0s autopkgtest [17:43:07]: starting date and time: 2025-03-15 17:43:07+0000
  0s autopkgtest [17:43:07]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production'
  0s autopkgtest [17:43:07]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.gbwp77ez/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-bioc-eir --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-s390x-13.secgroup --name adt-plucky-s390x-r-bioc-eir-20250315-174307-juju-7f2275-prod-proposed-migration-environment-2-25e11405-30f2-48e8-a726-bbca48527036 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/
133s autopkgtest [17:45:20]: testbed dpkg architecture: s390x
134s autopkgtest [17:45:21]: testbed apt version: 2.9.33
134s autopkgtest [17:45:21]: @@@@@@@@@@@@@@@@@@@@ test bed setup
134s autopkgtest [17:45:21]: testbed release detected to be: None
135s autopkgtest [17:45:22]: updating testbed package index (apt update)
135s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB]
136s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease
136s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease
136s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease
136s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB]
136s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB]
136s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB]
136s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [113 kB]
136s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1824 B]
136s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B]
136s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [320 kB]
136s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [13.4 kB]
136s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3776 B]
136s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [240 B]
136s Fetched 1073 kB in 1s (852 kB/s)
137s Reading package lists...
138s Reading package lists...
138s Building dependency tree...
138s Reading state information...
138s Calculating upgrade...
138s Calculating upgrade...
138s The following packages were automatically installed and are no longer required:
138s   libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64
138s   linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic
138s   linux-modules-6.11.0-8-generic linux-tools-6.11.0-8
138s   linux-tools-6.11.0-8-generic
138s Use 'sudo apt autoremove' to remove them.
138s The following packages will be upgraded:
138s   pinentry-curses python3-jinja2 strace
138s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
138s Need to get 652 kB of archives.
138s After this operation, 27.6 kB of additional disk space will be used.
138s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB]
139s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x pinentry-curses s390x 1.3.1-2ubuntu3 [42.9 kB]
139s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB]
139s Fetched 652 kB in 1s (835 kB/s)
139s (Reading database ... 
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(Reading database ... 81428 files and directories currently installed.)
139s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ...
139s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ...
139s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_s390x.deb ...
139s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ...
139s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ...
139s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ...
139s Setting up pinentry-curses (1.3.1-2ubuntu3) ...
139s Setting up python3-jinja2 (3.1.5-2ubuntu1) ...
140s Setting up strace (6.13+ds-1ubuntu1) ...
140s Processing triggers for man-db (2.13.0-1) ...
140s Reading package lists...
140s Building dependency tree...
140s Reading state information...
140s Solving dependencies...
140s The following packages will be REMOVED:
140s   libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64*
140s   linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic*
140s   linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8*
140s   linux-tools-6.11.0-8-generic*
141s 0 upgraded, 0 newly installed, 9 to remove and 5 not upgraded.
141s After this operation, 167 MB disk space will be freed.
141s (Reading database ... 
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 81428 files and directories currently installed.)
141s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ...
141s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ...
141s Removing libpython3.12t64:s390x (3.12.9-1) ...
141s Removing libpython3.12-stdlib:s390x (3.12.9-1) ...
141s Removing libnsl2:s390x (1.3.0-3build3) ...
141s Removing libpython3.12-minimal:s390x (3.12.9-1) ...
141s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ...
141s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ...
142s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
142s Processing triggers for libc-bin (2.41-1ubuntu1) ...
142s (Reading database ... 
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(Reading database ... 56328 files and directories currently installed.)
142s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ...
142s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ...
142s autopkgtest [17:45:29]: upgrading testbed (apt dist-upgrade and autopurge)
142s Reading package lists...
142s Building dependency tree...
142s Reading state information...
142s Calculating upgrade...Starting pkgProblemResolver with broken count: 0
142s Starting 2 pkgProblemResolver with broken count: 0
142s Done
142s Entering ResolveByKeep
143s 
143s Calculating upgrade...
143s The following packages will be upgraded:
143s   libc-bin libc-dev-bin libc6 libc6-dev locales
143s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
143s Need to get 9512 kB of archives.
143s After this operation, 8192 B of additional disk space will be used.
143s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6-dev s390x 2.41-1ubuntu2 [1678 kB]
144s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-dev-bin s390x 2.41-1ubuntu2 [24.3 kB]
144s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6 s390x 2.41-1ubuntu2 [2892 kB]
147s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-bin s390x 2.41-1ubuntu2 [671 kB]
148s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x locales all 2.41-1ubuntu2 [4246 kB]
152s Preconfiguring packages ...
152s Fetched 9512 kB in 9s (1099 kB/s)
152s (Reading database ... 
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(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
152s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_s390x.deb ...
152s Unpacking libc6-dev:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
152s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_s390x.deb ...
152s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
152s Preparing to unpack .../libc6_2.41-1ubuntu2_s390x.deb ...
152s Unpacking libc6:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
152s Setting up libc6:s390x (2.41-1ubuntu2) ...
152s (Reading database ... 
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(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
152s Preparing to unpack .../libc-bin_2.41-1ubuntu2_s390x.deb ...
152s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
152s Setting up libc-bin (2.41-1ubuntu2) ...
152s (Reading database ... 
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(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 56326 files and directories currently installed.)
152s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ...
152s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ...
152s Setting up locales (2.41-1ubuntu2) ...
152s Generating locales (this might take a while)...
153s   en_US.UTF-8... done
153s Generation complete.
153s Setting up libc-dev-bin (2.41-1ubuntu2) ...
153s Setting up libc6-dev:s390x (2.41-1ubuntu2) ...
153s Processing triggers for man-db (2.13.0-1) ...
154s Processing triggers for systemd (257.3-1ubuntu3) ...
155s Reading package lists...
155s Building dependency tree...
155s Reading state information...
155s Starting pkgProblemResolver with broken count: 0
155s Starting 2 pkgProblemResolver with broken count: 0
155s Done
155s Solving dependencies...
155s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
156s autopkgtest [17:45:43]: rebooting testbed after setup commands that affected boot
174s autopkgtest [17:46:01]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP Wed Mar 12 14:53:49 UTC 2025
176s autopkgtest [17:46:03]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-eir
178s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-eir 1.46.0+ds-2 (dsc) [2199 B]
178s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-eir 1.46.0+ds-2 (tar) [63.3 kB]
178s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-eir 1.46.0+ds-2 (diff) [5920 B]
178s gpgv: Signature made Sun Jan 12 02:34:52 2025 UTC
178s gpgv:                using RSA key 724D609337113C710550D7473C26763F6C67E6E2
178s gpgv:                issuer "crusoe@debian.org"
178s gpgv: Can't check signature: No public key
178s dpkg-source: warning: cannot verify inline signature for ./r-bioc-eir_1.46.0+ds-2.dsc: no acceptable signature found
178s autopkgtest [17:46:05]: testing package r-bioc-eir version 1.46.0+ds-2
179s autopkgtest [17:46:06]: build not needed
180s autopkgtest [17:46:07]: test pkg-r-autopkgtest: preparing testbed
181s Reading package lists...
181s Building dependency tree...
181s Reading state information...
181s Starting pkgProblemResolver with broken count: 0
181s Starting 2 pkgProblemResolver with broken count: 0
181s Done
181s The following NEW packages will be installed:
181s   build-essential cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu
181s   dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
181s   fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax
181s   g++ g++-14 g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14
181s   gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-14
181s   gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools
181s   javascript-common libasan8 libbibtex-parser-perl libblas-dev libblas3
181s   libboost-dev libboost1.83-dev libbz2-dev libcairo-gobject2 libcairo2
181s   libcc1-0 libdatrie1 libdeflate-dev libdeflate0 libfontconfig1 libfreetype6
181s   libgcc-14-dev libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgfortran-14-dev
181s   libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b libice6 libicu-dev
181s   libio-string-perl libisl23 libitm1 libjbig0 libjpeg-dev libjpeg-turbo8
181s   libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap libjs-bootstrap4
181s   libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery
181s   libjs-jquery-datatables libjs-jquery-datatables-extensions
181s   libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr
181s   libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js
181s   libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker
181s   libkpathsea6 liblapack-dev liblapack3 liblatex-tounicode-perl liblua5.4-0
181s   liblzma-dev libmpc3 libmpfi0 libncurses-dev libpango-1.0-0
181s   libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper2 libpcre2-16-0
181s   libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpixman-1-0 libpkgconf3
181s   libpng-dev libpotrace0 libptexenc1 libreadline-dev librsvg2-2 libsharpyuv0
181s   libsm6 libstdc++-14-dev libsynctex2 libtcl8.6 libteckit0 libtexlua53-5
181s   libthai-data libthai0 libtiff6 libtirpc-dev libtk8.6 libubsan1 libwebp7
181s   libxaw7 libxcb-render0 libxcb-shm0 libxft2 libxi6 libxmu6 libxpm4
181s   libxrender1 libxss1 libxt6t64 libzzip-0-13t64 littler node-bootstrap-sass
181s   node-html5shiv node-normalize.css pandoc pandoc-data pkg-r-autopkgtest
181s   pkgconf pkgconf-bin r-base-core r-base-dev r-bioc-biocgenerics
181s   r-bioc-biocstyle r-bioc-biocversion r-bioc-chemminer r-bioc-eir
181s   r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64
181s   r-cran-bitops r-cran-blob r-cran-bookdown r-cran-bslib r-cran-cachem
181s   r-cran-cli r-cran-colorspace r-cran-commonmark r-cran-cpp11 r-cran-crayon
181s   r-cran-crosstalk r-cran-dbi r-cran-digest r-cran-dt r-cran-evaluate
181s   r-cran-fansi r-cran-farver r-cran-fastmap r-cran-fontawesome r-cran-fs
181s   r-cran-ggplot2 r-cran-glue r-cran-gridextra r-cran-gtable r-cran-highr
181s   r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-isoband
181s   r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-labeling r-cran-later
181s   r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler
181s   r-cran-magrittr r-cran-mass r-cran-matrix r-cran-memoise r-cran-mgcv
181s   r-cran-mime r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgconfig
181s   r-cran-pkgkitten r-cran-plogr r-cran-png r-cran-promises r-cran-r6
181s   r-cran-rappdirs r-cran-rcolorbrewer r-cran-rcpp r-cran-rcppannoy
181s   r-cran-rcurl r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite
181s   r-cran-rsvg r-cran-runit r-cran-sass r-cran-scales r-cran-shiny r-cran-snow
181s   r-cran-snowfall r-cran-sourcetools r-cran-stringi r-cran-tibble
181s   r-cran-tinytex r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-withr
181s   r-cran-xfun r-cran-xtable r-cran-yaml t1utils tex-common texlive-base
181s   texlive-bibtex-extra texlive-binaries texlive-latex-base unzip x11-common
181s   xdg-utils zip zlib1g-dev
181s 0 upgraded, 243 newly installed, 0 to remove and 0 not upgraded.
