0s autopkgtest [17:43:07]: starting date and time: 2025-03-15 17:43:07+0000
  0s autopkgtest [17:43:07]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  0s autopkgtest [17:43:07]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.jnw50c72/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-bioc-fmcsr --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-s390x-22.secgroup --name adt-plucky-s390x-r-bioc-fmcsr-20250315-174307-juju-7f2275-prod-proposed-migration-environment-2-ab69a937-1959-44f5-870c-40e86592c1f3 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
123s autopkgtest [17:45:10]: testbed dpkg architecture: s390x
123s autopkgtest [17:45:10]: testbed apt version: 2.9.33
123s autopkgtest [17:45:10]: @@@@@@@@@@@@@@@@@@@@ test bed setup
124s autopkgtest [17:45:11]: testbed release detected to be: None
125s autopkgtest [17:45:12]: updating testbed package index (apt update)
125s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB]
125s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
125s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
125s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
125s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB]
126s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB]
126s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB]
126s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [113 kB]
126s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1824 B]
126s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B]
126s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [320 kB]
126s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [13.4 kB]
126s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3776 B]
126s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [240 B]
126s Fetched 1073 kB in 1s (726 kB/s)
127s Reading package lists...
128s Reading package lists...
128s Building dependency tree...
128s Reading state information...
128s Calculating upgrade...
128s Calculating upgrade...
128s The following packages were automatically installed and are no longer required:
128s   libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64
128s   linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic
128s   linux-modules-6.11.0-8-generic linux-tools-6.11.0-8
128s   linux-tools-6.11.0-8-generic
128s Use 'sudo apt autoremove' to remove them.
128s The following packages will be upgraded:
128s   pinentry-curses python3-jinja2 strace
128s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
128s Need to get 652 kB of archives.
128s After this operation, 27.6 kB of additional disk space will be used.
128s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB]
129s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x pinentry-curses s390x 1.3.1-2ubuntu3 [42.9 kB]
129s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB]
129s Fetched 652 kB in 1s (814 kB/s)
130s (Reading database ... 
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(Reading database ... 81428 files and directories currently installed.)
130s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ...
130s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ...
130s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_s390x.deb ...
130s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ...
130s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ...
130s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ...
130s Setting up pinentry-curses (1.3.1-2ubuntu3) ...
130s Setting up python3-jinja2 (3.1.5-2ubuntu1) ...
130s Setting up strace (6.13+ds-1ubuntu1) ...
130s Processing triggers for man-db (2.13.0-1) ...
130s Reading package lists...
131s Building dependency tree...
131s Reading state information...
131s Solving dependencies...
131s The following packages will be REMOVED:
131s   libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64*
131s   linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
131s   linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8*
131s   linux-tools-6.11.0-8-generic*
131s 0 upgraded, 0 newly installed, 9 to remove and 5 not upgraded.
131s After this operation, 167 MB disk space will be freed.
131s (Reading database ... 
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(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81428 files and directories currently installed.)
131s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
131s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
131s Removing libpython3.12t64:s390x (3.12.9-1) ...
131s Removing libpython3.12-stdlib:s390x (3.12.9-1) ...
131s Removing libnsl2:s390x (1.3.0-3build3) ...
131s Removing libpython3.12-minimal:s390x (3.12.9-1) ...
131s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
131s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
132s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
132s Processing triggers for libc-bin (2.41-1ubuntu1) ...
132s (Reading database ... 
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(Reading database ... 56328 files and directories currently installed.)
132s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ...
132s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
132s autopkgtest [17:45:19]: upgrading testbed (apt dist-upgrade and autopurge)
133s Reading package lists...
133s Building dependency tree...
133s Reading state information...
133s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
133s Starting 2 pkgProblemResolver with broken count: 0
133s Done
133s Entering ResolveByKeep
133s 
133s Calculating upgrade...
134s The following packages will be upgraded:
134s   libc-bin libc-dev-bin libc6 libc6-dev locales
134s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
134s Need to get 9512 kB of archives.
134s After this operation, 8192 B of additional disk space will be used.
134s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6-dev s390x 2.41-1ubuntu2 [1678 kB]
135s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-dev-bin s390x 2.41-1ubuntu2 [24.3 kB]
135s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6 s390x 2.41-1ubuntu2 [2892 kB]
137s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-bin s390x 2.41-1ubuntu2 [671 kB]
137s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x locales all 2.41-1ubuntu2 [4246 kB]
140s Preconfiguring packages ...
140s Fetched 9512 kB in 6s (1490 kB/s)
140s (Reading database ... 
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(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
140s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_s390x.deb ...
140s Unpacking libc6-dev:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
140s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_s390x.deb ...
140s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
140s Preparing to unpack .../libc6_2.41-1ubuntu2_s390x.deb ...
140s Unpacking libc6:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
141s Setting up libc6:s390x (2.41-1ubuntu2) ...
141s (Reading database ... 
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(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
141s Preparing to unpack .../libc-bin_2.41-1ubuntu2_s390x.deb ...
141s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
141s Setting up libc-bin (2.41-1ubuntu2) ...
141s (Reading database ... 
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(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
141s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ...
141s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
141s Setting up locales (2.41-1ubuntu2) ...
141s Generating locales (this might take a while)...
142s   en_US.UTF-8... done
142s Generation complete.
142s Setting up libc-dev-bin (2.41-1ubuntu2) ...
142s Setting up libc6-dev:s390x (2.41-1ubuntu2) ...
142s Processing triggers for man-db (2.13.0-1) ...
143s Processing triggers for systemd (257.3-1ubuntu3) ...
144s Reading package lists...
144s Building dependency tree...
144s Reading state information...
144s Starting pkgProblemResolver with broken count: 0
144s Starting 2 pkgProblemResolver with broken count: 0
144s Done
144s Solving dependencies...
144s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
145s autopkgtest [17:45:32]: rebooting testbed after setup commands that affected boot
166s autopkgtest [17:45:53]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP Wed Mar 12 14:53:49 UTC 2025
168s autopkgtest [17:45:55]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-fmcsr
170s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-fmcsr 1.48.0+dfsg-2 (dsc) [2144 B]
170s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-fmcsr 1.48.0+dfsg-2 (tar) [38.5 kB]
170s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-fmcsr 1.48.0+dfsg-2 (diff) [6012 B]
170s gpgv: Signature made Sun Jan 12 02:36:41 2025 UTC
170s gpgv:                using RSA key 724D609337113C710550D7473C26763F6C67E6E2
170s gpgv:                issuer "crusoe@debian.org"
170s gpgv: Can't check signature: No public key
170s dpkg-source: warning: cannot verify inline signature for ./r-bioc-fmcsr_1.48.0+dfsg-2.dsc: no acceptable signature found
170s autopkgtest [17:45:57]: testing package r-bioc-fmcsr version 1.48.0+dfsg-2
171s autopkgtest [17:45:58]: build not needed
172s autopkgtest [17:45:59]: test pkg-r-autopkgtest: preparing testbed
173s Reading package lists...
173s Building dependency tree...
173s Reading state information...
173s Starting pkgProblemResolver with broken count: 0
173s Starting 2 pkgProblemResolver with broken count: 0
173s Done
173s The following NEW packages will be installed:
173s   build-essential cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu
173s   dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
173s   fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax
173s   g++ g++-14 g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14
173s   gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-14
173s   gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools
173s   javascript-common libasan8 libbibtex-parser-perl libblas-dev libblas3
173s   libboost-dev libboost1.83-dev libbz2-dev libcairo-gobject2 libcairo2
173s   libcc1-0 libdatrie1 libdeflate-dev libdeflate0 libfontconfig1 libfreetype6
173s   libgcc-14-dev libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgfortran-14-dev
173s   libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libice6 libicu-dev
173s   libio-string-perl libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8
173s   libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4
173s   libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery
173s   libjs-jquery-datatables libjs-jquery-datatables-extensions
173s   libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr
173s   libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js
173s   libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker
173s   libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblua5.4-0
173s   liblzma-dev libmpc3 libmpfi0 libncurses-dev libpango-1.0-0
173s   libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libpcre2-16-0
173s   libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3
173s   libpng-dev libpotrace0 libptexenc1 libreadline-dev librsvg2-2 libsharpyuv0
173s   libsm6 libstdc++-14-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5
173s   libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libubsan1 libwebp7
173s   libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4
173s   libxrender1 libxss1 libxt6t64 libzzip-0-13t64 littler node-bootstrap-sass
173s   node-html5shiv node-normalize.css pandoc pandoc-data pkg-r-autopkgtest
173s   pkgconf pkgconf-bin r-base-core r-base-dev r-bioc-biocgenerics
173s   r-bioc-biocstyle r-bioc-biocversion r-bioc-chemminer r-bioc-fmcsr
173s   r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bitops r-cran-bookdown
173s   r-cran-bslib r-cran-cachem r-cran-cli r-cran-codetools r-cran-colorspace
173s   r-cran-commonmark r-cran-crayon r-cran-crosstalk r-cran-dbi r-cran-digest
173s   r-cran-dt r-cran-evaluate r-cran-fansi r-cran-farver r-cran-fastmap
173s   r-cran-fontawesome r-cran-fs r-cran-ggplot2 r-cran-glue r-cran-gridextra
173s   r-cran-gtable r-cran-highr r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv
173s   r-cran-isoband r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling
173s   r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler
173s   r-cran-magrittr r-cran-mass r-cran-matrix r-cran-memoise r-cran-mgcv
173s   r-cran-mime r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgconfig
173s   r-cran-pkgkitten r-cran-png r-cran-promises r-cran-r6 r-cran-rappdirs
173s   r-cran-rcolorbrewer r-cran-rcpp r-cran-rcurl r-cran-rjson r-cran-rlang
173s   r-cran-rmarkdown r-cran-rsvg r-cran-runit r-cran-sass r-cran-scales
173s   r-cran-shiny r-cran-sourcetools r-cran-stringi r-cran-tibble r-cran-tinytex
173s   r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-withr r-cran-xfun
173s   r-cran-xtable r-cran-yaml t1utils tex-common texlive-base
173s   texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common
173s   xdg-utils zip zlib1g-dev
173s 0 upgraded, 235 newly installed, 0 to remove and 0 not upgraded.
