0s autopkgtest [17:42:14]: starting date and time: 2025-03-15 17:42:14+0000 0s autopkgtest [17:42:14]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [17:42:14]: host juju-7f2275-prod-proposed-migration-environment-15; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.dx35x9k3/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-bioc-destiny --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-15@bos03-s390x-24.secgroup --name adt-plucky-s390x-r-bioc-destiny-20250315-174213-juju-7f2275-prod-proposed-migration-environment-15-0958a198-c743-4903-977b-f1f63f35b439 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-15 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 176s autopkgtest [17:45:10]: testbed dpkg architecture: s390x 176s autopkgtest [17:45:10]: testbed apt version: 2.9.33 176s autopkgtest [17:45:10]: @@@@@@@@@@@@@@@@@@@@ test bed setup 177s autopkgtest [17:45:11]: testbed release detected to be: None 178s autopkgtest [17:45:12]: updating testbed package index (apt update) 178s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 178s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 178s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 178s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 178s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 178s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 179s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 179s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [113 kB] 179s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1824 B] 179s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B] 179s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [320 kB] 179s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [13.4 kB] 179s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3776 B] 179s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [240 B] 179s Fetched 1073 kB in 1s (724 kB/s) 180s Reading package lists... 181s + lsb_release --codename --short 181s + RELEASE=plucky 181s + cat 181s + [ plucky != trusty ] 181s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y --allow-downgrades -o Dpkg::Options::=--force-confnew dist-upgrade 181s Reading package lists... 181s Building dependency tree... 181s Reading state information... 181s Calculating upgrade... 181s Calculating upgrade... 181s The following packages were automatically installed and are no longer required: 181s libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 181s linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic 181s linux-modules-6.11.0-8-generic linux-tools-6.11.0-8 181s linux-tools-6.11.0-8-generic 181s Use 'sudo apt autoremove' to remove them. 181s The following packages will be upgraded: 181s pinentry-curses python3-jinja2 strace 181s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 181s Need to get 652 kB of archives. 181s After this operation, 27.6 kB of additional disk space will be used. 181s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB] 182s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x pinentry-curses s390x 1.3.1-2ubuntu3 [42.9 kB] 182s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 182s Fetched 652 kB in 1s (806 kB/s) 182s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81428 files and directories currently installed.) 182s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ... 182s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 182s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_s390x.deb ... 182s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 182s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 182s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 182s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 182s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 183s Setting up strace (6.13+ds-1ubuntu1) ... 183s Processing triggers for man-db (2.13.0-1) ... 183s + rm /etc/apt/preferences.d/force-downgrade-to-release.pref 183s + /usr/lib/apt/apt-helper analyze-pattern ?true 183s + uname+ -r 183s sed s/\./\\./g 183s + running_kernel_pattern=^linux-.*6\.14\.0-10-generic.* 183s + apt list ?obsolete 183s + tail -n+2 183s + cut -d/ -f1 183s + grep -v ^linux-.*6\.14\.0-10-generic.