0s autopkgtest [17:44:06]: starting date and time: 2025-03-15 17:44:06+0000 0s autopkgtest [17:44:06]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [17:44:06]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.ncs1nli5/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-bioc-hdf5array --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-s390x-11.secgroup --name adt-plucky-s390x-r-bioc-hdf5array-20250315-174406-juju-7f2275-prod-proposed-migration-environment-2-8763a685-9dd4-4edb-84db-b21490440012 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 148s autopkgtest [17:46:34]: testbed dpkg architecture: s390x 148s autopkgtest [17:46:34]: testbed apt version: 2.9.33 148s autopkgtest [17:46:34]: @@@@@@@@@@@@@@@@@@@@ test bed setup 148s autopkgtest [17:46:34]: testbed release detected to be: None 149s autopkgtest [17:46:35]: updating testbed package index (apt update) 149s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 150s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 150s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 150s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 150s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 150s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 150s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 150s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [113 kB] 150s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1824 B] 150s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B] 150s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [320 kB] 151s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [13.4 kB] 151s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3776 B] 151s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [240 B] 151s Fetched 1073 kB in 1s (731 kB/s) 152s Reading package lists... 152s Reading package lists... 152s Building dependency tree... 152s Reading state information... 152s Calculating upgrade... 152s Calculating upgrade... 152s The following packages were automatically installed and are no longer required: 152s libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 152s linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic 152s linux-modules-6.11.0-8-generic linux-tools-6.11.0-8 152s linux-tools-6.11.0-8-generic 152s Use 'sudo apt autoremove' to remove them. 152s The following packages will be upgraded: 152s pinentry-curses python3-jinja2 strace 153s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 153s Need to get 652 kB of archives. 153s After this operation, 27.6 kB of additional disk space will be used. 153s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB] 153s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x pinentry-curses s390x 1.3.1-2ubuntu3 [42.9 kB] 153s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 154s Fetched 652 kB in 1s (740 kB/s) 154s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81428 files and directories currently installed.) 154s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ... 154s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 154s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_s390x.deb ... 154s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 154s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 154s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 154s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 154s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 154s Setting up strace (6.13+ds-1ubuntu1) ... 154s Processing triggers for man-db (2.13.0-1) ... 155s Reading package lists... 155s Building dependency tree... 155s Reading state information... 155s Solving dependencies... 155s The following packages will be REMOVED: 155s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 155s linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 155s linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8* 155s linux-tools-6.11.0-8-generic* 155s 0 upgraded, 0 newly installed, 9 to remove and 5 not upgraded. 155s After this operation, 167 MB disk space will be freed. 155s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81428 files and directories currently installed.) 155s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 155s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 155s Removing libpython3.12t64:s390x (3.12.9-1) ... 155s Removing libpython3.12-stdlib:s390x (3.12.9-1) ... 155s Removing libnsl2:s390x (1.3.0-3build3) ... 155s Removing libpython3.12-minimal:s390x (3.12.9-1) ... 155s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 155s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 156s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 156s Processing triggers for libc-bin (2.41-1ubuntu1) ... 156s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56328 files and directories currently installed.) 156s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ... 156s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 156s autopkgtest [17:46:42]: upgrading testbed (apt dist-upgrade and autopurge) 157s Reading package lists... 157s Building dependency tree... 157s Reading state information... 157s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 157s Starting 2 pkgProblemResolver with broken count: 0 157s Done 157s Entering ResolveByKeep 157s 157s Calculating upgrade... 157s The following packages will be upgraded: 157s libc-bin libc-dev-bin libc6 libc6-dev locales 157s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 157s Need to get 9512 kB of archives. 157s After this operation, 8192 B of additional disk space will be used. 157s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6-dev s390x 2.41-1ubuntu2 [1678 kB] 159s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-dev-bin s390x 2.41-1ubuntu2 [24.3 kB] 159s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6 s390x 2.41-1ubuntu2 [2892 kB] 161s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-bin s390x 2.41-1ubuntu2 [671 kB] 162s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x locales all 2.41-1ubuntu2 [4246 kB] 165s Preconfiguring packages ... 165s Fetched 9512 kB in 7s (1306 kB/s) 165s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 165s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_s390x.deb ... 165s Unpacking libc6-dev:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 165s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_s390x.deb ... 165s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 165s Preparing to unpack .../libc6_2.41-1ubuntu2_s390x.deb ... 165s Unpacking libc6:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 165s Setting up libc6:s390x (2.41-1ubuntu2) ... 165s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 165s Preparing to unpack .../libc-bin_2.41-1ubuntu2_s390x.deb ... 165s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 165s Setting up libc-bin (2.41-1ubuntu2) ... 165s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 165s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 165s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 165s Setting up locales (2.41-1ubuntu2) ... 166s Generating locales (this might take a while)... 167s en_US.UTF-8... done 167s Generation complete. 167s Setting up libc-dev-bin (2.41-1ubuntu2) ... 167s Setting up libc6-dev:s390x (2.41-1ubuntu2) ... 167s Processing triggers for man-db (2.13.0-1) ... 167s Processing triggers for systemd (257.3-1ubuntu3) ... 168s Reading package lists... 168s Building dependency tree... 168s Reading state information... 168s Starting pkgProblemResolver with broken count: 0 168s Starting 2 pkgProblemResolver with broken count: 0 168s Done 169s Solving dependencies... 169s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 169s autopkgtest [17:46:55]: rebooting testbed after setup commands that affected boot 188s autopkgtest [17:47:14]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP Wed Mar 12 14:53:49 UTC 2025 190s autopkgtest [17:47:16]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-hdf5array 199s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-hdf5array 1.34.0-2build1 (dsc) [2379 B] 199s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-hdf5array 1.34.0-2build1 (tar) [8107 kB] 199s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-hdf5array 1.34.0-2build1 (diff) [6648 B] 199s gpgv: Signature made Tue Jan 28 09:40:27 2025 UTC 199s gpgv: using RSA key 25E3FF2D7F469DBE7D0D4E50AFCFEC8E669CE1C2 199s gpgv: Can't check signature: No public key 199s dpkg-source: warning: cannot verify inline signature for ./r-bioc-hdf5array_1.34.0-2build1.dsc: no acceptable signature found 199s autopkgtest [17:47:25]: testing package r-bioc-hdf5array version 1.34.0-2build1 200s autopkgtest [17:47:26]: build not needed 202s autopkgtest [17:47:28]: test pkg-r-autopkgtest: preparing testbed 202s Reading package lists... 202s Building dependency tree... 202s Reading state information... 202s Starting pkgProblemResolver with broken count: 0 202s Starting 2 pkgProblemResolver with broken count: 0 202s Done 203s The following NEW packages will be installed: 203s build-essential comerr-dev cpp cpp-14 cpp-14-s390x-linux-gnu 203s cpp-s390x-linux-gnu dctrl-tools fontconfig fontconfig-config 203s fonts-dejavu-core fonts-dejavu-mono g++ g++-14 g++-14-s390x-linux-gnu 203s g++-s390x-linux-gnu gcc gcc-14 gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu 203s gfortran gfortran-14 gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu 203s hdf5-helpers icu-devtools krb5-multidev libaec-dev libaec0 libasan8 203s libblas-dev libblas3 libblosc1 libboost-dev libboost1.83-dev libbrotli-dev 203s libbz2-dev libcairo2 libcc1-0 libcurl4-openssl-dev libdatrie1 libdeflate-dev 203s libdeflate0 libevent-2.1-7t64 libfontconfig1 libfreetype6 libgcc-14-dev 203s libgfortran-14-dev libgfortran5 libgmp-dev libgmpxx4ldbl libgnutls-dane0t64 203s libgnutls-openssl27t64 libgnutls28-dev libgomp1 libgraphite2-3 libgssrpc4t64 203s libharfbuzz0b libhdf5-310 libhdf5-cpp-310 libhdf5-dev libhdf5-fortran-310 203s libhdf5-hl-310 libhdf5-hl-cpp-310 libhdf5-hl-fortran-310 libice6 libicu-dev 203s libidn2-dev libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8 203s libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libkadm5clnt-mit12 203s libkadm5srv-mit12 libkdb5-10t64 libkrb5-dev liblapack-dev liblapack3 203s libldap-dev liblzma-dev libmpc3 libncurses-dev libnghttp2-dev libp11-kit-dev 203s libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils 203s libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 203s libpixman-1-0 libpkgconf3 libpng-dev libpsl-dev libreadline-dev librtmp-dev 203s libsharpyuv0 libsm6 libsnappy1v5 libssh2-1-dev libssl-dev libstdc++-14-dev 203s libsz2 libtasn1-6-dev libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-dev 203s libtk8.6 libubsan1 libunbound8 libwebp7 libxcb-render0 libxcb-shm0 libxft2 203s libxrender1 libxss1 libxt6t64 libzstd-dev littler nettle-dev 203s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev r-bioc-annotate 203s r-bioc-annotationdbi r-bioc-annotationhub r-bioc-biobase 203s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel 203s r-bioc-biocversion r-bioc-biostrings r-bioc-delayedarray 203s r-bioc-delayedmatrixstats r-bioc-experimenthub r-bioc-genefilter 203s r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments 203s r-bioc-genomicfeatures r-bioc-genomicranges r-bioc-hdf5array r-bioc-iranges 203s r-bioc-keggrest r-bioc-matrixgenerics r-bioc-rhdf5 r-bioc-rhdf5filters 203s r-bioc-rhdf5lib r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer 203s r-bioc-s4arrays r-bioc-s4vectors r-bioc-singlecellexperiment 203s r-bioc-sparsearray r-bioc-sparsematrixstats r-bioc-summarizedexperiment 203s r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass 203s r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops 203s r-cran-blob r-cran-cachem r-cran-cli r-cran-codetools r-cran-cpp11 203s r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-dplyr r-cran-fansi 203s r-cran-fastmap r-cran-filelock r-cran-formatr r-cran-futile.logger 203s r-cran-futile.options r-cran-generics r-cran-glue r-cran-httr 203s r-cran-jsonlite r-cran-lambda.r r-cran-lattice r-cran-lifecycle 203s r-cran-littler r-cran-magrittr r-cran-matrix r-cran-matrixstats 203s r-cran-memoise r-cran-mime r-cran-openssl r-cran-pillar r-cran-pkgconfig 203s r-cran-pkgkitten r-cran-plogr r-cran-png r-cran-purrr r-cran-r6 203s r-cran-rappdirs r-cran-rcpp r-cran-rcurl r-cran-restfulr r-cran-rjson 203s r-cran-rlang r-cran-rsqlite r-cran-runit r-cran-snow r-cran-stringi 203s r-cran-stringr r-cran-survival r-cran-sys r-cran-tibble r-cran-tidyr 203s r-cran-tidyselect r-cran-utf8 r-cran-vctrs r-cran-withr r-cran-xml 203s r-cran-xtable r-cran-yaml unzip x11-common xdg-utils zip zlib1g-dev 203s 0 upgraded, 242 newly installed, 0 to remove and 0 not upgraded. 