libpcre2-posix3_10.45-1_s390x.deb ... 598s Unpacking libpcre2-posix3:s390x (10.45-1) ... 598s Selecting previously unselected package libpcre2-dev:s390x. 598s Preparing to unpack .../098-libpcre2-dev_10.45-1_s390x.deb ... 598s Unpacking libpcre2-dev:s390x (10.45-1) ... 598s Selecting previously unselected package libpkgconf3:s390x. 598s Preparing to unpack .../099-libpkgconf3_1.8.1-4_s390x.deb ... 598s Unpacking libpkgconf3:s390x (1.8.1-4) ... 598s Selecting previously unselected package zlib1g-dev:s390x. 598s Preparing to unpack .../100-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_s390x.deb ... 598s Unpacking zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 598s Selecting previously unselected package libpng-dev:s390x. 598s Preparing to unpack .../101-libpng-dev_1.6.47-1_s390x.deb ... 598s Unpacking libpng-dev:s390x (1.6.47-1) ... 598s Selecting previously unselected package libpotrace0:s390x. 598s Preparing to unpack .../102-libpotrace0_1.16-2build1_s390x.deb ... 598s Unpacking libpotrace0:s390x (1.16-2build1) ... 598s Selecting previously unselected package libptexenc1:s390x. 598s Preparing to unpack .../103-libptexenc1_2024.20240313.70630+ds-5build2_s390x.deb ... 598s Unpacking libptexenc1:s390x (2024.20240313.70630+ds-5build2) ... 598s Selecting previously unselected package libreadline-dev:s390x. 598s Preparing to unpack .../104-libreadline-dev_8.2-6_s390x.deb ... 598s Unpacking libreadline-dev:s390x (8.2-6) ... 598s Selecting previously unselected package libsharpyuv0:s390x. 598s Preparing to unpack .../105-libsharpyuv0_1.5.0-0.1_s390x.deb ... 598s Unpacking libsharpyuv0:s390x (1.5.0-0.1) ... 598s Selecting previously unselected package libsm6:s390x. 598s Preparing to unpack .../106-libsm6_2%3a1.2.4-1_s390x.deb ... 598s Unpacking libsm6:s390x (2:1.2.4-1) ... 598s Selecting previously unselected package libsynctex2:s390x. 598s Preparing to unpack .../107-libsynctex2_2024.20240313.70630+ds-5build2_s390x.deb ... 598s Unpacking libsynctex2:s390x (2024.20240313.70630+ds-5build2) ... 598s Selecting previously unselected package libtcl8.6:s390x. 598s Preparing to unpack .../108-libtcl8.6_8.6.16+dfsg-1_s390x.deb ... 598s Unpacking libtcl8.6:s390x (8.6.16+dfsg-1) ... 598s Selecting previously unselected package libteckit0:s390x. 598s Preparing to unpack .../109-libteckit0_2.5.12+ds1-1_s390x.deb ... 598s Unpacking libteckit0:s390x (2.5.12+ds1-1) ... 598s Selecting previously unselected package libtexlua53-5:s390x. 598s Preparing to unpack .../110-libtexlua53-5_2024.20240313.70630+ds-5build2_s390x.deb ... 598s Unpacking libtexlua53-5:s390x (2024.20240313.70630+ds-5build2) ... 598s Selecting previously unselected package libjbig0:s390x. 598s Preparing to unpack .../111-libjbig0_2.1-6.1ubuntu2_s390x.deb ... 598s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ... 598s Selecting previously unselected package libwebp7:s390x. 598s Preparing to unpack .../112-libwebp7_1.5.0-0.1_s390x.deb ... 598s Unpacking libwebp7:s390x (1.5.0-0.1) ... 598s Selecting previously unselected package libtiff6:s390x. 598s Preparing to unpack .../113-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ... 598s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 598s Selecting previously unselected package libxft2:s390x. 598s Preparing to unpack .../114-libxft2_2.3.6-1build1_s390x.deb ... 598s Unpacking libxft2:s390x (2.3.6-1build1) ... 598s Selecting previously unselected package libxss1:s390x. 598s Preparing to unpack .../115-libxss1_1%3a1.2.3-1build3_s390x.deb ... 598s Unpacking libxss1:s390x (1:1.2.3-1build3) ... 598s Selecting previously unselected package libtk8.6:s390x. 598s Preparing to unpack .../116-libtk8.6_8.6.16-1_s390x.deb ... 598s Unpacking libtk8.6:s390x (8.6.16-1) ... 598s Selecting previously unselected package libxt6t64:s390x. 598s Preparing to unpack .../117-libxt6t64_1%3a1.2.1-1.2build1_s390x.deb ... 598s Unpacking libxt6t64:s390x (1:1.2.1-1.2build1) ... 