* 183s + obsolete_pkgs=linux-headers-6.11.0-8-generic 183s linux-headers-6.11.0-8 183s linux-modules-6.11.0-8-generic 183s linux-tools-6.11.0-8-generic 183s linux-tools-6.11.0-8 183s + DEBIAN_FRONTEND=noninteractive eatmydata apt-get -y purge --autoremove linux-headers-6.11.0-8-generic linux-headers-6.11.0-8 linux-modules-6.11.0-8-generic linux-tools-6.11.0-8-generic linux-tools-6.11.0-8 183s Reading package lists... 184s Building dependency tree... 184s Reading state information... 184s Solving dependencies... 184s The following packages will be REMOVED: 184s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 184s linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 184s linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8* 184s linux-tools-6.11.0-8-generic* 184s 0 upgraded, 0 newly installed, 9 to remove and 5 not upgraded. 184s After this operation, 167 MB disk space will be freed. 184s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81428 files and directories currently installed.) 184s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 184s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 184s Removing libpython3.12t64:s390x (3.12.9-1) ... 184s Removing libpython3.12-stdlib:s390x (3.12.9-1) ... 184s Removing libnsl2:s390x (1.3.0-3build3) ... 184s Removing libpython3.12-minimal:s390x (3.12.9-1) ... 184s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 184s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 185s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 185s Processing triggers for libc-bin (2.41-1ubuntu1) ... 185s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56328 files and directories currently installed.) 185s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ... 185s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 186s + grep -q trusty /etc/lsb-release 186s + [ ! -d /usr/share/doc/unattended-upgrades ] 186s + [ ! -d /usr/share/doc/lxd ] 186s + [ ! -d /usr/share/doc/lxd-client ] 186s + [ ! -d /usr/share/doc/snapd ] 186s + type iptables 186s + cat 186s + chmod 755 /etc/rc.local 186s + . /etc/rc.local 186s + iptables -w -t mangle -A FORWARD -p tcp --tcp-flags SYN,RST SYN -j TCPMSS --clamp-mss-to-pmtu 186s + iptables -A OUTPUT -d 10.255.255.1/32 -p tcp -j DROP 186s + iptables -A OUTPUT -d 10.255.255.2/32 -p tcp -j DROP 186s + uname -m 186s + [ s390x = ppc64le ] 186s + [ -d /run/systemd/system ] 186s + systemd-detect-virt --quiet --vm 186s + mkdir -p /etc/systemd/system/systemd-random-seed.service.d/ 186s + cat 186s + grep -q lz4 /etc/initramfs-tools/initramfs.conf 186s + echo COMPRESS=lz4 186s autopkgtest [17:45:20]: upgrading testbed (apt dist-upgrade and autopurge) 186s Reading package lists... 186s Building dependency tree... 186s Reading state information... 186s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 186s Starting 2 pkgProblemResolver with broken count: 0 186s Done 186s Entering ResolveByKeep 186s 186s Calculating upgrade... 187s The following packages will be upgraded: 187s libc-bin libc-dev-bin libc6 libc6-dev locales 187s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 187s Need to get 9512 kB of archives. 187s After this operation, 8192 B of additional disk space will be used. 187s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6-dev s390x 2.41-1ubuntu2 [1678 kB] 188s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-dev-bin s390x 2.41-1ubuntu2 [24.3 kB] 188s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6 s390x 2.41-1ubuntu2 [2892 kB] 190s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-bin s390x 2.41-1ubuntu2 [671 kB] 190s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x locales all 2.41-1ubuntu2 [4246 kB] 193s Preconfiguring packages ... 193s Fetched 9512 kB in 6s (1495 kB/s) 193s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 193s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_s390x.deb ... 193s Unpacking libc6-dev:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 193s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_s390x.deb ... 193s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 193s Preparing to unpack .../libc6_2.41-1ubuntu2_s390x.deb ... 193s Unpacking libc6:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 194s Setting up libc6:s390x (2.41-1ubuntu2) ... 194s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 194s Preparing to unpack .../libc-bin_2.41-1ubuntu2_s390x.deb ... 194s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 194s Setting up libc-bin (2.41-1ubuntu2) ... 