173s Need to get 377 MB of archives.
173s After this operation, 1343 MB of additional disk space will be used.
173s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libisl23 s390x 0.27-1 [704 kB]
174s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB]
174s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [9572 kB]
185s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14 s390x 14.2.0-17ubuntu3 [1028 B]
185s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [5556 B]
185s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x cpp s390x 4:14.2.0-1ubuntu1 [22.4 kB]
185s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libcc1-0 s390x 15-20250222-0ubuntu1 [49.2 kB]
185s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 15-20250222-0ubuntu1 [152 kB]
185s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libitm1 s390x 15-20250222-0ubuntu1 [31.2 kB]
185s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libasan8 s390x 15-20250222-0ubuntu1 [2970 kB]
188s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libubsan1 s390x 15-20250222-0ubuntu1 [1212 kB]
190s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-14-dev s390x 14.2.0-17ubuntu3 [1037 kB]
191s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [18.7 MB]
208s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14 s390x 14.2.0-17ubuntu3 [526 kB]
208s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1204 B]
208s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x gcc s390x 4:14.2.0-1ubuntu1 [5004 B]
208s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++-14-dev s390x 14.2.0-17ubuntu3 [2611 kB]
211s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [11.0 MB]
220s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14 s390x 14.2.0-17ubuntu3 [21.8 kB]
220s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x g++-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [956 B]
220s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x g++ s390x 4:14.2.0-1ubuntu1 [1080 B]
220s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x build-essential s390x 12.10ubuntu1 [4930 B]
220s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x dctrl-tools s390x 2.24-3build3 [106 kB]
220s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB]
220s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB]
221s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB]
221s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-2ubuntu1 [37.5 kB]
221s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-2ubuntu1 [150 kB]
221s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig s390x 2.15.0-2ubuntu1 [191 kB]
222s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB]
222s Get:31 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
222s Get:32 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-lmodern all 2.005-1 [4799 kB]
226s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB]
228s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 15-20250222-0ubuntu1 [620 kB]
228s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran-14-dev s390x 14.2.0-17ubuntu3 [654 kB]
229s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [10.3 MB]
238s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14 s390x 14.2.0-17ubuntu3 [13.6 kB]
238s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1012 B]
238s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran s390x 4:14.2.0-1ubuntu1 [1160 B]
238s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x icu-devtools s390x 76.1-1ubuntu2 [225 kB]
238s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x javascript-common all 12 [5216 B]
238s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libio-string-perl all 1.08-4 [11.1 kB]
238s Get:43 http://ftpmaster.internal/ubuntu plucky/universe s390x liblatex-tounicode-perl all 0.55-1 [28.8 kB]
238s Get:44 http://ftpmaster.internal/ubuntu plucky/universe s390x libbibtex-parser-perl all 1.05+dfsg-1 [16.5 kB]
238s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.1-2 [252 kB]
238s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x libblas-dev s390x 3.12.1-2 [254 kB]
238s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x libboost1.83-dev s390x 1.83.0-4.1ubuntu2 [10.7 MB]
248s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x libboost-dev s390x 1.83.0.2ubuntu1 [4470 B]
248s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x libbz2-dev s390x 1.0.8-6 [39.1 kB]
248s Get:50 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB]
248s Get:51 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB]
248s Get:52 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B]
248s Get:53 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB]
248s Get:54 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB]
249s Get:55 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo-gobject2 s390x 1.18.2-2 [127 kB]
249s Get:56 http://ftpmaster.internal/ubuntu plucky/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB]
249s Get:57 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.23-1 [46.1 kB]
249s Get:58 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate-dev s390x 1.23-1 [52.2 kB]
249s Get:59 http://ftpmaster.internal/ubuntu plucky/main s390x libgdk-pixbuf2.0-common all 2.42.12+dfsg-2 [8004 B]
249s Get:60 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB]
249s Get:61 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B]
249s Get:62 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB]
249s Get:63 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB]
249s Get:64 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB]
249s Get:65 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB]
250s Get:66 http://ftpmaster.internal/ubuntu plucky/main s390x libgdk-pixbuf-2.0-0 s390x 2.42.12+dfsg-2 [154 kB]
250s Get:67 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB]
250s Get:68 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB]
250s Get:69 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB]
250s Get:70 http://ftpmaster.internal/ubuntu plucky/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB]
250s Get:71 http://ftpmaster.internal/ubuntu plucky/main s390x libicu-dev s390x 76.1-1ubuntu2 [12.2 MB]
261s Get:72 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8-dev s390x 2.1.5-3ubuntu2 [281 kB]
262s Get:73 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B]
262s Get:74 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B]
262s Get:75 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
262s Get:76 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-popper.js all 1.16.1+ds-6 [54.1 kB]
262s Get:77 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB]
262s Get:78 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-d3 all 3.5.17-4 [132 kB]
262s Get:79 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-es5-shim all 4.6.7-2 [39.8 kB]
262s Get:80 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB]
263s Get:81 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
263s Get:82 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB]
263s Get:83 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-datatables-extensions all 0.0+git20150910.28fd64e+dfsg-5 [648 kB]
264s Get:84 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
264s Get:85 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B]
264s Get:86 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
264s Get:87 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB]
264s Get:88 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-json all 0~20221030+~1.0.8-1 [20.6 kB]
264s Get:89 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-lunr all 2.3.9~dfsg-2 [66.8 kB]
264s Get:90 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB]
264s Get:91 http://ftpmaster.internal/ubuntu plucky/main s390x libkpathsea6 s390x 2024.20240313.70630+ds-5build2 [66.9 kB]
264s Get:92 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.1-2 [2971 kB]
267s Get:93 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack-dev s390x 3.12.1-2 [5967 kB]
272s Get:94 http://ftpmaster.internal/ubuntu plucky/main s390x liblua5.4-0 s390x 5.4.7-1 [174 kB]
272s Get:95 http://ftpmaster.internal/ubuntu plucky/universe s390x libmpfi0 s390x 1.5.4+ds-4 [34.1 kB]
272s Get:96 http://ftpmaster.internal/ubuntu plucky/main s390x libncurses-dev s390x 6.5+20250216-2 [407 kB]
272s Get:97 http://ftpmaster.internal/ubuntu plucky/main s390x libthai-data all 0.1.29-2build1 [158 kB]
272s Get:98 http://ftpmaster.internal/ubuntu plucky/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB]
272s Get:99 http://ftpmaster.internal/ubuntu plucky/main s390x libpango-1.0-0 s390x 1.56.2-1 [253 kB]
273s Get:100 http://ftpmaster.internal/ubuntu plucky/main s390x libpangoft2-1.0-0 s390x 1.56.2-1 [50.2 kB]
273s Get:101 http://ftpmaster.internal/ubuntu plucky/main s390x libpangocairo-1.0-0 s390x 1.56.2-1 [28.2 kB]
273s Get:102 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB]
273s Get:103 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB]
273s Get:104 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-16-0 s390x 10.45-1 [259 kB]
273s Get:105 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-32-0 s390x 10.45-1 [245 kB]
273s Get:106 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-posix3 s390x 10.45-1 [7080 B]
274s Get:107 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-dev s390x 10.45-1 [899 kB]
274s Get:108 http://ftpmaster.internal/ubuntu plucky/main s390x libpkgconf3 s390x 1.8.1-4 [31.2 kB]
274s Get:109 http://ftpmaster.internal/ubuntu plucky/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB]
275s Get:110 http://ftpmaster.internal/ubuntu plucky/main s390x libpng-dev s390x 1.6.47-1 [278 kB]
275s Get:111 http://ftpmaster.internal/ubuntu plucky/universe s390x libpotrace0 s390x 1.16-2build1 [18.7 kB]
275s Get:112 http://ftpmaster.internal/ubuntu plucky/main s390x libptexenc1 s390x 2024.20240313.70630+ds-5build2 [43.4 kB]
275s Get:113 http://ftpmaster.internal/ubuntu plucky/main s390x libreadline-dev s390x 8.2-6 [187 kB]
275s Get:114 http://ftpmaster.internal/ubuntu plucky/main s390x librsvg2-2 s390x 2.59.90+dfsg-2 [1986 kB]
277s Get:115 http://ftpmaster.internal/ubuntu plucky/main s390x libsm6 s390x 2:1.2.4-1 [18.4 kB]
277s Get:116 http://ftpmaster.internal/ubuntu plucky/main s390x libsynctex2 s390x 2024.20240313.70630+ds-5build2 [64.6 kB]
277s Get:117 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB]
277s Get:118 http://ftpmaster.internal/ubuntu plucky/universe s390x libteckit0 s390x 2.5.12+ds1-1 [433 kB]
277s Get:119 http://ftpmaster.internal/ubuntu plucky/main s390x libtexlua53-5 s390x 2024.20240313.70630+ds-5build2 [131 kB]
278s Get:120 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB]
278s Get:121 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B]
278s Get:122 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.16-1 [830 kB]