203s Need to get 269 MB of archives. 203s After this operation, 772 MB of additional disk space will be used. 203s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libisl23 s390x 0.27-1 [704 kB] 203s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB] 203s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [9572 kB] 212s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14 s390x 14.2.0-17ubuntu3 [1028 B] 212s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [5556 B] 212s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x cpp s390x 4:14.2.0-1ubuntu1 [22.4 kB] 212s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libcc1-0 s390x 15-20250222-0ubuntu1 [49.2 kB] 212s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 15-20250222-0ubuntu1 [152 kB] 212s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libitm1 s390x 15-20250222-0ubuntu1 [31.2 kB] 212s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libasan8 s390x 15-20250222-0ubuntu1 [2970 kB] 214s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libubsan1 s390x 15-20250222-0ubuntu1 [1212 kB] 215s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-14-dev s390x 14.2.0-17ubuntu3 [1037 kB] 216s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [18.7 MB] 230s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14 s390x 14.2.0-17ubuntu3 [526 kB] 231s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1204 B] 231s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x gcc s390x 4:14.2.0-1ubuntu1 [5004 B] 231s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++-14-dev s390x 14.2.0-17ubuntu3 [2611 kB] 233s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [11.0 MB] 246s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14 s390x 14.2.0-17ubuntu3 [21.8 kB] 246s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x g++-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [956 B] 246s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x g++ s390x 4:14.2.0-1ubuntu1 [1080 B] 246s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x build-essential s390x 12.10ubuntu1 [4930 B] 246s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x dctrl-tools s390x 2.24-3build3 [106 kB] 246s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB] 246s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 247s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 248s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-2ubuntu1 [37.5 kB] 248s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-2ubuntu1 [150 kB] 248s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig s390x 2.15.0-2ubuntu1 [191 kB] 248s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 15-20250222-0ubuntu1 [620 kB] 249s Get:31 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran-14-dev s390x 14.2.0-17ubuntu3 [654 kB] 250s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [10.3 MB] 260s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14 s390x 14.2.0-17ubuntu3 [13.6 kB] 260s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1012 B] 260s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran s390x 4:14.2.0-1ubuntu1 [1160 B] 260s Get:36 http://ftpmaster.internal/ubuntu plucky/universe s390x hdf5-helpers s390x 1.14.5+repack-3 [17.0 kB] 260s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x icu-devtools s390x 76.1-1ubuntu2 [225 kB] 261s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x comerr-dev s390x 2.1-1.47.2-1ubuntu1 [44.7 kB] 261s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x libgssrpc4t64 s390x 1.21.3-4ubuntu2 [59.1 kB] 261s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x libkadm5clnt-mit12 s390x 1.21.3-4ubuntu2 [40.6 kB] 261s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libkdb5-10t64 s390x 1.21.3-4ubuntu2 [42.0 kB] 261s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libkadm5srv-mit12 s390x 1.21.3-4ubuntu2 [55.4 kB] 261s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x krb5-multidev s390x 1.21.3-4ubuntu2 [125 kB] 261s Get:44 http://ftpmaster.internal/ubuntu plucky/universe s390x libaec0 s390x 1.1.3-1 [25.7 kB] 261s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.1-2 [252 kB] 261s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x libblas-dev s390x 3.12.1-2 [254 kB] 261s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x libsnappy1v5 s390x 1.2.1-1 [33.0 kB] 261s Get:48 http://ftpmaster.internal/ubuntu plucky/universe s390x libblosc1 s390x 1.21.5+ds-1build1 [27.7 kB] 261s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x libboost1.83-dev s390x 1.83.0-4.1ubuntu2 [10.7 MB] 271s Get:50 http://ftpmaster.internal/ubuntu plucky/main s390x libboost-dev s390x 1.83.0.2ubuntu1 [4470 B] 271s Get:51 http://ftpmaster.internal/ubuntu plucky/main s390x libbrotli-dev s390x 1.1.0-2build4 [395 kB] 272s Get:52 http://ftpmaster.internal/ubuntu plucky/main s390x libbz2-dev s390x 1.0.8-6 [39.1 kB] 272s Get:53 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB] 272s Get:54 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB] 272s Get:55 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B] 272s Get:56 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB] 272s Get:57 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB] 273s Get:58 http://ftpmaster.internal/ubuntu plucky/main s390x libidn2-dev s390x 2.3.7-2build2 [122 kB] 273s Get:59 http://ftpmaster.internal/ubuntu plucky/main s390x libkrb5-dev s390x 1.21.3-4ubuntu2 [11.9 kB] 273s Get:60 http://ftpmaster.internal/ubuntu plucky/main s390x libldap-dev s390x 2.6.9+dfsg-1~exp2ubuntu1 [316 kB] 273s Get:61 http://ftpmaster.internal/ubuntu plucky/main s390x libpkgconf3 s390x 1.8.1-4 [31.2 kB] 273s Get:62 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf-bin s390x 1.8.1-4 [21.5 kB] 273s Get:63 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf s390x 1.8.1-4 [16.7 kB] 273s Get:64 http://ftpmaster.internal/ubuntu plucky/main s390x libnghttp2-dev s390x 1.64.0-1 [121 kB] 273s Get:65 http://ftpmaster.internal/ubuntu plucky/main s390x libpsl-dev s390x 0.21.2-1.1build1 [77.3 kB] 273s Get:66 http://ftpmaster.internal/ubuntu plucky/main s390x libgmpxx4ldbl s390x 2:6.3.0+dfsg-3ubuntu1 [10.1 kB] 273s Get:67 http://ftpmaster.internal/ubuntu plucky/main s390x libgmp-dev s390x 2:6.3.0+dfsg-3ubuntu1 [424 kB] 274s Get:68 http://ftpmaster.internal/ubuntu plucky/main s390x libevent-2.1-7t64 s390x 2.1.12-stable-10 [145 kB] 274s Get:69 http://ftpmaster.internal/ubuntu plucky/main s390x libunbound8 s390x 1.22.0-1ubuntu1 [462 kB] 274s Get:70 http://ftpmaster.internal/ubuntu plucky/main s390x libgnutls-dane0t64 s390x 3.8.9-2ubuntu2 [24.5 kB] 274s Get:71 http://ftpmaster.internal/ubuntu plucky/main s390x libgnutls-openssl27t64 s390x 3.8.9-2ubuntu2 [24.5 kB] 274s Get:72 http://ftpmaster.internal/ubuntu plucky/main s390x libp11-kit-dev s390x 0.25.5-2ubuntu3 [23.5 kB] 274s Get:73 http://ftpmaster.internal/ubuntu plucky/main s390x libtasn1-6-dev s390x 4.20.0-2 [94.8 kB] 274s Get:74 http://ftpmaster.internal/ubuntu plucky/main s390x nettle-dev s390x 3.10.1-1 [1198 kB] 276s Get:75 http://ftpmaster.internal/ubuntu plucky/main s390x libgnutls28-dev s390x 3.8.9-2ubuntu2 [1016 kB] 277s Get:76 http://ftpmaster.internal/ubuntu plucky/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB] 277s Get:77 http://ftpmaster.internal/ubuntu plucky/main s390x librtmp-dev s390x 2.4+20151223.gitfa8646d.1-2build7 [69.2 kB] 277s Get:78 http://ftpmaster.internal/ubuntu plucky/main s390x libssl-dev s390x 3.4.1-1ubuntu1 [2429 kB] 280s Get:79 http://ftpmaster.internal/ubuntu plucky/main s390x libssh2-1-dev s390x 1.11.1-1 [287 kB] 280s Get:80 http://ftpmaster.internal/ubuntu plucky/main s390x libzstd-dev s390x 1.5.6+dfsg-2 [408 kB] 280s Get:81 http://ftpmaster.internal/ubuntu plucky/main s390x libcurl4-openssl-dev s390x 8.12.1-3ubuntu1 [513 kB] 281s Get:82 http://ftpmaster.internal/ubuntu plucky/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB] 281s Get:83 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.23-1 [46.1 kB] 281s Get:84 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate-dev s390x 1.23-1 [52.2 kB] 281s Get:85 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB] 281s Get:86 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB] 281s Get:87 http://ftpmaster.internal/ubuntu plucky/universe s390x libsz2 s390x 1.1.3-1 [5442 B] 281s Get:88 http://ftpmaster.internal/ubuntu plucky/universe s390x libhdf5-310 s390x 1.14.5+repack-3 [1477 kB] 282s Get:89 http://ftpmaster.internal/ubuntu plucky/universe s390x libhdf5-cpp-310 s390x 1.14.5+repack-3 [117 kB] 282s Get:90 http://ftpmaster.internal/ubuntu plucky/universe s390x libhdf5-fortran-310 s390x 1.14.5+repack-3 [115 kB] 282s Get:91 http://ftpmaster.internal/ubuntu plucky/universe s390x libhdf5-hl-310 s390x 1.14.5+repack-3 [61.0 kB] 282s Get:92 http://ftpmaster.internal/ubuntu plucky/universe s390x libhdf5-hl-fortran-310 s390x 1.14.5+repack-3 [32.5 kB] 282s Get:93 http://ftpmaster.internal/ubuntu plucky/universe s390x libhdf5-hl-cpp-310 s390x 1.14.5+repack-3 [11.7 kB] 282s Get:94 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB] 283s Get:95 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8-dev s390x 2.1.5-3ubuntu2 [281 kB] 283s Get:96 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 283s Get:97 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B] 283s Get:98 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B] 283s Get:99 http://ftpmaster.internal/ubuntu plucky/universe s390x libaec-dev s390x 1.1.3-1 [23.3 kB] 283s Get:100 http://ftpmaster.internal/ubuntu plucky/universe s390x libhdf5-dev s390x 1.14.5+repack-3 [3385 kB] 286s Get:101 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB] 286s Get:102 http://ftpmaster.internal/ubuntu plucky/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB] 286s Get:103 http://ftpmaster.internal/ubuntu plucky/main s390x libicu-dev s390x 76.1-1ubuntu2 [12.2 MB] 297s Get:104 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.1-2 [2971 kB] 300s Get:105 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack-dev s390x 3.12.1-2 [5967 kB] 305s Get:106 http://ftpmaster.internal/ubuntu plucky/main s390x libncurses-dev s390x 6.5+20250216-2 [407 kB] 306s Get:107 http://ftpmaster.internal/ubuntu plucky/main s390x libthai-data all 0.1.29-2build1 [158 kB] 306s Get:108 http://ftpmaster.internal/ubuntu plucky/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB] 306s Get:109 http://ftpmaster.internal/ubuntu plucky/main s390x libpango-1.0-0 s390x 1.56.2-1 [253 kB] 306s Get:110 http://ftpmaster.internal/ubuntu plucky/main s390x libpangoft2-1.0-0 s390x 1.56.2-1 [50.2 kB] 306s Get:111 http://ftpmaster.internal/ubuntu plucky/main s390x libpangocairo-1.0-0 s390x 1.56.2-1 [28.2 kB] 306s Get:112 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB] 306s Get:113 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB] 306s Get:114 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-16-0 s390x 10.45-1 [259 kB] 307s Get:115 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-32-0 s390x 10.45-1 [245 kB] 307s Get:116 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-posix3 s390x 10.45-1 [7080 B] 307s Get:117 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-dev s390x 10.45-1 [899 kB] 308s Get:118 http://ftpmaster.internal/ubuntu plucky/main s390x libpng-dev s390x 1.6.47-1 [278 kB] 308s Get:119 http://ftpmaster.internal/ubuntu plucky/main s390x libreadline-dev s390x 8.2-6 [187 kB] 308s Get:120 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB] 308s Get:121 http://ftpmaster.internal/ubuntu plucky/main s390x libsm6 s390x 2:1.2.4-1 [18.4 kB] 308s Get:122 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB] 309s Get:123 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB] 309s Get:124 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB] 309s Get:125 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB] 310s Get:126 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB] 310s Get:127 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B] 310s Get:128 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.16-1 [830 kB] 310s Get:129 http://ftpmaster.internal/ubuntu plucky/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB] 311s Get:130 http://ftpmaster.internal/ubuntu plucky/main s390x zip s390x 3.0-14ubuntu2 [187 kB] 311s