598s Selecting previously unselected package libxmu6:s390x. 598s Preparing to unpack .../118-libxmu6_2%3a1.1.3-3build2_s390x.deb ... 598s Unpacking libxmu6:s390x (2:1.1.3-3build2) ... 598s Selecting previously unselected package libxpm4:s390x. 598s Preparing to unpack .../119-libxpm4_1%3a3.5.17-1build2_s390x.deb ... 598s Unpacking libxpm4:s390x (1:3.5.17-1build2) ... 598s Selecting previously unselected package libxaw7:s390x. 598s Preparing to unpack .../120-libxaw7_2%3a1.0.16-1_s390x.deb ... 598s Unpacking libxaw7:s390x (2:1.0.16-1) ... 598s Selecting previously unselected package libxi6:s390x. 598s Preparing to unpack .../121-libxi6_2%3a1.8.2-1_s390x.deb ... 598s Unpacking libxi6:s390x (2:1.8.2-1) ... 598s Selecting previously unselected package libzzip-0-13t64:s390x. 598s Preparing to unpack .../122-libzzip-0-13t64_0.13.78+dfsg.1-0.1_s390x.deb ... 598s Unpacking libzzip-0-13t64:s390x (0.13.78+dfsg.1-0.1) ... 598s Selecting previously unselected package zip. 598s Preparing to unpack .../123-zip_3.0-14ubuntu2_s390x.deb ... 598s Unpacking zip (3.0-14ubuntu2) ... 598s Selecting previously unselected package unzip. 598s Preparing to unpack .../124-unzip_6.0-28ubuntu6_s390x.deb ... 598s Unpacking unzip (6.0-28ubuntu6) ... 598s Selecting previously unselected package xdg-utils. 598s Preparing to unpack .../125-xdg-utils_1.2.1-2ubuntu1_all.deb ... 598s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 598s Selecting previously unselected package r-base-core. 598s Preparing to unpack .../126-r-base-core_4.4.3-1_s390x.deb ... 598s Unpacking r-base-core (4.4.3-1) ... 599s Selecting previously unselected package r-cran-littler. 599s Preparing to unpack .../127-r-cran-littler_0.3.20-2_s390x.deb ... 599s Unpacking r-cran-littler (0.3.20-2) ... 599s Selecting previously unselected package littler. 599s Preparing to unpack .../128-littler_0.3.20-2_all.deb ... 599s Unpacking littler (0.3.20-2) ... 599s Selecting previously unselected package node-bootstrap-sass. 599s Preparing to unpack .../129-node-bootstrap-sass_3.4.3-2_all.deb ... 599s Unpacking node-bootstrap-sass (3.4.3-2) ... 599s Selecting previously unselected package node-html5shiv. 599s Preparing to unpack .../130-node-html5shiv_3.7.3+dfsg-5_all.deb ... 599s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 599s Selecting previously unselected package node-normalize.css. 599s Preparing to unpack .../131-node-normalize.css_8.0.1-5_all.deb ... 599s Unpacking node-normalize.css (8.0.1-5) ... 599s Selecting previously unselected package pandoc-data. 599s Preparing to unpack .../132-pandoc-data_3.1.11.1-3build1_all.deb ... 599s Unpacking pandoc-data (3.1.11.1-3build1) ... 599s Selecting previously unselected package pandoc. 599s Preparing to unpack .../133-pandoc_3.1.11.1+ds-2_s390x.deb ... 599s Unpacking pandoc (3.1.11.1+ds-2) ... 600s Selecting previously unselected package liblzma-dev:s390x. 600s Preparing to unpack .../134-liblzma-dev_5.6.4-1_s390x.deb ... 600s Unpacking liblzma-dev:s390x (5.6.4-1) ... 600s Selecting previously unselected package pkgconf-bin. 600s Preparing to unpack .../135-pkgconf-bin_1.8.1-4_s390x.deb ... 600s Unpacking pkgconf-bin (1.8.1-4) ... 600s Selecting previously unselected package pkgconf:s390x. 600s Preparing to unpack .../136-pkgconf_1.8.1-4_s390x.deb ... 600s Unpacking pkgconf:s390x (1.8.1-4) ... 600s Selecting previously unselected package libtirpc-dev:s390x. 600s Preparing to unpack .../137-libtirpc-dev_1.3.4+ds-1.3_s390x.deb ... 600s Unpacking libtirpc-dev:s390x (1.3.4+ds-1.3) ... 600s Selecting previously unselected package r-base-dev. 600s Preparing to unpack .../138-r-base-dev_4.4.3-1_all.deb ... 600s Unpacking r-base-dev (4.4.3-1) ... 600s Selecting previously unselected package pkg-r-autopkgtest. 600s Preparing to unpack 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(1.2.3-1) ... 600s Selecting previously unselected package r-cran-bit. 600s Preparing to unpack .../145-r-cran-bit_4.6.0+dfsg-1_s390x.deb ... 600s Unpacking r-cran-bit (4.6.0+dfsg-1) ... 