0s autopkgtest [17:43:49]: starting date and time: 2025-03-15 17:43:49+0000
0s autopkgtest [17:43:49]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
0s autopkgtest [17:43:49]: host juju-7f2275-prod-proposed-migration-environment-20; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.uoj7ikon/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-bioc-gosemsim --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-20@bos03-s390x-28.secgroup --name adt-plucky-s390x-r-bioc-gosemsim-20250315-174349-juju-7f2275-prod-proposed-migration-environment-20-9bdb5b83-f714-40c6-a71c-b8024fc8e870 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-20 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
91s autopkgtest [17:45:20]: testbed dpkg architecture: s390x
92s autopkgtest [17:45:21]: testbed apt version: 2.9.33
92s autopkgtest [17:45:21]: @@@@@@@@@@@@@@@@@@@@ test bed setup
92s autopkgtest [17:45:21]: testbed release detected to be: None
93s autopkgtest [17:45:22]: updating testbed package index (apt update)
93s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB]
94s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
94s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
94s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
94s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB]
94s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB]
94s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB]
94s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [113 kB]
94s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1824 B]
94s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B]
94s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [320 kB]
94s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [13.4 kB]
94s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3776 B]
94s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [240 B]
94s Fetched 1073 kB in 1s (1163 kB/s)
95s Reading package lists...
96s Reading package lists...
96s Building dependency tree...
96s Reading state information...
96s Calculating upgrade...
96s Calculating upgrade...
96s The following packages were automatically installed and are no longer required:
96s libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64
96s linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic
96s linux-modules-6.11.0-8-generic linux-tools-6.11.0-8
96s linux-tools-6.11.0-8-generic
96s Use 'sudo apt autoremove' to remove them.
96s The following packages will be upgraded:
96s pinentry-curses python3-jinja2 strace
96s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
96s Need to get 652 kB of archives.
96s After this operation, 27.6 kB of additional disk space will be used.
96s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB]
97s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x pinentry-curses s390x 1.3.1-2ubuntu3 [42.9 kB]
97s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB]
97s Fetched 652 kB in 1s (1053 kB/s)
97s (Reading database ...
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81428 files and directories currently installed.)
97s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ...
97s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ...
97s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_s390x.deb ...
97s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ...
97s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ...
97s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ...
97s Setting up pinentry-curses (1.3.1-2ubuntu3) ...
97s Setting up python3-jinja2 (3.1.5-2ubuntu1) ...
97s Setting up strace (6.13+ds-1ubuntu1) ...
97s Processing triggers for man-db (2.13.0-1) ...
98s Reading package lists...
98s Building dependency tree...
98s Reading state information...
98s Solving dependencies...
98s The following packages will be REMOVED:
98s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64*
98s linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
98s linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8*
98s linux-tools-6.11.0-8-generic*
98s 0 upgraded, 0 newly installed, 9 to remove and 5 not upgraded.
98s After this operation, 167 MB disk space will be freed.
98s (Reading database ...
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(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81428 files and directories currently installed.)
98s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
98s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
98s Removing libpython3.12t64:s390x (3.12.9-1) ...
98s Removing libpython3.12-stdlib:s390x (3.12.9-1) ...
98s Removing libnsl2:s390x (1.3.0-3build3) ...
98s Removing libpython3.12-minimal:s390x (3.12.9-1) ...
99s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
99s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
99s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
99s Processing triggers for libc-bin (2.41-1ubuntu1) ...
99s (Reading database ...
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(Reading database ... 100%
(Reading database ... 56328 files and directories currently installed.)
99s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ...
99s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
100s autopkgtest [17:45:29]: upgrading testbed (apt dist-upgrade and autopurge)
100s Reading package lists...
100s Building dependency tree...
100s Reading state information...
100s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
100s Starting 2 pkgProblemResolver with broken count: 0
100s Done
100s Entering ResolveByKeep
100s
100s Calculating upgrade...
101s The following packages will be upgraded:
101s libc-bin libc-dev-bin libc6 libc6-dev locales
101s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
101s Need to get 9512 kB of archives.
101s After this operation, 8192 B of additional disk space will be used.
101s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6-dev s390x 2.41-1ubuntu2 [1678 kB]
101s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-dev-bin s390x 2.41-1ubuntu2 [24.3 kB]
101s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6 s390x 2.41-1ubuntu2 [2892 kB]
102s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-bin s390x 2.41-1ubuntu2 [671 kB]
102s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x locales all 2.41-1ubuntu2 [4246 kB]
102s Preconfiguring packages ...
102s Fetched 9512 kB in 1s (7967 kB/s)
102s (Reading database ...
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(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
102s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_s390x.deb ...
102s Unpacking libc6-dev:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
102s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_s390x.deb ...
102s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
102s Preparing to unpack .../libc6_2.41-1ubuntu2_s390x.deb ...
102s Unpacking libc6:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
102s Setting up libc6:s390x (2.41-1ubuntu2) ...
102s (Reading database ...
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(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
102s Preparing to unpack .../libc-bin_2.41-1ubuntu2_s390x.deb ...
102s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
102s Setting up libc-bin (2.41-1ubuntu2) ...
102s (Reading database ...
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(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
102s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ...
102s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
103s Setting up locales (2.41-1ubuntu2) ...
103s Generating locales (this might take a while)...
104s en_US.UTF-8... done
104s Generation complete.
104s Setting up libc-dev-bin (2.41-1ubuntu2) ...
104s Setting up libc6-dev:s390x (2.41-1ubuntu2) ...
104s Processing triggers for man-db (2.13.0-1) ...
104s Processing triggers for systemd (257.3-1ubuntu3) ...
105s Reading package lists...
105s Building dependency tree...
105s Reading state information...
105s Starting pkgProblemResolver with broken count: 0
105s Starting 2 pkgProblemResolver with broken count: 0
105s Done
106s Solving dependencies...
106s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
106s autopkgtest [17:45:35]: rebooting testbed after setup commands that affected boot
125s autopkgtest [17:45:54]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP Wed Mar 12 14:53:49 UTC 2025
128s autopkgtest [17:45:57]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-gosemsim
129s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-gosemsim 2.32.0-2 (dsc) [2221 B]
129s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-gosemsim 2.32.0-2 (tar) [611 kB]
129s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-gosemsim 2.32.0-2 (diff) [6008 B]
129s gpgv: Signature made Mon Jan 13 13:56:43 2025 UTC
129s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2
129s gpgv: issuer "crusoe@debian.org"
129s gpgv: Can't check signature: No public key
129s dpkg-source: warning: cannot verify inline signature for ./r-bioc-gosemsim_2.32.0-2.dsc: no acceptable signature found
130s autopkgtest [17:45:59]: testing package r-bioc-gosemsim version 2.32.0-2
131s autopkgtest [17:46:00]: build not needed
137s autopkgtest [17:46:06]: test pkg-r-autopkgtest: preparing testbed
137s Reading package lists...
137s Building dependency tree...
137s Reading state information...