Get:131 http://ftpmaster.internal/ubuntu plucky/main s390x unzip s390x 6.0-28ubuntu6 [186 kB] 311s Get:132 http://ftpmaster.internal/ubuntu plucky/main s390x xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 311s Get:133 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-core s390x 4.4.3-1 [28.6 MB] 337s Get:134 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-littler s390x 0.3.20-2 [95.0 kB] 337s Get:135 http://ftpmaster.internal/ubuntu plucky/universe s390x littler all 0.3.20-2 [2554 B] 337s Get:136 http://ftpmaster.internal/ubuntu plucky/main s390x liblzma-dev s390x 5.6.4-1 [183 kB] 337s Get:137 http://ftpmaster.internal/ubuntu plucky/main s390x libtirpc-dev s390x 1.3.4+ds-1.3 [196 kB] 338s Get:138 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-dev all 4.4.3-1 [4176 B] 338s Get:139 http://ftpmaster.internal/ubuntu plucky/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 338s Get:140 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocgenerics all 0.52.0-2 [624 kB] 338s Get:141 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biobase s390x 2.66.0-2 [2339 kB] 340s Get:142 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-s4vectors s390x 0.44.0+dfsg-2 [2063 kB] 341s Get:143 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-iranges s390x 2.40.1-2 [2301 kB] 343s Get:144 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-dbi all 1.2.3-1 [853 kB] 344s Get:145 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bit s390x 4.6.0+dfsg-1 [471 kB] 344s Get:146 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bit64 s390x 4.6.0-1-1ubuntu2 [503 kB] 345s Get:147 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rlang s390x 1.1.5-1 [1713 kB] 346s Get:148 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cli s390x 3.6.4-1 [1379 kB] 347s Get:149 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-glue s390x 1.8.0-1 [164 kB] 348s Get:150 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 348s Get:151 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB] 349s Get:152 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-blob all 1.2.4-1 [49.8 kB] 349s Get:153 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fastmap s390x 1.2.0-1 [72.4 kB] 349s Get:154 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cachem s390x 1.1.0-1 [74.0 kB] 349s Get:155 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-memoise all 2.0.1-1 [53.9 kB] 349s Get:156 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 349s Get:157 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-plogr all 0.2.0-3build1 [15.1 kB] 349s Get:158 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cpp11 all 0.5.2-1 [233 kB] 349s Get:159 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rsqlite s390x 2.3.9-1 [1331 kB] 350s Get:160 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-curl s390x 6.2.1+dfsg-1ubuntu1 [196 kB] 351s Get:161 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-jsonlite s390x 1.9.1+dfsg-1 [447 kB] 351s Get:162 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mime s390x 0.12-2 [35.8 kB] 351s Get:163 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sys s390x 3.4.3-1 [45.2 kB] 351s Get:164 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-askpass s390x 1.2.1-1 [24.8 kB] 351s Get:165 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-openssl s390x 2.3.2+dfsg-1 [406 kB] 351s Get:166 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r6 all 2.6.1-1 [101 kB] 351s Get:167 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-httr all 1.4.7+dfsg-1 [459 kB] 352s Get:168 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-png s390x 0.1-8-1build2 [41.5 kB] 352s Get:169 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 352s Get:170 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-xvector s390x 0.46.0-2 [624 kB] 352s Get:171 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 353s Get:172 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 364s Get:173 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 368s Get:174 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-crayon all 1.5.3-1 [165 kB] 368s Get:175 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biostrings s390x 2.74.1+dfsg-2 [13.3 MB] 380s Get:176 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-keggrest all 1.46.0+dfsg-2 [183 kB] 380s Get:177 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-annotationdbi all 1.68.0-2 [4857 kB] 384s Get:178 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-xml s390x 3.99-0.18-1 [1744 kB] 386s Get:179 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-xtable all 1:1.8-4-2 [689 kB] 386s Get:180 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-annotate all 1.84.0+dfsg-2 [1870 kB] 388s Get:181 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-generics all 0.1.3-1 [81.3 kB] 388s Get:182 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB] 389s Get:183 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB] 389s Get:184 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pillar all 1.10.1+dfsg-1 [453 kB] 389s Get:185 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fansi s390x 1.0.5-1 [615 kB] 390s Get:186 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tibble s390x 3.2.1+dfsg-3 [420 kB] 390s Get:187 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-withr all 3.0.2+dfsg-1 [214 kB] 390s Get:188 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tidyselect s390x 1.2.1+dfsg-1 [222 kB] 391s Get:189 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-dplyr s390x 1.1.4-4 [1537 kB] 392s Get:190 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-purrr s390x 1.0.4-1 [553 kB] 393s Get:191 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-stringi s390x 1.8.4-1build1 [917 kB] 394s Get:192 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-stringr all 1.5.1-1 [290 kB] 394s Get:193 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tidyr s390x 1.3.1-1 [1157 kB] 395s Get:194 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-dbplyr all 2.5.0+dfsg-1 [1233 kB] 396s Get:195 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-filelock s390x 1.0.3-1 [29.2 kB] 396s Get:196 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocfilecache all 2.14.0+dfsg-2 [300 kB] 397s Get:197 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 397s Get:198 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocversion all 3.20.0-2 [11.1 kB] 397s Get:199 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rappdirs s390x 0.3.3-1 [47.5 kB] 397s Get:200 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-yaml s390x 2.3.10-1 [113 kB] 397s Get:201 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-annotationhub all 3.14.0+dfsg-2 [447 kB] 398s Get:202 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 398s Get:203 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-formatr all 1.14-2 [152 kB] 398s Get:204 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lambda.r all 1.2.4-2build1 [119 kB] 398s Get:205 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 398s Get:206 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 399s Get:207 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-snow all 1:0.4.4-2 [97.6 kB] 399s Get:208 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-codetools all 0.2-20-1 [90.5 kB] 399s Get:209 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bh all 1.84.0-1 [5962 B] 399s Get:210 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocparallel s390x 1.40.0-2 [1347 kB] 400s Get:211 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lattice s390x 0.22-6-1 [1340 kB] 402s Get:212 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-matrix s390x 1.7-3-1 [4449 kB] 406s Get:213 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-matrixstats s390x 1.5.0-1 [539 kB] 407s Get:214 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 407s Get:215 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-abind all 1.4-8-1 [66.9 kB] 407s Get:216 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-s4arrays s390x 1.6.0+dfsg-2 [700 kB] 408s Get:217 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-sparsearray s390x 1.6.2+dfsg-1 [1386 kB] 410s Get:218 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-delayedarray s390x 0.32.0+dfsg-2 [2068 kB] 411s Get:219 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 411s Get:220 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcpp s390x 1.0.14-1 [2003 kB] 413s Get:221 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-sparsematrixstats s390x 1.18.0+dfsg-2 [867 kB] 414s Get:222 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-delayedmatrixstats all 1.28.1+ds-1 [502 kB] 415s Get:223 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-experimenthub all 2.14.0+ds-2 [84.6 kB] 415s Get:224 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-survival s390x 3.8-3-1 [8250 kB] 423s Get:225 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-genefilter s390x 1.88.0-2 [1239 kB] 425s Get:226 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-genomicranges s390x 1.58.0+dfsg-2 [2087 kB] 427s Get:227 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 428s Get:228 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bitops s390x 1.0-9-1 [30.1 kB] 428s Get:229 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-rhtslib s390x 3.2.0+dfsg-2 [1458 kB] 429s Get:230 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-rsamtools s390x 2.22.0+dfsg-2 [3729 kB] 433s Get:231 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-genomicalignments s390x 1.42.0-2 [2152 kB] 435s Get:232 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcurl s390x 1.98-1.16+dfsg-1 [808 kB] 436s Get:233 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rjson s390x 0.2.23-1 [104 kB] 436s Get:234 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-restfulr s390x 0.0.15-1 [380 kB] 436s Get:235 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-rtracklayer s390x 1.66.0-2 [5235 kB] 441s Get:236 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-genomicfeatures all 1.58.0+dfsg-2 [937 kB] 442s Get:237 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-rhdf5lib s390x 1.28.0+dfsg-2build1 [97.3 kB] 442s Get:238 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-rhdf5filters s390x 1.18.0+dfsg-2 [124 kB] 442s Get:239 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-rhdf5 s390x 2.50.2+dfsg-1build1 [827 kB] 443s Get:240 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-hdf5array s390x 1.34.0-2build1 [8794 kB] 451s Get:241 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-singlecellexperiment all 1.28.1+ds-2 [829 kB] 452s Get:242 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-runit all 0.4.33-1 [377 kB] 453s Preconfiguring packages ... 453s Fetched 269 MB in 4min 10s (1078 kB/s) 453s Selecting previously unselected package libisl23:s390x. 453s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 453s Preparing to unpack .../000-libisl23_0.27-1_s390x.deb ... 453s Unpacking libisl23:s390x (0.27-1) ... 453s Selecting previously unselected package libmpc3:s390x. 453s Preparing to unpack .../001-libmpc3_1.3.1-1build2_s390x.deb ... 453s Unpacking libmpc3:s390x (1.3.1-1build2) ... 453s Selecting previously unselected package cpp-14-s390x-linux-gnu. 453s Preparing to unpack .../002-cpp-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ... 453s Unpacking cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ... 453s Selecting previously unselected package cpp-14. 453s Preparing to unpack .../003-cpp-14_14.2.0-17ubuntu3_s390x.deb ... 453s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 453s Selecting previously unselected package cpp-s390x-linux-gnu. 453s Preparing to unpack .../004-cpp-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ... 453s Unpacking cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 453s Selecting previously unselected package cpp. 453s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_s390x.deb ... 453s Unpacking cpp (4:14.2.0-1ubuntu1) ... 453s Selecting previously unselected package libcc1-0:s390x. 453s Preparing to unpack .../006-libcc1-0_15-20250222-0ubuntu1_s390x.deb ... 453s Unpacking libcc1-0:s390x (15-20250222-0ubuntu1) ... 453s Selecting previously unselected package libgomp1:s390x. 453s Preparing to unpack .../007-libgomp1_15-20250222-0ubuntu1_s390x.deb ... 453s Unpacking libgomp1:s390x (15-20250222-0ubuntu1) ... 453s Selecting previously unselected package libitm1:s390x. 453s Preparing to unpack .../008-libitm1_15-20250222-0ubuntu1_s390x.deb ... 