600s Selecting previously unselected package r-cran-bit64. 600s Preparing to unpack .../146-r-cran-bit64_4.6.0-1-1ubuntu2_s390x.deb ... 600s Unpacking r-cran-bit64 (4.6.0-1-1ubuntu2) ... 600s Selecting previously unselected package r-cran-rlang. 600s Preparing to unpack .../147-r-cran-rlang_1.1.5-1_s390x.deb ... 600s Unpacking r-cran-rlang (1.1.5-1) ... 600s Selecting previously unselected package r-cran-cli. 600s Preparing to unpack .../148-r-cran-cli_3.6.4-1_s390x.deb ... 600s Unpacking r-cran-cli (3.6.4-1) ... 600s Selecting previously unselected package r-cran-glue. 600s Preparing to unpack .../149-r-cran-glue_1.8.0-1_s390x.deb ... 600s Unpacking r-cran-glue (1.8.0-1) ... 600s Selecting previously unselected package r-cran-lifecycle. 600s Preparing to unpack .../150-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 600s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 600s Selecting previously unselected package r-cran-vctrs. 600s Preparing to unpack .../151-r-cran-vctrs_0.6.5-1_s390x.deb ... 600s Unpacking r-cran-vctrs (0.6.5-1) ... 600s Selecting previously unselected package r-cran-blob. 600s Preparing to unpack .../152-r-cran-blob_1.2.4-1_all.deb ... 600s Unpacking r-cran-blob (1.2.4-1) ... 600s Selecting previously unselected package r-cran-fastmap. 600s Preparing to unpack .../153-r-cran-fastmap_1.2.0-1_s390x.deb ... 600s Unpacking r-cran-fastmap (1.2.0-1) ... 600s Selecting previously unselected package r-cran-cachem. 600s Preparing to unpack .../154-r-cran-cachem_1.1.0-1_s390x.deb ... 600s Unpacking r-cran-cachem (1.1.0-1) ... 600s Selecting previously unselected package r-cran-memoise. 600s Preparing to unpack .../155-r-cran-memoise_2.0.1-1_all.deb ... 600s Unpacking r-cran-memoise (2.0.1-1) ... 600s Selecting previously unselected package r-cran-pkgconfig. 600s Preparing to unpack .../156-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 600s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 600s Selecting previously unselected package r-cran-plogr. 600s Preparing to unpack .../157-r-cran-plogr_0.2.0-3build1_all.deb ... 600s Unpacking r-cran-plogr (0.2.0-3build1) ... 600s Selecting previously unselected package r-cran-cpp11. 600s Preparing to unpack .../158-r-cran-cpp11_0.5.2-1_all.deb ... 600s Unpacking r-cran-cpp11 (0.5.2-1) ... 600s Selecting previously unselected package r-cran-rsqlite. 600s Preparing to unpack .../159-r-cran-rsqlite_2.3.9-1_s390x.deb ... 600s Unpacking r-cran-rsqlite (2.3.9-1) ... 600s Selecting previously unselected package r-cran-curl. 600s Preparing to unpack .../160-r-cran-curl_6.2.1+dfsg-1ubuntu1_s390x.deb ... 600s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 600s Selecting previously unselected package r-cran-jsonlite. 600s Preparing to unpack .../161-r-cran-jsonlite_1.9.1+dfsg-1_s390x.deb ... 600s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 600s Selecting previously unselected package r-cran-mime. 600s Preparing to unpack .../162-r-cran-mime_0.12-2_s390x.deb ... 600s Unpacking r-cran-mime (0.12-2) ... 600s Selecting previously unselected package r-cran-sys. 600s Preparing to unpack .../163-r-cran-sys_3.4.3-1_s390x.deb ... 600s Unpacking r-cran-sys (3.4.3-1) ... 600s Selecting previously unselected package r-cran-askpass. 600s Preparing to unpack .../164-r-cran-askpass_1.2.1-1_s390x.deb ... 600s Unpacking r-cran-askpass (1.2.1-1) ... 600s Selecting previously unselected package r-cran-openssl. 600s Preparing to unpack .../165-r-cran-openssl_2.3.2+dfsg-1_s390x.deb ... 600s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 601s Selecting previously unselected package r-cran-r6. 601s Preparing to unpack .../166-r-cran-r6_2.6.1-1_all.deb ... 601s Unpacking r-cran-r6 (2.6.1-1) ... 601s Selecting previously unselected package r-cran-httr. 601s Preparing to unpack .../167-r-cran-httr_1.4.7+dfsg-1_all.deb ... 601s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 601s Selecting previously unselected package r-cran-png. 601s Preparing to unpack .../168-r-cran-png_0.1-8-1build2_s390x.deb ... 