137s Starting pkgProblemResolver with broken count: 0
137s Starting 2 pkgProblemResolver with broken count: 0
138s Done
138s The following NEW packages will be installed:
138s build-essential cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu
138s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
138s fonts-font-awesome fonts-glyphicons-halflings fonts-mathjax g++ g++-14
138s g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14 gcc-14-s390x-linux-gnu
138s gcc-s390x-linux-gnu gfortran gfortran-14 gfortran-14-s390x-linux-gnu
138s gfortran-s390x-linux-gnu icu-devtools javascript-common libasan8 libblas-dev
138s libblas3 libbz2-dev libcairo2 libcc1-0 libdatrie1 libdeflate-dev libdeflate0
138s libfontconfig1 libfreetype6 libgcc-14-dev libgfortran-14-dev libgfortran5
138s libgomp1 libgraphite2-3 libharfbuzz0b libice6 libicu-dev libisl23 libitm1
138s libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev
138s libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js
138s libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js
138s libjs-jquery-ui libjs-json libjs-mathjax libjs-microplugin.js
138s libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js
138s libjs-twitter-bootstrap-datepicker liblapack-dev liblapack3 liblua5.4-0
138s liblzma-dev libmpc3 libncurses-dev libpango-1.0-0 libpangocairo-1.0-0
138s libpangoft2-1.0-0 libpaper-utils libpaper2 libpcre2-16-0 libpcre2-32-0
138s libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev
138s libreadline-dev libsharpyuv0 libsm6 libstdc++-14-dev libtcl8.6 libthai-data
138s libthai0 libtiff6 libtirpc-dev libtk8.6 libubsan1 libwebp7 libxcb-render0
138s libxcb-shm0 libxft2 libxrender1 libxss1 libxt6t64 littler
138s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data
138s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev
138s r-bioc-annotationdbi r-bioc-annotationhub r-bioc-biobase
138s r-bioc-biocfilecache r-bioc-biocgenerics r-bioc-biocversion
138s r-bioc-biostrings r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-go.db
138s r-bioc-gosemsim r-bioc-iranges r-bioc-keggrest r-bioc-org.hs.eg.db
138s r-bioc-s4vectors r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc
138s r-cran-askpass r-cran-base64enc r-cran-biocmanager r-cran-bit r-cran-bit64
138s r-cran-bitops r-cran-blob r-cran-brio r-cran-bslib r-cran-cachem
138s r-cran-callr r-cran-catools r-cran-cli r-cran-clipr r-cran-commonmark
138s r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-dbi r-cran-dbplyr r-cran-desc
138s r-cran-diffobj r-cran-digest r-cran-dplyr r-cran-evaluate r-cran-fansi
138s r-cran-fastmap r-cran-filelock r-cran-fontawesome r-cran-fs r-cran-gdata
138s r-cran-generics r-cran-glue r-cran-gplots r-cran-gtools r-cran-highr
138s r-cran-hms r-cran-htmltools r-cran-httpuv r-cran-httr r-cran-jquerylib
138s r-cran-jsonlite r-cran-kernsmooth r-cran-knitr r-cran-later r-cran-lifecycle
138s r-cran-littler r-cran-magrittr r-cran-mass r-cran-memoise r-cran-mime
138s r-cran-openssl r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig
138s r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-png r-cran-praise
138s r-cran-prettyunits r-cran-processx r-cran-progress r-cran-promises r-cran-ps
138s r-cran-purrr r-cran-r.methodss3 r-cran-r.oo r-cran-r.utils r-cran-r6
138s r-cran-rappdirs r-cran-rcpp r-cran-readr r-cran-rlang r-cran-rmarkdown
138s r-cran-rocr r-cran-rprojroot r-cran-rsqlite r-cran-sass r-cran-shiny
138s r-cran-sourcetools r-cran-stringi r-cran-stringr r-cran-sys r-cran-testthat
138s r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tinytex r-cran-tzdb
138s r-cran-utf8 r-cran-vctrs r-cran-vroom r-cran-waldo r-cran-withr r-cran-xfun
138s r-cran-xtable r-cran-yaml r-cran-yulab.utils unzip x11-common xdg-utils zip
138s zlib1g-dev
138s 0 upgraded, 240 newly installed, 0 to remove and 0 not upgraded.
138s Need to get 361 MB of archives.
138s After this operation, 1411 MB of additional disk space will be used.
138s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libisl23 s390x 0.27-1 [704 kB]
138s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB]
138s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [9572 kB]
139s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14 s390x 14.2.0-17ubuntu3 [1028 B]
139s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [5556 B]
139s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x cpp s390x 4:14.2.0-1ubuntu1 [22.4 kB]
139s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libcc1-0 s390x 15-20250222-0ubuntu1 [49.2 kB]
139s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 15-20250222-0ubuntu1 [152 kB]
139s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libitm1 s390x 15-20250222-0ubuntu1 [31.2 kB]
139s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libasan8 s390x 15-20250222-0ubuntu1 [2970 kB]
140s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libubsan1 s390x 15-20250222-0ubuntu1 [1212 kB]
140s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-14-dev s390x 14.2.0-17ubuntu3 [1037 kB]
140s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [18.7 MB]
142s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14 s390x 14.2.0-17ubuntu3 [526 kB]
142s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1204 B]
142s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x gcc s390x 4:14.2.0-1ubuntu1 [5004 B]
142s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++-14-dev s390x 14.2.0-17ubuntu3 [2611 kB]
142s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [11.0 MB]
143s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14 s390x 14.2.0-17ubuntu3 [21.8 kB]
143s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x g++-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [956 B]
143s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x g++ s390x 4:14.2.0-1ubuntu1 [1080 B]
143s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x build-essential s390x 12.10ubuntu1 [4930 B]
143s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x dctrl-tools s390x 2.24-3build3 [106 kB]
143s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB]
143s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB]
143s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB]
143s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-2ubuntu1 [37.5 kB]
143s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-2ubuntu1 [150 kB]
143s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig s390x 2.15.0-2ubuntu1 [191 kB]
143s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB]
143s Get:31 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
143s Get:32 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB]
143s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 15-20250222-0ubuntu1 [620 kB]
143s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran-14-dev s390x 14.2.0-17ubuntu3 [654 kB]
144s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [10.3 MB]
145s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14 s390x 14.2.0-17ubuntu3 [13.6 kB]
145s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1012 B]
145s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran s390x 4:14.2.0-1ubuntu1 [1160 B]
145s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x icu-devtools s390x 76.1-1ubuntu2 [225 kB]
145s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x javascript-common all 12 [5216 B]
145s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.1-2 [252 kB]
145s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libblas-dev s390x 3.12.1-2 [254 kB]
145s Get:43 http://ftpmaster.internal/ubuntu plucky/main s390x libbz2-dev s390x 1.0.8-6 [39.1 kB]
145s Get:44 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB]
145s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB]
145s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B]
145s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB]
145s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB]
145s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB]
145s Get:50 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.23-1 [46.1 kB]
145s Get:51 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate-dev s390x 1.23-1 [52.2 kB]
145s Get:52 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB]
145s Get:53 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB]
145s Get:54 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB]
145s Get:55 http://ftpmaster.internal/ubuntu plucky/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB]
145s Get:56 http://ftpmaster.internal/ubuntu plucky/main s390x libicu-dev s390x 76.1-1ubuntu2 [12.2 MB]
146s Get:57 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB]
146s Get:58 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8-dev s390x 2.1.5-3ubuntu2 [281 kB]
146s Get:59 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B]
146s Get:60 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B]
146s Get:61 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B]
146s Get:62 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
146s Get:63 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-popper.js all 1.16.1+ds-6 [54.1 kB]
146s Get:64 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB]
146s Get:65 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-d3 all 3.5.17-4 [132 kB]
146s Get:66 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-es5-shim all 4.6.7-2 [39.8 kB]
146s Get:67 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB]
146s Get:68 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
146s Get:69 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB]
146s Get:70 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
146s Get:71 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B]
146s Get:72 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
146s Get:73 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB]
146s Get:74 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-json all 0~20221030+~1.0.8-1 [20.6 kB]
146s Get:75 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB]
146s Get:76 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.1-2 [2971 kB]
147s Get:77 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack-dev s390x 3.12.1-2 [5967 kB]
147s Get:78 http://ftpmaster.internal/ubuntu plucky/main s390x liblua5.4-0 s390x 5.4.7-1 [174 kB]
147s Get:79 http://ftpmaster.internal/ubuntu plucky/main s390x libncurses-dev s390x 6.5+20250216-2 [407 kB]
147s Get:80 http://ftpmaster.internal/ubuntu plucky/main s390x libthai-data all 0.1.29-2build1 [158 kB]
147s Get:81 http://ftpmaster.internal/ubuntu plucky/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB]
147s Get:82 http://ftpmaster.internal/ubuntu plucky/main s390x libpango-1.0-0 s390x 1.56.2-1 [253 kB]
147s Get:83 http://ftpmaster.internal/ubuntu plucky/main s390x libpangoft2-1.0-0 s390x 1.56.2-1 [50.2 kB]
147s Get:84 http://ftpmaster.internal/ubuntu plucky/main s390x libpangocairo-1.0-0 s390x 1.56.2-1 [28.2 kB]
147s Get:85 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB]
147s Get:86 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB]
147s Get:87 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-16-0 s390x 10.45-1 [259 kB]
147s Get:88 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-32-0 s390x 10.45-1 [245 kB]
147s Get:89 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-posix3 s390x 10.45-1 [7080 B]
147s Get:90 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-dev s390x 10.45-1 [899 kB]
148s Get:91 http://ftpmaster.internal/ubuntu plucky/main s390x libpkgconf3 s390x 1.8.1-4 [31.2 kB]
148s Get:92 http://ftpmaster.internal/ubuntu plucky/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB]
148s Get:93 http://ftpmaster.internal/ubuntu plucky/main s390x libpng-dev s390x 1.6.47-1 [278 kB]
148s Get:94 http://ftpmaster.internal/ubuntu plucky/main s390x libreadline-dev s390x 8.2-6 [187 kB]
148s Get:95 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB]
148s Get:96 http://ftpmaster.internal/ubuntu plucky/main s390x libsm6 s390x 2:1.2.4-1 [18.4 kB]
148s Get:97 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB]
148s Get:98 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB]
148s Get:99 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB]
148s Get:100 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB]
148s Get:101 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB]
148s Get:102 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B]
148s Get:103 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.16-1 [830 kB]
149s Get:104 http://ftpmaster.internal/ubuntu plucky/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB]
149s Get:105 http://ftpmaster.internal/ubuntu plucky/main s390x zip s390x 3.0-14ubuntu2 [187 kB]
149s Get:106 http://ftpmaster.internal/ubuntu plucky/main s390x unzip s390x 6.0-28ubuntu6 [186 kB]