181s Need to get 380 MB of archives.
181s After this operation, 1349 MB of additional disk space will be used.
181s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libisl23 s390x 0.27-1 [704 kB]
182s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB]
182s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [9572 kB]
193s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14 s390x 14.2.0-17ubuntu3 [1028 B]
193s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [5556 B]
193s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x cpp s390x 4:14.2.0-1ubuntu1 [22.4 kB]
193s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libcc1-0 s390x 15-20250222-0ubuntu1 [49.2 kB]
193s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 15-20250222-0ubuntu1 [152 kB]
193s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libitm1 s390x 15-20250222-0ubuntu1 [31.2 kB]
193s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libasan8 s390x 15-20250222-0ubuntu1 [2970 kB]
196s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libubsan1 s390x 15-20250222-0ubuntu1 [1212 kB]
197s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-14-dev s390x 14.2.0-17ubuntu3 [1037 kB]
198s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [18.7 MB]
214s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14 s390x 14.2.0-17ubuntu3 [526 kB]
215s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1204 B]
215s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x gcc s390x 4:14.2.0-1ubuntu1 [5004 B]
215s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++-14-dev s390x 14.2.0-17ubuntu3 [2611 kB]
217s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [11.0 MB]
225s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14 s390x 14.2.0-17ubuntu3 [21.8 kB]
225s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x g++-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [956 B]
225s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x g++ s390x 4:14.2.0-1ubuntu1 [1080 B]
225s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x build-essential s390x 12.10ubuntu1 [4930 B]
225s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x dctrl-tools s390x 2.24-3build3 [106 kB]
225s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB]
226s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB]
226s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB]
227s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-2ubuntu1 [37.5 kB]
227s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-2ubuntu1 [150 kB]
227s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig s390x 2.15.0-2ubuntu1 [191 kB]
227s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB]
228s Get:31 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB]
228s Get:32 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-lmodern all 2.005-1 [4799 kB]
232s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB]
234s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 15-20250222-0ubuntu1 [620 kB]
234s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran-14-dev s390x 14.2.0-17ubuntu3 [654 kB]
235s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [10.3 MB]
244s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14 s390x 14.2.0-17ubuntu3 [13.6 kB]
244s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1012 B]
244s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran s390x 4:14.2.0-1ubuntu1 [1160 B]
244s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x icu-devtools s390x 76.1-1ubuntu2 [225 kB]
245s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x javascript-common all 12 [5216 B]
245s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libio-string-perl all 1.08-4 [11.1 kB]
245s Get:43 http://ftpmaster.internal/ubuntu plucky/universe s390x liblatex-tounicode-perl all 0.55-1 [28.8 kB]
245s Get:44 http://ftpmaster.internal/ubuntu plucky/universe s390x libbibtex-parser-perl all 1.05+dfsg-1 [16.5 kB]
245s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.1-2 [252 kB]
245s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x libblas-dev s390x 3.12.1-2 [254 kB]
245s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x libboost1.83-dev s390x 1.83.0-4.1ubuntu2 [10.7 MB]
254s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x libboost-dev s390x 1.83.0.2ubuntu1 [4470 B]
254s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x libbz2-dev s390x 1.0.8-6 [39.1 kB]
254s Get:50 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB]
255s Get:51 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB]
255s Get:52 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B]
255s Get:53 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB]
255s Get:54 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB]
255s Get:55 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo-gobject2 s390x 1.18.2-2 [127 kB]
255s Get:56 http://ftpmaster.internal/ubuntu plucky/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB]
255s Get:57 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.23-1 [46.1 kB]
255s Get:58 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate-dev s390x 1.23-1 [52.2 kB]
255s Get:59 http://ftpmaster.internal/ubuntu plucky/main s390x libgdk-pixbuf2.0-common all 2.42.12+dfsg-2 [8004 B]
255s Get:60 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB]
255s Get:61 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B]
255s Get:62 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB]
256s Get:63 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB]
256s Get:64 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB]
256s Get:65 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB]
256s Get:66 http://ftpmaster.internal/ubuntu plucky/main s390x libgdk-pixbuf-2.0-0 s390x 2.42.12+dfsg-2 [154 kB]
256s Get:67 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB]
256s Get:68 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB]
257s Get:69 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB]
257s Get:70 http://ftpmaster.internal/ubuntu plucky/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB]
257s Get:71 http://ftpmaster.internal/ubuntu plucky/main s390x libicu-dev s390x 76.1-1ubuntu2 [12.2 MB]
268s Get:72 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8-dev s390x 2.1.5-3ubuntu2 [281 kB]
269s Get:73 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B]
269s Get:74 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B]
269s Get:75 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB]
269s Get:76 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-popper.js all 1.16.1+ds-6 [54.1 kB]
269s Get:77 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB]
269s Get:78 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-d3 all 3.5.17-4 [132 kB]
269s Get:79 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-es5-shim all 4.6.7-2 [39.8 kB]
269s Get:80 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB]
270s Get:81 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB]
270s Get:82 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB]
270s Get:83 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-datatables-extensions all 0.0+git20150910.28fd64e+dfsg-5 [648 kB]
270s Get:84 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB]
270s Get:85 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B]
270s Get:86 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB]
270s Get:87 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB]
271s Get:88 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-json all 0~20221030+~1.0.8-1 [20.6 kB]
271s Get:89 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-lunr all 2.3.9~dfsg-2 [66.8 kB]
271s Get:90 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB]
271s Get:91 http://ftpmaster.internal/ubuntu plucky/main s390x libkpathsea6 s390x 2024.20240313.70630+ds-5build2 [66.9 kB]
271s Get:92 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.1-2 [2971 kB]
273s Get:93 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack-dev s390x 3.12.1-2 [5967 kB]
277s Get:94 http://ftpmaster.internal/ubuntu plucky/main s390x liblua5.4-0 s390x 5.4.7-1 [174 kB]
277s Get:95 http://ftpmaster.internal/ubuntu plucky/universe s390x libmpfi0 s390x 1.5.4+ds-4 [34.1 kB]
277s Get:96 http://ftpmaster.internal/ubuntu plucky/main s390x libncurses-dev s390x 6.5+20250216-2 [407 kB]
277s Get:97 http://ftpmaster.internal/ubuntu plucky/main s390x libthai-data all 0.1.29-2build1 [158 kB]
277s Get:98 http://ftpmaster.internal/ubuntu plucky/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB]
277s Get:99 http://ftpmaster.internal/ubuntu plucky/main s390x libpango-1.0-0 s390x 1.56.2-1 [253 kB]
278s Get:100 http://ftpmaster.internal/ubuntu plucky/main s390x libpangoft2-1.0-0 s390x 1.56.2-1 [50.2 kB]
278s Get:101 http://ftpmaster.internal/ubuntu plucky/main s390x libpangocairo-1.0-0 s390x 1.56.2-1 [28.2 kB]
278s Get:102 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB]
278s Get:103 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB]
278s Get:104 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-16-0 s390x 10.45-1 [259 kB]
278s Get:105 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-32-0 s390x 10.45-1 [245 kB]
278s Get:106 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-posix3 s390x 10.45-1 [7080 B]
278s Get:107 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-dev s390x 10.45-1 [899 kB]
279s Get:108 http://ftpmaster.internal/ubuntu plucky/main s390x libpkgconf3 s390x 1.8.1-4 [31.2 kB]
279s Get:109 http://ftpmaster.internal/ubuntu plucky/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB]
280s Get:110 http://ftpmaster.internal/ubuntu plucky/main s390x libpng-dev s390x 1.6.47-1 [278 kB]
280s Get:111 http://ftpmaster.internal/ubuntu plucky/universe s390x libpotrace0 s390x 1.16-2build1 [18.7 kB]
280s Get:112 http://ftpmaster.internal/ubuntu plucky/main s390x libptexenc1 s390x 2024.20240313.70630+ds-5build2 [43.4 kB]
280s Get:113 http://ftpmaster.internal/ubuntu plucky/main s390x libreadline-dev s390x 8.2-6 [187 kB]
280s Get:114 http://ftpmaster.internal/ubuntu plucky/main s390x librsvg2-2 s390x 2.59.90+dfsg-2 [1986 kB]
281s Get:115 http://ftpmaster.internal/ubuntu plucky/main s390x libsm6 s390x 2:1.2.4-1 [18.4 kB]
281s Get:116 http://ftpmaster.internal/ubuntu plucky/main s390x libsynctex2 s390x 2024.20240313.70630+ds-5build2 [64.6 kB]
281s Get:117 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB]
282s Get:118 http://ftpmaster.internal/ubuntu plucky/universe s390x libteckit0 s390x 2.5.12+ds1-1 [433 kB]
282s Get:119 http://ftpmaster.internal/ubuntu plucky/main s390x libtexlua53-5 s390x 2024.20240313.70630+ds-5build2 [131 kB]
283s Get:120 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB]
283s Get:121 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B]
283s Get:122 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.16-1 [830 kB]
283s Get:123 http://ftpmaster.internal/ubuntu plucky/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB]
283s Get:124 http://ftpmaster.internal/ubuntu plucky/main s390x libxmu6 s390x 2:1.1.3-3build2 [53.0 kB]
283s Get:125 http://ftpmaster.internal/ubuntu plucky/main s390x libxpm4 s390x 1:3.5.17-1build2 [41.2 kB]
283s Get:126 http://ftpmaster.internal/ubuntu plucky/main s390x libxaw7 s390x 2:1.0.16-1 [201 kB]
284s Get:127 http://ftpmaster.internal/ubuntu plucky/main s390x libxi6 s390x 2:1.8.2-1 [35.4 kB]