194s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 194s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 194s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 194s Setting up locales (2.41-1ubuntu2) ... 194s Generating locales (this might take a while)... 195s en_US.UTF-8... done 195s Generation complete. 195s Setting up libc-dev-bin (2.41-1ubuntu2) ... 195s Setting up libc6-dev:s390x (2.41-1ubuntu2) ... 195s Processing triggers for man-db (2.13.0-1) ... 196s Processing triggers for systemd (257.3-1ubuntu3) ... 197s Reading package lists... 197s Building dependency tree... 197s Reading state information... 197s Starting pkgProblemResolver with broken count: 0 197s Starting 2 pkgProblemResolver with broken count: 0 197s Done 197s Solving dependencies... 197s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 198s autopkgtest [17:45:32]: rebooting testbed after setup commands that affected boot 220s autopkgtest [17:45:54]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP Wed Mar 12 14:53:49 UTC 2025 223s autopkgtest [17:45:57]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-destiny 226s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-destiny 3.20.0-3 (dsc) [2499 B] 226s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-destiny 3.20.0-3 (tar) [892 kB] 226s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-destiny 3.20.0-3 (diff) [3044 B] 226s gpgv: Signature made Tue Jan 21 15:11:38 2025 UTC 226s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 226s gpgv: issuer "crusoe@debian.org" 226s gpgv: Can't check signature: No public key 226s dpkg-source: warning: cannot verify inline signature for ./r-bioc-destiny_3.20.0-3.dsc: no acceptable signature found 226s autopkgtest [17:46:00]: testing package r-bioc-destiny version 3.20.0-3 227s autopkgtest [17:46:01]: build not needed 235s autopkgtest [17:46:09]: test pkg-r-autopkgtest: preparing testbed 235s Reading package lists... 235s Building dependency tree... 235s Reading state information... 235s Starting pkgProblemResolver with broken count: 1 235s Starting 2 pkgProblemResolver with broken count: 1 235s Investigating (0) r-bioc-scrnaseq:s390x < none -> 2.20.0+ds-2 @un puN Ib > 235s Broken r-bioc-scrnaseq:s390x Depends on r-bioc-experimenthub:s390x < none | 2.14.0+ds-2 @un uH > (>= 2.3.4) 235s Considering r-bioc-experimenthub:s390x 0 as a solution to r-bioc-scrnaseq:s390x 0 235s Re-Instated r-cran-plogr:s390x 235s Re-Instated r-cran-rsqlite:s390x 235s Re-Instated r-cran-filelock:s390x 235s Re-Instated r-bioc-biocfilecache:s390x 235s Re-Instated r-cran-biocmanager:s390x 235s Re-Instated r-bioc-biocversion:s390x 235s Re-Instated r-cran-png:s390x 235s Re-Instated r-bioc-biostrings:s390x 235s Re-Instated r-bioc-keggrest:s390x 235s Re-Instated r-bioc-annotationdbi:s390x 235s Re-Instated r-bioc-annotationhub:s390x 235s Re-Instated r-bioc-experimenthub:s390x 235s Broken r-bioc-scrnaseq:s390x Depends on r-bioc-ensembldb:s390x < none | 2.30.0+dfsg-3 @un uH > 235s Considering r-bioc-ensembldb:s390x 1 as a solution to r-bioc-scrnaseq:s390x 0 235s Re-Instated r-cran-xml:s390x 235s Re-Instated r-cran-bitops:s390x 235s Re-Instated r-bioc-rhtslib:s390x 235s Re-Instated r-bioc-rsamtools:s390x 235s Re-Instated r-bioc-genomicalignments:s390x 235s Re-Instated r-bioc-biocio:s390x 235s Re-Instated r-cran-rcurl:s390x 235s Re-Instated r-cran-rjson:s390x 235s Re-Instated r-cran-restfulr:s390x 235s Re-Instated r-bioc-rtracklayer:s390x 235s Re-Instated r-bioc-genomicfeatures:s390x 235s Re-Instated r-bioc-annotationfilter:s390x 235s Re-Instated r-bioc-protgenerics:s390x 235s Re-Instated r-bioc-ensembldb:s390x 235s Broken r-bioc-scrnaseq:s390x Depends on r-bioc-alabaster.base:s390x < none @un H > 235s Broken r-bioc-scrnaseq:s390x Depends on r-bioc-alabaster.matrix:s390x < none @un H > 235s Broken r-bioc-scrnaseq:s390x Depends on r-bioc-alabaster.sce:s390x < none | 1.6.0+ds-2 @un uH > 235s Considering r-bioc-alabaster.sce:s390x 1 as a solution to r-bioc-scrnaseq:s390x 0 235s Reinst Failed early because of r-bioc-alabaster.base:s390x 235s Broken r-bioc-scrnaseq:s390x Depends on r-bioc-gypsum:s390x < none | 1.2.0+ds-2 @un uH > 235s Considering r-bioc-gypsum:s390x 1 as a solution to r-bioc-scrnaseq:s390x 0 235s Re-Instated r-cran-httr2:s390x 235s Re-Instated r-bioc-gypsum:s390x 235s Done 235s Some packages could not be installed. This may mean that you have 235s requested an impossible situation or if you are using the unstable 235s distribution that some required packages have not yet been created 235s or been moved out of Incoming. 