149s Get:107 http://ftpmaster.internal/ubuntu plucky/main s390x xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
149s Get:108 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-core s390x 4.4.3-1 [28.6 MB]
157s Get:109 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-littler s390x 0.3.20-2 [95.0 kB]
157s Get:110 http://ftpmaster.internal/ubuntu plucky/universe s390x littler all 0.3.20-2 [2554 B]
157s Get:111 http://ftpmaster.internal/ubuntu plucky/universe s390x node-bootstrap-sass all 3.4.3-2 [187 kB]
157s Get:112 http://ftpmaster.internal/ubuntu plucky/universe s390x node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
157s Get:113 http://ftpmaster.internal/ubuntu plucky/universe s390x node-normalize.css all 8.0.1-5 [10.8 kB]
157s Get:114 http://ftpmaster.internal/ubuntu plucky/universe s390x pandoc-data all 3.1.11.1-3build1 [78.8 kB]
157s Get:115 http://ftpmaster.internal/ubuntu plucky/universe s390x pandoc s390x 3.1.11.1+ds-2 [52.5 MB]
168s Get:116 http://ftpmaster.internal/ubuntu plucky/main s390x liblzma-dev s390x 5.6.4-1 [183 kB]
168s Get:117 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf-bin s390x 1.8.1-4 [21.5 kB]
168s Get:118 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf s390x 1.8.1-4 [16.7 kB]
168s Get:119 http://ftpmaster.internal/ubuntu plucky/main s390x libtirpc-dev s390x 1.3.4+ds-1.3 [196 kB]
168s Get:120 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-dev all 4.4.3-1 [4176 B]
168s Get:121 http://ftpmaster.internal/ubuntu plucky/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
168s Get:122 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocgenerics all 0.52.0-2 [624 kB]
168s Get:123 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biobase s390x 2.66.0-2 [2339 kB]
169s Get:124 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-s4vectors s390x 0.44.0+dfsg-2 [2063 kB]
169s Get:125 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-iranges s390x 2.40.1-2 [2301 kB]
170s Get:126 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-dbi all 1.2.3-1 [853 kB]
170s Get:127 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bit s390x 4.6.0+dfsg-1 [471 kB]
170s Get:128 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bit64 s390x 4.6.0-1-1ubuntu2 [503 kB]
170s Get:129 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rlang s390x 1.1.5-1 [1713 kB]
171s Get:130 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cli s390x 3.6.4-1 [1379 kB]
171s Get:131 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-glue s390x 1.8.0-1 [164 kB]
171s Get:132 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
171s Get:133 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB]
171s Get:134 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-blob all 1.2.4-1 [49.8 kB]
171s Get:135 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fastmap s390x 1.2.0-1 [72.4 kB]
171s Get:136 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cachem s390x 1.1.0-1 [74.0 kB]
171s Get:137 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-memoise all 2.0.1-1 [53.9 kB]
171s Get:138 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB]
171s Get:139 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-plogr all 0.2.0-3build1 [15.1 kB]
171s Get:140 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cpp11 all 0.5.2-1 [233 kB]
171s Get:141 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rsqlite s390x 2.3.9-1 [1331 kB]
172s Get:142 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-curl s390x 6.2.1+dfsg-1ubuntu1 [196 kB]
172s Get:143 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-jsonlite s390x 1.9.1+dfsg-1 [447 kB]
172s Get:144 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mime s390x 0.12-2 [35.8 kB]
172s Get:145 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sys s390x 3.4.3-1 [45.2 kB]
172s Get:146 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-askpass s390x 1.2.1-1 [24.8 kB]
172s Get:147 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-openssl s390x 2.3.2+dfsg-1 [406 kB]
172s Get:148 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r6 all 2.6.1-1 [101 kB]
172s Get:149 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-httr all 1.4.7+dfsg-1 [459 kB]
172s Get:150 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-png s390x 0.1-8-1build2 [41.5 kB]
172s Get:151 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB]
172s Get:152 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-xvector s390x 0.46.0-2 [624 kB]
172s Get:153 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB]
172s Get:154 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB]
175s Get:155 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB]
176s Get:156 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-crayon all 1.5.3-1 [165 kB]
176s Get:157 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biostrings s390x 2.74.1+dfsg-2 [13.3 MB]
178s Get:158 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-keggrest all 1.46.0+dfsg-2 [183 kB]
178s Get:159 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-annotationdbi all 1.68.0-2 [4857 kB]
179s Get:160 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-generics all 0.1.3-1 [81.3 kB]
179s Get:161 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB]
179s Get:162 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB]
179s Get:163 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pillar all 1.10.1+dfsg-1 [453 kB]
179s Get:164 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fansi s390x 1.0.5-1 [615 kB]
179s Get:165 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tibble s390x 3.2.1+dfsg-3 [420 kB]
180s Get:166 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-withr all 3.0.2+dfsg-1 [214 kB]
180s Get:167 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tidyselect s390x 1.2.1+dfsg-1 [222 kB]
180s Get:168 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-dplyr s390x 1.1.4-4 [1537 kB]
180s Get:169 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-purrr s390x 1.0.4-1 [553 kB]
180s Get:170 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-stringi s390x 1.8.4-1build1 [917 kB]
180s Get:171 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-stringr all 1.5.1-1 [290 kB]
180s Get:172 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tidyr s390x 1.3.1-1 [1157 kB]
180s Get:173 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-dbplyr all 2.5.0+dfsg-1 [1233 kB]
181s Get:174 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-filelock s390x 1.0.3-1 [29.2 kB]
181s Get:175 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocfilecache all 2.14.0+dfsg-2 [300 kB]
181s Get:176 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB]
181s Get:177 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocversion all 3.20.0-2 [11.1 kB]
181s Get:178 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rappdirs s390x 0.3.3-1 [47.5 kB]
181s Get:179 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-yaml s390x 2.3.10-1 [113 kB]
181s Get:180 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-annotationhub all 3.14.0+dfsg-2 [447 kB]
181s Get:181 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-go.db all 3.20.0-2 [16.5 MB]
184s Get:182 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-digest s390x 0.6.37-1 [205 kB]
184s Get:183 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r.methodss3 all 1.8.2-1 [84.0 kB]
184s Get:184 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r.oo all 1.27.0-1 [979 kB]
184s Get:185 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r.utils all 2.13.0-1 [1423 kB]
184s Get:186 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fs s390x 1.6.5+dfsg-1 [245 kB]
185s Get:187 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-yulab.utils all 0.2.0-1 [120 kB]
185s Get:188 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
185s Get:189 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcpp s390x 1.0.14-1 [2003 kB]
185s Get:190 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-gosemsim s390x 2.32.0-2 [1101 kB]
185s Get:191 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-org.hs.eg.db all 3.20.0-3 [63.1 MB]
199s Get:192 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-base64enc s390x 0.1-3-3 [28.0 kB]
199s Get:193 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bitops s390x 1.0-9-1 [30.1 kB]
199s Get:194 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-brio s390x 1.1.5-1 [38.6 kB]
199s Get:195 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-htmltools s390x 0.5.8.1-1 [372 kB]
199s Get:196 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB]
199s Get:197 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sass s390x 0.4.9+dfsg-1 [1019 kB]
199s Get:198 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bslib all 0.8.0+dfsg-1 [4294 kB]
199s Get:199 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ps s390x 1.9.0-1 [408 kB]
199s Get:200 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-processx s390x 3.8.6-1 [364 kB]
200s Get:201 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-callr all 3.7.6-1 [458 kB]
200s Get:202 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-catools s390x 1.18.3-1 [207 kB]
200s Get:203 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-clipr all 0.8.0-1 [53.5 kB]
200s Get:204 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-commonmark s390x 1.9.2-2 [142 kB]
200s Get:205 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-desc all 1.4.3-1 [359 kB]
200s Get:206 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-diffobj s390x 0.3.5-1 [1115 kB]
201s Get:207 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-evaluate all 1.0.3-1 [114 kB]
201s Get:208 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fontawesome all 0.5.3-1 [1331 kB]
201s Get:209 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-gtools s390x 3.9.5-1 [340 kB]
201s Get:210 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-gdata all 3.0.1-1 [491 kB]
201s Get:211 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mass s390x 7.3-64-1 [1113 kB]
202s Get:212 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-kernsmooth s390x 2.23-26-1 [94.7 kB]
202s Get:213 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-gplots all 3.2.0-1 [484 kB]
202s Get:214 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-xfun s390x 0.51+dfsg-1 [574 kB]
202s Get:215 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-highr all 0.11+dfsg-1 [38.5 kB]
202s Get:216 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-hms all 1.1.3-1 [96.5 kB]
202s Get:217 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-later s390x 1.4.1+dfsg-1 [148 kB]
202s Get:218 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-promises s390x 1.3.2+dfsg-1 [296 kB]
202s Get:219 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-httpuv s390x 1.6.15+dfsg-1 [507 kB]
202s Get:220 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB]
203s Get:221 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-knitr all 1.49+dfsg-1 [859 kB]
204s Get:222 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgbuild all 1.4.6-1 [213 kB]
204s Get:223 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rprojroot all 2.0.4-2 [125 kB]
204s Get:224 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgload all 1.4.0-1 [247 kB]
204s Get:225 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-praise all 1.0.0-4build1 [20.3 kB]
204s Get:226 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-prettyunits all 1.2.0-1 [162 kB]
204s Get:227 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-progress all 1.2.3-1 [91.9 kB]
204s Get:228 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tzdb s390x 0.4.0-2 [514 kB]
204s Get:229 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-vroom s390x 1.6.5-1 [865 kB]
204s Get:230 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-readr s390x 2.1.5-1 [778 kB]
204s Get:231 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tinytex all 0.56-1 [148 kB]
204s Get:232 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-modernizr all 3.13.0-0.1 [101 kB]
204s Get:233 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-xtable all 1:1.8-4-2 [689 kB]
205s Get:234 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sourcetools s390x 0.1.7-1-1 [47.1 kB]
205s Get:235 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
205s Get:236 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-shiny all 1.10.0+dfsg-2 [3124 kB]
205s Get:237 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB]
206s Get:238 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rocr all 1.0-11-3 [456 kB]
206s Get:239 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-waldo all 0.6.1-2 [150 kB]
206s Get:240 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-testthat s390x 3.2.3-1 [1641 kB]
207s Preconfiguring packages ...