284s Get:128 http://ftpmaster.internal/ubuntu plucky/universe s390x libzzip-0-13t64 s390x 0.13.78+dfsg.1-0.1 [29.8 kB]
284s Get:129 http://ftpmaster.internal/ubuntu plucky/main s390x zip s390x 3.0-14ubuntu2 [187 kB]
284s Get:130 http://ftpmaster.internal/ubuntu plucky/main s390x unzip s390x 6.0-28ubuntu6 [186 kB]
284s Get:131 http://ftpmaster.internal/ubuntu plucky/main s390x xdg-utils all 1.2.1-2ubuntu1 [66.0 kB]
284s Get:132 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-core s390x 4.4.3-1 [28.6 MB]
314s Get:133 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-littler s390x 0.3.20-2 [95.0 kB]
314s Get:134 http://ftpmaster.internal/ubuntu plucky/universe s390x littler all 0.3.20-2 [2554 B]
314s Get:135 http://ftpmaster.internal/ubuntu plucky/universe s390x node-bootstrap-sass all 3.4.3-2 [187 kB]
314s Get:136 http://ftpmaster.internal/ubuntu plucky/universe s390x node-html5shiv all 3.7.3+dfsg-5 [13.5 kB]
314s Get:137 http://ftpmaster.internal/ubuntu plucky/universe s390x node-normalize.css all 8.0.1-5 [10.8 kB]
314s Get:138 http://ftpmaster.internal/ubuntu plucky/universe s390x pandoc-data all 3.1.11.1-3build1 [78.8 kB]
314s Get:139 http://ftpmaster.internal/ubuntu plucky/universe s390x pandoc s390x 3.1.11.1+ds-2 [52.5 MB]
362s Get:140 http://ftpmaster.internal/ubuntu plucky/main s390x liblzma-dev s390x 5.6.4-1 [183 kB]
362s Get:141 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf-bin s390x 1.8.1-4 [21.5 kB]
362s Get:142 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf s390x 1.8.1-4 [16.7 kB]
363s Get:143 http://ftpmaster.internal/ubuntu plucky/main s390x libtirpc-dev s390x 1.3.4+ds-1.3 [196 kB]
363s Get:144 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-dev all 4.4.3-1 [4176 B]
363s Get:145 http://ftpmaster.internal/ubuntu plucky/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B]
363s Get:146 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocgenerics all 0.52.0-2 [624 kB]
363s Get:147 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-base64enc s390x 0.1-3-3 [28.0 kB]
363s Get:148 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-digest s390x 0.6.37-1 [205 kB]
364s Get:149 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fastmap s390x 1.2.0-1 [72.4 kB]
364s Get:150 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rlang s390x 1.1.5-1 [1713 kB]
365s Get:151 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-htmltools s390x 0.5.8.1-1 [372 kB]
366s Get:152 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-evaluate all 1.0.3-1 [114 kB]
366s Get:153 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-xfun s390x 0.51+dfsg-1 [574 kB]
366s Get:154 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-highr all 0.11+dfsg-1 [38.5 kB]
366s Get:155 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-yaml s390x 2.3.10-1 [113 kB]
366s Get:156 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB]
372s Get:157 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-knitr all 1.49+dfsg-1 [859 kB]
373s Get:158 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cachem s390x 1.1.0-1 [74.0 kB]
373s Get:159 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB]
373s Get:160 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-jsonlite s390x 1.9.1+dfsg-1 [447 kB]
373s Get:161 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cli s390x 3.6.4-1 [1379 kB]
375s Get:162 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-glue s390x 1.8.0-1 [164 kB]
375s Get:163 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB]
375s Get:164 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-memoise all 2.0.1-1 [53.9 kB]
375s Get:165 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mime s390x 0.12-2 [35.8 kB]
375s Get:166 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fs s390x 1.6.5+dfsg-1 [245 kB]
375s Get:167 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r6 all 2.6.1-1 [101 kB]
375s Get:168 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rappdirs s390x 0.3.3-1 [47.5 kB]
375s Get:169 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sass s390x 0.4.9+dfsg-1 [1019 kB]
377s Get:170 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bslib all 0.8.0+dfsg-1 [4294 kB]
381s Get:171 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fontawesome all 0.5.3-1 [1331 kB]
382s Get:172 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tinytex all 0.56-1 [148 kB]
382s Get:173 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-modernizr all 3.13.0-0.1 [101 kB]
382s Get:174 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgkitten all 0.2.4-1 [27.2 kB]
382s Get:175 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcpp s390x 1.0.14-1 [2003 kB]
384s Get:176 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-later s390x 1.4.1+dfsg-1 [148 kB]
384s Get:177 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB]
385s Get:178 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-promises s390x 1.3.2+dfsg-1 [296 kB]
385s Get:179 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-httpuv s390x 1.6.15+dfsg-1 [507 kB]
385s Get:180 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-xtable all 1:1.8-4-2 [689 kB]
386s Get:181 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sourcetools s390x 0.1.7-1-1 [47.1 kB]
386s Get:182 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-crayon all 1.5.3-1 [165 kB]
386s Get:183 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-withr all 3.0.2+dfsg-1 [214 kB]
386s Get:184 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-commonmark s390x 1.9.2-2 [142 kB]
387s Get:185 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB]
387s Get:186 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-shiny all 1.10.0+dfsg-2 [3124 kB]
389s Get:187 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB]
391s Get:188 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bookdown all 0.42+dfsg-1 [1409 kB]
392s Get:189 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB]
392s Get:190 http://ftpmaster.internal/ubuntu plucky/universe s390x tex-common all 6.19 [29.8 kB]
392s Get:191 http://ftpmaster.internal/ubuntu plucky/main s390x t1utils s390x 1.41-4build3 [65.6 kB]
392s Get:192 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-binaries s390x 2024.20240313.70630+ds-5build2 [9171 kB]
399s Get:193 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-base all 2024.20250114-1 [22.5 MB]
419s Get:194 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-latex-base all 2024.20250114-1 [1264 kB]
420s Get:195 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-bibtex-extra all 2024.20250114-1 [79.5 MB]
497s Get:196 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocversion all 3.20.0-2 [11.1 kB]
497s Get:197 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocstyle all 2.34.0+dfsg-1 [451 kB]
497s Get:198 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rjson s390x 0.2.23-1 [104 kB]
498s Get:199 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bitops s390x 1.0-9-1 [30.1 kB]
498s Get:200 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcurl s390x 1.98-1.16+dfsg-1 [808 kB]
498s Get:201 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-dbi all 1.2.3-1 [853 kB]
499s Get:202 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-gtable all 0.3.6+dfsg-1 [199 kB]
499s Get:203 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-isoband s390x 0.2.7-1 [1481 kB]
501s Get:204 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mass s390x 7.3-64-1 [1113 kB]
502s Get:205 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lattice s390x 0.22-6-1 [1340 kB]
503s Get:206 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-nlme s390x 3.1.167-1 [2323 kB]
506s Get:207 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-matrix s390x 1.7-3-1 [4449 kB]
510s Get:208 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mgcv s390x 1.9-1-1 [3348 kB]
512s Get:209 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-farver s390x 2.1.2-1 [1353 kB]
513s Get:210 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-labeling all 0.4.3-1 [62.1 kB]
514s Get:211 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-colorspace s390x 2.1-1+dfsg-1 [1567 kB]
515s Get:212 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-munsell all 0.5.1-1 [213 kB]
515s Get:213 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcolorbrewer all 1.1-3-1build1 [55.4 kB]
515s Get:214 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-viridislite all 0.4.2-2 [1088 kB]
516s Get:215 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-scales all 1.3.0-1 [603 kB]
517s Get:216 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fansi s390x 1.0.5-1 [615 kB]
517s Get:217 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-utf8 s390x 1.2.4-1 [143 kB]
517s Get:218 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB]
518s Get:219 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pillar all 1.10.1+dfsg-1 [453 kB]
519s Get:220 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB]
519s Get:221 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tibble s390x 3.2.1+dfsg-3 [420 kB]
519s Get:222 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ggplot2 all 3.5.1+dfsg-1 [3940 kB]
522s Get:223 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-gridextra all 2.3-3build1 [1024 kB]
523s Get:224 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-png s390x 0.1-8-1build2 [41.5 kB]
523s Get:225 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB]
523s Get:226 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lazyeval s390x 0.2.2-1build1 [143 kB]
523s Get:227 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-crosstalk all 1.2.1+dfsg-1 [177 kB]
523s Get:228 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-dt all 0.33+dfsg-1 [250 kB]
524s Get:229 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rsvg s390x 2.6.1-1 [272 kB]
524s Get:230 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-stringi s390x 1.8.4-1build1 [917 kB]
525s Get:231 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bh all 1.84.0-1 [5962 B]
525s Get:232 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-chemminer s390x 3.58.0+dfsg-2 [1204 kB]
526s Get:233 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-snow all 1:0.4.4-2 [97.6 kB]
526s Get:234 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-snowfall all 1.84-6.3-1 [248 kB]
526s Get:235 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-runit all 0.4.33-1 [377 kB]
526s Get:236 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcppannoy s390x 0.0.22-1 [246 kB]
527s Get:237 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-eir s390x 1.46.0+ds-2 [208 kB]
527s Get:238 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bit s390x 4.6.0+dfsg-1 [471 kB]
527s Get:239 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bit64 s390x 4.6.0-1-1ubuntu2 [503 kB]
528s Get:240 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-blob all 1.2.4-1 [49.8 kB]
528s Get:241 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cpp11 all 0.5.2-1 [233 kB]
528s Get:242 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-plogr all 0.2.0-3build1 [15.1 kB]
528s Get:243 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rsqlite s390x 2.3.9-1 [1331 kB]
530s Preconfiguring packages ...