601s Unpacking r-cran-png (0.1-8-1build2) ... 601s Selecting previously unselected package r-bioc-zlibbioc. 601s Preparing to unpack .../169-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 601s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 601s Selecting previously unselected package r-bioc-xvector. 601s Preparing to unpack .../170-r-bioc-xvector_0.46.0-2_s390x.deb ... 601s Unpacking r-bioc-xvector (0.46.0-2) ... 601s Selecting previously unselected package r-bioc-ucsc.utils. 601s Preparing to unpack .../171-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 601s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 601s Selecting previously unselected package r-bioc-genomeinfodbdata. 601s Preparing to unpack .../172-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 601s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 601s Selecting previously unselected package r-bioc-genomeinfodb. 601s Preparing to unpack .../173-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 601s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 601s Selecting previously unselected package r-cran-crayon. 601s Preparing to unpack .../174-r-cran-crayon_1.5.3-1_all.deb ... 601s Unpacking r-cran-crayon (1.5.3-1) ... 601s Selecting previously unselected package r-bioc-biostrings. 601s Preparing to unpack .../175-r-bioc-biostrings_2.74.1+dfsg-2_s390x.deb ... 601s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 601s Selecting previously unselected package r-bioc-keggrest. 601s Preparing to unpack .../176-r-bioc-keggrest_1.46.0+dfsg-2_all.deb ... 601s Unpacking r-bioc-keggrest (1.46.0+dfsg-2) ... 601s Selecting previously unselected package r-bioc-annotationdbi. 601s Preparing to unpack .../177-r-bioc-annotationdbi_1.68.0-2_all.deb ... 601s Unpacking r-bioc-annotationdbi (1.68.0-2) ... 601s Selecting previously unselected package r-bioc-biocio. 601s Preparing to unpack .../178-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 601s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 601s Selecting previously unselected package r-cran-formatr. 601s Preparing to unpack .../179-r-cran-formatr_1.14-2_all.deb ... 601s Unpacking r-cran-formatr (1.14-2) ... 601s Selecting previously unselected package r-cran-lambda.r. 601s Preparing to unpack .../180-r-cran-lambda.r_1.2.4-2build1_all.deb ... 601s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 601s Selecting previously unselected package r-cran-futile.options. 601s Preparing to unpack .../181-r-cran-futile.options_1.0.1-3build1_all.deb ... 601s Unpacking r-cran-futile.options (1.0.1-3build1) ... 601s Selecting previously unselected package r-cran-futile.logger. 601s Preparing to unpack .../182-r-cran-futile.logger_1.4.3-4build1_all.deb ... 601s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 601s Selecting previously unselected package r-cran-snow. 601s Preparing to unpack .../183-r-cran-snow_1%3a0.4.4-2_all.deb ... 601s Unpacking r-cran-snow (1:0.4.4-2) ... 601s Selecting previously unselected package r-cran-codetools. 601s Preparing to unpack .../184-r-cran-codetools_0.2-20-1_all.deb ... 601s Unpacking r-cran-codetools (0.2-20-1) ... 601s Selecting previously unselected package r-cran-bh. 601s Preparing to unpack .../185-r-cran-bh_1.84.0-1_all.deb ... 601s Unpacking r-cran-bh (1.84.0-1) ... 601s Selecting previously unselected package r-bioc-biocparallel. 601s Preparing to unpack .../186-r-bioc-biocparallel_1.40.0-2_s390x.deb ... 601s Unpacking r-bioc-biocparallel (1.40.0-2) ... 601s Selecting previously unselected package r-cran-base64enc. 601s Preparing to unpack .../187-r-cran-base64enc_0.1-3-3_s390x.deb ... 601s Unpacking r-cran-base64enc (0.1-3-3) ... 601s Selecting previously unselected package r-cran-digest. 601s Preparing to unpack .../188-r-cran-digest_0.6.37-1_s390x.deb ... 601s Unpacking r-cran-digest (0.6.37-1) ... 601s Selecting previously unselected package r-cran-htmltools. 