207s Fetched 361 MB in 1min 8s (5282 kB/s)
207s Selecting previously unselected package libisl23:s390x.
207s (Reading database ...
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207s Preparing to unpack .../000-libisl23_0.27-1_s390x.deb ...
207s Unpacking libisl23:s390x (0.27-1) ...
207s Selecting previously unselected package libmpc3:s390x.
207s Preparing to unpack .../001-libmpc3_1.3.1-1build2_s390x.deb ...
207s Unpacking libmpc3:s390x (1.3.1-1build2) ...
207s Selecting previously unselected package cpp-14-s390x-linux-gnu.
207s Preparing to unpack .../002-cpp-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
207s Unpacking cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
207s Selecting previously unselected package cpp-14.
207s Preparing to unpack .../003-cpp-14_14.2.0-17ubuntu3_s390x.deb ...
207s Unpacking cpp-14 (14.2.0-17ubuntu3) ...
207s Selecting previously unselected package cpp-s390x-linux-gnu.
207s Preparing to unpack .../004-cpp-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
207s Unpacking cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
207s Selecting previously unselected package cpp.
207s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_s390x.deb ...
207s Unpacking cpp (4:14.2.0-1ubuntu1) ...
207s Selecting previously unselected package libcc1-0:s390x.
207s Preparing to unpack .../006-libcc1-0_15-20250222-0ubuntu1_s390x.deb ...
207s Unpacking libcc1-0:s390x (15-20250222-0ubuntu1) ...
207s Selecting previously unselected package libgomp1:s390x.
207s Preparing to unpack .../007-libgomp1_15-20250222-0ubuntu1_s390x.deb ...
207s Unpacking libgomp1:s390x (15-20250222-0ubuntu1) ...
207s Selecting previously unselected package libitm1:s390x.
207s Preparing to unpack .../008-libitm1_15-20250222-0ubuntu1_s390x.deb ...
207s Unpacking libitm1:s390x (15-20250222-0ubuntu1) ...
207s Selecting previously unselected package libasan8:s390x.
207s Preparing to unpack .../009-libasan8_15-20250222-0ubuntu1_s390x.deb ...
207s Unpacking libasan8:s390x (15-20250222-0ubuntu1) ...
207s Selecting previously unselected package libubsan1:s390x.
207s Preparing to unpack .../010-libubsan1_15-20250222-0ubuntu1_s390x.deb ...
207s Unpacking libubsan1:s390x (15-20250222-0ubuntu1) ...
207s Selecting previously unselected package libgcc-14-dev:s390x.
207s Preparing to unpack .../011-libgcc-14-dev_14.2.0-17ubuntu3_s390x.deb ...
207s Unpacking libgcc-14-dev:s390x (14.2.0-17ubuntu3) ...
207s Selecting previously unselected package gcc-14-s390x-linux-gnu.
207s Preparing to unpack .../012-gcc-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
207s Unpacking gcc-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
207s Selecting previously unselected package gcc-14.
207s Preparing to unpack .../013-gcc-14_14.2.0-17ubuntu3_s390x.deb ...
207s Unpacking gcc-14 (14.2.0-17ubuntu3) ...
207s Selecting previously unselected package gcc-s390x-linux-gnu.
207s Preparing to unpack .../014-gcc-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
207s Unpacking gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
207s Selecting previously unselected package gcc.
207s Preparing to unpack .../015-gcc_4%3a14.2.0-1ubuntu1_s390x.deb ...
207s Unpacking gcc (4:14.2.0-1ubuntu1) ...
207s Selecting previously unselected package libstdc++-14-dev:s390x.
207s Preparing to unpack .../016-libstdc++-14-dev_14.2.0-17ubuntu3_s390x.deb ...
207s Unpacking libstdc++-14-dev:s390x (14.2.0-17ubuntu3) ...
208s Selecting previously unselected package g++-14-s390x-linux-gnu.
208s Preparing to unpack .../017-g++-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
208s Unpacking g++-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
208s Selecting previously unselected package g++-14.
208s Preparing to unpack .../018-g++-14_14.2.0-17ubuntu3_s390x.deb ...
208s Unpacking g++-14 (14.2.0-17ubuntu3) ...
208s Selecting previously unselected package g++-s390x-linux-gnu.
208s Preparing to unpack .../019-g++-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
208s Unpacking g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
208s Selecting previously unselected package g++.
208s Preparing to unpack .../020-g++_4%3a14.2.0-1ubuntu1_s390x.deb ...
208s Unpacking g++ (4:14.2.0-1ubuntu1) ...
208s Selecting previously unselected package build-essential.
208s Preparing to unpack .../021-build-essential_12.10ubuntu1_s390x.deb ...
208s Unpacking build-essential (12.10ubuntu1) ...
208s Selecting previously unselected package dctrl-tools.
208s Preparing to unpack .../022-dctrl-tools_2.24-3build3_s390x.deb ...
208s Unpacking dctrl-tools (2.24-3build3) ...
208s Selecting previously unselected package libfreetype6:s390x.
208s Preparing to unpack .../023-libfreetype6_2.13.3+dfsg-1_s390x.deb ...
208s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ...
208s Selecting previously unselected package fonts-dejavu-mono.
208s Preparing to unpack .../024-fonts-dejavu-mono_2.37-8_all.deb ...
208s Unpacking fonts-dejavu-mono (2.37-8) ...
208s Selecting previously unselected package fonts-dejavu-core.
208s Preparing to unpack .../025-fonts-dejavu-core_2.37-8_all.deb ...
208s Unpacking fonts-dejavu-core (2.37-8) ...
208s Selecting previously unselected package fontconfig-config.
208s Preparing to unpack .../026-fontconfig-config_2.15.0-2ubuntu1_s390x.deb ...
208s Unpacking fontconfig-config (2.15.0-2ubuntu1) ...
208s Selecting previously unselected package libfontconfig1:s390x.
208s Preparing to unpack .../027-libfontconfig1_2.15.0-2ubuntu1_s390x.deb ...
208s Unpacking libfontconfig1:s390x (2.15.0-2ubuntu1) ...
208s Selecting previously unselected package fontconfig.
208s Preparing to unpack .../028-fontconfig_2.15.0-2ubuntu1_s390x.deb ...
208s Unpacking fontconfig (2.15.0-2ubuntu1) ...
208s Selecting previously unselected package fonts-font-awesome.
208s Preparing to unpack .../029-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ...
208s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ...
208s Selecting previously unselected package fonts-glyphicons-halflings.
208s Preparing to unpack .../030-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ...