453s Unpacking libitm1:s390x (15-20250222-0ubuntu1) ... 453s Selecting previously unselected package libasan8:s390x. 453s Preparing to unpack .../009-libasan8_15-20250222-0ubuntu1_s390x.deb ... 453s Unpacking libasan8:s390x (15-20250222-0ubuntu1) ... 453s Selecting previously unselected package libubsan1:s390x. 453s Preparing to unpack .../010-libubsan1_15-20250222-0ubuntu1_s390x.deb ... 453s Unpacking libubsan1:s390x (15-20250222-0ubuntu1) ... 453s Selecting previously unselected package libgcc-14-dev:s390x. 453s Preparing to unpack .../011-libgcc-14-dev_14.2.0-17ubuntu3_s390x.deb ... 453s Unpacking libgcc-14-dev:s390x (14.2.0-17ubuntu3) ... 453s Selecting previously unselected package gcc-14-s390x-linux-gnu. 453s Preparing to unpack .../012-gcc-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ... 453s Unpacking gcc-14-s390x-linux-gnu (14.2.0-17ubuntu3) ... 454s Selecting previously unselected package gcc-14. 454s Preparing to unpack .../013-gcc-14_14.2.0-17ubuntu3_s390x.deb ... 454s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 454s Selecting previously unselected package gcc-s390x-linux-gnu. 454s Preparing to unpack .../014-gcc-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ... 454s Unpacking gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 454s Selecting previously unselected package gcc. 454s Preparing to unpack .../015-gcc_4%3a14.2.0-1ubuntu1_s390x.deb ... 454s Unpacking gcc (4:14.2.0-1ubuntu1) ... 454s Selecting previously unselected package libstdc++-14-dev:s390x. 454s Preparing to unpack .../016-libstdc++-14-dev_14.2.0-17ubuntu3_s390x.deb ... 454s Unpacking libstdc++-14-dev:s390x (14.2.0-17ubuntu3) ... 454s Selecting previously unselected package g++-14-s390x-linux-gnu. 454s Preparing to unpack .../017-g++-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ... 454s Unpacking g++-14-s390x-linux-gnu (14.2.0-17ubuntu3) ... 454s Selecting previously unselected package g++-14. 454s Preparing to unpack .../018-g++-14_14.2.0-17ubuntu3_s390x.deb ... 454s Unpacking g++-14 (14.2.0-17ubuntu3) ... 454s Selecting previously unselected package g++-s390x-linux-gnu. 454s Preparing to unpack .../019-g++-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ... 454s Unpacking g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 454s Selecting previously unselected package g++. 454s Preparing to unpack .../020-g++_4%3a14.2.0-1ubuntu1_s390x.deb ... 454s Unpacking g++ (4:14.2.0-1ubuntu1) ... 454s Selecting previously unselected package build-essential. 454s Preparing to unpack .../021-build-essential_12.10ubuntu1_s390x.deb ... 454s Unpacking build-essential (12.10ubuntu1) ... 454s Selecting previously unselected package dctrl-tools. 454s Preparing to unpack .../022-dctrl-tools_2.24-3build3_s390x.deb ... 454s Unpacking dctrl-tools (2.24-3build3) ... 454s Selecting previously unselected package libfreetype6:s390x. 454s Preparing to unpack .../023-libfreetype6_2.13.3+dfsg-1_s390x.deb ... 454s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ... 454s Selecting previously unselected package fonts-dejavu-mono. 454s Preparing to unpack .../024-fonts-dejavu-mono_2.37-8_all.deb ... 454s Unpacking fonts-dejavu-mono (2.37-8) ... 454s Selecting previously unselected package fonts-dejavu-core. 454s Preparing to unpack .../025-fonts-dejavu-core_2.37-8_all.deb ... 454s Unpacking fonts-dejavu-core (2.37-8) ... 454s Selecting previously unselected package fontconfig-config. 454s Preparing to unpack .../026-fontconfig-config_2.15.0-2ubuntu1_s390x.deb ... 454s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 454s Selecting previously unselected package libfontconfig1:s390x. 454s Preparing to unpack .../027-libfontconfig1_2.15.0-2ubuntu1_s390x.deb ... 454s Unpacking libfontconfig1:s390x (2.15.0-2ubuntu1) ... 454s Selecting previously unselected package fontconfig. 454s Preparing to unpack .../028-fontconfig_2.15.0-2ubuntu1_s390x.deb ... 454s Unpacking fontconfig (2.15.0-2ubuntu1) ... 454s Selecting previously unselected package libgfortran5:s390x. 454s Preparing to unpack .../029-libgfortran5_15-20250222-0ubuntu1_s390x.deb ... 454s Unpacking libgfortran5:s390x (15-20250222-0ubuntu1) ... 454s Selecting previously unselected package libgfortran-14-dev:s390x. 454s Preparing to unpack .../030-libgfortran-14-dev_14.2.0-17ubuntu3_s390x.deb ... 454s Unpacking libgfortran-14-dev:s390x (14.2.0-17ubuntu3) ... 454s Selecting previously unselected package gfortran-14-s390x-linux-gnu. 454s Preparing to unpack .../031-gfortran-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ... 454s Unpacking gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu3) ... 454s Selecting previously unselected package gfortran-14. 454s Preparing to unpack .../032-gfortran-14_14.2.0-17ubuntu3_s390x.deb ... 454s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 454s Selecting previously unselected package gfortran-s390x-linux-gnu. 454s Preparing to unpack .../033-gfortran-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ... 454s Unpacking gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 454s Selecting previously unselected package gfortran. 454s Preparing to unpack .../034-gfortran_4%3a14.2.0-1ubuntu1_s390x.deb ... 454s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 454s Selecting previously unselected package hdf5-helpers. 454s Preparing to unpack .../035-hdf5-helpers_1.14.5+repack-3_s390x.deb ... 454s Unpacking hdf5-helpers (1.14.5+repack-3) ... 454s Selecting previously unselected package icu-devtools. 454s Preparing to unpack .../036-icu-devtools_76.1-1ubuntu2_s390x.deb ... 454s Unpacking icu-devtools (76.1-1ubuntu2) ... 454s Selecting previously unselected package comerr-dev:s390x. 454s Preparing to unpack .../037-comerr-dev_2.1-1.47.2-1ubuntu1_s390x.deb ... 454s Unpacking comerr-dev:s390x (2.1-1.47.2-1ubuntu1) ... 454s Selecting previously unselected package libgssrpc4t64:s390x. 454s Preparing to unpack .../038-libgssrpc4t64_1.21.3-4ubuntu2_s390x.deb ... 454s Unpacking libgssrpc4t64:s390x (1.21.3-4ubuntu2) ... 454s Selecting previously unselected package libkadm5clnt-mit12:s390x. 454s Preparing to unpack .../039-libkadm5clnt-mit12_1.21.3-4ubuntu2_s390x.deb ... 454s Unpacking libkadm5clnt-mit12:s390x (1.21.3-4ubuntu2) ... 454s Selecting previously unselected package libkdb5-10t64:s390x. 454s Preparing to unpack .../040-libkdb5-10t64_1.21.3-4ubuntu2_s390x.deb ... 454s Unpacking libkdb5-10t64:s390x (1.21.3-4ubuntu2) ... 454s Selecting previously unselected package libkadm5srv-mit12:s390x. 454s Preparing to unpack .../041-libkadm5srv-mit12_1.21.3-4ubuntu2_s390x.deb ... 454s Unpacking libkadm5srv-mit12:s390x (1.21.3-4ubuntu2) ... 454s Selecting previously unselected package krb5-multidev:s390x. 454s Preparing to unpack .../042-krb5-multidev_1.21.3-4ubuntu2_s390x.deb ... 454s Unpacking krb5-multidev:s390x (1.21.3-4ubuntu2) ... 454s Selecting previously unselected package libaec0:s390x. 454s Preparing to unpack .../043-libaec0_1.1.3-1_s390x.deb ... 454s Unpacking libaec0:s390x (1.1.3-1) ... 454s Selecting previously unselected package libblas3:s390x. 454s Preparing to unpack .../044-libblas3_3.12.1-2_s390x.deb ... 455s Unpacking libblas3:s390x (3.12.1-2) ... 455s Selecting previously unselected package libblas-dev:s390x. 455s Preparing to unpack .../045-libblas-dev_3.12.1-2_s390x.deb ... 455s Unpacking libblas-dev:s390x (3.12.1-2) ... 455s Selecting previously unselected package libsnappy1v5:s390x. 455s Preparing to unpack .../046-libsnappy1v5_1.2.1-1_s390x.deb ... 455s Unpacking libsnappy1v5:s390x (1.2.1-1) ... 455s Selecting previously unselected package libblosc1:s390x. 455s Preparing to unpack .../047-libblosc1_1.21.5+ds-1build1_s390x.deb ... 455s Unpacking libblosc1:s390x (1.21.5+ds-1build1) ... 455s Selecting previously unselected package libboost1.83-dev:s390x. 455s Preparing to unpack .../048-libboost1.83-dev_1.83.0-4.1ubuntu2_s390x.deb ... 455s Unpacking libboost1.83-dev:s390x (1.83.0-4.1ubuntu2) ... 456s Selecting previously unselected package libboost-dev:s390x. 456s Preparing to unpack .../049-libboost-dev_1.83.0.2ubuntu1_s390x.deb ... 456s Unpacking libboost-dev:s390x (1.83.0.2ubuntu1) ... 456s Selecting previously unselected package libbrotli-dev:s390x. 456s Preparing to unpack .../050-libbrotli-dev_1.1.0-2build4_s390x.deb ... 456s Unpacking libbrotli-dev:s390x (1.1.0-2build4) ... 456s Selecting previously unselected package libbz2-dev:s390x. 456s Preparing to unpack .../051-libbz2-dev_1.0.8-6_s390x.deb ... 456s Unpacking libbz2-dev:s390x (1.0.8-6) ... 456s Selecting previously unselected package libpixman-1-0:s390x. 456s Preparing to unpack .../052-libpixman-1-0_0.44.0-3_s390x.deb ... 456s Unpacking libpixman-1-0:s390x (0.44.0-3) ... 456s Selecting previously unselected package libxcb-render0:s390x. 456s Preparing to unpack .../053-libxcb-render0_1.17.0-2_s390x.deb ... 456s Unpacking libxcb-render0:s390x (1.17.0-2) ... 456s Selecting previously unselected package libxcb-shm0:s390x. 456s Preparing to unpack .../054-libxcb-shm0_1.17.0-2_s390x.deb ... 456s Unpacking libxcb-shm0:s390x (1.17.0-2) ... 456s Selecting previously unselected package libxrender1:s390x. 456s Preparing to unpack .../055-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ... 456s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ... 456s Selecting previously unselected package libcairo2:s390x. 456s Preparing to unpack .../056-libcairo2_1.18.2-2_s390x.deb ... 456s Unpacking libcairo2:s390x (1.18.2-2) ... 456s Selecting previously unselected package libidn2-dev:s390x. 456s Preparing to unpack .../057-libidn2-dev_2.3.7-2build2_s390x.deb ... 456s Unpacking libidn2-dev:s390x (2.3.7-2build2) ... 456s Selecting previously unselected package libkrb5-dev:s390x. 456s Preparing to unpack .../058-libkrb5-dev_1.21.3-4ubuntu2_s390x.deb ... 456s Unpacking libkrb5-dev:s390x (1.21.3-4ubuntu2) ... 456s Selecting previously unselected package libldap-dev:s390x. 456s Preparing to unpack .../059-libldap-dev_2.6.9+dfsg-1~exp2ubuntu1_s390x.deb ... 456s Unpacking libldap-dev:s390x (2.6.9+dfsg-1~exp2ubuntu1) ... 456s Selecting previously unselected package libpkgconf3:s390x. 456s Preparing to unpack .../060-libpkgconf3_1.8.1-4_s390x.deb ... 456s Unpacking libpkgconf3:s390x (1.8.1-4) ... 456s Selecting previously unselected package pkgconf-bin. 456s Preparing to unpack .../061-pkgconf-bin_1.8.1-4_s390x.deb ... 456s Unpacking pkgconf-bin (1.8.1-4) ... 456s Selecting previously unselected package pkgconf:s390x. 456s Preparing to unpack .../062-pkgconf_1.8.1-4_s390x.deb ... 456s Unpacking pkgconf:s390x (1.8.1-4) ... 456s Selecting previously unselected package libnghttp2-dev:s390x. 456s Preparing to unpack .../063-libnghttp2-dev_1.64.0-1_s390x.deb ... 456s Unpacking libnghttp2-dev:s390x (1.64.0-1) ... 456s Selecting previously unselected package libpsl-dev:s390x. 456s Preparing to unpack .../064-libpsl-dev_0.21.2-1.1build1_s390x.deb ... 456s Unpacking libpsl-dev:s390x (0.21.2-1.1build1) ... 456s Selecting previously unselected package libgmpxx4ldbl:s390x. 456s Preparing to unpack .../065-libgmpxx4ldbl_2%3a6.3.0+dfsg-3ubuntu1_s390x.deb ... 456s Unpacking libgmpxx4ldbl:s390x (2:6.3.0+dfsg-3ubuntu1) ... 456s Selecting previously unselected package libgmp-dev:s390x. 456s Preparing to unpack .../066-libgmp-dev_2%3a6.3.0+dfsg-3ubuntu1_s390x.deb ... 456s Unpacking libgmp-dev:s390x (2:6.3.0+dfsg-3ubuntu1) ... 456s Selecting previously unselected package libevent-2.1-7t64:s390x. 456s Preparing to unpack .../067-libevent-2.1-7t64_2.1.12-stable-10_s390x.deb ... 456s Unpacking libevent-2.1-7t64:s390x (2.1.12-stable-10) ... 456s Selecting previously unselected package libunbound8:s390x. 456s Preparing to unpack .../068-libunbound8_1.22.0-1ubuntu1_s390x.deb ... 456s Unpacking libunbound8:s390x (1.22.0-1ubuntu1) ... 456s Selecting previously unselected package libgnutls-dane0t64:s390x. 456s Preparing to unpack .../069-libgnutls-dane0t64_3.8.9-2ubuntu2_s390x.deb ... 456s Unpacking libgnutls-dane0t64:s390x (3.8.9-2ubuntu2) ... 456s Selecting previously unselected package libgnutls-openssl27t64:s390x. 456s Preparing to unpack .../070-libgnutls-openssl27t64_3.8.9-2ubuntu2_s390x.deb ... 456s Unpacking libgnutls-openssl27t64:s390x (3.8.9-2ubuntu2) ... 456s Selecting previously unselected package libp11-kit-dev:s390x. 456s Preparing to unpack .../071-libp11-kit-dev_0.25.5-2ubuntu3_s390x.deb ... 456s Unpacking libp11-kit-dev:s390x (0.25.5-2ubuntu3) ... 456s Selecting previously unselected package libtasn1-6-dev:s390x. 456s Preparing to unpack .../072-libtasn1-6-dev_4.20.0-2_s390x.deb ... 