278s Get:123 http://ftpmaster.internal/ubuntu plucky/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB]
278s Get:124 http://ftpmaster.internal/ubuntu plucky/main s390x libxmu6 s390x 2:1.1.3-3build2 [53.0 kB]
278s Get:125 http://ftpmaster.internal/ubuntu plucky/main s390x libxpm4 s390x 1:3.5.17-1build2 [41.2 kB]
278s Get:126 http://ftpmaster.internal/ubuntu plucky/main s390x libxaw7 s390x 2:1.0.16-1 [201 kB]
278s Get:127 http://ftpmaster.internal/ubuntu plucky/main s390x libxi6 s390x 2:1.8.2-1 [35.4 kB]
278s Get:128 http://ftpmaster.internal/ubuntu plucky/universe s390x libzzip-0-13t64 s390x 0.13.78+dfsg.1-0.1 [29.8 kB]
278s Get:129 http://ftpmaster.internal/ubuntu plucky/main s390x zip s390x 3.0-14ubuntu2 [187 kB]
278s Get:130 http://ftpmaster.internal/ubuntu plucky/main s390x unzip s390x 6.0-28ubuntu6 [186 kB]
279s Get:131 http://ftpmaster.internal/ubuntu plucky/main s390x xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
279s Get:132 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-core s390x 4.4.3-1 [28.6 MB]
306s Get:133 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-littler s390x 0.3.20-2 [95.0 kB]
306s Get:134 http://ftpmaster.internal/ubuntu plucky/universe s390x littler all 0.3.20-2 [2554 B]
306s Get:135 http://ftpmaster.internal/ubuntu plucky/universe s390x node-bootstrap-sass all 3.4.3-2 [187 kB]
307s Get:136 http://ftpmaster.internal/ubuntu plucky/universe s390x node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
307s Get:137 http://ftpmaster.internal/ubuntu plucky/universe s390x node-normalize.css all 8.0.1-5 [10.8 kB]
307s Get:138 http://ftpmaster.internal/ubuntu plucky/universe s390x pandoc-data all 3.1.11.1-3build1 [78.8 kB]
307s Get:139 http://ftpmaster.internal/ubuntu plucky/universe s390x pandoc s390x 3.1.11.1+ds-2 [52.5 MB]
356s Get:140 http://ftpmaster.internal/ubuntu plucky/main s390x liblzma-dev s390x 5.6.4-1 [183 kB]
356s Get:141 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf-bin s390x 1.8.1-4 [21.5 kB]
356s Get:142 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf s390x 1.8.1-4 [16.7 kB]
356s Get:143 http://ftpmaster.internal/ubuntu plucky/main s390x libtirpc-dev s390x 1.3.4+ds-1.3 [196 kB]
356s Get:144 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-dev all 4.4.3-1 [4176 B]
356s Get:145 http://ftpmaster.internal/ubuntu plucky/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
356s Get:146 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocgenerics all 0.52.0-2 [624 kB]
357s Get:147 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-base64enc s390x 0.1-3-3 [28.0 kB]
357s Get:148 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-digest s390x 0.6.37-1 [205 kB]
357s Get:149 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fastmap s390x 1.2.0-1 [72.4 kB]
357s Get:150 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rlang s390x 1.1.5-1 [1713 kB]
359s Get:151 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-htmltools s390x 0.5.8.1-1 [372 kB]
359s Get:152 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-evaluate all 1.0.3-1 [114 kB]
359s Get:153 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-xfun s390x 0.51+dfsg-1 [574 kB]
360s Get:154 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-highr all 0.11+dfsg-1 [38.5 kB]
360s Get:155 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-yaml s390x 2.3.10-1 [113 kB]
360s Get:156 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB]
365s Get:157 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-knitr all 1.49+dfsg-1 [859 kB]
366s Get:158 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cachem s390x 1.1.0-1 [74.0 kB]
366s Get:159 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB]
366s Get:160 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-jsonlite s390x 1.9.1+dfsg-1 [447 kB]
366s Get:161 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cli s390x 3.6.4-1 [1379 kB]
368s Get:162 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-glue s390x 1.8.0-1 [164 kB]
368s Get:163 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
368s Get:164 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-memoise all 2.0.1-1 [53.9 kB]
368s Get:165 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mime s390x 0.12-2 [35.8 kB]
368s Get:166 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fs s390x 1.6.5+dfsg-1 [245 kB]
368s Get:167 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r6 all 2.6.1-1 [101 kB]
368s Get:168 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rappdirs s390x 0.3.3-1 [47.5 kB]
368s Get:169 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sass s390x 0.4.9+dfsg-1 [1019 kB]
369s Get:170 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bslib all 0.8.0+dfsg-1 [4294 kB]
373s Get:171 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fontawesome all 0.5.3-1 [1331 kB]
375s Get:172 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tinytex all 0.56-1 [148 kB]
375s Get:173 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-modernizr all 3.13.0-0.1 [101 kB]
375s Get:174 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
375s Get:175 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcpp s390x 1.0.14-1 [2003 kB]
377s Get:176 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-later s390x 1.4.1+dfsg-1 [148 kB]
378s Get:177 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB]
378s Get:178 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-promises s390x 1.3.2+dfsg-1 [296 kB]
378s Get:179 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-httpuv s390x 1.6.15+dfsg-1 [507 kB]
379s Get:180 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-xtable all 1:1.8-4-2 [689 kB]
379s Get:181 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sourcetools s390x 0.1.7-1-1 [47.1 kB]
379s Get:182 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-crayon all 1.5.3-1 [165 kB]
379s Get:183 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-withr all 3.0.2+dfsg-1 [214 kB]
380s Get:184 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-commonmark s390x 1.9.2-2 [142 kB]
380s Get:185 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
380s Get:186 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-shiny all 1.10.0+dfsg-2 [3124 kB]
383s Get:187 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB]
384s Get:188 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bookdown all 0.42+dfsg-1 [1409 kB]
386s Get:189 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB]
386s Get:190 http://ftpmaster.internal/ubuntu plucky/universe s390x tex-common all 6.19 [29.8 kB]
386s Get:191 http://ftpmaster.internal/ubuntu plucky/main s390x t1utils s390x 1.41-4build3 [65.6 kB]
386s Get:192 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-binaries s390x 2024.20240313.70630+ds-5build2 [9171 kB]
394s Get:193 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-base all 2024.20250114-1 [22.5 MB]
412s Get:194 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-latex-base all 2024.20250114-1 [1264 kB]
413s Get:195 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-bibtex-extra all 2024.20250114-1 [79.5 MB]
498s Get:196 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocversion all 3.20.0-2 [11.1 kB]
498s Get:197 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocstyle all 2.34.0+dfsg-1 [451 kB]
498s Get:198 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rjson s390x 0.2.23-1 [104 kB]
498s Get:199 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bitops s390x 1.0-9-1 [30.1 kB]
498s Get:200 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcurl s390x 1.98-1.16+dfsg-1 [808 kB]
499s Get:201 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-dbi all 1.2.3-1 [853 kB]
500s Get:202 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-gtable all 0.3.6+dfsg-1 [199 kB]
500s Get:203 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-isoband s390x 0.2.7-1 [1481 kB]
502s Get:204 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mass s390x 7.3-64-1 [1113 kB]
503s Get:205 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lattice s390x 0.22-6-1 [1340 kB]
504s Get:206 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-nlme s390x 3.1.167-1 [2323 kB]
507s Get:207 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-matrix s390x 1.7-3-1 [4449 kB]
511s Get:208 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mgcv s390x 1.9-1-1 [3348 kB]
513s Get:209 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-farver s390x 2.1.2-1 [1353 kB]
514s Get:210 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-labeling all 0.4.3-1 [62.1 kB]
514s Get:211 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-colorspace s390x 2.1-1+dfsg-1 [1567 kB]
516s Get:212 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-munsell all 0.5.1-1 [213 kB]
516s Get:213 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB]
516s Get:214 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-viridislite all 0.4.2-2 [1088 kB]
517s Get:215 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-scales all 1.3.0-1 [603 kB]
517s Get:216 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fansi s390x 1.0.5-1 [615 kB]
518s Get:217 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB]
518s Get:218 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB]
519s Get:219 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pillar all 1.10.1+dfsg-1 [453 kB]
520s Get:220 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB]
520s Get:221 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tibble s390x 3.2.1+dfsg-3 [420 kB]
520s Get:222 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB]
523s Get:223 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-gridextra all 2.3-3build1 [1024 kB]
524s Get:224 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-png s390x 0.1-8-1build2 [41.5 kB]
524s Get:225 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB]
524s Get:226 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lazyeval s390x 0.2.2-1build1 [143 kB]
524s Get:227 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB]
524s Get:228 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-dt all 0.33+dfsg-1 [250 kB]
524s Get:229 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rsvg s390x 2.6.1-1 [272 kB]
525s Get:230 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-stringi s390x 1.8.4-1build1 [917 kB]
526s Get:231 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bh all 1.84.0-1 [5962 B]
526s Get:232 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-chemminer s390x 3.58.0+dfsg-2 [1204 kB]
527s Get:233 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-runit all 0.4.33-1 [377 kB]
527s Get:234 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-fmcsr s390x 1.48.0+dfsg-2 [246 kB]
527s Get:235 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-codetools all 0.2-20-1 [90.5 kB]
528s Preconfiguring packages ...