208s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
208s Selecting previously unselected package fonts-mathjax.
208s Preparing to unpack .../031-fonts-mathjax_2.7.9+dfsg-1_all.deb ...
208s Unpacking fonts-mathjax (2.7.9+dfsg-1) ...
208s Selecting previously unselected package libgfortran5:s390x.
208s Preparing to unpack .../032-libgfortran5_15-20250222-0ubuntu1_s390x.deb ...
208s Unpacking libgfortran5:s390x (15-20250222-0ubuntu1) ...
208s Selecting previously unselected package libgfortran-14-dev:s390x.
208s Preparing to unpack .../033-libgfortran-14-dev_14.2.0-17ubuntu3_s390x.deb ...
208s Unpacking libgfortran-14-dev:s390x (14.2.0-17ubuntu3) ...
208s Selecting previously unselected package gfortran-14-s390x-linux-gnu.
208s Preparing to unpack .../034-gfortran-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
208s Unpacking gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
208s Selecting previously unselected package gfortran-14.
208s Preparing to unpack .../035-gfortran-14_14.2.0-17ubuntu3_s390x.deb ...
208s Unpacking gfortran-14 (14.2.0-17ubuntu3) ...
208s Selecting previously unselected package gfortran-s390x-linux-gnu.
208s Preparing to unpack .../036-gfortran-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
208s Unpacking gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
208s Selecting previously unselected package gfortran.
208s Preparing to unpack .../037-gfortran_4%3a14.2.0-1ubuntu1_s390x.deb ...
208s Unpacking gfortran (4:14.2.0-1ubuntu1) ...
208s Selecting previously unselected package icu-devtools.
208s Preparing to unpack .../038-icu-devtools_76.1-1ubuntu2_s390x.deb ...
208s Unpacking icu-devtools (76.1-1ubuntu2) ...
208s Selecting previously unselected package javascript-common.
208s Preparing to unpack .../039-javascript-common_12_all.deb ...
208s Unpacking javascript-common (12) ...
208s Selecting previously unselected package libblas3:s390x.
208s Preparing to unpack .../040-libblas3_3.12.1-2_s390x.deb ...
208s Unpacking libblas3:s390x (3.12.1-2) ...
208s Selecting previously unselected package libblas-dev:s390x.
208s Preparing to unpack .../041-libblas-dev_3.12.1-2_s390x.deb ...
208s Unpacking libblas-dev:s390x (3.12.1-2) ...
208s Selecting previously unselected package libbz2-dev:s390x.
208s Preparing to unpack .../042-libbz2-dev_1.0.8-6_s390x.deb ...
208s Unpacking libbz2-dev:s390x (1.0.8-6) ...
208s Selecting previously unselected package libpixman-1-0:s390x.
208s Preparing to unpack .../043-libpixman-1-0_0.44.0-3_s390x.deb ...
208s Unpacking libpixman-1-0:s390x (0.44.0-3) ...
209s Selecting previously unselected package libxcb-render0:s390x.
209s Preparing to unpack .../044-libxcb-render0_1.17.0-2_s390x.deb ...
209s Unpacking libxcb-render0:s390x (1.17.0-2) ...
209s Selecting previously unselected package libxcb-shm0:s390x.
209s Preparing to unpack .../045-libxcb-shm0_1.17.0-2_s390x.deb ...
209s Unpacking libxcb-shm0:s390x (1.17.0-2) ...
209s Selecting previously unselected package libxrender1:s390x.
209s Preparing to unpack .../046-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ...
209s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ...
209s Selecting previously unselected package libcairo2:s390x.
209s Preparing to unpack .../047-libcairo2_1.18.2-2_s390x.deb ...
209s Unpacking libcairo2:s390x (1.18.2-2) ...
209s Selecting previously unselected package libdatrie1:s390x.
209s Preparing to unpack .../048-libdatrie1_0.2.13-3build1_s390x.deb ...
209s Unpacking libdatrie1:s390x (0.2.13-3build1) ...
209s Selecting previously unselected package libdeflate0:s390x.
209s Preparing to unpack .../049-libdeflate0_1.23-1_s390x.deb ...
209s Unpacking libdeflate0:s390x (1.23-1) ...
209s Selecting previously unselected package libdeflate-dev:s390x.
209s Preparing to unpack .../050-libdeflate-dev_1.23-1_s390x.deb ...
209s Unpacking libdeflate-dev:s390x (1.23-1) ...
209s Selecting previously unselected package libgraphite2-3:s390x.
209s Preparing to unpack .../051-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ...
209s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
209s Selecting previously unselected package libharfbuzz0b:s390x.
209s Preparing to unpack .../052-libharfbuzz0b_10.2.0-1_s390x.deb ...
209s Unpacking libharfbuzz0b:s390x (10.2.0-1) ...
209s Selecting previously unselected package x11-common.
209s Preparing to unpack .../053-x11-common_1%3a7.7+23ubuntu3_all.deb ...
209s Unpacking x11-common (1:7.7+23ubuntu3) ...
209s Selecting previously unselected package libice6:s390x.
209s Preparing to unpack .../054-libice6_2%3a1.1.1-1_s390x.deb ...
209s Unpacking libice6:s390x (2:1.1.1-1) ...
209s Selecting previously unselected package libicu-dev:s390x.
209s Preparing to unpack .../055-libicu-dev_76.1-1ubuntu2_s390x.deb ...
209s Unpacking libicu-dev:s390x (76.1-1ubuntu2) ...
209s Selecting previously unselected package libjpeg-turbo8:s390x.
209s Preparing to unpack .../056-libjpeg-turbo8_2.1.5-3ubuntu2_s390x.deb ...
209s Unpacking libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ...
209s Selecting previously unselected package libjpeg-turbo8-dev:s390x.
209s Preparing to unpack .../057-libjpeg-turbo8-dev_2.1.5-3ubuntu2_s390x.deb ...
209s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ...
209s Selecting previously unselected package libjpeg8:s390x.
209s Preparing to unpack .../058-libjpeg8_8c-2ubuntu11_s390x.deb ...
209s Unpacking libjpeg8:s390x (8c-2ubuntu11) ...
209s Selecting previously unselected package libjpeg8-dev:s390x.
209s Preparing to unpack .../059-libjpeg8-dev_8c-2ubuntu11_s390x.deb ...
209s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ...
209s Selecting previously unselected package libjpeg-dev:s390x.
209s Preparing to unpack .../060-libjpeg-dev_8c-2ubuntu11_s390x.deb ...
209s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ...
209s Selecting previously unselected package libjs-bootstrap.
209s Preparing to unpack .../061-libjs-bootstrap_3.4.1+dfsg-3_all.deb ...
209s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ...
209s Selecting previously unselected package libjs-popper.js.
209s Preparing to unpack .../062-libjs-popper.js_1.16.1+ds-6_all.deb ...
209s Unpacking libjs-popper.js (1.16.1+ds-6) ...
209s Selecting previously unselected package libjs-bootstrap4.
209s Preparing to unpack .../063-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ...
209s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ...
209s Selecting previously unselected package libjs-d3.
209s Preparing to unpack .../064-libjs-d3_3.5.17-4_all.deb ...
209s Unpacking libjs-d3 (3.5.17-4) ...
209s Selecting previously unselected package libjs-es5-shim.
209s Preparing to unpack .../065-libjs-es5-shim_4.6.7-2_all.deb ...
209s Unpacking libjs-es5-shim (4.6.7-2) ...
209s Selecting previously unselected package libjs-highlight.js.
209s Preparing to unpack .../066-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ...
209s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ...
209s Selecting previously unselected package libjs-jquery.
209s Preparing to unpack .../067-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ...
209s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
209s Selecting previously unselected package libjs-jquery-datatables.
209s Preparing to unpack .../068-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ...
209s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ...
209s Selecting previously unselected package libjs-sifter.js.
209s Preparing to unpack .../069-libjs-sifter.js_0.6.0+dfsg-3_all.deb ...
209s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ...
209s Selecting previously unselected package libjs-microplugin.js.
209s Preparing to unpack .../070-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ...
209s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ...
209s Selecting previously unselected package libjs-jquery-selectize.js.
209s Preparing to unpack .../071-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ...
209s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ...
209s Selecting previously unselected package libjs-jquery-ui.
209s Preparing to unpack .../072-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ...
209s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ...
209s Selecting previously unselected package libjs-json.
209s Preparing to unpack .../073-libjs-json_0~20221030+~1.0.8-1_all.deb ...
209s Unpacking libjs-json (0~20221030+~1.0.8-1) ...
209s Selecting previously unselected package libjs-prettify.
209s Preparing to unpack .../074-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ...
209s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ...
209s Selecting previously unselected package liblapack3:s390x.