235s The following information may help to resolve the situation: 235s 235s The following packages have unmet dependencies: 235s r-bioc-scrnaseq : Depends: r-bioc-alabaster.base but it is not installable 235s Depends: r-bioc-alabaster.matrix but it is not installable 235s Depends: r-bioc-alabaster.sce but it is not going to be installed 235s E: Unable to correct problems, you have held broken packages. 235s autopkgtest: WARNING: Test dependencies are unsatisfiable with using apt pinning. Retrying with using all packages from plucky-proposed 236s Reading package lists... 236s Building dependency tree... 236s Reading state information... 236s Starting pkgProblemResolver with broken count: 1 236s Starting 2 pkgProblemResolver with broken count: 1 236s Investigating (0) r-bioc-scrnaseq:s390x < none -> 2.20.0+ds-2 @un puN Ib > 236s Broken r-bioc-scrnaseq:s390x Depends on r-bioc-experimenthub:s390x < none | 2.14.0+ds-2 @un uH > (>= 2.3.4) 236s Considering r-bioc-experimenthub:s390x 0 as a solution to r-bioc-scrnaseq:s390x 0 236s Re-Instated r-cran-plogr:s390x 236s Re-Instated r-cran-rsqlite:s390x 236s Re-Instated r-cran-filelock:s390x 236s Re-Instated r-bioc-biocfilecache:s390x 236s Re-Instated r-cran-biocmanager:s390x 236s Re-Instated r-bioc-biocversion:s390x 236s Re-Instated r-cran-png:s390x 236s Re-Instated r-bioc-biostrings:s390x 236s Re-Instated r-bioc-keggrest:s390x 236s Re-Instated r-bioc-annotationdbi:s390x 236s Re-Instated r-bioc-annotationhub:s390x 236s Re-Instated r-bioc-experimenthub:s390x 236s Broken r-bioc-scrnaseq:s390x Depends on r-bioc-ensembldb:s390x < none | 2.30.0+dfsg-3 @un uH > 236s Considering r-bioc-ensembldb:s390x 1 as a solution to r-bioc-scrnaseq:s390x 0 236s Re-Instated r-cran-xml:s390x 236s Re-Instated r-cran-bitops:s390x 236s Re-Instated r-bioc-rhtslib:s390x 236s Re-Instated r-bioc-rsamtools:s390x 236s Re-Instated r-bioc-genomicalignments:s390x 236s Re-Instated r-bioc-biocio:s390x 236s Re-Instated r-cran-rcurl:s390x 236s Re-Instated r-cran-rjson:s390x 236s Re-Instated r-cran-restfulr:s390x 236s Re-Instated r-bioc-rtracklayer:s390x 236s Re-Instated r-bioc-genomicfeatures:s390x 236s Re-Instated r-bioc-annotationfilter:s390x 236s Re-Instated r-bioc-protgenerics:s390x 236s Re-Instated r-bioc-ensembldb:s390x 236s Broken r-bioc-scrnaseq:s390x Depends on r-bioc-alabaster.base:s390x < none @un H > 236s Broken r-bioc-scrnaseq:s390x Depends on r-bioc-alabaster.matrix:s390x < none @un H > 236s Broken r-bioc-scrnaseq:s390x Depends on r-bioc-alabaster.sce:s390x < none | 1.6.0+ds-2 @un uH > 236s Considering r-bioc-alabaster.sce:s390x 1 as a solution to r-bioc-scrnaseq:s390x 0 236s Reinst Failed early because of r-bioc-alabaster.base:s390x 236s Broken r-bioc-scrnaseq:s390x Depends on r-bioc-gypsum:s390x < none | 1.2.0+ds-2 @un uH > 236s Considering r-bioc-gypsum:s390x 1 as a solution to r-bioc-scrnaseq:s390x 0 236s Re-Instated r-cran-httr2:s390x 236s Re-Instated r-bioc-gypsum:s390x 236s Done 236s Some packages could not be installed. This may mean that you have 236s requested an impossible situation or if you are using the unstable 236s distribution that some required packages have not yet been created 236s or been moved out of Incoming. 236s The following information may help to resolve the situation: 236s 236s The following packages have unmet dependencies: 236s r-bioc-scrnaseq : Depends: r-bioc-alabaster.base but it is not installable 236s Depends: r-bioc-alabaster.matrix but it is not installable 236s Depends: r-bioc-alabaster.sce but it is not going to be installed 236s E: Unable to correct problems, you have held broken packages. 236s autopkgtest [17:46:10]: @@@@@@@@@@@@@@@@@@@@ summary 236s pkg-r-autopkgtest SKIP installation fails and skip-not-installable set 236s pkg-r-autopkgtest SKIP installation fails and skip-not-installable set 242s nova [W] Using flock in prodstack6-s390x 242s Creating nova instance adt-plucky-s390x-r-bioc-destiny-20250315-174213-juju-7f2275-prod-proposed-migration-environment-15-0958a198-c743-4903-977b-f1f63f35b439 from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)... 242s nova [W] Timed out waiting for a628c76c-be30-4ed5-9777-3c22eb014fe5 to get deleted.