456s Unpacking libtasn1-6-dev:s390x (4.20.0-2) ... 456s Selecting previously unselected package nettle-dev:s390x. 456s Preparing to unpack .../073-nettle-dev_3.10.1-1_s390x.deb ... 456s Unpacking nettle-dev:s390x (3.10.1-1) ... 456s Selecting previously unselected package libgnutls28-dev:s390x. 456s Preparing to unpack .../074-libgnutls28-dev_3.8.9-2ubuntu2_s390x.deb ... 456s Unpacking libgnutls28-dev:s390x (3.8.9-2ubuntu2) ... 456s Selecting previously unselected package zlib1g-dev:s390x. 456s Preparing to unpack .../075-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_s390x.deb ... 456s Unpacking zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 456s Selecting previously unselected package librtmp-dev:s390x. 456s Preparing to unpack .../076-librtmp-dev_2.4+20151223.gitfa8646d.1-2build7_s390x.deb ... 456s Unpacking librtmp-dev:s390x (2.4+20151223.gitfa8646d.1-2build7) ... 456s Selecting previously unselected package libssl-dev:s390x. 456s Preparing to unpack .../077-libssl-dev_3.4.1-1ubuntu1_s390x.deb ... 456s Unpacking libssl-dev:s390x (3.4.1-1ubuntu1) ... 456s Selecting previously unselected package libssh2-1-dev:s390x. 456s Preparing to unpack .../078-libssh2-1-dev_1.11.1-1_s390x.deb ... 456s Unpacking libssh2-1-dev:s390x (1.11.1-1) ... 456s Selecting previously unselected package libzstd-dev:s390x. 456s Preparing to unpack .../079-libzstd-dev_1.5.6+dfsg-2_s390x.deb ... 456s Unpacking libzstd-dev:s390x (1.5.6+dfsg-2) ... 456s Selecting previously unselected package libcurl4-openssl-dev:s390x. 456s Preparing to unpack .../080-libcurl4-openssl-dev_8.12.1-3ubuntu1_s390x.deb ... 456s Unpacking libcurl4-openssl-dev:s390x (8.12.1-3ubuntu1) ... 456s Selecting previously unselected package libdatrie1:s390x. 456s Preparing to unpack .../081-libdatrie1_0.2.13-3build1_s390x.deb ... 456s Unpacking libdatrie1:s390x (0.2.13-3build1) ... 456s Selecting previously unselected package libdeflate0:s390x. 456s Preparing to unpack .../082-libdeflate0_1.23-1_s390x.deb ... 456s Unpacking libdeflate0:s390x (1.23-1) ... 456s Selecting previously unselected package libdeflate-dev:s390x. 456s Preparing to unpack .../083-libdeflate-dev_1.23-1_s390x.deb ... 456s Unpacking libdeflate-dev:s390x (1.23-1) ... 456s Selecting previously unselected package libgraphite2-3:s390x. 456s Preparing to unpack .../084-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ... 456s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 456s Selecting previously unselected package libharfbuzz0b:s390x. 456s Preparing to unpack .../085-libharfbuzz0b_10.2.0-1_s390x.deb ... 456s Unpacking libharfbuzz0b:s390x (10.2.0-1) ... 456s Selecting previously unselected package libsz2:s390x. 456s Preparing to unpack .../086-libsz2_1.1.3-1_s390x.deb ... 456s Unpacking libsz2:s390x (1.1.3-1) ... 456s Selecting previously unselected package libhdf5-310:s390x. 456s Preparing to unpack .../087-libhdf5-310_1.14.5+repack-3_s390x.deb ... 456s Unpacking libhdf5-310:s390x (1.14.5+repack-3) ... 456s Selecting previously unselected package libhdf5-cpp-310:s390x. 456s Preparing to unpack .../088-libhdf5-cpp-310_1.14.5+repack-3_s390x.deb ... 456s Unpacking libhdf5-cpp-310:s390x (1.14.5+repack-3) ... 456s Selecting previously unselected package libhdf5-fortran-310:s390x. 456s Preparing to unpack .../089-libhdf5-fortran-310_1.14.5+repack-3_s390x.deb ... 456s Unpacking libhdf5-fortran-310:s390x (1.14.5+repack-3) ... 456s Selecting previously unselected package libhdf5-hl-310:s390x. 456s Preparing to unpack .../090-libhdf5-hl-310_1.14.5+repack-3_s390x.deb ... 456s Unpacking libhdf5-hl-310:s390x (1.14.5+repack-3) ... 456s Selecting previously unselected package libhdf5-hl-fortran-310:s390x. 456s Preparing to unpack .../091-libhdf5-hl-fortran-310_1.14.5+repack-3_s390x.deb ... 456s Unpacking libhdf5-hl-fortran-310:s390x (1.14.5+repack-3) ... 456s Selecting previously unselected package libhdf5-hl-cpp-310:s390x. 456s Preparing to unpack .../092-libhdf5-hl-cpp-310_1.14.5+repack-3_s390x.deb ... 456s Unpacking libhdf5-hl-cpp-310:s390x (1.14.5+repack-3) ... 456s Selecting previously unselected package libjpeg-turbo8:s390x. 456s Preparing to unpack .../093-libjpeg-turbo8_2.1.5-3ubuntu2_s390x.deb ... 456s Unpacking libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ... 456s Selecting previously unselected package libjpeg-turbo8-dev:s390x. 456s Preparing to unpack .../094-libjpeg-turbo8-dev_2.1.5-3ubuntu2_s390x.deb ... 456s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ... 456s Selecting previously unselected package libjpeg8:s390x. 456s Preparing to unpack .../095-libjpeg8_8c-2ubuntu11_s390x.deb ... 456s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 456s Selecting previously unselected package libjpeg8-dev:s390x. 456s Preparing to unpack .../096-libjpeg8-dev_8c-2ubuntu11_s390x.deb ... 456s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ... 456s Selecting previously unselected package libjpeg-dev:s390x. 456s Preparing to unpack .../097-libjpeg-dev_8c-2ubuntu11_s390x.deb ... 456s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ... 456s Selecting previously unselected package libaec-dev:s390x. 456s Preparing to unpack .../098-libaec-dev_1.1.3-1_s390x.deb ... 456s Unpacking libaec-dev:s390x (1.1.3-1) ... 456s Selecting previously unselected package libhdf5-dev. 456s Preparing to unpack .../099-libhdf5-dev_1.14.5+repack-3_s390x.deb ... 456s Unpacking libhdf5-dev (1.14.5+repack-3) ... 456s Selecting previously unselected package x11-common. 456s Preparing to unpack .../100-x11-common_1%3a7.7+23ubuntu3_all.deb ... 456s Unpacking x11-common (1:7.7+23ubuntu3) ... 456s Selecting previously unselected package libice6:s390x. 456s Preparing to unpack .../101-libice6_2%3a1.1.1-1_s390x.deb ... 456s Unpacking libice6:s390x (2:1.1.1-1) ... 456s Selecting previously unselected package libicu-dev:s390x. 456s Preparing to unpack .../102-libicu-dev_76.1-1ubuntu2_s390x.deb ... 456s Unpacking libicu-dev:s390x (76.1-1ubuntu2) ... 457s Selecting previously unselected package liblapack3:s390x. 457s Preparing to unpack .../103-liblapack3_3.12.1-2_s390x.deb ... 457s Unpacking liblapack3:s390x (3.12.1-2) ... 457s Selecting previously unselected package liblapack-dev:s390x. 457s Preparing to unpack .../104-liblapack-dev_3.12.1-2_s390x.deb ... 457s Unpacking liblapack-dev:s390x (3.12.1-2) ... 457s Selecting previously unselected package libncurses-dev:s390x. 457s Preparing to unpack .../105-libncurses-dev_6.5+20250216-2_s390x.deb ... 457s Unpacking libncurses-dev:s390x (6.5+20250216-2) ... 457s Selecting previously unselected package libthai-data. 457s Preparing to unpack .../106-libthai-data_0.1.29-2build1_all.deb ... 457s Unpacking libthai-data (0.1.29-2build1) ... 457s Selecting previously unselected package libthai0:s390x. 457s Preparing to unpack .../107-libthai0_0.1.29-2build1_s390x.deb ... 457s Unpacking libthai0:s390x (0.1.29-2build1) ... 457s Selecting previously unselected package libpango-1.0-0:s390x. 457s Preparing to unpack .../108-libpango-1.0-0_1.56.2-1_s390x.deb ... 457s Unpacking libpango-1.0-0:s390x (1.56.2-1) ... 457s Selecting previously unselected package libpangoft2-1.0-0:s390x. 457s Preparing to unpack .../109-libpangoft2-1.0-0_1.56.2-1_s390x.deb ... 457s Unpacking libpangoft2-1.0-0:s390x (1.56.2-1) ... 457s Selecting previously unselected package libpangocairo-1.0-0:s390x. 457s Preparing to unpack .../110-libpangocairo-1.0-0_1.56.2-1_s390x.deb ... 457s Unpacking libpangocairo-1.0-0:s390x (1.56.2-1) ... 457s Selecting previously unselected package libpaper2:s390x. 457s Preparing to unpack .../111-libpaper2_2.2.5-0.3_s390x.deb ... 457s Unpacking libpaper2:s390x (2.2.5-0.3) ... 457s Selecting previously unselected package libpaper-utils. 457s Preparing to unpack .../112-libpaper-utils_2.2.5-0.3_s390x.deb ... 457s Unpacking libpaper-utils (2.2.5-0.3) ... 457s Selecting previously unselected package libpcre2-16-0:s390x. 457s Preparing to unpack .../113-libpcre2-16-0_10.45-1_s390x.deb ... 457s Unpacking libpcre2-16-0:s390x (10.45-1) ... 457s Selecting previously unselected package libpcre2-32-0:s390x. 457s Preparing to unpack .../114-libpcre2-32-0_10.45-1_s390x.deb ... 457s Unpacking libpcre2-32-0:s390x (10.45-1) ... 457s Selecting previously unselected package libpcre2-posix3:s390x. 457s Preparing to unpack .../115-libpcre2-posix3_10.45-1_s390x.deb ... 457s Unpacking libpcre2-posix3:s390x (10.45-1) ... 457s Selecting previously unselected package libpcre2-dev:s390x. 457s Preparing to unpack .../116-libpcre2-dev_10.45-1_s390x.deb ... 457s Unpacking libpcre2-dev:s390x (10.45-1) ... 457s Selecting previously unselected package libpng-dev:s390x. 457s Preparing to unpack .../117-libpng-dev_1.6.47-1_s390x.deb ... 457s Unpacking libpng-dev:s390x (1.6.47-1) ... 457s Selecting previously unselected package libreadline-dev:s390x. 457s Preparing to unpack .../118-libreadline-dev_8.2-6_s390x.deb ... 457s Unpacking libreadline-dev:s390x (8.2-6) ... 457s Selecting previously unselected package libsharpyuv0:s390x. 457s Preparing to unpack .../119-libsharpyuv0_1.5.0-0.1_s390x.deb ... 457s Unpacking libsharpyuv0:s390x (1.5.0-0.1) ... 457s Selecting previously unselected package libsm6:s390x. 457s Preparing to unpack .../120-libsm6_2%3a1.2.4-1_s390x.deb ... 457s Unpacking libsm6:s390x (2:1.2.4-1) ... 457s Selecting previously unselected package libtcl8.6:s390x. 457s Preparing to unpack .../121-libtcl8.6_8.6.16+dfsg-1_s390x.deb ... 457s Unpacking libtcl8.6:s390x (8.6.16+dfsg-1) ... 457s Selecting previously unselected package libjbig0:s390x. 457s Preparing to unpack .../122-libjbig0_2.1-6.1ubuntu2_s390x.deb ... 457s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ... 457s Selecting previously unselected package libwebp7:s390x. 457s Preparing to unpack .../123-libwebp7_1.5.0-0.1_s390x.deb ... 457s Unpacking libwebp7:s390x (1.5.0-0.1) ... 457s Selecting previously unselected package libtiff6:s390x. 457s Preparing to unpack .../124-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ... 457s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 457s Selecting previously unselected package libxft2:s390x. 457s Preparing to unpack .../125-libxft2_2.3.6-1build1_s390x.deb ... 457s Unpacking libxft2:s390x (2.3.6-1build1) ... 457s Selecting previously unselected package libxss1:s390x. 457s Preparing to unpack .../126-libxss1_1%3a1.2.3-1build3_s390x.deb ... 457s Unpacking libxss1:s390x (1:1.2.3-1build3) ... 457s Selecting previously unselected package libtk8.6:s390x. 457s Preparing to unpack .../127-libtk8.6_8.6.16-1_s390x.deb ... 457s Unpacking libtk8.6:s390x (8.6.16-1) ... 457s Selecting previously unselected package libxt6t64:s390x. 457s Preparing to unpack .../128-libxt6t64_1%3a1.2.1-1.2build1_s390x.deb ... 457s Unpacking libxt6t64:s390x (1:1.2.1-1.2build1) ... 457s Selecting previously unselected package zip. 457s Preparing to unpack .../129-zip_3.0-14ubuntu2_s390x.deb ... 457s Unpacking zip (3.0-14ubuntu2) ... 457s Selecting previously unselected package unzip. 457s Preparing to unpack .../130-unzip_6.0-28ubuntu6_s390x.deb ... 457s Unpacking unzip (6.0-28ubuntu6) ... 457s Selecting previously unselected package xdg-utils. 457s Preparing to unpack .../131-xdg-utils_1.2.1-2ubuntu1_all.deb ... 457s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 457s Selecting previously unselected package r-base-core. 457s Preparing to unpack .../132-r-base-core_4.4.3-1_s390x.deb ... 457s Unpacking r-base-core (4.4.3-1) ... 457s Selecting previously unselected package r-cran-littler. 457s Preparing to unpack .../133-r-cran-littler_0.3.20-2_s390x.deb ... 457s Unpacking r-cran-littler (0.3.20-2) ... 457s Selecting previously unselected package littler. 457s Preparing to unpack .../134-littler_0.3.20-2_all.deb ... 457s Unpacking littler (0.3.20-2) ... 457s Selecting previously unselected package liblzma-dev:s390x. 457s Preparing to unpack .../135-liblzma-dev_5.6.4-1_s390x.deb ... 457s Unpacking liblzma-dev:s390x (5.6.4-1) ... 457s Selecting previously unselected package libtirpc-dev:s390x. 457s Preparing to unpack .../136-libtirpc-dev_1.3.4+ds-1.3_s390x.deb ... 457s Unpacking libtirpc-dev:s390x (1.3.4+ds-1.3) ... 457s Selecting previously unselected package r-base-dev. 457s Preparing to unpack .../137-r-base-dev_4.4.3-1_all.deb ... 457s Unpacking r-base-dev (4.4.3-1) ... 457s Selecting previously unselected package pkg-r-autopkgtest. 