209s Preparing to unpack .../075-liblapack3_3.12.1-2_s390x.deb ...
209s Unpacking liblapack3:s390x (3.12.1-2) ...
209s Selecting previously unselected package liblapack-dev:s390x.
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210s Selecting previously unselected package r-base-core.
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210s Selecting previously unselected package r-cran-littler.
210s Preparing to unpack .../108-r-cran-littler_0.3.20-2_s390x.deb ...
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210s Selecting previously unselected package node-bootstrap-sass.
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210s Selecting previously unselected package node-html5shiv.
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210s Selecting previously unselected package node-normalize.css.
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210s Selecting previously unselected package pandoc-data.
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210s Preparing to unpack .../114-pandoc_3.1.11.1+ds-2_s390x.deb ...
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211s Selecting previously unselected package liblzma-dev:s390x.
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211s Selecting previously unselected package pkgconf-bin.
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211s Selecting previously unselected package pkgconf:s390x.
211s Preparing to unpack .../117-pkgconf_1.8.1-4_s390x.deb ...
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211s Selecting previously unselected package libtirpc-dev:s390x.
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211s Selecting previously unselected package r-bioc-biocgenerics.
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211s Selecting previously unselected package r-bioc-s4vectors.
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211s Selecting previously unselected package r-bioc-iranges.
211s Preparing to unpack .../124-r-bioc-iranges_2.40.1-2_s390x.deb ...
211s Unpacking r-bioc-iranges (2.40.1-2) ...
211s Selecting previously unselected package r-cran-dbi.
211s Preparing to unpack .../125-r-cran-dbi_1.2.3-1_all.deb ...
211s Unpacking r-cran-dbi (1.2.3-1) ...
211s Selecting previously unselected package r-cran-bit.
211s Preparing to unpack .../126-r-cran-bit_4.6.0+dfsg-1_s390x.deb ...
211s Unpacking r-cran-bit (4.6.0+dfsg-1) ...
211s Selecting previously unselected package r-cran-bit64.
211s Preparing to unpack .../127-r-cran-bit64_4.6.0-1-1ubuntu2_s390x.deb ...
211s Unpacking r-cran-bit64 (4.6.0-1-1ubuntu2) ...
211s Selecting previously unselected package r-cran-rlang.
211s Preparing to unpack .../128-r-cran-rlang_1.1.5-1_s390x.deb ...
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212s Selecting previously unselected package r-cran-cli.
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212s Selecting previously unselected package r-cran-glue.
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212s Selecting previously unselected package r-cran-lifecycle.
212s Preparing to unpack .../131-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ...
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212s Selecting previously unselected package r-cran-vctrs.
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212s Selecting previously unselected package r-cran-blob.
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212s Selecting previously unselected package r-cran-fastmap.
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212s Selecting previously unselected package r-cran-cachem.
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212s Selecting previously unselected package r-cran-memoise.
212s Preparing to unpack .../136-r-cran-memoise_2.0.1-1_all.deb ...
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212s Selecting previously unselected package r-cran-pkgconfig.
212s Preparing to unpack .../137-r-cran-pkgconfig_2.0.3-2build1_all.deb ...
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212s Selecting previously unselected package r-cran-plogr.
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212s Selecting previously unselected package r-cran-cpp11.
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212s Selecting previously unselected package r-cran-rsqlite.
212s Preparing to unpack .../140-r-cran-rsqlite_2.3.9-1_s390x.deb ...
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212s Selecting previously unselected package r-cran-curl.
212s Preparing to unpack .../141-r-cran-curl_6.2.1+dfsg-1ubuntu1_s390x.deb ...
212s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ...
212s Selecting previously unselected package r-cran-jsonlite.
212s Preparing to unpack .../142-r-cran-jsonlite_1.9.1+dfsg-1_s390x.deb ...
212s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ...
212s Selecting previously unselected package r-cran-mime.
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212s Unpacking r-cran-mime (0.12-2) ...
212s Selecting previously unselected package r-cran-sys.
212s Preparing to unpack .../144-r-cran-sys_3.4.3-1_s390x.deb ...
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212s Selecting previously unselected package r-cran-askpass.
212s Preparing to unpack .../145-r-cran-askpass_1.2.1-1_s390x.deb ...
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212s Selecting previously unselected package r-cran-openssl.
212s Preparing to unpack .../146-r-cran-openssl_2.3.2+dfsg-1_s390x.deb ...
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212s Selecting previously unselected package r-cran-r6.
212s Preparing to unpack .../147-r-cran-r6_2.6.1-1_all.deb ...
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212s Selecting previously unselected package r-cran-httr.
212s Preparing to unpack .../148-r-cran-httr_1.4.7+dfsg-1_all.deb ...
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212s Selecting previously unselected package r-cran-png.
212s Preparing to unpack .../149-r-cran-png_0.1-8-1build2_s390x.deb ...
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212s Selecting previously unselected package r-bioc-zlibbioc.
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212s Selecting previously unselected package r-bioc-xvector.
212s Preparing to unpack .../151-r-bioc-xvector_0.46.0-2_s390x.deb ...
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212s Selecting previously unselected package r-bioc-ucsc.utils.
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212s Selecting previously unselected package r-bioc-genomeinfodbdata.
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212s Selecting previously unselected package r-bioc-genomeinfodb.
212s Preparing to unpack .../154-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ...
212s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ...
212s Selecting previously unselected package r-cran-crayon.
212s Preparing to unpack .../155-r-cran-crayon_1.5.3-1_all.deb ...
212s Unpacking r-cran-crayon (1.5.3-1) ...
212s Selecting previously unselected package r-bioc-biostrings.
212s Preparing to unpack .../156-r-bioc-biostrings_2.74.1+dfsg-2_s390x.deb ...
212s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ...
212s Selecting previously unselected package r-bioc-keggrest.
212s Preparing to unpack .../157-r-bioc-keggrest_1.46.0+dfsg-2_all.deb ...
212s Unpacking r-bioc-keggrest (1.46.0+dfsg-2) ...
212s Selecting previously unselected package r-bioc-annotationdbi.
212s Preparing to unpack .../158-r-bioc-annotationdbi_1.68.0-2_all.deb ...
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212s Selecting previously unselected package r-cran-generics.
212s Preparing to unpack .../159-r-cran-generics_0.1.3-1_all.deb ...
212s Unpacking r-cran-generics (0.1.3-1) ...
212s Selecting previously unselected package r-cran-magrittr.
212s Preparing to unpack .../160-r-cran-magrittr_2.0.3-1_s390x.deb ...
212s Unpacking r-cran-magrittr (2.0.3-1) ...
212s Selecting previously unselected package r-cran-utf8.
212s Preparing to unpack .../161-r-cran-utf8_1.2.4-1_s390x.deb ...
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212s Selecting previously unselected package r-cran-pillar.
212s Preparing to unpack .../162-r-cran-pillar_1.10.1+dfsg-1_all.deb ...
212s Unpacking r-cran-pillar (1.10.1+dfsg-1) ...
212s Selecting previously unselected package r-cran-fansi.
212s Preparing to unpack .../163-r-cran-fansi_1.0.5-1_s390x.deb ...
212s Unpacking r-cran-fansi (1.0.5-1) ...
212s Selecting previously unselected package r-cran-tibble.
212s Preparing to unpack .../164-r-cran-tibble_3.2.1+dfsg-3_s390x.deb ...
212s Unpacking r-cran-tibble (3.2.1+dfsg-3) ...
212s Selecting previously unselected package r-cran-withr.
212s Preparing to unpack .../165-r-cran-withr_3.0.2+dfsg-1_all.deb ...
212s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
212s Selecting previously unselected package r-cran-tidyselect.
212s Preparing to unpack .../166-r-cran-tidyselect_1.2.1+dfsg-1_s390x.deb ...
212s Unpacking r-cran-tidyselect (1.2.1+dfsg-1) ...
212s Selecting previously unselected package r-cran-dplyr.
212s Preparing to unpack .../167-r-cran-dplyr_1.1.4-4_s390x.deb ...
212s Unpacking r-cran-dplyr (1.1.4-4) ...
212s Selecting previously unselected package r-cran-purrr.
212s Preparing to unpack .../168-r-cran-purrr_1.0.4-1_s390x.deb ...
212s Unpacking r-cran-purrr (1.0.4-1) ...
212s Selecting previously unselected package r-cran-stringi.
212s Preparing to unpack .../169-r-cran-stringi_1.8.4-1build1_s390x.deb ...
212s Unpacking r-cran-stringi (1.8.4-1build1) ...
212s Selecting previously unselected package r-cran-stringr.
212s Preparing to unpack .../170-r-cran-stringr_1.5.1-1_all.deb ...