530s Fetched 380 MB in 5min 48s (1091 kB/s)
530s Selecting previously unselected package libisl23:s390x.
530s (Reading database ... 
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530s Preparing to unpack .../000-libisl23_0.27-1_s390x.deb ...
530s Unpacking libisl23:s390x (0.27-1) ...
530s Selecting previously unselected package libmpc3:s390x.
530s Preparing to unpack .../001-libmpc3_1.3.1-1build2_s390x.deb ...
530s Unpacking libmpc3:s390x (1.3.1-1build2) ...
530s Selecting previously unselected package cpp-14-s390x-linux-gnu.
530s Preparing to unpack .../002-cpp-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
530s Unpacking cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
530s Selecting previously unselected package cpp-14.
530s Preparing to unpack .../003-cpp-14_14.2.0-17ubuntu3_s390x.deb ...
530s Unpacking cpp-14 (14.2.0-17ubuntu3) ...
530s Selecting previously unselected package cpp-s390x-linux-gnu.
530s Preparing to unpack .../004-cpp-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
530s Unpacking cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
530s Selecting previously unselected package cpp.
530s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_s390x.deb ...
530s Unpacking cpp (4:14.2.0-1ubuntu1) ...
530s Selecting previously unselected package libcc1-0:s390x.
530s Preparing to unpack .../006-libcc1-0_15-20250222-0ubuntu1_s390x.deb ...
530s Unpacking libcc1-0:s390x (15-20250222-0ubuntu1) ...
530s Selecting previously unselected package libgomp1:s390x.
530s Preparing to unpack .../007-libgomp1_15-20250222-0ubuntu1_s390x.deb ...
530s Unpacking libgomp1:s390x (15-20250222-0ubuntu1) ...
530s Selecting previously unselected package libitm1:s390x.
530s Preparing to unpack .../008-libitm1_15-20250222-0ubuntu1_s390x.deb ...
530s Unpacking libitm1:s390x (15-20250222-0ubuntu1) ...
530s Selecting previously unselected package libasan8:s390x.
530s Preparing to unpack .../009-libasan8_15-20250222-0ubuntu1_s390x.deb ...
530s Unpacking libasan8:s390x (15-20250222-0ubuntu1) ...
530s Selecting previously unselected package libubsan1:s390x.
530s Preparing to unpack .../010-libubsan1_15-20250222-0ubuntu1_s390x.deb ...
530s Unpacking libubsan1:s390x (15-20250222-0ubuntu1) ...
530s Selecting previously unselected package libgcc-14-dev:s390x.
530s Preparing to unpack .../011-libgcc-14-dev_14.2.0-17ubuntu3_s390x.deb ...
530s Unpacking libgcc-14-dev:s390x (14.2.0-17ubuntu3) ...
530s Selecting previously unselected package gcc-14-s390x-linux-gnu.
530s Preparing to unpack .../012-gcc-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
530s Unpacking gcc-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
530s Selecting previously unselected package gcc-14.
530s Preparing to unpack .../013-gcc-14_14.2.0-17ubuntu3_s390x.deb ...
530s Unpacking gcc-14 (14.2.0-17ubuntu3) ...
530s Selecting previously unselected package gcc-s390x-linux-gnu.
530s Preparing to unpack .../014-gcc-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
530s Unpacking gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
530s Selecting previously unselected package gcc.
530s Preparing to unpack .../015-gcc_4%3a14.2.0-1ubuntu1_s390x.deb ...
530s Unpacking gcc (4:14.2.0-1ubuntu1) ...
530s Selecting previously unselected package libstdc++-14-dev:s390x.
530s Preparing to unpack .../016-libstdc++-14-dev_14.2.0-17ubuntu3_s390x.deb ...
530s Unpacking libstdc++-14-dev:s390x (14.2.0-17ubuntu3) ...
531s Selecting previously unselected package g++-14-s390x-linux-gnu.
531s Preparing to unpack .../017-g++-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
531s Unpacking g++-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
531s Selecting previously unselected package g++-14.
531s Preparing to unpack .../018-g++-14_14.2.0-17ubuntu3_s390x.deb ...
531s Unpacking g++-14 (14.2.0-17ubuntu3) ...
531s Selecting previously unselected package g++-s390x-linux-gnu.
531s Preparing to unpack .../019-g++-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
531s Unpacking g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
531s Selecting previously unselected package g++.
531s Preparing to unpack .../020-g++_4%3a14.2.0-1ubuntu1_s390x.deb ...
531s Unpacking g++ (4:14.2.0-1ubuntu1) ...
531s Selecting previously unselected package build-essential.
531s Preparing to unpack .../021-build-essential_12.10ubuntu1_s390x.deb ...
531s Unpacking build-essential (12.10ubuntu1) ...
531s Selecting previously unselected package dctrl-tools.
531s Preparing to unpack .../022-dctrl-tools_2.24-3build3_s390x.deb ...
531s Unpacking dctrl-tools (2.24-3build3) ...
531s Selecting previously unselected package libfreetype6:s390x.
531s Preparing to unpack .../023-libfreetype6_2.13.3+dfsg-1_s390x.deb ...
531s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ...
531s Selecting previously unselected package fonts-dejavu-mono.
531s Preparing to unpack .../024-fonts-dejavu-mono_2.37-8_all.deb ...
531s Unpacking fonts-dejavu-mono (2.37-8) ...
531s Selecting previously unselected package fonts-dejavu-core.
531s Preparing to unpack .../025-fonts-dejavu-core_2.37-8_all.deb ...
531s Unpacking fonts-dejavu-core (2.37-8) ...
531s Selecting previously unselected package fontconfig-config.
531s Preparing to unpack .../026-fontconfig-config_2.15.0-2ubuntu1_s390x.deb ...
531s Unpacking fontconfig-config (2.15.0-2ubuntu1) ...
531s Selecting previously unselected package libfontconfig1:s390x.
531s Preparing to unpack .../027-libfontconfig1_2.15.0-2ubuntu1_s390x.deb ...
531s Unpacking libfontconfig1:s390x (2.15.0-2ubuntu1) ...
531s Selecting previously unselected package fontconfig.
531s Preparing to unpack .../028-fontconfig_2.15.0-2ubuntu1_s390x.deb ...
531s Unpacking fontconfig (2.15.0-2ubuntu1) ...
531s Selecting previously unselected package fonts-font-awesome.
531s Preparing to unpack .../029-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ...
531s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ...
531s Selecting previously unselected package fonts-glyphicons-halflings.
531s Preparing to unpack .../030-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ...
531s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ...
531s Selecting previously unselected package fonts-lmodern.
531s Preparing to unpack .../031-fonts-lmodern_2.005-1_all.deb ...
531s Unpacking fonts-lmodern (2.005-1) ...
531s Selecting previously unselected package fonts-mathjax.
531s Preparing to unpack .../032-fonts-mathjax_2.7.9+dfsg-1_all.deb ...
531s Unpacking fonts-mathjax (2.7.9+dfsg-1) ...
531s Selecting previously unselected package libgfortran5:s390x.
531s Preparing to unpack .../033-libgfortran5_15-20250222-0ubuntu1_s390x.deb ...
531s Unpacking libgfortran5:s390x (15-20250222-0ubuntu1) ...
531s Selecting previously unselected package libgfortran-14-dev:s390x.
531s Preparing to unpack .../034-libgfortran-14-dev_14.2.0-17ubuntu3_s390x.deb ...
531s Unpacking libgfortran-14-dev:s390x (14.2.0-17ubuntu3) ...
531s Selecting previously unselected package gfortran-14-s390x-linux-gnu.
531s Preparing to unpack .../035-gfortran-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ...
531s Unpacking gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
531s Selecting previously unselected package gfortran-14.
531s Preparing to unpack .../036-gfortran-14_14.2.0-17ubuntu3_s390x.deb ...
531s Unpacking gfortran-14 (14.2.0-17ubuntu3) ...
531s Selecting previously unselected package gfortran-s390x-linux-gnu.
531s Preparing to unpack .../037-gfortran-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ...
531s Unpacking gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
531s Selecting previously unselected package gfortran.