601s Preparing to unpack .../189-r-cran-htmltools_0.5.8.1-1_s390x.deb ... 601s Unpacking r-cran-htmltools (0.5.8.1-1) ... 601s Selecting previously unselected package r-cran-evaluate. 601s Preparing to unpack .../190-r-cran-evaluate_1.0.3-1_all.deb ... 601s Unpacking r-cran-evaluate (1.0.3-1) ... 601s Selecting previously unselected package r-cran-xfun. 601s Preparing to unpack .../191-r-cran-xfun_0.51+dfsg-1_s390x.deb ... 601s Unpacking r-cran-xfun (0.51+dfsg-1) ... 601s Selecting previously unselected package r-cran-highr. 601s Preparing to unpack .../192-r-cran-highr_0.11+dfsg-1_all.deb ... 601s Unpacking r-cran-highr (0.11+dfsg-1) ... 601s Selecting previously unselected package r-cran-yaml. 601s Preparing to unpack .../193-r-cran-yaml_2.3.10-1_s390x.deb ... 601s Unpacking r-cran-yaml (2.3.10-1) ... 601s Selecting previously unselected package libjs-mathjax. 601s Preparing to unpack .../194-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 601s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 602s Selecting previously unselected package r-cran-knitr. 602s Preparing to unpack .../195-r-cran-knitr_1.49+dfsg-1_all.deb ... 602s Unpacking r-cran-knitr (1.49+dfsg-1) ... 602s Selecting previously unselected package r-cran-jquerylib. 602s Preparing to unpack .../196-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 602s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 602s Selecting previously unselected package r-cran-fs. 602s Preparing to unpack .../197-r-cran-fs_1.6.5+dfsg-1_s390x.deb ... 602s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 602s Selecting previously unselected package r-cran-rappdirs. 602s Preparing to unpack .../198-r-cran-rappdirs_0.3.3-1_s390x.deb ... 602s Unpacking r-cran-rappdirs (0.3.3-1) ... 602s Selecting previously unselected package r-cran-sass. 602s Preparing to unpack .../199-r-cran-sass_0.4.9+dfsg-1_s390x.deb ... 602s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 602s Selecting previously unselected package r-cran-bslib. 602s Preparing to unpack .../200-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 602s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 602s Selecting previously unselected package r-cran-fontawesome. 602s Preparing to unpack .../201-r-cran-fontawesome_0.5.3-1_all.deb ... 602s Unpacking r-cran-fontawesome (0.5.3-1) ... 602s Selecting previously unselected package r-cran-tinytex. 602s Preparing to unpack .../202-r-cran-tinytex_0.56-1_all.deb ... 602s Unpacking r-cran-tinytex (0.56-1) ... 602s Selecting previously unselected package libjs-modernizr. 602s Preparing to unpack .../203-libjs-modernizr_3.13.0-0.1_all.deb ... 602s Unpacking libjs-modernizr (3.13.0-0.1) ... 602s Selecting previously unselected package r-cran-pkgkitten. 602s Preparing to unpack .../204-r-cran-pkgkitten_0.2.4-1_all.deb ... 602s Unpacking r-cran-pkgkitten (0.2.4-1) ... 602s Selecting previously unselected package r-cran-rcpp. 602s Preparing to unpack .../205-r-cran-rcpp_1.0.14-1_s390x.deb ... 602s Unpacking r-cran-rcpp (1.0.14-1) ... 602s Selecting previously unselected package r-cran-later. 602s Preparing to unpack .../206-r-cran-later_1.4.1+dfsg-1_s390x.deb ... 602s Unpacking r-cran-later (1.4.1+dfsg-1) ... 602s Selecting previously unselected package r-cran-magrittr. 602s Preparing to unpack .../207-r-cran-magrittr_2.0.3-1_s390x.deb ... 602s Unpacking r-cran-magrittr (2.0.3-1) ... 602s Selecting previously unselected package r-cran-promises. 602s Preparing to unpack .../208-r-cran-promises_1.3.2+dfsg-1_s390x.deb ... 602s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 602s Selecting previously unselected package r-cran-httpuv. 602s Preparing to unpack .../209-r-cran-httpuv_1.6.15+dfsg-1_s390x.deb ... 602s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 602s Selecting previously unselected package r-cran-xtable. 602s Preparing to unpack .../210-r-cran-xtable_1%3a1.8-4-2_all.deb ... 602s Unpacking r-cran-xtable (1:1.8-4-2) ... 