212s Unpacking r-cran-stringr (1.5.1-1) ...
212s Selecting previously unselected package r-cran-tidyr.
212s Preparing to unpack .../171-r-cran-tidyr_1.3.1-1_s390x.deb ...
212s Unpacking r-cran-tidyr (1.3.1-1) ...
212s Selecting previously unselected package r-cran-dbplyr.
212s Preparing to unpack .../172-r-cran-dbplyr_2.5.0+dfsg-1_all.deb ...
212s Unpacking r-cran-dbplyr (2.5.0+dfsg-1) ...
212s Selecting previously unselected package r-cran-filelock.
212s Preparing to unpack .../173-r-cran-filelock_1.0.3-1_s390x.deb ...
212s Unpacking r-cran-filelock (1.0.3-1) ...
212s Selecting previously unselected package r-bioc-biocfilecache.
212s Preparing to unpack .../174-r-bioc-biocfilecache_2.14.0+dfsg-2_all.deb ...
212s Unpacking r-bioc-biocfilecache (2.14.0+dfsg-2) ...
212s Selecting previously unselected package r-cran-biocmanager.
212s Preparing to unpack .../175-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ...
212s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ...
212s Selecting previously unselected package r-bioc-biocversion.
212s Preparing to unpack .../176-r-bioc-biocversion_3.20.0-2_all.deb ...
212s Unpacking r-bioc-biocversion (3.20.0-2) ...
212s Selecting previously unselected package r-cran-rappdirs.
212s Preparing to unpack .../177-r-cran-rappdirs_0.3.3-1_s390x.deb ...
212s Unpacking r-cran-rappdirs (0.3.3-1) ...
212s Selecting previously unselected package r-cran-yaml.
212s Preparing to unpack .../178-r-cran-yaml_2.3.10-1_s390x.deb ...
212s Unpacking r-cran-yaml (2.3.10-1) ...
212s Selecting previously unselected package r-bioc-annotationhub.
212s Preparing to unpack .../179-r-bioc-annotationhub_3.14.0+dfsg-2_all.deb ...
212s Unpacking r-bioc-annotationhub (3.14.0+dfsg-2) ...
212s Selecting previously unselected package r-bioc-go.db.
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213s Selecting previously unselected package r-cran-digest.
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213s Selecting previously unselected package r-cran-r.methodss3.
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213s Unpacking r-cran-r.methodss3 (1.8.2-1) ...
213s Selecting previously unselected package r-cran-r.oo.
213s Preparing to unpack .../183-r-cran-r.oo_1.27.0-1_all.deb ...
213s Unpacking r-cran-r.oo (1.27.0-1) ...
213s Selecting previously unselected package r-cran-r.utils.
213s Preparing to unpack .../184-r-cran-r.utils_2.13.0-1_all.deb ...
213s Unpacking r-cran-r.utils (2.13.0-1) ...
213s Selecting previously unselected package r-cran-fs.
213s Preparing to unpack .../185-r-cran-fs_1.6.5+dfsg-1_s390x.deb ...
213s Unpacking r-cran-fs (1.6.5+dfsg-1) ...
213s Selecting previously unselected package r-cran-yulab.utils.
213s Preparing to unpack .../186-r-cran-yulab.utils_0.2.0-1_all.deb ...
213s Unpacking r-cran-yulab.utils (0.2.0-1) ...
213s Selecting previously unselected package r-cran-pkgkitten.
213s Preparing to unpack .../187-r-cran-pkgkitten_0.2.4-1_all.deb ...
213s Unpacking r-cran-pkgkitten (0.2.4-1) ...
213s Selecting previously unselected package r-cran-rcpp.
213s Preparing to unpack .../188-r-cran-rcpp_1.0.14-1_s390x.deb ...
213s Unpacking r-cran-rcpp (1.0.14-1) ...
213s Selecting previously unselected package r-bioc-gosemsim.
213s Preparing to unpack .../189-r-bioc-gosemsim_2.32.0-2_s390x.deb ...
213s Unpacking r-bioc-gosemsim (2.32.0-2) ...
213s Selecting previously unselected package r-bioc-org.hs.eg.db.
213s Preparing to unpack .../190-r-bioc-org.hs.eg.db_3.20.0-3_all.deb ...
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215s Selecting previously unselected package r-cran-base64enc.
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215s Selecting previously unselected package r-cran-bitops.
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215s Selecting previously unselected package r-cran-brio.
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215s Selecting previously unselected package r-cran-htmltools.
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215s Selecting previously unselected package r-cran-jquerylib.
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215s Selecting previously unselected package r-cran-sass.
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215s Selecting previously unselected package r-cran-ps.
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215s Selecting previously unselected package r-cran-processx.
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215s Selecting previously unselected package r-cran-callr.
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215s Selecting previously unselected package r-cran-clipr.
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215s Selecting previously unselected package r-cran-diffobj.
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215s Selecting previously unselected package r-cran-fontawesome.
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215s Selecting previously unselected package r-cran-gtools.
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215s Selecting previously unselected package r-cran-gdata.
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215s Selecting previously unselected package r-cran-mass.
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215s Selecting previously unselected package r-cran-kernsmooth.
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215s Selecting previously unselected package r-cran-gplots.
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215s Selecting previously unselected package r-cran-xfun.
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215s Selecting previously unselected package r-cran-highr.
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215s Selecting previously unselected package r-cran-hms.
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215s Selecting previously unselected package r-cran-later.
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215s Selecting previously unselected package r-cran-promises.
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215s Selecting previously unselected package r-cran-httpuv.
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215s Selecting previously unselected package libjs-mathjax.
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215s Selecting previously unselected package r-cran-knitr.
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215s Unpacking r-cran-knitr (1.49+dfsg-1) ...
215s Selecting previously unselected package r-cran-pkgbuild.
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215s Selecting previously unselected package r-cran-rprojroot.
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215s Selecting previously unselected package r-cran-praise.
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215s Selecting previously unselected package r-cran-prettyunits.
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215s Selecting previously unselected package r-cran-progress.
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216s Setting up libjs-json (0~20221030+~1.0.8-1) ...
216s Setting up javascript-common (12) ...
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216s Setting up dctrl-tools (2.24-3build3) ...
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216s Setting up libpcre2-dev:s390x (10.45-1) ...
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216s Setting up cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
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216s Setting up libgfortran-14-dev:s390x (14.2.0-17ubuntu3) ...
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218s Setting up cpp (4:14.2.0-1ubuntu1) ...
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218s Setting up gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
218s Setting up g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
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218s Setting up r-base-core (4.4.3-1) ...
218s Creating config file /etc/R/Renviron with new version
218s Setting up r-cran-crayon (1.5.3-1) ...
218s Setting up r-cran-sourcetools (0.1.7-1-1) ...
218s Setting up r-cran-ps (1.9.0-1) ...
218s Setting up r-cran-clipr (0.8.0-1) ...
218s Setting up r-cran-commonmark (1.9.2-2) ...
218s Setting up g++-14 (14.2.0-17ubuntu3) ...
218s Setting up r-cran-r6 (2.6.1-1) ...
218s Setting up r-cran-pkgkitten (0.2.4-1) ...
218s Setting up gfortran-14 (14.2.0-17ubuntu3) ...
218s Setting up r-cran-magrittr (2.0.3-1) ...
218s Setting up r-cran-rappdirs (0.3.3-1) ...
218s Setting up r-cran-filelock (1.0.3-1) ...
218s Setting up r-bioc-genomeinfodbdata (1.2.13-2) ...
218s Setting up r-cran-littler (0.3.20-2) ...
218s Setting up r-cran-fs (1.6.5+dfsg-1) ...
218s Setting up r-cran-rcpp (1.0.14-1) ...
218s Setting up r-cran-curl (6.2.1+dfsg-1ubuntu1) ...
218s Setting up r-cran-brio (1.1.5-1) ...
218s Setting up r-cran-diffobj (0.3.5-1) ...
218s Setting up r-bioc-biocgenerics (0.52.0-2) ...
218s Setting up r-cran-rlang (1.1.5-1) ...
218s Setting up littler (0.3.20-2) ...
218s Setting up gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
218s Setting up r-cran-xfun (0.51+dfsg-1) ...
218s Setting up r-cran-sys (3.4.3-1) ...
218s Setting up r-cran-plogr (0.2.0-3build1) ...
218s Setting up r-cran-withr (3.0.2+dfsg-1) ...
218s Setting up r-cran-processx (3.8.6-1) ...
218s Setting up r-cran-mime (0.12-2) ...
218s Setting up r-cran-praise (1.0.0-4build1) ...
218s Setting up r-cran-generics (0.1.3-1) ...
218s Setting up r-cran-base64enc (0.1-3-3) ...