531s Preparing to unpack .../038-gfortran_4%3a14.2.0-1ubuntu1_s390x.deb ...
531s Unpacking gfortran (4:14.2.0-1ubuntu1) ...
531s Selecting previously unselected package icu-devtools.
531s Preparing to unpack .../039-icu-devtools_76.1-1ubuntu2_s390x.deb ...
531s Unpacking icu-devtools (76.1-1ubuntu2) ...
531s Selecting previously unselected package javascript-common.
531s Preparing to unpack .../040-javascript-common_12_all.deb ...
531s Unpacking javascript-common (12) ...
531s Selecting previously unselected package libio-string-perl.
531s Preparing to unpack .../041-libio-string-perl_1.08-4_all.deb ...
531s Unpacking libio-string-perl (1.08-4) ...
531s Selecting previously unselected package liblatex-tounicode-perl.
531s Preparing to unpack .../042-liblatex-tounicode-perl_0.55-1_all.deb ...
531s Unpacking liblatex-tounicode-perl (0.55-1) ...
532s Selecting previously unselected package libbibtex-parser-perl.
532s Preparing to unpack .../043-libbibtex-parser-perl_1.05+dfsg-1_all.deb ...
532s Unpacking libbibtex-parser-perl (1.05+dfsg-1) ...
532s Selecting previously unselected package libblas3:s390x.
532s Preparing to unpack .../044-libblas3_3.12.1-2_s390x.deb ...
532s Unpacking libblas3:s390x (3.12.1-2) ...
532s Selecting previously unselected package libblas-dev:s390x.
532s Preparing to unpack .../045-libblas-dev_3.12.1-2_s390x.deb ...
532s Unpacking libblas-dev:s390x (3.12.1-2) ...
532s Selecting previously unselected package libboost1.83-dev:s390x.
532s Preparing to unpack .../046-libboost1.83-dev_1.83.0-4.1ubuntu2_s390x.deb ...
532s Unpacking libboost1.83-dev:s390x (1.83.0-4.1ubuntu2) ...
533s Selecting previously unselected package libboost-dev:s390x.
533s Preparing to unpack .../047-libboost-dev_1.83.0.2ubuntu1_s390x.deb ...
533s Unpacking libboost-dev:s390x (1.83.0.2ubuntu1) ...
533s Selecting previously unselected package libbz2-dev:s390x.
533s Preparing to unpack .../048-libbz2-dev_1.0.8-6_s390x.deb ...
533s Unpacking libbz2-dev:s390x (1.0.8-6) ...
533s Selecting previously unselected package libpixman-1-0:s390x.
533s Preparing to unpack .../049-libpixman-1-0_0.44.0-3_s390x.deb ...
533s Unpacking libpixman-1-0:s390x (0.44.0-3) ...
533s Selecting previously unselected package libxcb-render0:s390x.
533s Preparing to unpack .../050-libxcb-render0_1.17.0-2_s390x.deb ...
533s Unpacking libxcb-render0:s390x (1.17.0-2) ...
533s Selecting previously unselected package libxcb-shm0:s390x.
533s Preparing to unpack .../051-libxcb-shm0_1.17.0-2_s390x.deb ...
533s Unpacking libxcb-shm0:s390x (1.17.0-2) ...
533s Selecting previously unselected package libxrender1:s390x.
533s Preparing to unpack .../052-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ...
533s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ...
533s Selecting previously unselected package libcairo2:s390x.
533s Preparing to unpack .../053-libcairo2_1.18.2-2_s390x.deb ...
533s Unpacking libcairo2:s390x (1.18.2-2) ...
533s Selecting previously unselected package libcairo-gobject2:s390x.
533s Preparing to unpack .../054-libcairo-gobject2_1.18.2-2_s390x.deb ...
533s Unpacking libcairo-gobject2:s390x (1.18.2-2) ...
533s Selecting previously unselected package libdatrie1:s390x.
533s Preparing to unpack .../055-libdatrie1_0.2.13-3build1_s390x.deb ...
533s Unpacking libdatrie1:s390x (0.2.13-3build1) ...
533s Selecting previously unselected package libdeflate0:s390x.
533s Preparing to unpack .../056-libdeflate0_1.23-1_s390x.deb ...
533s Unpacking libdeflate0:s390x (1.23-1) ...
533s Selecting previously unselected package libdeflate-dev:s390x.
533s Preparing to unpack .../057-libdeflate-dev_1.23-1_s390x.deb ...
533s Unpacking libdeflate-dev:s390x (1.23-1) ...
533s Selecting previously unselected package libgdk-pixbuf2.0-common.
533s Preparing to unpack .../058-libgdk-pixbuf2.0-common_2.42.12+dfsg-2_all.deb ...
533s Unpacking libgdk-pixbuf2.0-common (2.42.12+dfsg-2) ...
533s Selecting previously unselected package libjpeg-turbo8:s390x.
533s Preparing to unpack .../059-libjpeg-turbo8_2.1.5-3ubuntu2_s390x.deb ...
533s Unpacking libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ...
533s Selecting previously unselected package libjpeg8:s390x.
533s Preparing to unpack .../060-libjpeg8_8c-2ubuntu11_s390x.deb ...
533s Unpacking libjpeg8:s390x (8c-2ubuntu11) ...
533s Selecting previously unselected package libjbig0:s390x.
533s Preparing to unpack .../061-libjbig0_2.1-6.1ubuntu2_s390x.deb ...
533s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ...
533s Selecting previously unselected package libsharpyuv0:s390x.
533s Preparing to unpack .../062-libsharpyuv0_1.5.0-0.1_s390x.deb ...
533s Unpacking libsharpyuv0:s390x (1.5.0-0.1) ...
533s Selecting previously unselected package libwebp7:s390x.
533s Preparing to unpack .../063-libwebp7_1.5.0-0.1_s390x.deb ...
533s Unpacking libwebp7:s390x (1.5.0-0.1) ...
533s Selecting previously unselected package libtiff6:s390x.
533s Preparing to unpack .../064-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ...
533s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ...
533s Selecting previously unselected package libgdk-pixbuf-2.0-0:s390x.
533s Preparing to unpack .../065-libgdk-pixbuf-2.0-0_2.42.12+dfsg-2_s390x.deb ...
533s Unpacking libgdk-pixbuf-2.0-0:s390x (2.42.12+dfsg-2) ...
533s Selecting previously unselected package libgraphite2-3:s390x.
533s Preparing to unpack .../066-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ...
533s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
533s Selecting previously unselected package libharfbuzz0b:s390x.
533s Preparing to unpack .../067-libharfbuzz0b_10.2.0-1_s390x.deb ...
533s Unpacking libharfbuzz0b:s390x (10.2.0-1) ...
533s Selecting previously unselected package x11-common.
533s Preparing to unpack .../068-x11-common_1%3a7.7+23ubuntu3_all.deb ...
533s Unpacking x11-common (1:7.7+23ubuntu3) ...
533s Selecting previously unselected package libice6:s390x.
533s Preparing to unpack .../069-libice6_2%3a1.1.1-1_s390x.deb ...
533s Unpacking libice6:s390x (2:1.1.1-1) ...
533s Selecting previously unselected package libicu-dev:s390x.
533s Preparing to unpack .../070-libicu-dev_76.1-1ubuntu2_s390x.deb ...
533s Unpacking libicu-dev:s390x (76.1-1ubuntu2) ...
533s Selecting previously unselected package libjpeg-turbo8-dev:s390x.
533s Preparing to unpack .../071-libjpeg-turbo8-dev_2.1.5-3ubuntu2_s390x.deb ...
533s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ...
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537s Selecting previously unselected package r-cran-pkgkitten.
537s Preparing to unpack .../173-r-cran-pkgkitten_0.2.4-1_all.deb ...
537s Unpacking r-cran-pkgkitten (0.2.4-1) ...
537s Selecting previously unselected package r-cran-rcpp.
537s Preparing to unpack .../174-r-cran-rcpp_1.0.14-1_s390x.deb ...
537s Unpacking r-cran-rcpp (1.0.14-1) ...
537s Selecting previously unselected package r-cran-later.
537s Preparing to unpack .../175-r-cran-later_1.4.1+dfsg-1_s390x.deb ...
537s Unpacking r-cran-later (1.4.1+dfsg-1) ...
537s Selecting previously unselected package r-cran-magrittr.
537s Preparing to unpack .../176-r-cran-magrittr_2.0.3-1_s390x.deb ...
537s Unpacking r-cran-magrittr (2.0.3-1) ...
537s Selecting previously unselected package r-cran-promises.
537s Preparing to unpack .../177-r-cran-promises_1.3.2+dfsg-1_s390x.deb ...
537s Unpacking r-cran-promises (1.3.2+dfsg-1) ...
537s Selecting previously unselected package r-cran-httpuv.
537s Preparing to unpack .../178-r-cran-httpuv_1.6.15+dfsg-1_s390x.deb ...
537s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ...
537s Selecting previously unselected package r-cran-xtable.
537s Preparing to unpack .../179-r-cran-xtable_1%3a1.8-4-2_all.deb ...
537s Unpacking r-cran-xtable (1:1.8-4-2) ...
537s Selecting previously unselected package r-cran-sourcetools.
537s Preparing to unpack .../180-r-cran-sourcetools_0.1.7-1-1_s390x.deb ...
537s Unpacking r-cran-sourcetools (0.1.7-1-1) ...
537s Selecting previously unselected package r-cran-crayon.
537s Preparing to unpack .../181-r-cran-crayon_1.5.3-1_all.deb ...
537s Unpacking r-cran-crayon (1.5.3-1) ...
537s Selecting previously unselected package r-cran-withr.