602s Selecting previously unselected package r-cran-sourcetools. 602s Preparing to unpack .../211-r-cran-sourcetools_0.1.7-1-1_s390x.deb ... 602s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 602s Selecting previously unselected package r-cran-withr. 602s Preparing to unpack .../212-r-cran-withr_3.0.2+dfsg-1_all.deb ... 602s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 602s Selecting previously unselected package r-cran-commonmark. 602s Preparing to unpack .../213-r-cran-commonmark_1.9.2-2_s390x.deb ... 602s Unpacking r-cran-commonmark (1.9.2-2) ... 602s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 602s Preparing to unpack .../214-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 602s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 602s Selecting previously unselected package r-cran-shiny. 602s Preparing to unpack .../215-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 602s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 602s Selecting previously unselected package r-cran-rmarkdown. 602s Preparing to unpack .../216-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 602s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 602s Selecting previously unselected package r-cran-bookdown. 602s Preparing to unpack .../217-r-cran-bookdown_0.42+dfsg-1_all.deb ... 602s Unpacking r-cran-bookdown (0.42+dfsg-1) ... 602s Selecting previously unselected package r-cran-biocmanager. 602s Preparing to unpack .../218-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 602s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 602s Selecting previously unselected package tex-common. 602s Preparing to unpack .../219-tex-common_6.19_all.deb ... 602s Unpacking tex-common (6.19) ... 602s Selecting previously unselected package t1utils. 602s Preparing to unpack .../220-t1utils_1.41-4build3_s390x.deb ... 602s Unpacking t1utils (1.41-4build3) ... 602s Selecting previously unselected package texlive-binaries. 602s Preparing to unpack .../221-texlive-binaries_2024.20240313.70630+ds-5build2_s390x.deb ... 602s Unpacking texlive-binaries (2024.20240313.70630+ds-5build2) ... 602s Selecting previously unselected package texlive-base. 602s Preparing to unpack .../222-texlive-base_2024.20250114-1_all.deb ... 602s Unpacking texlive-base (2024.20250114-1) ... 603s Selecting previously unselected package texlive-latex-base. 603s Preparing to unpack .../223-texlive-latex-base_2024.20250114-1_all.deb ... 603s Unpacking texlive-latex-base (2024.20250114-1) ... 604s Selecting previously unselected package texlive-bibtex-extra. 604s Preparing to unpack .../224-texlive-bibtex-extra_2024.20250114-1_all.deb ... 604s Unpacking texlive-bibtex-extra (2024.20250114-1) ... 606s Selecting previously unselected package r-bioc-biocversion. 606s Preparing to unpack .../225-r-bioc-biocversion_3.20.0-2_all.deb ... 606s Unpacking r-bioc-biocversion (3.20.0-2) ... 606s Selecting previously unselected package r-bioc-biocstyle. 606s Preparing to unpack .../226-r-bioc-biocstyle_2.34.0+dfsg-1_all.deb ... 606s Unpacking r-bioc-biocstyle (2.34.0+dfsg-1) ... 606s Selecting previously unselected package r-cran-lattice. 606s Preparing to unpack .../227-r-cran-lattice_0.22-6-1_s390x.deb ... 606s Unpacking r-cran-lattice (0.22-6-1) ... 606s Selecting previously unselected package r-cran-matrix. 606s Preparing to unpack .../228-r-cran-matrix_1.7-3-1_s390x.deb ... 606s Unpacking r-cran-matrix (1.7-3-1) ... 606s Selecting previously unselected package r-cran-matrixstats. 606s Preparing to unpack .../229-r-cran-matrixstats_1.5.0-1_s390x.deb ... 606s Unpacking r-cran-matrixstats (1.5.0-1) ... 606s Selecting previously unselected package r-bioc-matrixgenerics. 606s Preparing to unpack .../230-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 606s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 606s Selecting previously unselected package r-cran-abind. 606s Preparing to unpack .../231-r-cran-abind_1.4-8-1_all.deb ... 