528s Fetched 377 MB in 5min 54s (1064 kB/s)
528s Selecting previously unselected package libisl23:s390x.
528s (Reading database ... 
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528s Preparing to unpack .../000-libisl23_0.27-1_s390x.deb ...
528s Unpacking libisl23:s390x (0.27-1) ...
528s Selecting previously unselected package libmpc3:s390x.
528s Preparing to unpack .../001-libmpc3_1.3.1-1build2_s390x.deb ...
528s Unpacking libmpc3:s390x (1.3.1-1build2) ...
528s Selecting previously unselected package cpp-14-s390x-linux-gnu.
528s Preparing to unpack .../002-cpp-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
528s Unpacking cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
528s Selecting previously unselected package cpp-14.
528s Preparing to unpack .../003-cpp-14_14.2.0-17ubuntu3_s390x.deb ...
528s Unpacking cpp-14 (14.2.0-17ubuntu3) ...
528s Selecting previously unselected package cpp-s390x-linux-gnu.
528s Preparing to unpack .../004-cpp-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
528s Unpacking cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
528s Selecting previously unselected package cpp.
528s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_s390x.deb ...
528s Unpacking cpp (4:14.2.0-1ubuntu1) ...
528s Selecting previously unselected package libcc1-0:s390x.
528s Preparing to unpack .../006-libcc1-0_15-20250222-0ubuntu1_s390x.deb ...
528s Unpacking libcc1-0:s390x (15-20250222-0ubuntu1) ...
528s Selecting previously unselected package libgomp1:s390x.
528s Preparing to unpack .../007-libgomp1_15-20250222-0ubuntu1_s390x.deb ...
528s Unpacking libgomp1:s390x (15-20250222-0ubuntu1) ...
528s Selecting previously unselected package libitm1:s390x.
528s Preparing to unpack .../008-libitm1_15-20250222-0ubuntu1_s390x.deb ...
528s Unpacking libitm1:s390x (15-20250222-0ubuntu1) ...
528s Selecting previously unselected package libasan8:s390x.
528s Preparing to unpack .../009-libasan8_15-20250222-0ubuntu1_s390x.deb ...
528s Unpacking libasan8:s390x (15-20250222-0ubuntu1) ...
528s Selecting previously unselected package libubsan1:s390x.
528s Preparing to unpack .../010-libubsan1_15-20250222-0ubuntu1_s390x.deb ...
528s Unpacking libubsan1:s390x (15-20250222-0ubuntu1) ...
528s Selecting previously unselected package libgcc-14-dev:s390x.
528s Preparing to unpack .../011-libgcc-14-dev_14.2.0-17ubuntu3_s390x.deb ...
528s Unpacking libgcc-14-dev:s390x (14.2.0-17ubuntu3) ...
529s Selecting previously unselected package gcc-14-s390x-linux-gnu.
529s Preparing to unpack .../012-gcc-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
529s Unpacking gcc-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
529s Selecting previously unselected package gcc-14.
529s Preparing to unpack .../013-gcc-14_14.2.0-17ubuntu3_s390x.deb ...
529s Unpacking gcc-14 (14.2.0-17ubuntu3) ...
529s Selecting previously unselected package gcc-s390x-linux-gnu.
529s Preparing to unpack .../014-gcc-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
529s Unpacking gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
529s Selecting previously unselected package gcc.
529s Preparing to unpack .../015-gcc_4%3a14.2.0-1ubuntu1_s390x.deb ...
529s Unpacking gcc (4:14.2.0-1ubuntu1) ...
529s Selecting previously unselected package libstdc++-14-dev:s390x.
529s Preparing to unpack .../016-libstdc++-14-dev_14.2.0-17ubuntu3_s390x.deb ...
529s Unpacking libstdc++-14-dev:s390x (14.2.0-17ubuntu3) ...
529s Selecting previously unselected package g++-14-s390x-linux-gnu.
529s Preparing to unpack .../017-g++-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
529s Unpacking g++-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
529s Selecting previously unselected package g++-14.
529s Preparing to unpack .../018-g++-14_14.2.0-17ubuntu3_s390x.deb ...
529s Unpacking g++-14 (14.2.0-17ubuntu3) ...
529s Selecting previously unselected package g++-s390x-linux-gnu.
529s Preparing to unpack .../019-g++-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
529s Unpacking g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
529s Selecting previously unselected package g++.
529s Preparing to unpack .../020-g++_4%3a14.2.0-1ubuntu1_s390x.deb ...
529s Unpacking g++ (4:14.2.0-1ubuntu1) ...
529s Selecting previously unselected package build-essential.
529s Preparing to unpack .../021-build-essential_12.10ubuntu1_s390x.deb ...
529s Unpacking build-essential (12.10ubuntu1) ...
529s Selecting previously unselected package dctrl-tools.
529s Preparing to unpack .../022-dctrl-tools_2.24-3build3_s390x.deb ...
529s Unpacking dctrl-tools (2.24-3build3) ...
529s Selecting previously unselected package libfreetype6:s390x.
529s Preparing to unpack .../023-libfreetype6_2.13.3+dfsg-1_s390x.deb ...
529s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ...
529s Selecting previously unselected package fonts-dejavu-mono.
529s Preparing to unpack .../024-fonts-dejavu-mono_2.37-8_all.deb ...
529s Unpacking fonts-dejavu-mono (2.37-8) ...
529s Selecting previously unselected package fonts-dejavu-core.
529s Preparing to unpack .../025-fonts-dejavu-core_2.37-8_all.deb ...
529s Unpacking fonts-dejavu-core (2.37-8) ...
529s Selecting previously unselected package fontconfig-config.
529s Preparing to unpack .../026-fontconfig-config_2.15.0-2ubuntu1_s390x.deb ...
529s Unpacking fontconfig-config (2.15.0-2ubuntu1) ...
529s Selecting previously unselected package libfontconfig1:s390x.
529s Preparing to unpack .../027-libfontconfig1_2.15.0-2ubuntu1_s390x.deb ...
529s Unpacking libfontconfig1:s390x (2.15.0-2ubuntu1) ...
529s Selecting previously unselected package fontconfig.
529s Preparing to unpack .../028-fontconfig_2.15.0-2ubuntu1_s390x.deb ...
529s Unpacking fontconfig (2.15.0-2ubuntu1) ...
529s Selecting previously unselected package fonts-font-awesome.
529s Preparing to unpack .../029-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ...
529s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ...
529s Selecting previously unselected package fonts-glyphicons-halflings.
529s Preparing to unpack .../030-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ...
529s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
529s Selecting previously unselected package fonts-lmodern.
529s Preparing to unpack .../031-fonts-lmodern_2.005-1_all.deb ...
529s Unpacking fonts-lmodern (2.005-1) ...
529s Selecting previously unselected package fonts-mathjax.
529s Preparing to unpack .../032-fonts-mathjax_2.7.9+dfsg-1_all.deb ...
529s Unpacking fonts-mathjax (2.7.9+dfsg-1) ...
530s Selecting previously unselected package libgfortran5:s390x.
530s Preparing to unpack .../033-libgfortran5_15-20250222-0ubuntu1_s390x.deb ...
530s Unpacking libgfortran5:s390x (15-20250222-0ubuntu1) ...
530s Selecting previously unselected package libgfortran-14-dev:s390x.
530s Preparing to unpack .../034-libgfortran-14-dev_14.2.0-17ubuntu3_s390x.deb ...
530s Unpacking libgfortran-14-dev:s390x (14.2.0-17ubuntu3) ...
530s Selecting previously unselected package gfortran-14-s390x-linux-gnu.
530s Preparing to unpack .../035-gfortran-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
530s Unpacking gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
530s Selecting previously unselected package gfortran-14.
530s Preparing to unpack .../036-gfortran-14_14.2.0-17ubuntu3_s390x.deb ...
530s Unpacking gfortran-14 (14.2.0-17ubuntu3) ...
530s Selecting previously unselected package gfortran-s390x-linux-gnu.
530s Preparing to unpack .../037-gfortran-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
530s Unpacking gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
530s Selecting previously unselected package gfortran.
530s Preparing to unpack .../038-gfortran_4%3a14.2.0-1ubuntu1_s390x.deb ...
530s Unpacking gfortran (4:14.2.0-1ubuntu1) ...
530s Selecting previously unselected package icu-devtools.
530s Preparing to unpack .../039-icu-devtools_76.1-1ubuntu2_s390x.deb ...
530s Unpacking icu-devtools (76.1-1ubuntu2) ...
530s Selecting previously unselected package javascript-common.
530s Preparing to unpack .../040-javascript-common_12_all.deb ...
530s Unpacking javascript-common (12) ...
530s Selecting previously unselected package libio-string-perl.
530s Preparing to unpack .../041-libio-string-perl_1.08-4_all.deb ...
530s Unpacking libio-string-perl (1.08-4) ...