537s Preparing to unpack .../182-r-cran-withr_3.0.2+dfsg-1_all.deb ...
537s Unpacking r-cran-withr (3.0.2+dfsg-1) ...
537s Selecting previously unselected package r-cran-commonmark.
537s Preparing to unpack .../183-r-cran-commonmark_1.9.2-2_s390x.deb ...
537s Unpacking r-cran-commonmark (1.9.2-2) ...
537s Selecting previously unselected package libjs-twitter-bootstrap-datepicker.
537s Preparing to unpack .../184-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ...
537s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ...
537s Selecting previously unselected package r-cran-shiny.
537s Preparing to unpack .../185-r-cran-shiny_1.10.0+dfsg-2_all.deb ...
537s Unpacking r-cran-shiny (1.10.0+dfsg-2) ...
537s Selecting previously unselected package r-cran-rmarkdown.
537s Preparing to unpack .../186-r-cran-rmarkdown_2.29+dfsg-1_all.deb ...
537s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ...
537s Selecting previously unselected package r-cran-bookdown.
537s Preparing to unpack .../187-r-cran-bookdown_0.42+dfsg-1_all.deb ...
537s Unpacking r-cran-bookdown (0.42+dfsg-1) ...
537s Selecting previously unselected package r-cran-biocmanager.
537s Preparing to unpack .../188-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ...
537s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ...
537s Selecting previously unselected package tex-common.
537s Preparing to unpack .../189-tex-common_6.19_all.deb ...
537s Unpacking tex-common (6.19) ...
537s Selecting previously unselected package t1utils.
537s Preparing to unpack .../190-t1utils_1.41-4build3_s390x.deb ...
537s Unpacking t1utils (1.41-4build3) ...
537s Selecting previously unselected package texlive-binaries.
537s Preparing to unpack .../191-texlive-binaries_2024.20240313.70630+ds-5build2_s390x.deb ...
537s Unpacking texlive-binaries (2024.20240313.70630+ds-5build2) ...
537s Selecting previously unselected package texlive-base.
537s Preparing to unpack .../192-texlive-base_2024.20250114-1_all.deb ...
537s Unpacking texlive-base (2024.20250114-1) ...
538s Selecting previously unselected package texlive-latex-base.
538s Preparing to unpack .../193-texlive-latex-base_2024.20250114-1_all.deb ...
538s Unpacking texlive-latex-base (2024.20250114-1) ...
538s Selecting previously unselected package texlive-bibtex-extra.
538s Preparing to unpack .../194-texlive-bibtex-extra_2024.20250114-1_all.deb ...
538s Unpacking texlive-bibtex-extra (2024.20250114-1) ...
541s Selecting previously unselected package r-bioc-biocversion.
541s Preparing to unpack .../195-r-bioc-biocversion_3.20.0-2_all.deb ...
541s Unpacking r-bioc-biocversion (3.20.0-2) ...
541s Selecting previously unselected package r-bioc-biocstyle.
541s Preparing to unpack .../196-r-bioc-biocstyle_2.34.0+dfsg-1_all.deb ...
541s Unpacking r-bioc-biocstyle (2.34.0+dfsg-1) ...
541s Selecting previously unselected package r-cran-rjson.
541s Preparing to unpack .../197-r-cran-rjson_0.2.23-1_s390x.deb ...
541s Unpacking r-cran-rjson (0.2.23-1) ...
541s Selecting previously unselected package r-cran-bitops.
541s Preparing to unpack .../198-r-cran-bitops_1.0-9-1_s390x.deb ...
541s Unpacking r-cran-bitops (1.0-9-1) ...
541s Selecting previously unselected package r-cran-rcurl.
541s Preparing to unpack .../199-r-cran-rcurl_1.98-1.16+dfsg-1_s390x.deb ...
541s Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ...
541s Selecting previously unselected package r-cran-dbi.
541s Preparing to unpack .../200-r-cran-dbi_1.2.3-1_all.deb ...
541s Unpacking r-cran-dbi (1.2.3-1) ...
541s Selecting previously unselected package r-cran-gtable.
541s Preparing to unpack .../201-r-cran-gtable_0.3.6+dfsg-1_all.deb ...
541s Unpacking r-cran-gtable (0.3.6+dfsg-1) ...
541s Selecting previously unselected package r-cran-isoband.
541s Preparing to unpack .../202-r-cran-isoband_0.2.7-1_s390x.deb ...
541s Unpacking r-cran-isoband (0.2.7-1) ...
541s Selecting previously unselected package r-cran-mass.
541s Preparing to unpack .../203-r-cran-mass_7.3-64-1_s390x.deb ...
541s Unpacking r-cran-mass (7.3-64-1) ...
541s Selecting previously unselected package r-cran-lattice.
541s Preparing to unpack .../204-r-cran-lattice_0.22-6-1_s390x.deb ...
541s Unpacking r-cran-lattice (0.22-6-1) ...
541s Selecting previously unselected package r-cran-nlme.
541s Preparing to unpack .../205-r-cran-nlme_3.1.167-1_s390x.deb ...
541s Unpacking r-cran-nlme (3.1.167-1) ...
541s Selecting previously unselected package r-cran-matrix.
541s Preparing to unpack .../206-r-cran-matrix_1.7-3-1_s390x.deb ...
541s Unpacking r-cran-matrix (1.7-3-1) ...
541s Selecting previously unselected package r-cran-mgcv.
541s Preparing to unpack .../207-r-cran-mgcv_1.9-1-1_s390x.deb ...
541s Unpacking r-cran-mgcv (1.9-1-1) ...
541s Selecting previously unselected package r-cran-farver.
541s Preparing to unpack .../208-r-cran-farver_2.1.2-1_s390x.deb ...
541s Unpacking r-cran-farver (2.1.2-1) ...
542s Selecting previously unselected package r-cran-labeling.
542s Preparing to unpack .../209-r-cran-labeling_0.4.3-1_all.deb ...
542s Unpacking r-cran-labeling (0.4.3-1) ...
542s Selecting previously unselected package r-cran-colorspace.
542s Preparing to unpack .../210-r-cran-colorspace_2.1-1+dfsg-1_s390x.deb ...
542s Unpacking r-cran-colorspace (2.1-1+dfsg-1) ...
542s Selecting previously unselected package r-cran-munsell.
542s Preparing to unpack .../211-r-cran-munsell_0.5.1-1_all.deb ...
542s Unpacking r-cran-munsell (0.5.1-1) ...
542s Selecting previously unselected package r-cran-rcolorbrewer.
542s Preparing to unpack .../212-r-cran-rcolorbrewer_1.1-3-1build1_all.deb ...
542s Unpacking r-cran-rcolorbrewer (1.1-3-1build1) ...
542s Selecting previously unselected package r-cran-viridislite.
542s Preparing to unpack .../213-r-cran-viridislite_0.4.2-2_all.deb ...
542s Unpacking r-cran-viridislite (0.4.2-2) ...
542s Selecting previously unselected package r-cran-scales.
542s Preparing to unpack .../214-r-cran-scales_1.3.0-1_all.deb ...
542s Unpacking r-cran-scales (1.3.0-1) ...
542s Selecting previously unselected package r-cran-fansi.
542s Preparing to unpack .../215-r-cran-fansi_1.0.5-1_s390x.deb ...
542s Unpacking r-cran-fansi (1.0.5-1) ...
542s Selecting previously unselected package r-cran-utf8.
542s Preparing to unpack .../216-r-cran-utf8_1.2.4-1_s390x.deb ...
542s Unpacking r-cran-utf8 (1.2.4-1) ...
542s Selecting previously unselected package r-cran-vctrs.
542s Preparing to unpack .../217-r-cran-vctrs_0.6.5-1_s390x.deb ...
542s Unpacking r-cran-vctrs (0.6.5-1) ...
542s Selecting previously unselected package r-cran-pillar.
542s Preparing to unpack .../218-r-cran-pillar_1.10.1+dfsg-1_all.deb ...
542s Unpacking r-cran-pillar (1.10.1+dfsg-1) ...
542s Selecting previously unselected package r-cran-pkgconfig.
542s Preparing to unpack .../219-r-cran-pkgconfig_2.0.3-2build1_all.deb ...
542s Unpacking r-cran-pkgconfig (2.0.3-2build1) ...
542s Selecting previously unselected package r-cran-tibble.
542s Preparing to unpack .../220-r-cran-tibble_3.2.1+dfsg-3_s390x.deb ...
542s Unpacking r-cran-tibble (3.2.1+dfsg-3) ...
542s Selecting previously unselected package r-cran-ggplot2.
542s Preparing to unpack .../221-r-cran-ggplot2_3.5.1+dfsg-1_all.deb ...
542s Unpacking r-cran-ggplot2 (3.5.1+dfsg-1) ...
542s Selecting previously unselected package r-cran-gridextra.
542s Preparing to unpack .../222-r-cran-gridextra_2.3-3build1_all.deb ...
542s Unpacking r-cran-gridextra (2.3-3build1) ...
542s Selecting previously unselected package r-cran-png.
542s Preparing to unpack .../223-r-cran-png_0.1-8-1build2_s390x.deb ...
542s Unpacking r-cran-png (0.1-8-1build2) ...
542s Selecting previously unselected package r-cran-htmlwidgets.
542s Preparing to unpack .../224-r-cran-htmlwidgets_1.6.4+dfsg-1_all.deb ...
542s Unpacking r-cran-htmlwidgets (1.6.4+dfsg-1) ...
542s Selecting previously unselected package r-cran-lazyeval.
542s Preparing to unpack .../225-r-cran-lazyeval_0.2.2-1build1_s390x.deb ...