457s Preparing to unpack .../138-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 457s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 457s Selecting previously unselected package r-bioc-biocgenerics. 457s Preparing to unpack .../139-r-bioc-biocgenerics_0.52.0-2_all.deb ... 457s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 457s Selecting previously unselected package r-bioc-biobase. 457s Preparing to unpack .../140-r-bioc-biobase_2.66.0-2_s390x.deb ... 457s Unpacking r-bioc-biobase (2.66.0-2) ... 458s Selecting previously unselected package r-bioc-s4vectors. 458s Preparing to unpack .../141-r-bioc-s4vectors_0.44.0+dfsg-2_s390x.deb ... 458s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 458s Selecting previously unselected package r-bioc-iranges. 458s Preparing to unpack .../142-r-bioc-iranges_2.40.1-2_s390x.deb ... 458s Unpacking r-bioc-iranges (2.40.1-2) ... 458s Selecting previously unselected package r-cran-dbi. 458s Preparing to unpack .../143-r-cran-dbi_1.2.3-1_all.deb ... 458s Unpacking r-cran-dbi (1.2.3-1) ... 458s Selecting previously unselected package r-cran-bit. 458s Preparing to unpack .../144-r-cran-bit_4.6.0+dfsg-1_s390x.deb ... 458s Unpacking r-cran-bit (4.6.0+dfsg-1) ... 458s Selecting previously unselected package r-cran-bit64. 458s Preparing to unpack .../145-r-cran-bit64_4.6.0-1-1ubuntu2_s390x.deb ... 458s Unpacking r-cran-bit64 (4.6.0-1-1ubuntu2) ... 458s Selecting previously unselected package r-cran-rlang. 458s Preparing to unpack .../146-r-cran-rlang_1.1.5-1_s390x.deb ... 458s Unpacking r-cran-rlang (1.1.5-1) ... 458s Selecting previously unselected package r-cran-cli. 458s Preparing to unpack .../147-r-cran-cli_3.6.4-1_s390x.deb ... 458s Unpacking r-cran-cli (3.6.4-1) ... 458s Selecting previously unselected package r-cran-glue. 458s Preparing to unpack .../148-r-cran-glue_1.8.0-1_s390x.deb ... 458s Unpacking r-cran-glue (1.8.0-1) ... 458s Selecting previously unselected package r-cran-lifecycle. 458s Preparing to unpack .../149-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 458s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 458s Selecting previously unselected package r-cran-vctrs. 458s Preparing to unpack .../150-r-cran-vctrs_0.6.5-1_s390x.deb ... 458s Unpacking r-cran-vctrs (0.6.5-1) ... 458s Selecting previously unselected package r-cran-blob. 458s Preparing to unpack .../151-r-cran-blob_1.2.4-1_all.deb ... 458s Unpacking r-cran-blob (1.2.4-1) ... 458s Selecting previously unselected package r-cran-fastmap. 458s Preparing to unpack .../152-r-cran-fastmap_1.2.0-1_s390x.deb ... 458s Unpacking r-cran-fastmap (1.2.0-1) ... 458s Selecting previously unselected package r-cran-cachem. 458s Preparing to unpack .../153-r-cran-cachem_1.1.0-1_s390x.deb ... 458s Unpacking r-cran-cachem (1.1.0-1) ... 458s Selecting previously unselected package r-cran-memoise. 458s Preparing to unpack .../154-r-cran-memoise_2.0.1-1_all.deb ... 458s Unpacking r-cran-memoise (2.0.1-1) ... 458s Selecting previously unselected package r-cran-pkgconfig. 458s Preparing to unpack .../155-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 458s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 458s Selecting previously unselected package r-cran-plogr. 458s Preparing to unpack .../156-r-cran-plogr_0.2.0-3build1_all.deb ... 458s Unpacking r-cran-plogr (0.2.0-3build1) ... 458s Selecting previously unselected package r-cran-cpp11. 458s Preparing to unpack .../157-r-cran-cpp11_0.5.2-1_all.deb ... 458s Unpacking r-cran-cpp11 (0.5.2-1) ... 458s Selecting previously unselected package r-cran-rsqlite. 458s Preparing to unpack .../158-r-cran-rsqlite_2.3.9-1_s390x.deb ... 458s Unpacking r-cran-rsqlite (2.3.9-1) ... 458s Selecting previously unselected package r-cran-curl. 458s Preparing to unpack .../159-r-cran-curl_6.2.1+dfsg-1ubuntu1_s390x.deb ... 458s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 458s Selecting previously unselected package r-cran-jsonlite. 458s Preparing to unpack .../160-r-cran-jsonlite_1.9.1+dfsg-1_s390x.deb ... 458s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 458s Selecting previously unselected package r-cran-mime. 458s Preparing to unpack .../161-r-cran-mime_0.12-2_s390x.deb ... 458s Unpacking r-cran-mime (0.12-2) ... 458s Selecting previously unselected package r-cran-sys. 458s Preparing to unpack .../162-r-cran-sys_3.4.3-1_s390x.deb ... 458s Unpacking r-cran-sys (3.4.3-1) ... 458s Selecting previously unselected package r-cran-askpass. 458s Preparing to unpack .../163-r-cran-askpass_1.2.1-1_s390x.deb ... 458s Unpacking r-cran-askpass (1.2.1-1) ... 458s Selecting previously unselected package r-cran-openssl. 458s Preparing to unpack .../164-r-cran-openssl_2.3.2+dfsg-1_s390x.deb ... 458s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 458s Selecting previously unselected package r-cran-r6. 458s Preparing to unpack .../165-r-cran-r6_2.6.1-1_all.deb ... 458s Unpacking r-cran-r6 (2.6.1-1) ... 458s Selecting previously unselected package r-cran-httr. 458s Preparing to unpack .../166-r-cran-httr_1.4.7+dfsg-1_all.deb ... 458s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 458s Selecting previously unselected package r-cran-png. 458s Preparing to unpack .../167-r-cran-png_0.1-8-1build2_s390x.deb ... 458s Unpacking r-cran-png (0.1-8-1build2) ... 458s Selecting previously unselected package r-bioc-zlibbioc. 458s Preparing to unpack .../168-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 458s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 458s Selecting previously unselected package r-bioc-xvector. 458s Preparing to unpack .../169-r-bioc-xvector_0.46.0-2_s390x.deb ... 458s Unpacking r-bioc-xvector (0.46.0-2) ... 458s Selecting previously unselected package r-bioc-ucsc.utils. 458s Preparing to unpack .../170-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 458s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 458s Selecting previously unselected package r-bioc-genomeinfodbdata. 458s Preparing to unpack .../171-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 458s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 458s Selecting previously unselected package r-bioc-genomeinfodb. 458s Preparing to unpack .../172-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 458s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 458s Selecting previously unselected package r-cran-crayon. 458s Preparing to unpack .../173-r-cran-crayon_1.5.3-1_all.deb ... 458s Unpacking r-cran-crayon (1.5.3-1) ... 458s Selecting previously unselected package r-bioc-biostrings. 458s Preparing to unpack .../174-r-bioc-biostrings_2.74.1+dfsg-2_s390x.deb ... 458s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 458s Selecting previously unselected package r-bioc-keggrest. 458s Preparing to unpack .../175-r-bioc-keggrest_1.46.0+dfsg-2_all.deb ... 458s Unpacking r-bioc-keggrest (1.46.0+dfsg-2) ... 458s Selecting previously unselected package r-bioc-annotationdbi. 458s Preparing to unpack .../176-r-bioc-annotationdbi_1.68.0-2_all.deb ... 458s Unpacking r-bioc-annotationdbi (1.68.0-2) ... 458s Selecting previously unselected package r-cran-xml. 458s Preparing to unpack .../177-r-cran-xml_3.99-0.18-1_s390x.deb ... 458s Unpacking r-cran-xml (3.99-0.18-1) ... 458s Selecting previously unselected package r-cran-xtable. 458s Preparing to unpack .../178-r-cran-xtable_1%3a1.8-4-2_all.deb ... 458s Unpacking r-cran-xtable (1:1.8-4-2) ... 458s Selecting previously unselected package r-bioc-annotate. 458s Preparing to unpack .../179-r-bioc-annotate_1.84.0+dfsg-2_all.deb ... 458s Unpacking r-bioc-annotate (1.84.0+dfsg-2) ... 458s Selecting previously unselected package r-cran-generics. 458s Preparing to unpack .../180-r-cran-generics_0.1.3-1_all.deb ... 458s Unpacking r-cran-generics (0.1.3-1) ... 458s Selecting previously unselected package r-cran-magrittr. 458s Preparing to unpack .../181-r-cran-magrittr_2.0.3-1_s390x.deb ... 458s Unpacking r-cran-magrittr (2.0.3-1) ... 458s Selecting previously unselected package r-cran-utf8. 458s Preparing to unpack .../182-r-cran-utf8_1.2.4-1_s390x.deb ... 458s Unpacking r-cran-utf8 (1.2.4-1) ... 458s Selecting previously unselected package r-cran-pillar. 458s Preparing to unpack .../183-r-cran-pillar_1.10.1+dfsg-1_all.deb ... 458s Unpacking r-cran-pillar (1.10.1+dfsg-1) ... 458s Selecting previously unselected package r-cran-fansi. 458s Preparing to unpack .../184-r-cran-fansi_1.0.5-1_s390x.deb ... 458s Unpacking r-cran-fansi (1.0.5-1) ... 458s Selecting previously unselected package r-cran-tibble. 458s Preparing to unpack .../185-r-cran-tibble_3.2.1+dfsg-3_s390x.deb ... 458s Unpacking r-cran-tibble (3.2.1+dfsg-3) ... 458s Selecting previously unselected package r-cran-withr. 458s Preparing to unpack .../186-r-cran-withr_3.0.2+dfsg-1_all.deb ... 458s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 458s Selecting previously unselected package r-cran-tidyselect. 458s Preparing to unpack .../187-r-cran-tidyselect_1.2.1+dfsg-1_s390x.deb ... 458s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ... 459s Selecting previously unselected package r-cran-dplyr. 459s Preparing to unpack .../188-r-cran-dplyr_1.1.4-4_s390x.deb ... 459s Unpacking r-cran-dplyr (1.1.4-4) ... 459s Selecting previously unselected package r-cran-purrr. 459s Preparing to unpack .../189-r-cran-purrr_1.0.4-1_s390x.deb ... 459s Unpacking r-cran-purrr (1.0.4-1) ... 459s Selecting previously unselected package r-cran-stringi. 459s Preparing to unpack .../190-r-cran-stringi_1.8.4-1build1_s390x.deb ... 459s Unpacking r-cran-stringi (1.8.4-1build1) ... 459s Selecting previously unselected package r-cran-stringr. 459s Preparing to unpack .../191-r-cran-stringr_1.5.1-1_all.deb ... 459s Unpacking r-cran-stringr (1.5.1-1) ... 459s Selecting previously unselected package r-cran-tidyr. 459s Preparing to unpack .../192-r-cran-tidyr_1.3.1-1_s390x.deb ... 459s Unpacking r-cran-tidyr (1.3.1-1) ... 459s Selecting previously unselected package r-cran-dbplyr. 459s Preparing to unpack .../193-r-cran-dbplyr_2.5.0+dfsg-1_all.deb ... 459s Unpacking r-cran-dbplyr (2.5.0+dfsg-1) ... 459s Selecting previously unselected package r-cran-filelock. 459s Preparing to unpack .../194-r-cran-filelock_1.0.3-1_s390x.deb ... 459s Unpacking r-cran-filelock (1.0.3-1) ... 459s Selecting previously unselected package r-bioc-biocfilecache. 459s Preparing to unpack .../195-r-bioc-biocfilecache_2.14.0+dfsg-2_all.deb ... 459s Unpacking r-bioc-biocfilecache (2.14.0+dfsg-2) ... 459s Selecting previously unselected package r-cran-biocmanager. 459s Preparing to unpack .../196-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 459s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 459s Selecting previously unselected package r-bioc-biocversion. 459s Preparing to unpack .../197-r-bioc-biocversion_3.20.0-2_all.deb ... 459s Unpacking r-bioc-biocversion (3.20.0-2) ... 459s Selecting previously unselected package r-cran-rappdirs. 459s Preparing to unpack .../198-r-cran-rappdirs_0.3.3-1_s390x.deb ... 459s Unpacking r-cran-rappdirs (0.3.3-1) ... 459s Selecting previously unselected package r-cran-yaml. 459s Preparing to unpack .../199-r-cran-yaml_2.3.10-1_s390x.deb ... 459s Unpacking r-cran-yaml (2.3.10-1) ... 459s Selecting previously unselected package r-bioc-annotationhub. 459s Preparing to unpack .../200-r-bioc-annotationhub_3.14.0+dfsg-2_all.deb ... 459s Unpacking r-bioc-annotationhub (3.14.0+dfsg-2) ... 459s Selecting previously unselected package r-bioc-biocio. 459s Preparing to unpack .../201-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 459s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 459s Selecting previously unselected package r-cran-formatr. 459s Preparing to unpack .../202-r-cran-formatr_1.14-2_all.deb ... 459s Unpacking r-cran-formatr (1.14-2) ... 459s Selecting previously unselected package r-cran-lambda.r. 459s Preparing to unpack .../203-r-cran-lambda.r_1.2.4-2build1_all.deb ... 459s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 459s Selecting previously unselected package r-cran-futile.options. 459s Preparing to unpack .../204-r-cran-futile.options_1.0.1-3build1_all.deb ... 459s Unpacking r-cran-futile.options (1.0.1-3build1) ... 459s Selecting previously unselected package r-cran-futile.logger. 459s Preparing to unpack .../205-r-cran-futile.logger_1.4.3-4build1_all.deb ... 459s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 459s Selecting previously unselected package r-cran-snow. 459s Preparing to unpack .../206-r-cran-snow_1%3a0.4.4-2_all.deb ... 459s Unpacking r-cran-snow (1:0.4.4-2) ... 459s Selecting previously unselected package r-cran-codetools. 