530s Selecting previously unselected package liblatex-tounicode-perl.
530s Preparing to unpack .../042-liblatex-tounicode-perl_0.55-1_all.deb ...
530s Unpacking liblatex-tounicode-perl (0.55-1) ...
530s Selecting previously unselected package libbibtex-parser-perl.
530s Preparing to unpack .../043-libbibtex-parser-perl_1.05+dfsg-1_all.deb ...
530s Unpacking libbibtex-parser-perl (1.05+dfsg-1) ...
530s Selecting previously unselected package libblas3:s390x.
530s Preparing to unpack .../044-libblas3_3.12.1-2_s390x.deb ...
530s Unpacking libblas3:s390x (3.12.1-2) ...
530s Selecting previously unselected package libblas-dev:s390x.
530s Preparing to unpack .../045-libblas-dev_3.12.1-2_s390x.deb ...
530s Unpacking libblas-dev:s390x (3.12.1-2) ...
530s Selecting previously unselected package libboost1.83-dev:s390x.
530s Preparing to unpack .../046-libboost1.83-dev_1.83.0-4.1ubuntu2_s390x.deb ...
530s Unpacking libboost1.83-dev:s390x (1.83.0-4.1ubuntu2) ...
531s Selecting previously unselected package libboost-dev:s390x.
531s Preparing to unpack .../047-libboost-dev_1.83.0.2ubuntu1_s390x.deb ...
531s Unpacking libboost-dev:s390x (1.83.0.2ubuntu1) ...
531s Selecting previously unselected package libbz2-dev:s390x.
531s Preparing to unpack .../048-libbz2-dev_1.0.8-6_s390x.deb ...
531s Unpacking libbz2-dev:s390x (1.0.8-6) ...
531s Selecting previously unselected package libpixman-1-0:s390x.
531s Preparing to unpack .../049-libpixman-1-0_0.44.0-3_s390x.deb ...
531s Unpacking libpixman-1-0:s390x (0.44.0-3) ...
531s Selecting previously unselected package libxcb-render0:s390x.
531s Preparing to unpack .../050-libxcb-render0_1.17.0-2_s390x.deb ...
531s Unpacking libxcb-render0:s390x (1.17.0-2) ...
531s Selecting previously unselected package libxcb-shm0:s390x.
531s Preparing to unpack .../051-libxcb-shm0_1.17.0-2_s390x.deb ...
531s Unpacking libxcb-shm0:s390x (1.17.0-2) ...
531s Selecting previously unselected package libxrender1:s390x.
531s Preparing to unpack .../052-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ...
531s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ...
531s Selecting previously unselected package libcairo2:s390x.
531s Preparing to unpack .../053-libcairo2_1.18.2-2_s390x.deb ...
531s Unpacking libcairo2:s390x (1.18.2-2) ...
531s Selecting previously unselected package libcairo-gobject2:s390x.
531s Preparing to unpack .../054-libcairo-gobject2_1.18.2-2_s390x.deb ...
531s Unpacking libcairo-gobject2:s390x (1.18.2-2) ...
531s Selecting previously unselected package libdatrie1:s390x.
531s Preparing to unpack .../055-libdatrie1_0.2.13-3build1_s390x.deb ...
531s Unpacking libdatrie1:s390x (0.2.13-3build1) ...
531s Selecting previously unselected package libdeflate0:s390x.
531s Preparing to unpack .../056-libdeflate0_1.23-1_s390x.deb ...
531s Unpacking libdeflate0:s390x (1.23-1) ...
531s Selecting previously unselected package libdeflate-dev:s390x.
531s Preparing to unpack .../057-libdeflate-dev_1.23-1_s390x.deb ...
531s Unpacking libdeflate-dev:s390x (1.23-1) ...
531s Selecting previously unselected package libgdk-pixbuf2.0-common.
531s Preparing to unpack .../058-libgdk-pixbuf2.0-common_2.42.12+dfsg-2_all.deb ...
531s Unpacking libgdk-pixbuf2.0-common (2.42.12+dfsg-2) ...
531s Selecting previously unselected package libjpeg-turbo8:s390x.
531s Preparing to unpack .../059-libjpeg-turbo8_2.1.5-3ubuntu2_s390x.deb ...
531s Unpacking libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ...
531s Selecting previously unselected package libjpeg8:s390x.
531s Preparing to unpack .../060-libjpeg8_8c-2ubuntu11_s390x.deb ...
531s Unpacking libjpeg8:s390x (8c-2ubuntu11) ...
531s Selecting previously unselected package libjbig0:s390x.
531s Preparing to unpack .../061-libjbig0_2.1-6.1ubuntu2_s390x.deb ...
531s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ...
531s Selecting previously unselected package libsharpyuv0:s390x.
531s Preparing to unpack .../062-libsharpyuv0_1.5.0-0.1_s390x.deb ...
531s Unpacking libsharpyuv0:s390x (1.5.0-0.1) ...
531s Selecting previously unselected package libwebp7:s390x.
531s Preparing to unpack .../063-libwebp7_1.5.0-0.1_s390x.deb ...
531s Unpacking libwebp7:s390x (1.5.0-0.1) ...
531s Selecting previously unselected package libtiff6:s390x.
531s Preparing to unpack .../064-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ...
531s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ...
531s Selecting previously unselected package libgdk-pixbuf-2.0-0:s390x.
531s Preparing to unpack .../065-libgdk-pixbuf-2.0-0_2.42.12+dfsg-2_s390x.deb ...
531s Unpacking libgdk-pixbuf-2.0-0:s390x (2.42.12+dfsg-2) ...
531s Selecting previously unselected package libgraphite2-3:s390x.
531s Preparing to unpack .../066-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ...
531s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
531s Selecting previously unselected package libharfbuzz0b:s390x.
531s Preparing to unpack .../067-libharfbuzz0b_10.2.0-1_s390x.deb ...
531s Unpacking libharfbuzz0b:s390x (10.2.0-1) ...
531s Selecting previously unselected package x11-common.
531s Preparing to unpack .../068-x11-common_1%3a7.7+23ubuntu3_all.deb ...
531s Unpacking x11-common (1:7.7+23ubuntu3) ...
531s Selecting previously unselected package libice6:s390x.
531s Preparing to unpack .../069-libice6_2%3a1.1.1-1_s390x.deb ...
531s Unpacking libice6:s390x (2:1.1.1-1) ...
531s Selecting previously unselected package libicu-dev:s390x.
531s Preparing to unpack .../070-libicu-dev_76.1-1ubuntu2_s390x.deb ...
531s Unpacking libicu-dev:s390x (76.1-1ubuntu2) ...
532s Selecting previously unselected package libjpeg-turbo8-dev:s390x.
532s Preparing to unpack .../071-libjpeg-turbo8-dev_2.1.5-3ubuntu2_s390x.deb ...
532s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ...
532s Selecting previously unselected package libjpeg8-dev:s390x.
532s Preparing to unpack .../072-libjpeg8-dev_8c-2ubuntu11_s390x.deb ...
532s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ...
532s Selecting previously unselected package libjpeg-dev:s390x.
532s Preparing to unpack .../073-libjpeg-dev_8c-2ubuntu11_s390x.deb ...
532s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ...
532s Selecting previously unselected package libjs-bootstrap.
532s Preparing to unpack .../074-libjs-bootstrap_3.4.1+dfsg-3_all.deb ...
532s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ...
532s Selecting previously unselected package libjs-popper.js.
532s Preparing to unpack .../075-libjs-popper.js_1.16.1+ds-6_all.deb ...
532s Unpacking libjs-popper.js (1.16.1+ds-6) ...
532s Selecting previously unselected package libjs-bootstrap4.
532s Preparing to unpack .../076-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ...
532s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ...
532s Selecting previously unselected package libjs-d3.
532s Preparing to unpack .../077-libjs-d3_3.5.17-4_all.deb ...
532s Unpacking libjs-d3 (3.5.17-4) ...
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535s Selecting previously unselected package r-cran-sass.
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535s Selecting previously unselected package r-cran-bslib.
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536s Selecting previously unselected package r-cran-fontawesome.
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536s Selecting previously unselected package r-cran-tinytex.
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536s Selecting previously unselected package libjs-modernizr.
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536s Selecting previously unselected package r-cran-pkgkitten.
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536s Selecting previously unselected package r-cran-rcpp.
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536s Selecting previously unselected package r-cran-later.
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536s Unpacking r-cran-later (1.4.1+dfsg-1) ...
536s Selecting previously unselected package r-cran-magrittr.
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536s Selecting previously unselected package r-cran-promises.
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536s Selecting previously unselected package r-cran-httpuv.
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536s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ...
536s Selecting previously unselected package r-cran-xtable.
536s Preparing to unpack .../179-r-cran-xtable_1%3a1.8-4-2_all.deb ...
536s Unpacking r-cran-xtable (1:1.8-4-2) ...
536s Selecting previously unselected package r-cran-sourcetools.
536s Preparing to unpack .../180-r-cran-sourcetools_0.1.7-1-1_s390x.deb ...
536s Unpacking r-cran-sourcetools (0.1.7-1-1) ...
536s Selecting previously unselected package r-cran-crayon.
536s Preparing to unpack .../181-r-cran-crayon_1.5.3-1_all.deb ...
536s Unpacking r-cran-crayon (1.5.3-1) ...
536s Selecting previously unselected package r-cran-withr.