542s Unpacking r-cran-lazyeval (0.2.2-1build1) ...
542s Selecting previously unselected package r-cran-crosstalk.
542s Preparing to unpack .../226-r-cran-crosstalk_1.2.1+dfsg-1_all.deb ...
542s Unpacking r-cran-crosstalk (1.2.1+dfsg-1) ...
542s Selecting previously unselected package r-cran-dt.
542s Preparing to unpack .../227-r-cran-dt_0.33+dfsg-1_all.deb ...
542s Unpacking r-cran-dt (0.33+dfsg-1) ...
542s Selecting previously unselected package r-cran-rsvg.
542s Preparing to unpack .../228-r-cran-rsvg_2.6.1-1_s390x.deb ...
542s Unpacking r-cran-rsvg (2.6.1-1) ...
542s Selecting previously unselected package r-cran-stringi.
542s Preparing to unpack .../229-r-cran-stringi_1.8.4-1build1_s390x.deb ...
542s Unpacking r-cran-stringi (1.8.4-1build1) ...
542s Selecting previously unselected package r-cran-bh.
542s Preparing to unpack .../230-r-cran-bh_1.84.0-1_all.deb ...
542s Unpacking r-cran-bh (1.84.0-1) ...
542s Selecting previously unselected package r-bioc-chemminer.
542s Preparing to unpack .../231-r-bioc-chemminer_3.58.0+dfsg-2_s390x.deb ...
542s Unpacking r-bioc-chemminer (3.58.0+dfsg-2) ...
542s Selecting previously unselected package r-cran-snow.
542s Preparing to unpack .../232-r-cran-snow_1%3a0.4.4-2_all.deb ...
542s Unpacking r-cran-snow (1:0.4.4-2) ...
542s Selecting previously unselected package r-cran-snowfall.
542s Preparing to unpack .../233-r-cran-snowfall_1.84-6.3-1_all.deb ...
542s Unpacking r-cran-snowfall (1.84-6.3-1) ...
542s Selecting previously unselected package r-cran-runit.
542s Preparing to unpack .../234-r-cran-runit_0.4.33-1_all.deb ...
542s Unpacking r-cran-runit (0.4.33-1) ...
542s Selecting previously unselected package r-cran-rcppannoy.
542s Preparing to unpack .../235-r-cran-rcppannoy_0.0.22-1_s390x.deb ...
542s Unpacking r-cran-rcppannoy (0.0.22-1) ...
542s Selecting previously unselected package r-bioc-eir.
542s Preparing to unpack .../236-r-bioc-eir_1.46.0+ds-2_s390x.deb ...
542s Unpacking r-bioc-eir (1.46.0+ds-2) ...
542s Selecting previously unselected package r-cran-bit.
542s Preparing to unpack .../237-r-cran-bit_4.6.0+dfsg-1_s390x.deb ...
542s Unpacking r-cran-bit (4.6.0+dfsg-1) ...
542s Selecting previously unselected package r-cran-bit64.
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542s Selecting previously unselected package r-cran-blob.
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542s Selecting previously unselected package r-cran-cpp11.
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542s Selecting previously unselected package r-cran-rsqlite.
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542s Unpacking r-cran-rsqlite (2.3.9-1) ...
542s Setting up libjs-json (0~20221030+~1.0.8-1) ...
542s Setting up javascript-common (12) ...
542s Setting up libgraphite2-3:s390x (1.3.14-2ubuntu1) ...
542s Setting up libpixman-1-0:s390x (0.44.0-3) ...
542s Setting up libsharpyuv0:s390x (1.5.0-0.1) ...
542s Setting up libncurses-dev:s390x (6.5+20250216-2) ...
542s Setting up fonts-mathjax (2.7.9+dfsg-1) ...
542s Setting up libxpm4:s390x (1:3.5.17-1build2) ...
542s Setting up libjs-mathjax (2.7.9+dfsg-1) ...
542s Setting up libxi6:s390x (2:1.8.2-1) ...
542s Setting up libxrender1:s390x (1:0.9.10-1.1build1) ...
542s Setting up libdatrie1:s390x (0.2.13-3build1) ...
542s Setting up libjs-popper.js (1.16.1+ds-6) ...
542s Setting up libxcb-render0:s390x (1.17.0-2) ...
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542s Setting up libjs-lunr (2.3.9~dfsg-2) ...
542s Setting up unzip (6.0-28ubuntu6) ...
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542s Setting up x11-common (1:7.7+23ubuntu3) ...
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542s Setting up libgomp1:s390x (15-20250222-0ubuntu1) ...
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542s Setting up libjbig0:s390x (2.1-6.1ubuntu2) ...
542s Setting up libpcre2-16-0:s390x (10.45-1) ...
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543s Setting up libblas3:s390x (3.12.1-2) ...
543s update-alternatives: using /usr/lib/s390x-linux-gnu/blas/libblas.so.3 to provide /usr/lib/s390x-linux-gnu/libblas.so.3 (libblas.so.3-s390x-linux-gnu) in auto mode
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543s Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
543s Setting up libisl23:s390x (0.27-1) ...
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543s Setting up dctrl-tools (2.24-3build3) ...
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543s Setting up libitm1:s390x (15-20250222-0ubuntu1) ...
543s Setting up libsynctex2:s390x (2024.20240313.70630+ds-5build2) ...
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543s Setting up libjs-jquery-datatables-extensions (0.0+git20150910.28fd64e+dfsg-5) ...
543s Setting up libpotrace0:s390x (1.16-2build1) ...
543s Setting up libjpeg8:s390x (8c-2ubuntu11) ...
543s Setting up libice6:s390x (2:1.1.1-1) ...
543s Setting up libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ...
543s Setting up liblapack3:s390x (3.12.1-2) ...
543s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/s390x-linux-gnu/liblapack.so.3 (liblapack.so.3-s390x-linux-gnu) in auto mode
543s Setting up libpcre2-dev:s390x (10.45-1) ...
543s Setting up fontconfig-config (2.15.0-2ubuntu1) ...
543s Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ...
543s Setting up libpng-dev:s390x (1.6.47-1) ...
543s Setting up libpaper-utils (2.2.5-0.3) ...
543s Setting up libbibtex-parser-perl (1.05+dfsg-1) ...
543s Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ...
543s Setting up pkgconf:s390x (1.8.1-4) ...
543s Setting up libthai0:s390x (0.1.29-2build1) ...
543s Setting up libjs-jquery-ui (1.13.2+dfsg-1) ...
543s Setting up libptexenc1:s390x (2024.20240313.70630+ds-5build2) ...
543s Setting up pandoc (3.1.11.1+ds-2) ...
543s Setting up liblapack-dev:s390x (3.12.1-2) ...
543s update-alternatives: using /usr/lib/s390x-linux-gnu/lapack/liblapack.so to provide /usr/lib/s390x-linux-gnu/liblapack.so (liblapack.so-s390x-linux-gnu) in auto mode
543s Setting up cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
543s Setting up cpp-14 (14.2.0-17ubuntu3) ...
543s Setting up libtiff6:s390x (4.5.1+git230720-4ubuntu4) ...
543s Setting up libgdk-pixbuf-2.0-0:s390x (2.42.12+dfsg-2) ...
543s Setting up libfontconfig1:s390x (2.15.0-2ubuntu1) ...
543s Setting up libgcc-14-dev:s390x (14.2.0-17ubuntu3) ...
543s Setting up libjpeg8-dev:s390x (8c-2ubuntu11) ...
543s Setting up libstdc++-14-dev:s390x (14.2.0-17ubuntu3) ...
543s Setting up libsm6:s390x (2:1.2.4-1) ...
543s Setting up libgfortran-14-dev:s390x (14.2.0-17ubuntu3) ...
543s Setting up fontconfig (2.15.0-2ubuntu1) ...
545s Regenerating fonts cache... done.
545s Setting up libxft2:s390x (2.3.6-1build1) ...
545s Setting up libboost1.83-dev:s390x (1.83.0-4.1ubuntu2) ...
545s Setting up cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
545s Setting up libtk8.6:s390x (8.6.16-1) ...
545s Setting up libpango-1.0-0:s390x (1.56.2-1) ...
545s Setting up libjpeg-dev:s390x (8c-2ubuntu11) ...
545s Setting up libcairo2:s390x (1.18.2-2) ...
545s Setting up gcc-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
545s Setting up gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
545s Setting up libxt6t64:s390x (1:1.2.1-1.2build1) ...
545s Setting up g++-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
545s Setting up cpp (4:14.2.0-1ubuntu1) ...
545s Setting up libcairo-gobject2:s390x (1.18.2-2) ...
545s Setting up libboost-dev:s390x (1.83.0.2ubuntu1) ...
545s Setting up libpangoft2-1.0-0:s390x (1.56.2-1) ...
545s Setting up libpangocairo-1.0-0:s390x (1.56.2-1) ...
545s Setting up libxmu6:s390x (2:1.1.3-3build2) ...
545s Setting up gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu3) ...
545s Setting up g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
545s Setting up libxaw7:s390x (2:1.0.16-1) ...
545s Setting up gcc-14 (14.2.0-17ubuntu3) ...
545s Setting up librsvg2-2:s390x (2.59.90+dfsg-2) ...
545s Setting up r-base-core (4.4.3-1) ...
545s Creating config file /etc/R/Renviron with new version
545s Setting up r-cran-crayon (1.5.3-1) ...
545s Setting up r-cran-labeling (0.4.3-1) ...
545s Setting up r-cran-sourcetools (0.1.7-1-1) ...
545s Setting up r-cran-rsvg (2.6.1-1) ...
545s Setting up r-cran-lattice (0.22-6-1) ...