459s Preparing to unpack .../207-r-cran-codetools_0.2-20-1_all.deb ... 459s Unpacking r-cran-codetools (0.2-20-1) ... 459s Selecting previously unselected package r-cran-bh. 459s Preparing to unpack .../208-r-cran-bh_1.84.0-1_all.deb ... 459s Unpacking r-cran-bh (1.84.0-1) ... 459s Selecting previously unselected package r-bioc-biocparallel. 459s Preparing to unpack .../209-r-bioc-biocparallel_1.40.0-2_s390x.deb ... 459s Unpacking r-bioc-biocparallel (1.40.0-2) ... 459s Selecting previously unselected package r-cran-lattice. 459s Preparing to unpack .../210-r-cran-lattice_0.22-6-1_s390x.deb ... 459s Unpacking r-cran-lattice (0.22-6-1) ... 459s Selecting previously unselected package r-cran-matrix. 459s Preparing to unpack .../211-r-cran-matrix_1.7-3-1_s390x.deb ... 459s Unpacking r-cran-matrix (1.7-3-1) ... 459s Selecting previously unselected package r-cran-matrixstats. 459s Preparing to unpack .../212-r-cran-matrixstats_1.5.0-1_s390x.deb ... 459s Unpacking r-cran-matrixstats (1.5.0-1) ... 459s Selecting previously unselected package r-bioc-matrixgenerics. 459s Preparing to unpack .../213-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 459s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 459s Selecting previously unselected package r-cran-abind. 459s Preparing to unpack .../214-r-cran-abind_1.4-8-1_all.deb ... 459s Unpacking r-cran-abind (1.4-8-1) ... 459s Selecting previously unselected package r-bioc-s4arrays. 459s Preparing to unpack .../215-r-bioc-s4arrays_1.6.0+dfsg-2_s390x.deb ... 459s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 459s Selecting previously unselected package r-bioc-sparsearray. 459s Preparing to unpack .../216-r-bioc-sparsearray_1.6.2+dfsg-1_s390x.deb ... 459s Unpacking r-bioc-sparsearray (1.6.2+dfsg-1) ... 459s Selecting previously unselected package r-bioc-delayedarray. 459s Preparing to unpack .../217-r-bioc-delayedarray_0.32.0+dfsg-2_s390x.deb ... 459s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 459s Selecting previously unselected package r-cran-pkgkitten. 459s Preparing to unpack .../218-r-cran-pkgkitten_0.2.4-1_all.deb ... 459s Unpacking r-cran-pkgkitten (0.2.4-1) ... 459s Selecting previously unselected package r-cran-rcpp. 459s Preparing to unpack .../219-r-cran-rcpp_1.0.14-1_s390x.deb ... 459s Unpacking r-cran-rcpp (1.0.14-1) ... 459s Selecting previously unselected package r-bioc-sparsematrixstats. 459s Preparing to unpack .../220-r-bioc-sparsematrixstats_1.18.0+dfsg-2_s390x.deb ... 459s Unpacking r-bioc-sparsematrixstats (1.18.0+dfsg-2) ... 459s Selecting previously unselected package r-bioc-delayedmatrixstats. 459s Preparing to unpack .../221-r-bioc-delayedmatrixstats_1.28.1+ds-1_all.deb ... 459s Unpacking r-bioc-delayedmatrixstats (1.28.1+ds-1) ... 459s Selecting previously unselected package r-bioc-experimenthub. 459s Preparing to unpack .../222-r-bioc-experimenthub_2.14.0+ds-2_all.deb ... 459s Unpacking r-bioc-experimenthub (2.14.0+ds-2) ... 459s Selecting previously unselected package r-cran-survival. 459s Preparing to unpack .../223-r-cran-survival_3.8-3-1_s390x.deb ... 459s Unpacking r-cran-survival (3.8-3-1) ... 459s Selecting previously unselected package r-bioc-genefilter. 459s Preparing to unpack .../224-r-bioc-genefilter_1.88.0-2_s390x.deb ... 459s Unpacking r-bioc-genefilter (1.88.0-2) ... 459s Selecting previously unselected package r-bioc-genomicranges. 459s Preparing to unpack .../225-r-bioc-genomicranges_1.58.0+dfsg-2_s390x.deb ... 459s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 459s Selecting previously unselected package r-bioc-summarizedexperiment. 459s Preparing to unpack .../226-r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb ... 459s Unpacking r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 459s Selecting previously unselected package r-cran-bitops. 459s Preparing to unpack .../227-r-cran-bitops_1.0-9-1_s390x.deb ... 459s Unpacking r-cran-bitops (1.0-9-1) ... 459s Selecting previously unselected package r-bioc-rhtslib. 459s Preparing to unpack .../228-r-bioc-rhtslib_3.2.0+dfsg-2_s390x.deb ... 459s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 459s Selecting previously unselected package r-bioc-rsamtools. 459s Preparing to unpack .../229-r-bioc-rsamtools_2.22.0+dfsg-2_s390x.deb ... 459s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 459s Selecting previously unselected package r-bioc-genomicalignments. 459s Preparing to unpack .../230-r-bioc-genomicalignments_1.42.0-2_s390x.deb ... 459s Unpacking r-bioc-genomicalignments (1.42.0-2) ... 459s Selecting previously unselected package r-cran-rcurl. 459s Preparing to unpack .../231-r-cran-rcurl_1.98-1.16+dfsg-1_s390x.deb ... 459s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... 459s Selecting previously unselected package r-cran-rjson. 459s Preparing to unpack .../232-r-cran-rjson_0.2.23-1_s390x.deb ... 459s Unpacking r-cran-rjson (0.2.23-1) ... 459s Selecting previously unselected package r-cran-restfulr. 459s Preparing to unpack .../233-r-cran-restfulr_0.0.15-1_s390x.deb ... 459s Unpacking r-cran-restfulr (0.0.15-1) ... 459s Selecting previously unselected package r-bioc-rtracklayer. 459s Preparing to unpack .../234-r-bioc-rtracklayer_1.66.0-2_s390x.deb ... 459s Unpacking r-bioc-rtracklayer (1.66.0-2) ... 459s Selecting previously unselected package r-bioc-genomicfeatures. 459s Preparing to unpack .../235-r-bioc-genomicfeatures_1.58.0+dfsg-2_all.deb ... 459s Unpacking r-bioc-genomicfeatures (1.58.0+dfsg-2) ... 460s Selecting previously unselected package r-bioc-rhdf5lib. 460s Preparing to unpack .../236-r-bioc-rhdf5lib_1.28.0+dfsg-2build1_s390x.deb ... 460s Unpacking r-bioc-rhdf5lib (1.28.0+dfsg-2build1) ... 460s Selecting previously unselected package r-bioc-rhdf5filters. 460s Preparing to unpack .../237-r-bioc-rhdf5filters_1.18.0+dfsg-2_s390x.deb ... 460s Unpacking r-bioc-rhdf5filters (1.18.0+dfsg-2) ... 460s Selecting previously unselected package r-bioc-rhdf5. 460s Preparing to unpack .../238-r-bioc-rhdf5_2.50.2+dfsg-1build1_s390x.deb ... 460s Unpacking r-bioc-rhdf5 (2.50.2+dfsg-1build1) ... 460s Selecting previously unselected package r-bioc-hdf5array. 460s Preparing to unpack .../239-r-bioc-hdf5array_1.34.0-2build1_s390x.deb ... 460s Unpacking r-bioc-hdf5array (1.34.0-2build1) ... 460s Selecting previously unselected package r-bioc-singlecellexperiment. 460s Preparing to unpack .../240-r-bioc-singlecellexperiment_1.28.1+ds-2_all.deb ... 460s Unpacking r-bioc-singlecellexperiment (1.28.1+ds-2) ... 460s Selecting previously unselected package r-cran-runit. 460s Preparing to unpack .../241-r-cran-runit_0.4.33-1_all.deb ... 460s Unpacking r-cran-runit (0.4.33-1) ... 460s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 460s Setting up libgnutls-openssl27t64:s390x (3.8.9-2ubuntu2) ... 460s Setting up libpixman-1-0:s390x (0.44.0-3) ... 460s Setting up libsharpyuv0:s390x (1.5.0-0.1) ... 460s Setting up libncurses-dev:s390x (6.5+20250216-2) ... 460s Setting up libzstd-dev:s390x (1.5.6+dfsg-2) ... 460s Setting up hdf5-helpers (1.14.5+repack-3) ... 460s Setting up libxrender1:s390x (1:0.9.10-1.1build1) ... 460s Setting up libdatrie1:s390x (0.2.13-3build1) ... 460s Setting up libxcb-render0:s390x (1.17.0-2) ... 460s Setting up unzip (6.0-28ubuntu6) ... 460s Setting up x11-common (1:7.7+23ubuntu3) ... 460s Setting up libdeflate0:s390x (1.23-1) ... 460s Setting up libevent-2.1-7t64:s390x (2.1.12-stable-10) ... 460s Setting up libxcb-shm0:s390x (1.17.0-2) ... 460s Setting up libreadline-dev:s390x (8.2-6) ... 460s Setting up libgomp1:s390x (15-20250222-0ubuntu1) ... 460s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ... 460s Setting up libpcre2-16-0:s390x (10.45-1) ... 460s Setting up libaec0:s390x (1.1.3-1) ... 460s Setting up libpsl-dev:s390x (0.21.2-1.1build1) ... 460s Setting up libsnappy1v5:s390x (1.2.1-1) ... 460s Setting up zip (3.0-14ubuntu2) ... 460s Setting up libpcre2-32-0:s390x (10.45-1) ... 460s Setting up libblas3:s390x (3.12.1-2) ... 460s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode 460s Setting up libunbound8:s390x (1.22.0-1ubuntu1) ... 460s Setting up libtirpc-dev:s390x (1.3.4+ds-1.3) ... 460s Setting up libpkgconf3:s390x (1.8.1-4) ... 460s Setting up libgmpxx4ldbl:s390x (2:6.3.0+dfsg-3ubuntu1) ... 460s Setting up libgnutls-dane0t64:s390x (3.8.9-2ubuntu2) ... 460s Setting up libfreetype6:s390x (2.13.3+dfsg-1) ... 460s Setting up libgssrpc4t64:s390x (1.21.3-4ubuntu2) ... 460s Setting up libldap-dev:s390x (2.6.9+dfsg-1~exp2ubuntu1) ... 460s Setting up comerr-dev:s390x (2.1-1.47.2-1ubuntu1) ... 460s Setting up fonts-dejavu-mono (2.37-8) ... 460s Setting up libssl-dev:s390x (3.4.1-1ubuntu1) ... 460s Setting up libmpc3:s390x (1.3.1-1build2) ... 460s Setting up libtcl8.6:s390x (8.6.16+dfsg-1) ... 460s Setting up icu-devtools (76.1-1ubuntu2) ... 460s Setting up fonts-dejavu-core (2.37-8) ... 460s Setting up pkgconf-bin (1.8.1-4) ... 460s Setting up libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ... 460s Setting up libidn2-dev:s390x (2.3.7-2build2) ... 460s Setting up libgfortran5:s390x (15-20250222-0ubuntu1) ... 460s Setting up libwebp7:s390x (1.5.0-0.1) ... 460s Setting up liblzma-dev:s390x (5.6.4-1) ... 460s Setting up libubsan1:s390x (15-20250222-0ubuntu1) ... 460s Setting up zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 460s Setting up libpcre2-posix3:s390x (10.45-1) ... 460s Setting up libasan8:s390x (15-20250222-0ubuntu1) ... 460s Setting up libblosc1:s390x (1.21.5+ds-1build1) ... 460s Setting up libharfbuzz0b:s390x (10.2.0-1) ... 460s Setting up libthai-data (0.1.29-2build1) ... 460s Setting up libxss1:s390x (1:1.2.3-1build3) ... 460s Setting up libpaper2:s390x (2.2.5-0.3) ... 460s Setting up libisl23:s390x (0.27-1) ... 460s Setting up libtasn1-6-dev:s390x (4.20.0-2) ... 460s Setting up libdeflate-dev:s390x (1.23-1) ... 460s Setting up libicu-dev:s390x (76.1-1ubuntu2) ... 460s Setting up xdg-utils (1.2.1-2ubuntu1) ... 460s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode 460s Setting up libcc1-0:s390x (15-20250222-0ubuntu1) ... 460s Setting up libbrotli-dev:s390x (1.1.0-2build4) ... 460s Setting up libp11-kit-dev:s390x (0.25.5-2ubuntu3) ... 460s Setting up libblas-dev:s390x (3.12.1-2) ... 460s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so to provide /usr/lib/s390x-linux-gnu/libblas.so (libblas.so-s390x-linux-gnu) in auto mode 460s Setting up libsz2:s390x (1.1.3-1) ... 460s Setting up dctrl-tools (2.24-3build3) ... 460s Setting up libitm1:s390x (15-20250222-0ubuntu1) ... 460s Setting up libkadm5clnt-mit12:s390x (1.21.3-4ubuntu2) ... 460s Setting up libbz2-dev:s390x (1.0.8-6) ... 460s Setting up libjpeg8:s390x (8c-2ubuntu11) ... 460s Setting up libice6:s390x (2:1.1.1-1) ... 460s Setting up libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ... 460s Setting up liblapack3:s390x (3.12.1-2) ... 460s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode 460s Setting up libgmp-dev:s390x (2:6.3.0+dfsg-3ubuntu1) ... 460s Setting up libpcre2-dev:s390x (10.45-1) ... 460s Setting up nettle-dev:s390x (3.10.1-1) ... 460s Setting up libkdb5-10t64:s390x (1.21.3-4ubuntu2) ... 460s Setting up fontconfig-config (2.15.0-2ubuntu1) ... 460s Setting up libpng-dev:s390x (1.6.47-1) ... 460s Setting up libaec-dev:s390x (1.1.3-1) ... 460s Setting up libpaper-utils (2.2.5-0.3) ... 460s Setting up pkgconf:s390x (1.8.1-4) ... 460s Setting up libthai0:s390x (0.1.29-2build1) ... 460s Setting up liblapack-dev:s390x (3.12.1-2) ... 460s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode 460s Setting up libssh2-1-dev:s390x (1.11.1-1) ... 460s Setting up cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ... 460s Setting up cpp-14 (14.2.0-17ubuntu3) ... 460s Setting up libhdf5-310:s390x (1.14.5+repack-3) ... 460s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 460s Setting up libkadm5srv-mit12:s390x (1.21.3-4ubuntu2) ... 460s Setting up libfontconfig1:s390x (2.15.0-2ubuntu1) ... 460s Setting up libgcc-14-dev:s390x (14.2.0-17ubuntu3) ... 460s Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ... 460s Setting up libhdf5-fortran-310:s390x (1.14.5+repack-3) ... 460s Setting up libstdc++-14-dev:s390x (14.2.0-17ubuntu3) ... 460s Setting up libsm6:s390x (2:1.2.4-1) ... 460s Setting up krb5-multidev:s390x (1.21.3-4ubuntu2) ... 460s Setting up libhdf5-cpp-310:s390x (1.14.5+repack-3) ... 460s Setting up libgfortran-14-dev:s390x (14.2.0-17ubuntu3) ... 460s Setting up libgnutls28-dev:s390x (3.8.9-2ubuntu2) ... 460s Setting up libnghttp2-dev:s390x (1.64.0-1) ... 