218s Setting up r-cran-digest (0.6.37-1) ...
218s Setting up r-cran-yaml (2.3.10-1) ...
218s Setting up r-cran-evaluate (1.0.3-1) ...
218s Setting up r-cran-dbi (1.2.3-1) ...
218s Setting up r-cran-highr (0.11+dfsg-1) ...
218s Setting up r-cran-prettyunits (1.2.0-1) ...
218s Setting up r-cran-fansi (1.0.5-1) ...
218s Setting up r-cran-mass (7.3-64-1) ...
218s Setting up r-cran-gtools (3.9.5-1) ...
218s Setting up r-cran-glue (1.8.0-1) ...
218s Setting up r-cran-bit (4.6.0+dfsg-1) ...
218s Setting up r-cran-xtable (1:1.8-4-2) ...
218s Setting up r-cran-cli (3.6.4-1) ...
218s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
218s Setting up r-cran-bitops (1.0-9-1) ...
218s Setting up r-bioc-biocversion (3.20.0-2) ...
218s Setting up r-cran-rprojroot (2.0.4-2) ...
218s Setting up r-cran-bit64 (4.6.0-1-1ubuntu2) ...
218s Setting up r-cran-biocmanager (1.30.25+dfsg-1) ...
218s Setting up gcc (4:14.2.0-1ubuntu1) ...
218s Setting up r-bioc-zlibbioc (1.52.0+dfsg-2) ...
218s Setting up r-cran-askpass (1.2.1-1) ...
218s Setting up r-cran-fastmap (1.2.0-1) ...
218s Setting up r-cran-png (0.1-8-1build2) ...
218s Setting up r-cran-r.methodss3 (1.8.2-1) ...
218s Setting up r-bioc-biobase (2.66.0-2) ...
218s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ...
218s Setting up r-cran-pkgconfig (2.0.3-2build1) ...
218s Setting up r-cran-utf8 (1.2.4-1) ...
218s Setting up r-cran-stringi (1.8.4-1build1) ...
218s Setting up r-cran-cpp11 (0.5.2-1) ...
218s Setting up r-bioc-s4vectors (0.44.0+dfsg-2) ...
218s Setting up r-cran-waldo (0.6.1-2) ...
218s Setting up r-cran-later (1.4.1+dfsg-1) ...
218s Setting up r-cran-htmltools (0.5.8.1-1) ...
218s Setting up r-cran-tinytex (0.56-1) ...
218s Setting up r-cran-kernsmooth (2.23-26-1) ...
218s Setting up r-cran-knitr (1.49+dfsg-1) ...
218s Setting up g++ (4:14.2.0-1ubuntu1) ...
218s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
218s Setting up r-cran-cachem (1.1.0-1) ...
218s Setting up r-cran-sass (0.4.9+dfsg-1) ...
218s Setting up build-essential (12.10ubuntu1) ...
218s Setting up r-cran-catools (1.18.3-1) ...
218s Setting up r-bioc-iranges (2.40.1-2) ...
218s Setting up r-cran-tzdb (0.4.0-2) ...
218s Setting up r-cran-gdata (3.0.1-1) ...
218s Setting up r-cran-vctrs (0.6.5-1) ...
218s Setting up r-cran-pillar (1.10.1+dfsg-1) ...
218s Setting up r-cran-openssl (2.3.2+dfsg-1) ...
218s Setting up r-cran-stringr (1.5.1-1) ...
218s Setting up r-cran-callr (3.7.6-1) ...
218s Setting up r-cran-desc (1.4.3-1) ...
218s Setting up r-cran-tibble (3.2.1+dfsg-3) ...
218s Setting up r-cran-fontawesome (0.5.3-1) ...
218s Setting up r-cran-r.oo (1.27.0-1) ...
218s Setting up r-cran-yulab.utils (0.2.0-1) ...
218s Setting up gfortran (4:14.2.0-1ubuntu1) ...
218s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
218s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
218s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
218s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
218s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ...
218s Setting up r-cran-tidyselect (1.2.1+dfsg-1) ...
218s Setting up r-cran-httr (1.4.7+dfsg-1) ...
218s Setting up r-cran-hms (1.1.3-1) ...
218s Setting up r-cran-memoise (2.0.1-1) ...
218s Setting up r-cran-promises (1.3.2+dfsg-1) ...
218s Setting up r-cran-purrr (1.0.4-1) ...
218s Setting up r-cran-blob (1.2.4-1) ...
218s Setting up r-bioc-xvector (0.46.0-2) ...
218s Setting up r-cran-pkgbuild (1.4.6-1) ...
218s Setting up r-cran-dplyr (1.1.4-4) ...
218s Setting up r-cran-gplots (3.2.0-1) ...
218s Setting up r-cran-rsqlite (2.3.9-1) ...
218s Setting up r-cran-progress (1.2.3-1) ...
218s Setting up r-cran-pkgload (1.4.0-1) ...
218s Setting up r-cran-r.utils (2.13.0-1) ...
218s Setting up r-cran-rocr (1.0-11-3) ...
218s Setting up r-cran-vroom (1.6.5-1) ...
218s Setting up r-base-dev (4.4.3-1) ...
218s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ...
218s Setting up r-cran-httpuv (1.6.15+dfsg-1) ...
218s Setting up r-cran-testthat (3.2.3-1) ...
218s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ...
218s Setting up r-cran-bslib (0.8.0+dfsg-1) ...
218s Setting up r-cran-readr (2.1.5-1) ...
218s Setting up r-cran-tidyr (1.3.1-1) ...
218s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
218s Setting up r-cran-dbplyr (2.5.0+dfsg-1) ...
218s Setting up r-bioc-biocfilecache (2.14.0+dfsg-2) ...
218s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ...
218s Setting up r-cran-shiny (1.10.0+dfsg-2) ...
218s Setting up r-cran-rmarkdown (2.29+dfsg-1) ...
218s Setting up r-bioc-keggrest (1.46.0+dfsg-2) ...
218s Setting up r-bioc-annotationdbi (1.68.0-2) ...
218s Setting up r-bioc-go.db (3.20.0-2) ...
218s Setting up r-bioc-annotationhub (3.14.0+dfsg-2) ...
218s Setting up r-bioc-org.hs.eg.db (3.20.0-3) ...
218s Setting up r-bioc-gosemsim (2.32.0-2) ...
218s Processing triggers for man-db (2.13.0-1) ...
219s Processing triggers for install-info (7.1.1-1) ...
219s Processing triggers for libc-bin (2.41-1ubuntu2) ...
221s autopkgtest [17:47:30]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
221s autopkgtest [17:47:30]: test pkg-r-autopkgtest: [-----------------------
221s Test: Try to load the R library GOSemSim
221s
221s R version 4.4.3 (2025-02-28) -- "Trophy Case"
221s Copyright (C) 2025 The R Foundation for Statistical Computing
221s Platform: s390x-ibm-linux-gnu
221s
221s R is free software and comes with ABSOLUTELY NO WARRANTY.
221s You are welcome to redistribute it under certain conditions.
221s Type 'license()' or 'licence()' for distribution details.
221s
221s R is a collaborative project with many contributors.
221s Type 'contributors()' for more information and
221s 'citation()' on how to cite R or R packages in publications.
221s
221s Type 'demo()' for some demos, 'help()' for on-line help, or
221s 'help.start()' for an HTML browser interface to help.
221s Type 'q()' to quit R.
221s
221s > library('GOSemSim')
224s
224s GOSemSim v2.32.0 Learn more at https://yulab-smu.top/contribution-knowledge-mining/
224s
224s Please cite:
224s
224s Guangchuang Yu. Gene Ontology Semantic Similarity Analysis Using
224s GOSemSim. In: Kidder B. (eds) Stem Cell Transcriptional Networks.
224s Methods in Molecular Biology. 2020, 2117:207-215. Humana, New York, NY.
224s >
224s >
224s Other tests are currently unsupported!
224s They will be progressively added.
224s autopkgtest [17:47:33]: test pkg-r-autopkgtest: -----------------------]
225s pkg-r-autopkgtest PASS
225s autopkgtest [17:47:34]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - -
225s autopkgtest [17:47:34]: @@@@@@@@@@@@@@@@@@@@ summary
225s pkg-r-autopkgtest PASS
242s nova [W] Using flock in prodstack6-s390x
242s Creating nova instance adt-plucky-s390x-r-bioc-gosemsim-20250315-174349-juju-7f2275-prod-proposed-migration-environment-20-9bdb5b83-f714-40c6-a71c-b8024fc8e870 from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)...
242s nova [W] Timed out waiting for a73d57f5-a64e-4a01-aac0-bc808f9922de to get deleted.