545s Setting up r-cran-nlme (3.1.167-1) ...
545s Setting up r-cran-farver (2.1.2-1) ...
545s Setting up r-cran-viridislite (0.4.2-2) ...
545s Setting up texlive-binaries (2024.20240313.70630+ds-5build2) ...
545s update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
545s update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
545s Setting up r-cran-lazyeval (0.2.2-1build1) ...
545s Setting up r-cran-commonmark (1.9.2-2) ...
545s Setting up g++-14 (14.2.0-17ubuntu3) ...
545s Setting up r-cran-rjson (0.2.23-1) ...
545s Setting up r-cran-r6 (2.6.1-1) ...
545s Setting up r-cran-pkgkitten (0.2.4-1) ...
545s Setting up gfortran-14 (14.2.0-17ubuntu3) ...
545s Setting up texlive-base (2024.20250114-1) ...
545s tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
546s tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
546s tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
546s tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex
546s Setting up r-cran-magrittr (2.0.3-1) ...
546s Setting up r-cran-rappdirs (0.3.3-1) ...
546s Setting up r-cran-littler (0.3.20-2) ...
546s Setting up r-cran-bh (1.84.0-1) ...
546s Setting up r-cran-fs (1.6.5+dfsg-1) ...
546s Setting up r-cran-rcpp (1.0.14-1) ...
546s Setting up r-bioc-biocgenerics (0.52.0-2) ...
546s Setting up r-cran-rlang (1.1.5-1) ...
546s Setting up littler (0.3.20-2) ...
546s Setting up gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ...
546s Setting up r-cran-xfun (0.51+dfsg-1) ...
546s Setting up r-cran-plogr (0.2.0-3build1) ...
546s Setting up r-cran-withr (3.0.2+dfsg-1) ...
546s Setting up r-cran-mime (0.12-2) ...
546s Setting up r-cran-base64enc (0.1-3-3) ...
546s Setting up r-cran-digest (0.6.37-1) ...
546s Setting up r-cran-yaml (2.3.10-1) ...
546s Setting up r-cran-evaluate (1.0.3-1) ...
546s Setting up r-cran-dbi (1.2.3-1) ...
546s Setting up r-cran-highr (0.11+dfsg-1) ...
546s Setting up r-cran-fansi (1.0.5-1) ...
546s Setting up r-cran-mass (7.3-64-1) ...
546s Setting up r-cran-snow (1:0.4.4-2) ...
546s Setting up r-cran-glue (1.8.0-1) ...
546s Setting up r-cran-bit (4.6.0+dfsg-1) ...
546s Setting up r-cran-xtable (1:1.8-4-2) ...
546s Setting up r-cran-cli (3.6.4-1) ...
546s Setting up r-cran-lifecycle (1.0.4+dfsg-1) ...
546s Setting up r-cran-bitops (1.0-9-1) ...
546s Setting up r-bioc-biocversion (3.20.0-2) ...
546s Setting up r-cran-bit64 (4.6.0-1-1ubuntu2) ...
546s Setting up r-cran-biocmanager (1.30.25+dfsg-1) ...
546s Setting up gcc (4:14.2.0-1ubuntu1) ...
546s Setting up r-cran-fastmap (1.2.0-1) ...
546s Setting up r-cran-png (0.1-8-1build2) ...
546s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ...
546s Setting up r-cran-pkgconfig (2.0.3-2build1) ...
546s Setting up r-cran-utf8 (1.2.4-1) ...
546s Setting up r-cran-colorspace (2.1-1+dfsg-1) ...
546s Setting up r-cran-snowfall (1.84-6.3-1) ...
546s Setting up r-cran-stringi (1.8.4-1build1) ...
546s Setting up texlive-latex-base (2024.20250114-1) ...
546s Setting up r-cran-cpp11 (0.5.2-1) ...
546s Setting up r-cran-rcolorbrewer (1.1-3-1build1) ...
546s Setting up r-cran-isoband (0.2.7-1) ...
546s Setting up r-cran-runit (0.4.33-1) ...
546s Setting up r-cran-gtable (0.3.6+dfsg-1) ...
546s Setting up r-cran-later (1.4.1+dfsg-1) ...
546s Setting up r-cran-matrix (1.7-3-1) ...
546s Setting up r-cran-htmltools (0.5.8.1-1) ...
546s Setting up r-cran-tinytex (0.56-1) ...
546s Setting up r-cran-knitr (1.49+dfsg-1) ...
546s Setting up r-cran-mgcv (1.9-1-1) ...
546s Setting up g++ (4:14.2.0-1ubuntu1) ...
546s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
546s Setting up r-cran-cachem (1.1.0-1) ...
546s Setting up r-cran-sass (0.4.9+dfsg-1) ...
546s Setting up build-essential (12.10ubuntu1) ...
546s Setting up r-cran-rcurl (1.98-1.16+dfsg-1) ...
546s Setting up r-cran-vctrs (0.6.5-1) ...
546s Setting up r-cran-pillar (1.10.1+dfsg-1) ...
546s Setting up r-cran-rcppannoy (0.0.22-1) ...
546s Setting up r-cran-munsell (0.5.1-1) ...
546s Setting up r-cran-tibble (3.2.1+dfsg-3) ...
546s Setting up r-cran-fontawesome (0.5.3-1) ...
546s Setting up gfortran (4:14.2.0-1ubuntu1) ...
546s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
546s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist
546s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
546s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist
546s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ...
546s Setting up texlive-bibtex-extra (2024.20250114-1) ...
546s Setting up r-cran-gridextra (2.3-3build1) ...
546s Setting up r-cran-scales (1.3.0-1) ...
546s Setting up r-cran-memoise (2.0.1-1) ...
546s Setting up r-cran-promises (1.3.2+dfsg-1) ...
546s Setting up r-cran-blob (1.2.4-1) ...
546s Setting up r-cran-rsqlite (2.3.9-1) ...
546s Setting up r-base-dev (4.4.3-1) ...
546s Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ...
546s Setting up r-cran-httpuv (1.6.15+dfsg-1) ...
546s Setting up r-cran-bslib (0.8.0+dfsg-1) ...
546s Setting up pkg-r-autopkgtest (20231212ubuntu1) ...
546s Setting up r-cran-shiny (1.10.0+dfsg-2) ...
546s Setting up r-cran-rmarkdown (2.29+dfsg-1) ...
546s Setting up r-cran-bookdown (0.42+dfsg-1) ...
546s Setting up r-cran-crosstalk (1.2.1+dfsg-1) ...
546s Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ...
546s Setting up r-bioc-biocstyle (2.34.0+dfsg-1) ...
546s Setting up r-cran-dt (0.33+dfsg-1) ...
546s Setting up r-bioc-chemminer (3.58.0+dfsg-2) ...
546s Setting up r-bioc-eir (1.46.0+ds-2) ...
546s Processing triggers for install-info (7.1.1-1) ...
546s Processing triggers for libc-bin (2.41-1ubuntu2) ...
546s Processing triggers for man-db (2.13.0-1) ...
547s Processing triggers for tex-common (6.19) ...
548s Running updmap-sys. This may take some time... done.
548s Running mktexlsr /var/lib/texmf ... done.
548s Building format(s) --all.
587s 	This may take some time... done.
588s autopkgtest [17:52:55]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest
588s autopkgtest [17:52:55]: test pkg-r-autopkgtest: [-----------------------
588s Test: Try to load the R library eiR
588s 
588s R version 4.4.3 (2025-02-28) -- "Trophy Case"
588s Copyright (C) 2025 The R Foundation for Statistical Computing
588s Platform: s390x-ibm-linux-gnu
588s 
588s R is free software and comes with ABSOLUTELY NO WARRANTY.
588s You are welcome to redistribute it under certain conditions.
588s Type 'license()' or 'licence()' for distribution details.
588s 
588s R is a collaborative project with many contributors.
588s Type 'contributors()' for more information and
588s 'citation()' on how to cite R or R packages in publications.
588s 
588s Type 'demo()' for some demos, 'help()' for on-line help, or
588s 'help.start()' for an HTML browser interface to help.
588s Type 'q()' to quit R.
588s 
588s > library('eiR')
588s Loading required package: ChemmineR
589s Loading required package: DBI
589s code for methods in class “Rcpp_AnnoyAngular” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
589s code for methods in class “Rcpp_AnnoyAngular” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
589s code for methods in class “Rcpp_AnnoyEuclidean” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
589s code for methods in class “Rcpp_AnnoyEuclidean” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
589s code for methods in class “Rcpp_AnnoyManhattan” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
589s code for methods in class “Rcpp_AnnoyManhattan” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
589s code for methods in class “Rcpp_AnnoyHamming” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
589s code for methods in class “Rcpp_AnnoyHamming” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?)
589s > 
589s > 
589s Other tests are currently unsupported!
589s They will be progressively added.
589s autopkgtest [17:52:56]: test pkg-r-autopkgtest: -----------------------]
590s pkg-r-autopkgtest    PASS
590s autopkgtest [17:52:57]: test pkg-r-autopkgtest:  - - - - - - - - - - results - - - - - - - - - -
590s autopkgtest [17:52:57]: @@@@@@@@@@@@@@@@@@@@ summary
590s pkg-r-autopkgtest    PASS
595s nova [W] Using flock in prodstack6-s390x
595s Creating nova instance adt-plucky-s390x-r-bioc-eir-20250315-174307-juju-7f2275-prod-proposed-migration-environment-2-25e11405-30f2-48e8-a726-bbca48527036 from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)...
595s nova [W] Timed out waiting for ef81f01b-6024-46ce-926e-b738bf605a0e to get deleted.