536s Preparing to unpack .../182-r-cran-withr_3.0.2+dfsg-1_all.deb ...
536s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
536s Selecting previously unselected package r-cran-commonmark.
536s Preparing to unpack .../183-r-cran-commonmark_1.9.2-2_s390x.deb ...
536s Unpacking r-cran-commonmark (1.9.2-2) ...
536s Selecting previously unselected package libjs-twitter-bootstrap-datepicker.
536s Preparing to unpack .../184-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ...
536s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ...
536s Selecting previously unselected package r-cran-shiny.
536s Preparing to unpack .../185-r-cran-shiny_1.10.0+dfsg-2_all.deb ...
536s Unpacking r-cran-shiny (1.10.0+dfsg-2) ...
536s Selecting previously unselected package r-cran-rmarkdown.
536s Preparing to unpack .../186-r-cran-rmarkdown_2.29+dfsg-1_all.deb ...
536s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ...
536s Selecting previously unselected package r-cran-bookdown.
536s Preparing to unpack .../187-r-cran-bookdown_0.42+dfsg-1_all.deb ...
536s Unpacking r-cran-bookdown (0.42+dfsg-1) ...
536s Selecting previously unselected package r-cran-biocmanager.
536s Preparing to unpack .../188-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ...
536s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ...
536s Selecting previously unselected package tex-common.
536s Preparing to unpack .../189-tex-common_6.19_all.deb ...
536s Unpacking tex-common (6.19) ...
536s Selecting previously unselected package t1utils.
536s Preparing to unpack .../190-t1utils_1.41-4build3_s390x.deb ...
536s Unpacking t1utils (1.41-4build3) ...
536s Selecting previously unselected package texlive-binaries.
536s Preparing to unpack .../191-texlive-binaries_2024.20240313.70630+ds-5build2_s390x.deb ...
536s Unpacking texlive-binaries (2024.20240313.70630+ds-5build2) ...
536s Selecting previously unselected package texlive-base.
536s Preparing to unpack .../192-texlive-base_2024.20250114-1_all.deb ...
536s Unpacking texlive-base (2024.20250114-1) ...
537s Selecting previously unselected package texlive-latex-base.
537s Preparing to unpack .../193-texlive-latex-base_2024.20250114-1_all.deb ...
537s Unpacking texlive-latex-base (2024.20250114-1) ...
538s Selecting previously unselected package texlive-bibtex-extra.
538s Preparing to unpack .../194-texlive-bibtex-extra_2024.20250114-1_all.deb ...
538s Unpacking texlive-bibtex-extra (2024.20250114-1) ...
540s Selecting previously unselected package r-bioc-biocversion.
540s Preparing to unpack .../195-r-bioc-biocversion_3.20.0-2_all.deb ...
540s Unpacking r-bioc-biocversion (3.20.0-2) ...
540s Selecting previously unselected package r-bioc-biocstyle.
540s Preparing to unpack .../196-r-bioc-biocstyle_2.34.0+dfsg-1_all.deb ...
540s Unpacking r-bioc-biocstyle (2.34.0+dfsg-1) ...
540s Selecting previously unselected package r-cran-rjson.
540s Preparing to unpack .../197-r-cran-rjson_0.2.23-1_s390x.deb ...
540s Unpacking r-cran-rjson (0.2.23-1) ...
540s Selecting previously unselected package r-cran-bitops.
540s Preparing to unpack .../198-r-cran-bitops_1.0-9-1_s390x.deb ...
540s Unpacking r-cran-bitops (1.0-9-1) ...
540s Selecting previously unselected package r-cran-rcurl.
540s Preparing to unpack .../199-r-cran-rcurl_1.98-1.16+dfsg-1_s390x.deb ...
540s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ...
540s Selecting previously unselected package r-cran-dbi.
540s Preparing to unpack .../200-r-cran-dbi_1.2.3-1_all.deb ...
540s Unpacking r-cran-dbi (1.2.3-1) ...
540s Selecting previously unselected package r-cran-gtable.
540s Preparing to unpack .../201-r-cran-gtable_0.3.6+dfsg-1_all.deb ...
540s Unpacking r-cran-gtable (0.3.6+dfsg-1) ...
540s Selecting previously unselected package r-cran-isoband.
540s Preparing to unpack .../202-r-cran-isoband_0.2.7-1_s390x.deb ...
540s Unpacking r-cran-isoband (0.2.7-1) ...
541s Selecting previously unselected package r-cran-mass.
541s Preparing to unpack .../203-r-cran-mass_7.3-64-1_s390x.deb ...
541s Unpacking r-cran-mass (7.3-64-1) ...
541s Selecting previously unselected package r-cran-lattice.
541s Preparing to unpack .../204-r-cran-lattice_0.22-6-1_s390x.deb ...
541s Unpacking r-cran-lattice (0.22-6-1) ...
541s Selecting previously unselected package r-cran-nlme.
541s Preparing to unpack .../205-r-cran-nlme_3.1.167-1_s390x.deb ...
541s Unpacking r-cran-nlme (3.1.167-1) ...
541s Selecting previously unselected package r-cran-matrix.
541s Preparing to unpack .../206-r-cran-matrix_1.7-3-1_s390x.deb ...
541s Unpacking r-cran-matrix (1.7-3-1) ...
541s Selecting previously unselected package r-cran-mgcv.
541s Preparing to unpack .../207-r-cran-mgcv_1.9-1-1_s390x.deb ...
541s Unpacking r-cran-mgcv (1.9-1-1) ...
541s Selecting previously unselected package r-cran-farver.
541s Preparing to unpack .../208-r-cran-farver_2.1.2-1_s390x.deb ...
541s Unpacking r-cran-farver (2.1.2-1) ...
541s Selecting previously unselected package r-cran-labeling.
541s Preparing to unpack .../209-r-cran-labeling_0.4.3-1_all.deb ...
541s Unpacking r-cran-labeling (0.4.3-1) ...
541s Selecting previously unselected package r-cran-colorspace.
541s Preparing to unpack .../210-r-cran-colorspace_2.1-1+dfsg-1_s390x.deb ...
541s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ...
541s Selecting previously unselected package r-cran-munsell.
541s Preparing to unpack .../211-r-cran-munsell_0.5.1-1_all.deb ...
541s Unpacking r-cran-munsell (0.5.1-1) ...
541s Selecting previously unselected package r-cran-rcolorbrewer.
541s Preparing to unpack .../212-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ...
541s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ...
541s Selecting previously unselected package r-cran-viridislite.
541s Preparing to unpack .../213-r-cran-viridislite_0.4.2-2_all.deb ...
541s Unpacking r-cran-viridislite (0.4.2-2) ...
541s Selecting previously unselected package r-cran-scales.
541s Preparing to unpack .../214-r-cran-scales_1.3.0-1_all.deb ...
541s Unpacking r-cran-scales (1.3.0-1) ...
541s Selecting previously unselected package r-cran-fansi.
541s Preparing to unpack .../215-r-cran-fansi_1.0.5-1_s390x.deb ...
541s Unpacking r-cran-fansi (1.0.5-1) ...
541s Selecting previously unselected package r-cran-utf8.
541s Preparing to unpack .../216-r-cran-utf8_1.2.4-1_s390x.deb ...
541s Unpacking r-cran-utf8 (1.2.4-1) ...
541s Selecting previously unselected package r-cran-vctrs.
541s Preparing to unpack .../217-r-cran-vctrs_0.6.5-1_s390x.deb ...
541s Unpacking r-cran-vctrs (0.6.5-1) ...
541s Selecting previously unselected package r-cran-pillar.
541s Preparing to unpack .../218-r-cran-pillar_1.10.1+dfsg-1_all.deb ...
541s Unpacking r-cran-pillar (1.10.1+dfsg-1) ...
541s Selecting previously unselected package r-cran-pkgconfig.
541s Preparing to unpack .../219-r-cran-pkgconfig_2.0.3-2build1_all.deb ...
541s Unpacking r-cran-pkgconfig (2.0.3-2build1) ...
541s Selecting previously unselected package r-cran-tibble.
541s Preparing to unpack .../220-r-cran-tibble_3.2.1+dfsg-3_s390x.deb ...
541s Unpacking r-cran-tibble (3.2.1+dfsg-3) ...
541s Selecting previously unselected package r-cran-ggplot2.
541s Preparing to unpack .../221-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ...
541s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ...
541s Selecting previously unselected package r-cran-gridextra.
541s Preparing to unpack .../222-r-cran-gridextra_2.3-3build1_all.deb ...
541s Unpacking r-cran-gridextra (2.3-3build1) ...
541s Selecting previously unselected package r-cran-png.
541s Preparing to unpack .../223-r-cran-png_0.1-8-1build2_s390x.deb ...
541s Unpacking r-cran-png (0.1-8-1build2) ...
541s Selecting previously unselected package r-cran-htmlwidgets.
541s Preparing to unpack .../224-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ...
541s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ...
541s Selecting previously unselected package r-cran-lazyeval.
541s Preparing to unpack .../225-r-cran-lazyeval_0.2.2-1build1_s390x.deb ...
541s Unpacking r-cran-lazyeval (0.2.2-1build1) ...
541s Selecting previously unselected package r-cran-crosstalk.
541s Preparing to unpack .../226-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ...
541s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ...
541s Selecting previously unselected package r-cran-dt.