460s Setting up libhdf5-hl-310:s390x (1.14.5+repack-3) ... 460s Setting up fontconfig (2.15.0-2ubuntu1) ... 462s Regenerating fonts cache... done. 462s Setting up libxft2:s390x (2.3.6-1build1) ... 462s Setting up libboost1.83-dev:s390x (1.83.0-4.1ubuntu2) ... 462s Setting up cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 462s Setting up libtk8.6:s390x (8.6.16-1) ... 462s Setting up libpango-1.0-0:s390x (1.56.2-1) ... 462s Setting up libjpeg-dev:s390x (8c-2ubuntu11) ... 462s Setting up libcairo2:s390x (1.18.2-2) ... 462s Setting up libkrb5-dev:s390x (1.21.3-4ubuntu2) ... 462s Setting up gcc-14-s390x-linux-gnu (14.2.0-17ubuntu3) ... 462s Setting up gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 462s Setting up libxt6t64:s390x (1:1.2.1-1.2build1) ... 462s Setting up librtmp-dev:s390x (2.4+20151223.gitfa8646d.1-2build7) ... 462s Setting up g++-14-s390x-linux-gnu (14.2.0-17ubuntu3) ... 462s Setting up cpp (4:14.2.0-1ubuntu1) ... 462s Setting up libboost-dev:s390x (1.83.0.2ubuntu1) ... 462s Setting up libpangoft2-1.0-0:s390x (1.56.2-1) ... 462s Setting up libpangocairo-1.0-0:s390x (1.56.2-1) ... 462s Setting up libhdf5-hl-cpp-310:s390x (1.14.5+repack-3) ... 462s Setting up libhdf5-hl-fortran-310:s390x (1.14.5+repack-3) ... 462s Setting up gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu3) ... 462s Setting up g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 462s Setting up gcc-14 (14.2.0-17ubuntu3) ... 462s Setting up libcurl4-openssl-dev:s390x (8.12.1-3ubuntu1) ... 462s Setting up r-base-core (4.4.3-1) ... 462s Creating config file /etc/R/Renviron with new version 462s Setting up r-cran-crayon (1.5.3-1) ... 462s Setting up libhdf5-dev (1.14.5+repack-3) ... 462s update-alternatives: using /usr/lib/s390x-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/s390x-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode 462s Setting up r-cran-futile.options (1.0.1-3build1) ... 462s Setting up r-cran-lattice (0.22-6-1) ... 462s Setting up r-cran-formatr (1.14-2) ... 462s Setting up r-cran-xml (3.99-0.18-1) ... 462s Setting up g++-14 (14.2.0-17ubuntu3) ... 462s Setting up r-cran-rjson (0.2.23-1) ... 462s Setting up r-cran-r6 (2.6.1-1) ... 462s Setting up r-cran-pkgkitten (0.2.4-1) ... 462s Setting up gfortran-14 (14.2.0-17ubuntu3) ... 462s Setting up r-cran-magrittr (2.0.3-1) ... 462s Setting up r-cran-rappdirs (0.3.3-1) ... 462s Setting up r-cran-filelock (1.0.3-1) ... 462s Setting up r-bioc-genomeinfodbdata (1.2.13-2) ... 462s Setting up r-cran-littler (0.3.20-2) ... 462s Setting up r-cran-bh (1.84.0-1) ... 462s Setting up r-cran-rcpp (1.0.14-1) ... 462s Setting up r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 462s Setting up r-cran-codetools (0.2-20-1) ... 462s Setting up r-bioc-biocgenerics (0.52.0-2) ... 462s Setting up r-cran-rlang (1.1.5-1) ... 462s Setting up r-cran-matrixstats (1.5.0-1) ... 462s Setting up littler (0.3.20-2) ... 462s Setting up gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 462s Setting up r-bioc-matrixgenerics (1.18.1-1) ... 462s Setting up r-cran-sys (3.4.3-1) ... 462s Setting up r-cran-plogr (0.2.0-3build1) ... 462s Setting up r-cran-withr (3.0.2+dfsg-1) ... 462s Setting up r-cran-mime (0.12-2) ... 462s Setting up r-cran-generics (0.1.3-1) ... 462s Setting up r-cran-abind (1.4-8-1) ... 462s Setting up r-cran-yaml (2.3.10-1) ... 462s Setting up r-cran-lambda.r (1.2.4-2build1) ... 462s Setting up r-cran-dbi (1.2.3-1) ... 462s Setting up r-cran-fansi (1.0.5-1) ... 462s Setting up r-bioc-rhdf5lib (1.28.0+dfsg-2build1) ... 462s Setting up r-cran-snow (1:0.4.4-2) ... 462s Setting up r-cran-glue (1.8.0-1) ... 462s Setting up r-bioc-rhdf5filters (1.18.0+dfsg-2) ... 462s Setting up r-cran-bit (4.6.0+dfsg-1) ... 462s Setting up r-cran-xtable (1:1.8-4-2) ... 462s Setting up r-cran-cli (3.6.4-1) ... 462s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... 462s Setting up r-cran-bitops (1.0-9-1) ... 462s Setting up r-bioc-biocversion (3.20.0-2) ... 462s Setting up r-cran-bit64 (4.6.0-1-1ubuntu2) ... 462s Setting up r-cran-biocmanager (1.30.25+dfsg-1) ... 462s Setting up gcc (4:14.2.0-1ubuntu1) ... 462s Setting up r-bioc-zlibbioc (1.52.0+dfsg-2) ... 462s Setting up r-cran-askpass (1.2.1-1) ... 462s Setting up r-cran-fastmap (1.2.0-1) ... 462s Setting up r-cran-png (0.1-8-1build2) ... 462s Setting up r-bioc-biobase (2.66.0-2) ... 462s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ... 462s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 462s Setting up r-cran-utf8 (1.2.4-1) ... 462s Setting up r-cran-stringi (1.8.4-1build1) ... 462s Setting up r-cran-cpp11 (0.5.2-1) ... 462s Setting up r-bioc-s4vectors (0.44.0+dfsg-2) ... 462s Setting up r-cran-runit (0.4.33-1) ... 462s Setting up r-cran-futile.logger (1.4.3-4build1) ... 462s Setting up r-cran-matrix (1.7-3-1) ... 462s Setting up g++ (4:14.2.0-1ubuntu1) ... 462s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 462s Setting up r-cran-cachem (1.1.0-1) ... 462s Setting up build-essential (12.10ubuntu1) ... 462s Setting up r-bioc-iranges (2.40.1-2) ... 462s Setting up r-cran-rcurl (1.98-1.16+dfsg-1) ... 462s Setting up r-cran-restfulr (0.0.15-1) ... 462s Setting up r-bioc-sparsematrixstats (1.18.0+dfsg-2) ... 462s Setting up r-cran-vctrs (0.6.5-1) ... 462s Setting up r-cran-pillar (1.10.1+dfsg-1) ... 462s Setting up r-cran-openssl (2.3.2+dfsg-1) ... 462s Setting up r-bioc-s4arrays (1.6.0+dfsg-2) ... 462s Setting up r-cran-stringr (1.5.1-1) ... 462s Setting up r-bioc-biocparallel (1.40.0-2) ... 462s Setting up r-bioc-rhtslib (3.2.0+dfsg-2) ... 462s Setting up r-bioc-rhdf5 (2.50.2+dfsg-1build1) ... 462s Setting up r-cran-tibble (3.2.1+dfsg-3) ... 462s Setting up r-cran-survival (3.8-3-1) ... 462s Setting up r-bioc-biocio (1.16.0+dfsg-2) ... 462s Setting up gfortran (4:14.2.0-1ubuntu1) ... 462s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 462s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 462s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 462s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 462s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... 462s Setting up r-cran-httr (1.4.7+dfsg-1) ... 462s Setting up r-cran-memoise (2.0.1-1) ... 462s Setting up r-cran-purrr (1.0.4-1) ... 462s Setting up r-cran-blob (1.2.4-1) ... 462s Setting up r-bioc-xvector (0.46.0-2) ... 462s Setting up r-cran-dplyr (1.1.4-4) ... 462s Setting up r-cran-rsqlite (2.3.9-1) ... 462s Setting up r-base-dev (4.4.3-1) ... 462s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 462s Setting up r-bioc-sparsearray (1.6.2+dfsg-1) ... 462s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 462s Setting up r-cran-tidyr (1.3.1-1) ... 462s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 462s Setting up r-cran-dbplyr (2.5.0+dfsg-1) ... 462s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 462s Setting up r-bioc-hdf5array (1.34.0-2build1) ... 462s Setting up r-bioc-biocfilecache (2.14.0+dfsg-2) ... 462s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 462s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 462s Setting up r-bioc-delayedmatrixstats (1.28.1+ds-1) ... 462s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 462s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 462s Setting up r-bioc-keggrest (1.46.0+dfsg-2) ... 462s Setting up r-bioc-annotationdbi (1.68.0-2) ... 462s Setting up r-bioc-annotationhub (3.14.0+dfsg-2) ... 462s Setting up r-bioc-annotate (1.84.0+dfsg-2) ... 462s Setting up r-bioc-genefilter (1.88.0-2) ... 462s Setting up r-bioc-genomicalignments (1.42.0-2) ... 462s Setting up r-bioc-rtracklayer (1.66.0-2) ... 462s Setting up r-bioc-singlecellexperiment (1.28.1+ds-2) ... 462s Setting up r-bioc-genomicfeatures (1.58.0+dfsg-2) ... 462s Setting up r-bioc-experimenthub (2.14.0+ds-2) ... 462s Processing triggers for man-db (2.13.0-1) ... 463s Processing triggers for install-info (7.1.1-1) ... 464s Processing triggers for libc-bin (2.41-1ubuntu2) ... 465s autopkgtest [17:51:51]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 465s autopkgtest [17:51:51]: test pkg-r-autopkgtest: [----------------------- 465s Test: Try to load the R library HDF5Array 465s 465s R version 4.4.3 (2025-02-28) -- "Trophy Case" 465s Copyright (C) 2025 The R Foundation for Statistical Computing 465s Platform: s390x-ibm-linux-gnu 465s 465s R is free software and comes with ABSOLUTELY NO WARRANTY. 465s You are welcome to redistribute it under certain conditions. 465s Type 'license()' or 'licence()' for distribution details. 465s 465s R is a collaborative project with many contributors. 465s Type 'contributors()' for more information and 465s 'citation()' on how to cite R or R packages in publications. 465s 465s Type 'demo()' for some demos, 'help()' for on-line help, or 465s 'help.start()' for an HTML browser interface to help. 465s Type 'q()' to quit R. 465s 465s > library('HDF5Array') 465s Loading required package: SparseArray 465s Loading required package: Matrix 466s Loading required package: BiocGenerics 466s 466s Attaching package: ‘BiocGenerics’ 466s 466s The following objects are masked from ‘package:stats’: 466s 466s IQR, mad, sd, var, xtabs 466s 466s The following objects are masked from ‘package:base’: 466s 466s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 466s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 466s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 466s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 466s Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff, 466s table, tapply, union, unique, unsplit, which.max, which.min 466s 466s Loading required package: MatrixGenerics 466s Loading required package: matrixStats 466s 466s Attaching package: ‘MatrixGenerics’ 466s 466s The following objects are masked from ‘package:matrixStats’: 466s 466s colAlls, colAnyNAs, colAnys, colAvgsPerRowSet, colCollapse, 466s colCounts, colCummaxs, colCummins, colCumprods, colCumsums, 466s colDiffs, colIQRDiffs, colIQRs, colLogSumExps, colMadDiffs, 466s colMads, colMaxs, colMeans2, colMedians, colMins, colOrderStats, 466s colProds, colQuantiles, colRanges, colRanks, colSdDiffs, colSds, 466s colSums2, colTabulates, colVarDiffs, colVars, colWeightedMads, 466s colWeightedMeans, colWeightedMedians, colWeightedSds, 466s colWeightedVars, rowAlls, rowAnyNAs, rowAnys, rowAvgsPerColSet, 466s rowCollapse, rowCounts, rowCummaxs, rowCummins, rowCumprods, 466s rowCumsums, rowDiffs, rowIQRDiffs, rowIQRs, rowLogSumExps, 466s rowMadDiffs, rowMads, rowMaxs, rowMeans2, rowMedians, rowMins, 466s rowOrderStats, rowProds, rowQuantiles, rowRanges, rowRanks, 466s rowSdDiffs, rowSds, rowSums2, rowTabulates, rowVarDiffs, rowVars, 466s rowWeightedMads, rowWeightedMeans, rowWeightedMedians, 466s rowWeightedSds, rowWeightedVars 466s 466s Loading required package: S4Vectors 466s Loading required package: stats4 466s 466s Attaching package: ‘S4Vectors’ 466s 466s The following objects are masked from ‘package:Matrix’: 466s 466s expand, unname 466s 466s The following object is masked from ‘package:utils’: 466s 466s findMatches 466s 466s The following objects are masked from ‘package:base’: 466s 466s expand.grid, I, unname 466s 466s Loading required package: S4Arrays 466s Loading required package: abind 466s Loading required package: IRanges 467s 467s Attaching package: ‘S4Arrays’ 467s 467s The following object is masked from ‘package:abind’: 467s 467s abind 467s 467s The following object is masked from ‘package:base’: 467s 467s rowsum 467s 468s Loading required package: DelayedArray 468s 468s Attaching package: ‘DelayedArray’ 468s 468s The following objects are masked from ‘package:base’: 468s 468s apply, scale, sweep 468s 468s Loading required package: rhdf5 469s > 469s > 469s 469s Attaching package: ‘HDF5Array’ 469s 469s The following object is masked from ‘package:rhdf5’: 469s 469s h5ls 469s 469s Other tests are currently unsupported! 469s They will be progressively added. 469s autopkgtest [17:51:55]: test pkg-r-autopkgtest: -----------------------] 469s autopkgtest [17:51:55]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 469s pkg-r-autopkgtest PASS 470s autopkgtest [17:51:56]: @@@@@@@@@@@@@@@@@@@@ summary 470s pkg-r-autopkgtest PASS 476s nova [W] Using flock in prodstack6-s390x 476s Creating nova instance adt-plucky-s390x-r-bioc-hdf5array-20250315-174406-juju-7f2275-prod-proposed-migration-environment-2-8763a685-9dd4-4edb-84db-b21490440012 from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)... 476s nova [W] Timed out waiting for 883bd235-cec1-4ace-8a78-d52a22e6addc to get deleted.