606s Unpacking r-cran-abind (1.4-8-1) ... 607s Selecting previously unselected package r-bioc-s4arrays. 607s Preparing to unpack .../232-r-bioc-s4arrays_1.6.0+dfsg-2_s390x.deb ... 607s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 607s Selecting previously unselected package r-bioc-sparsearray. 607s Preparing to unpack .../233-r-bioc-sparsearray_1.6.2+dfsg-1_s390x.deb ... 607s Unpacking r-bioc-sparsearray (1.6.2+dfsg-1) ... 607s Selecting previously unselected package r-bioc-delayedarray. 607s Preparing to unpack .../234-r-bioc-delayedarray_0.32.0+dfsg-2_s390x.deb ... 607s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 607s Selecting previously unselected package r-bioc-genomicranges. 607s Preparing to unpack .../235-r-bioc-genomicranges_1.58.0+dfsg-2_s390x.deb ... 607s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 607s Selecting previously unselected package r-bioc-summarizedexperiment. 607s Preparing to unpack .../236-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 607s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 607s Selecting previously unselected package r-cran-bitops. 607s Preparing to unpack .../237-r-cran-bitops_1.0-9-1_s390x.deb ... 607s Unpacking r-cran-bitops (1.0-9-1) ... 607s Selecting previously unselected package r-bioc-rhtslib. 607s Preparing to unpack .../238-r-bioc-rhtslib_3.2.0+dfsg-2_s390x.deb ... 607s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 607s Selecting previously unselected package r-bioc-rsamtools. 607s Preparing to unpack .../239-r-bioc-rsamtools_2.22.0+dfsg-2_s390x.deb ... 607s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 607s Selecting previously unselected package r-bioc-genomicalignments. 607s Preparing to unpack .../240-r-bioc-genomicalignments_1.42.0-2_s390x.deb ... 607s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 607s Selecting previously unselected package r-cran-xml. 607s Preparing to unpack .../241-r-cran-xml_3.99-0.18-1_s390x.deb ... 607s Unpacking r-cran-xml (3.99-0.18-1) ... 607s Selecting previously unselected package r-cran-rcurl. 607s Preparing to unpack .../242-r-cran-rcurl_1.98-1.16+dfsg-1_s390x.deb ... 607s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 607s Selecting previously unselected package r-cran-rjson. 607s Preparing to unpack .../243-r-cran-rjson_0.2.23-1_s390x.deb ... 607s Unpacking r-cran-rjson (0.2.23-1) ... 607s Selecting previously unselected package r-cran-restfulr. 607s Preparing to unpack .../244-r-cran-restfulr_0.0.15-1_s390x.deb ... 607s Unpacking r-cran-restfulr (0.0.15-1) ... 607s Selecting previously unselected package r-bioc-rtracklayer. 607s Preparing to unpack .../245-r-bioc-rtracklayer_1.66.0-2_s390x.deb ... 607s Unpacking r-bioc-rtracklayer (1.66.0-2) ... 607s Selecting previously unselected package r-bioc-genomicfeatures. 607s Preparing to unpack .../246-r-bioc-genomicfeatures_1.58.0+dfsg-2_all.deb ... 607s Unpacking r-bioc-genomicfeatures (1.58.0+dfsg-2) ... 607s Selecting previously unselected package r-cran-runit. 607s Preparing to unpack .../247-r-cran-runit_0.4.33-1_all.deb ... 607s Unpacking r-cran-runit (0.4.33-1) ... 607s Setting up libjs-json 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file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 611s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 611s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 611s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 611s Setting up texlive-bibtex-extra (2024.20250114-1) ... 611s Setting up r-cran-httr (1.4.7+dfsg-1) ... 611s Setting up r-cran-memoise (2.0.1-1) ... 611s Setting up r-cran-promises (1.3.2+dfsg-1) ... 611s Setting up r-cran-blob (1.2.4-1) ... 611s Setting up r-bioc-xvector (0.46.0-2) ... 611s Setting up r-cran-rsqlite (2.3.9-1) ... 611s Setting up r-base-dev (4.4.3-1) ... 611s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 611s Setting up r-bioc-sparsearray (1.6.2+dfsg-1) ... 