541s Preparing to unpack .../227-r-cran-dt_0.33+dfsg-1_all.deb ...
541s Unpacking r-cran-dt (0.33+dfsg-1) ...
541s Selecting previously unselected package r-cran-rsvg.
541s Preparing to unpack .../228-r-cran-rsvg_2.6.1-1_s390x.deb ...
541s Unpacking r-cran-rsvg (2.6.1-1) ...
541s Selecting previously unselected package r-cran-stringi.
541s Preparing to unpack .../229-r-cran-stringi_1.8.4-1build1_s390x.deb ...
541s Unpacking r-cran-stringi (1.8.4-1build1) ...
541s Selecting previously unselected package r-cran-bh.
541s Preparing to unpack .../230-r-cran-bh_1.84.0-1_all.deb ...
541s Unpacking r-cran-bh (1.84.0-1) ...
541s Selecting previously unselected package r-bioc-chemminer.
541s Preparing to unpack .../231-r-bioc-chemminer_3.58.0+dfsg-2_s390x.deb ...
541s Unpacking r-bioc-chemminer (3.58.0+dfsg-2) ...
541s Selecting previously unselected package r-cran-runit.
541s Preparing to unpack .../232-r-cran-runit_0.4.33-1_all.deb ...
541s Unpacking r-cran-runit (0.4.33-1) ...
541s Selecting previously unselected package r-bioc-fmcsr.
541s Preparing to unpack .../233-r-bioc-fmcsr_1.48.0+dfsg-2_s390x.deb ...
541s Unpacking r-bioc-fmcsr (1.48.0+dfsg-2) ...
541s Selecting previously unselected package r-cran-codetools.
541s Preparing to unpack .../234-r-cran-codetools_0.2-20-1_all.deb ...
541s Unpacking r-cran-codetools (0.2-20-1) ...
541s Setting up libjs-json (0~20221030+~1.0.8-1) ...
541s Setting up javascript-common (12) ...
541s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
541s Setting up libpixman-1-0:s390x (0.44.0-3) ...
541s Setting up libsharpyuv0:s390x (1.5.0-0.1) ...
541s Setting up libncurses-dev:s390x (6.5+20250216-2) ...
541s Setting up fonts-mathjax (2.7.9+dfsg-1) ...
541s Setting up libxpm4:s390x (1:3.5.17-1build2) ...
541s Setting up libjs-mathjax (2.7.9+dfsg-1) ...
541s Setting up libxi6:s390x (2:1.8.2-1) ...
541s Setting up libxrender1:s390x (1:0.9.10-1.1build1) ...
541s Setting up libdatrie1:s390x (0.2.13-3build1) ...
541s Setting up libjs-popper.js (1.16.1+ds-6) ...
541s Setting up libxcb-render0:s390x (1.17.0-2) ...
541s Setting up libjs-sifter.js (0.6.0+dfsg-3) ...
541s Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
541s Setting up libjs-lunr (2.3.9~dfsg-2) ...
541s Setting up unzip (6.0-28ubuntu6) ...
541s Setting up liblatex-tounicode-perl (0.55-1) ...
541s Setting up libgdk-pixbuf2.0-common (2.42.12+dfsg-2) ...
541s Setting up x11-common (1:7.7+23ubuntu3) ...
542s Setting up node-html5shiv (3.7.3+dfsg-5) ...
542s Setting up libdeflate0:s390x (1.23-1) ...
542s Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ...
542s Setting up libxcb-shm0:s390x (1.17.0-2) ...
542s Setting up libreadline-dev:s390x (8.2-6) ...
542s Setting up libgomp1:s390x (15-20250222-0ubuntu1) ...
542s Setting up libjs-modernizr (3.13.0-0.1) ...
542s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ...
542s Setting up libpcre2-16-0:s390x (10.45-1) ...
542s Setting up libjs-es5-shim (4.6.7-2) ...
542s Setting up tex-common (6.19) ...
542s update-language: texlive-base not installed and configured, doing nothing!
542s Setting up libio-string-perl (1.08-4) ...
542s Setting up zip (3.0-14ubuntu2) ...
542s Setting up libpcre2-32-0:s390x (10.45-1) ...
542s Setting up libblas3:s390x (3.12.1-2) ...
542s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
542s Setting up libtirpc-dev:s390x (1.3.4+ds-1.3) ...
542s Setting up libpkgconf3:s390x (1.8.1-4) ...
542s Setting up libzzip-0-13t64:s390x (0.13.78+dfsg.1-0.1) ...
542s Setting up libfreetype6:s390x (2.13.3+dfsg-1) ...
542s Setting up libteckit0:s390x (2.5.12+ds1-1) ...
542s Setting up t1utils (1.41-4build3) ...
542s Setting up libtexlua53-5:s390x (2024.20240313.70630+ds-5build2) ...
542s Setting up libjs-d3 (3.5.17-4) ...
542s Setting up fonts-dejavu-mono (2.37-8) ...
542s Setting up libmpc3:s390x (1.3.1-1build2) ...
542s Setting up libtcl8.6:s390x (8.6.16+dfsg-1) ...
542s Setting up libmpfi0:s390x (1.5.4+ds-4) ...
542s Setting up icu-devtools (76.1-1ubuntu2) ...
542s Setting up fonts-dejavu-core (2.37-8) ...
542s Setting up pkgconf-bin (1.8.1-4) ...
542s Setting up libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ...
542s Setting up libkpathsea6:s390x (2024.20240313.70630+ds-5build2) ...
542s Setting up libgfortran5:s390x (15-20250222-0ubuntu1) ...
542s Setting up libwebp7:s390x (1.5.0-0.1) ...
542s Setting up liblzma-dev:s390x (5.6.4-1) ...
542s Setting up libubsan1:s390x (15-20250222-0ubuntu1) ...
542s Setting up zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ...
542s Setting up libpcre2-posix3:s390x (10.45-1) ...
542s Setting up libjs-highlight.js (9.18.5+dfsg1-2) ...
542s Setting up libasan8:s390x (15-20250222-0ubuntu1) ...
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542s Setting up liblua5.4-0:s390x (5.4.7-1) ...
542s Setting up libharfbuzz0b:s390x (10.2.0-1) ...
542s Setting up libthai-data (0.1.29-2build1) ...
542s Setting up node-bootstrap-sass (3.4.3-2) ...
542s Setting up libjs-prettify (2015.12.04+dfsg-1.1) ...
542s Setting up libxss1:s390x (1:1.2.3-1build3) ...
542s Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ...
542s Setting up libpaper2:s390x (2.2.5-0.3) ...
542s Setting up pandoc-data (3.1.11.1-3build1) ...
542s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
542s Setting up libisl23:s390x (0.27-1) ...
542s Setting up libdeflate-dev:s390x (1.23-1) ...
542s Setting up node-normalize.css (8.0.1-5) ...
542s Setting up libicu-dev:s390x (76.1-1ubuntu2) ...
542s Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ...
542s Setting up xdg-utils (1.2.1-2ubuntu1) ...
542s update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
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542s Setting up libblas-dev:s390x (3.12.1-2) ...
542s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so to provide /usr/lib/s390x-linux-gnu/libblas.so (libblas.so-s390x-linux-gnu) in auto mode
542s Setting up dctrl-tools (2.24-3build3) ...
542s Setting up libjs-bootstrap (3.4.1+dfsg-3) ...
542s Setting up libitm1:s390x (15-20250222-0ubuntu1) ...
542s Setting up libsynctex2:s390x (2024.20240313.70630+ds-5build2) ...
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542s Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ...
542s Setting up libjs-jquery-datatables-extensions (0.0+git20150910.28fd64e+dfsg-5) ...
542s Setting up libpotrace0:s390x (1.16-2build1) ...
542s Setting up libjpeg8:s390x (8c-2ubuntu11) ...
542s Setting up libice6:s390x (2:1.1.1-1) ...
542s Setting up libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ...
542s Setting up liblapack3:s390x (3.12.1-2) ...
542s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
542s Setting up libpcre2-dev:s390x (10.45-1) ...
542s Setting up fontconfig-config (2.15.0-2ubuntu1) ...
542s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ...
542s Setting up libpng-dev:s390x (1.6.47-1) ...
542s Setting up libpaper-utils (2.2.5-0.3) ...
542s Setting up libbibtex-parser-perl (1.05+dfsg-1) ...
542s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ...
542s Setting up pkgconf:s390x (1.8.1-4) ...
542s Setting up libthai0:s390x (0.1.29-2build1) ...
542s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ...
542s Setting up libptexenc1:s390x (2024.20240313.70630+ds-5build2) ...
542s Setting up pandoc (3.1.11.1+ds-2) ...
542s Setting up liblapack-dev:s390x (3.12.1-2) ...
542s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode
542s Setting up cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
542s Setting up cpp-14 (14.2.0-17ubuntu3) ...
542s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu4) ...
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542s Setting up libfontconfig1:s390x (2.15.0-2ubuntu1) ...
542s Setting up libgcc-14-dev:s390x (14.2.0-17ubuntu3) ...
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544s Setting up libpango-1.0-0:s390x (1.56.2-1) ...
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544s Setting up libcairo2:s390x (1.18.2-2) ...
544s Setting up gcc-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
544s Setting up gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
544s Setting up libxt6t64:s390x (1:1.2.1-1.2build1) ...
544s Setting up g++-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
544s Setting up cpp (4:14.2.0-1ubuntu1) ...