611s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 611s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 611s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 611s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 611s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 611s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 611s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 611s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 611s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 611s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 611s Setting up r-cran-bookdown (0.42+dfsg-1) ... 611s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 611s Setting up r-bioc-keggrest (1.46.0+dfsg-2) ... 611s Setting up r-bioc-annotationdbi (1.68.0-2) ... 611s Setting up r-bioc-biocstyle (2.34.0+dfsg-1) ... 611s Setting up r-bioc-genomicalignments (1.42.0-2) ... 611s Setting up r-bioc-rtracklayer (1.66.0-2) ... 611s Setting up r-bioc-genomicfeatures (1.58.0+dfsg-2) ... 611s Processing triggers for man-db (2.13.0-1) ... 612s Processing triggers for install-info (7.1.1-1) ... 612s Processing triggers for libc-bin (2.41-1ubuntu2) ... 612s Processing triggers for tex-common (6.19) ... 612s Running updmap-sys. This may take some time... done. 612s Running mktexlsr /var/lib/texmf ... done. 612s Building format(s) --all. 651s This may take some time... done. 652s autopkgtest [17:55:34]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 652s autopkgtest [17:55:34]: test pkg-r-autopkgtest: [----------------------- 653s Test: Try to load the R library IRanges 653s 653s R version 4.4.3 (2025-02-28) -- "Trophy Case" 653s Copyright (C) 2025 The R Foundation for Statistical Computing 653s Platform: s390x-ibm-linux-gnu 653s 653s R is free software and comes with ABSOLUTELY NO WARRANTY. 653s You are welcome to redistribute it under certain conditions. 653s Type 'license()' or 'licence()' for distribution details. 653s 653s R is a collaborative project with many contributors. 653s Type 'contributors()' for more information and 653s 'citation()' on how to cite R or R packages in publications. 653s 653s Type 'demo()' for some demos, 'help()' for on-line help, or 653s 'help.start()' for an HTML browser interface to help. 653s Type 'q()' to quit R. 653s 653s > library('IRanges') 653s Loading required package: BiocGenerics 653s 653s Attaching package: ‘BiocGenerics’ 653s 653s The following objects are masked from ‘package:stats’: 653s 653s IQR, mad, sd, var, xtabs 653s 653s The following objects are masked from ‘package:base’: 653s 653s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 653s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 653s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 653s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 653s Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff, 653s table, tapply, union, unique, unsplit, which.max, which.min 653s 653s Loading required package: S4Vectors 653s Loading required package: stats4 653s 653s Attaching package: ‘S4Vectors’ 653s 653s The following object is masked from ‘package:utils’: 653s 653s findMatches 653s 653s The following objects are masked from ‘package:base’: 653s 653s expand.grid, I, unname 653s 654s > 654s > 654s Other tests are currently unsupported! 654s They will be progressively added. 654s autopkgtest [17:55:36]: test pkg-r-autopkgtest: -----------------------] 655s pkg-r-autopkgtest PASS 655s autopkgtest [17:55:37]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 655s autopkgtest [17:55:37]: @@@@@@@@@@@@@@@@@@@@ summary 655s pkg-r-autopkgtest PASS 661s nova [W] Using flock in prodstack6-s390x 661s flock: timeout while waiting to get lock 661s Creating nova instance adt-plucky-s390x-r-bioc-iranges-20250315-174442-juju-7f2275-prod-proposed-migration-environment-2-8da4c0cb-56e5-4287-9b04-85406fa188ab from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)... 661s nova [W] Timed out waiting for 85042954-0622-416f-9488-e5471d93bf90 to get deleted.