544s Setting up libcairo-gobject2:s390x (1.18.2-2) ...
544s Setting up libboost-dev:s390x (1.83.0.2ubuntu1) ...
544s Setting up libpangoft2-1.0-0:s390x (1.56.2-1) ...
544s Setting up libpangocairo-1.0-0:s390x (1.56.2-1) ...
544s Setting up libxmu6:s390x (2:1.1.3-3build2) ...
544s Setting up gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
544s Setting up g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
544s Setting up libxaw7:s390x (2:1.0.16-1) ...
544s Setting up gcc-14 (14.2.0-17ubuntu3) ...
544s Setting up librsvg2-2:s390x (2.59.90+dfsg-2) ...
544s Setting up r-base-core (4.4.3-1) ...
544s Creating config file /etc/R/Renviron with new version
544s Setting up r-cran-crayon (1.5.3-1) ...
544s Setting up r-cran-labeling (0.4.3-1) ...
544s Setting up r-cran-sourcetools (0.1.7-1-1) ...
544s Setting up r-cran-rsvg (2.6.1-1) ...
544s Setting up r-cran-lattice (0.22-6-1) ...
544s Setting up r-cran-nlme (3.1.167-1) ...
544s Setting up r-cran-farver (2.1.2-1) ...
544s Setting up r-cran-viridislite (0.4.2-2) ...
544s Setting up texlive-binaries (2024.20240313.70630+ds-5build2) ...
544s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
544s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
544s Setting up r-cran-lazyeval (0.2.2-1build1) ...
544s Setting up r-cran-commonmark (1.9.2-2) ...
544s Setting up g++-14 (14.2.0-17ubuntu3) ...
544s Setting up r-cran-rjson (0.2.23-1) ...
544s Setting up r-cran-r6 (2.6.1-1) ...
544s Setting up r-cran-pkgkitten (0.2.4-1) ...
544s Setting up gfortran-14 (14.2.0-17ubuntu3) ...
544s Setting up texlive-base (2024.20250114-1) ...
545s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
545s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
545s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
545s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex
545s Setting up r-cran-magrittr (2.0.3-1) ...
545s Setting up r-cran-rappdirs (0.3.3-1) ...
545s Setting up r-cran-littler (0.3.20-2) ...
545s Setting up r-cran-bh (1.84.0-1) ...
545s Setting up r-cran-fs (1.6.5+dfsg-1) ...
545s Setting up r-cran-rcpp (1.0.14-1) ...
545s Setting up r-cran-codetools (0.2-20-1) ...
545s Setting up r-bioc-biocgenerics (0.52.0-2) ...
545s Setting up r-cran-rlang (1.1.5-1) ...
545s Setting up littler (0.3.20-2) ...
545s Setting up gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
545s Setting up r-cran-xfun (0.51+dfsg-1) ...
545s Setting up r-cran-withr (3.0.2+dfsg-1) ...
545s Setting up r-cran-mime (0.12-2) ...
545s Setting up r-cran-base64enc (0.1-3-3) ...
545s Setting up r-cran-digest (0.6.37-1) ...
545s Setting up r-cran-yaml (2.3.10-1) ...
545s Setting up r-cran-evaluate (1.0.3-1) ...
545s Setting up r-cran-dbi (1.2.3-1) ...
545s Setting up r-cran-highr (0.11+dfsg-1) ...
545s Setting up r-cran-fansi (1.0.5-1) ...
545s Setting up r-cran-mass (7.3-64-1) ...
545s Setting up r-cran-glue (1.8.0-1) ...
545s Setting up r-cran-xtable (1:1.8-4-2) ...
545s Setting up r-cran-cli (3.6.4-1) ...
545s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
545s Setting up r-cran-bitops (1.0-9-1) ...
545s Setting up r-bioc-biocversion (3.20.0-2) ...
545s Setting up r-cran-biocmanager (1.30.25+dfsg-1) ...
545s Setting up gcc (4:14.2.0-1ubuntu1) ...
545s Setting up r-cran-fastmap (1.2.0-1) ...
545s Setting up r-cran-png (0.1-8-1build2) ...
545s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ...
545s Setting up r-cran-pkgconfig (2.0.3-2build1) ...
545s Setting up r-cran-utf8 (1.2.4-1) ...
545s Setting up r-cran-colorspace (2.1-1+dfsg-1) ...
545s Setting up r-cran-stringi (1.8.4-1build1) ...
545s Setting up texlive-latex-base (2024.20250114-1) ...
545s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ...
545s Setting up r-cran-isoband (0.2.7-1) ...
545s Setting up r-cran-runit (0.4.33-1) ...
545s Setting up r-cran-gtable (0.3.6+dfsg-1) ...
545s Setting up r-cran-later (1.4.1+dfsg-1) ...
545s Setting up r-cran-matrix (1.7-3-1) ...
545s Setting up r-cran-htmltools (0.5.8.1-1) ...
545s Setting up r-cran-tinytex (0.56-1) ...
545s Setting up r-cran-knitr (1.49+dfsg-1) ...
545s Setting up r-cran-mgcv (1.9-1-1) ...
545s Setting up g++ (4:14.2.0-1ubuntu1) ...
545s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
545s Setting up r-cran-cachem (1.1.0-1) ...
545s Setting up r-cran-sass (0.4.9+dfsg-1) ...
545s Setting up build-essential (12.10ubuntu1) ...
545s Setting up r-cran-rcurl (1.98-1.16+dfsg-1) ...
545s Setting up r-cran-vctrs (0.6.5-1) ...
545s Setting up r-cran-pillar (1.10.1+dfsg-1) ...
545s Setting up r-cran-munsell (0.5.1-1) ...
545s Setting up r-cran-tibble (3.2.1+dfsg-3) ...
545s Setting up r-cran-fontawesome (0.5.3-1) ...
545s Setting up gfortran (4:14.2.0-1ubuntu1) ...
545s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
545s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
545s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
545s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
545s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ...
545s Setting up texlive-bibtex-extra (2024.20250114-1) ...
545s Setting up r-cran-gridextra (2.3-3build1) ...
545s Setting up r-cran-scales (1.3.0-1) ...
545s Setting up r-cran-memoise (2.0.1-1) ...
545s Setting up r-cran-promises (1.3.2+dfsg-1) ...
545s Setting up r-base-dev (4.4.3-1) ...
545s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ...
545s Setting up r-cran-httpuv (1.6.15+dfsg-1) ...
545s Setting up r-cran-bslib (0.8.0+dfsg-1) ...
545s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
545s Setting up r-cran-shiny (1.10.0+dfsg-2) ...
545s Setting up r-cran-rmarkdown (2.29+dfsg-1) ...
545s Setting up r-cran-bookdown (0.42+dfsg-1) ...
545s Setting up r-cran-crosstalk (1.2.1+dfsg-1) ...
545s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ...
545s Setting up r-bioc-biocstyle (2.34.0+dfsg-1) ...
545s Setting up r-cran-dt (0.33+dfsg-1) ...
545s Setting up r-bioc-chemminer (3.58.0+dfsg-2) ...
545s Setting up r-bioc-fmcsr (1.48.0+dfsg-2) ...
545s Processing triggers for man-db (2.13.0-1) ...
547s Processing triggers for install-info (7.1.1-1) ...
547s Processing triggers for libc-bin (2.41-1ubuntu2) ...
547s Processing triggers for tex-common (6.19) ...
547s Running updmap-sys. This may take some time... done.
547s Running mktexlsr /var/lib/texmf ... done.
547s Building format(s) --all.
589s 	This may take some time... done.
590s autopkgtest [17:52:57]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
590s autopkgtest [17:52:57]: test pkg-r-autopkgtest: [-----------------------
590s Test: Try to load the R library fmcsR
590s 
590s R version 4.4.3 (2025-02-28) -- "Trophy Case"
590s Copyright (C) 2025 The R Foundation for Statistical Computing
590s Platform: s390x-ibm-linux-gnu
590s 
590s R is free software and comes with ABSOLUTELY NO WARRANTY.
590s You are welcome to redistribute it under certain conditions.
590s Type 'license()' or 'licence()' for distribution details.
590s 
590s R is a collaborative project with many contributors.
590s Type 'contributors()' for more information and
590s 'citation()' on how to cite R or R packages in publications.
590s 
590s Type 'demo()' for some demos, 'help()' for on-line help, or
590s 'help.start()' for an HTML browser interface to help.
590s Type 'q()' to quit R.
590s 
590s > library('fmcsR')
590s Loading required package: ChemmineR
591s > 
591s > 
591s Other tests are currently unsupported!
591s They will be progressively added.
591s autopkgtest [17:52:58]: test pkg-r-autopkgtest: -----------------------]
592s autopkgtest [17:52:59]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
592s pkg-r-autopkgtest    PASS
592s autopkgtest [17:52:59]: @@@@@@@@@@@@@@@@@@@@ summary
592s pkg-r-autopkgtest    PASS
598s nova [W] Using flock in prodstack6-s390x
598s flock: timeout while waiting to get lock
598s Creating nova instance adt-plucky-s390x-r-bioc-fmcsr-20250315-174307-juju-7f2275-prod-proposed-migration-environment-2-ab69a937-1959-44f5-870c-40e86592c1f3 from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)...
598s nova [W] Timed out waiting for a49c25f0-68a7-4ae3-b3ba-d9f70491a619 to get deleted.