0s autopkgtest [17:41:17]: starting date and time: 2025-03-15 17:41:17+0000 0s autopkgtest [17:41:17]: git checkout: 325255d2 Merge branch 'pin-any-arch' into 'ubuntu/production' 0s autopkgtest [17:41:17]: host juju-7f2275-prod-proposed-migration-environment-2; command line: /home/ubuntu/autopkgtest/runner/autopkgtest --output-dir /tmp/autopkgtest-work.vjh1no7l/out --timeout-copy=6000 --setup-commands /home/ubuntu/autopkgtest-cloud/worker-config-production/setup-canonical.sh --apt-pocket=proposed=src:glibc --apt-upgrade r-bioc-biostrings --timeout-short=300 --timeout-copy=20000 --timeout-build=20000 --env=ADT_TEST_TRIGGERS=glibc/2.41-1ubuntu2 -- ssh -s /home/ubuntu/autopkgtest/ssh-setup/nova -- --flavor autopkgtest-s390x --security-groups autopkgtest-juju-7f2275-prod-proposed-migration-environment-2@bos03-s390x-1.secgroup --name adt-plucky-s390x-r-bioc-biostrings-20250315-174117-juju-7f2275-prod-proposed-migration-environment-2-c02227f6-83cc-4357-bfb1-ab63f41dadd2 --image adt/ubuntu-plucky-s390x-server --keyname testbed-juju-7f2275-prod-proposed-migration-environment-2 --net-id=net_prod-proposed-migration-s390x -e TERM=linux -e ''"'"'http_proxy=http://squid.internal:3128'"'"'' -e ''"'"'https_proxy=http://squid.internal:3128'"'"'' -e ''"'"'no_proxy=127.0.0.1,127.0.1.1,login.ubuntu.com,localhost,localdomain,novalocal,internal,archive.ubuntu.com,ports.ubuntu.com,security.ubuntu.com,ddebs.ubuntu.com,changelogs.ubuntu.com,keyserver.ubuntu.com,launchpadlibrarian.net,launchpadcontent.net,launchpad.net,10.24.0.0/24,keystone.ps5.canonical.com,objectstorage.prodstack5.canonical.com,radosgw.ps5.canonical.com'"'"'' --mirror=http://ftpmaster.internal/ubuntu/ 102s autopkgtest [17:42:59]: testbed dpkg architecture: s390x 102s autopkgtest [17:42:59]: testbed apt version: 2.9.33 102s autopkgtest [17:42:59]: @@@@@@@@@@@@@@@@@@@@ test bed setup 102s autopkgtest [17:42:59]: testbed release detected to be: None 103s autopkgtest [17:43:00]: updating testbed package index (apt update) 104s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed InRelease [126 kB] 104s Hit:2 http://ftpmaster.internal/ubuntu plucky InRelease 104s Hit:3 http://ftpmaster.internal/ubuntu plucky-updates InRelease 104s Hit:4 http://ftpmaster.internal/ubuntu plucky-security InRelease 104s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main Sources [99.7 kB] 104s Get:6 http://ftpmaster.internal/ubuntu plucky-proposed/universe Sources [379 kB] 105s Get:7 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse Sources [15.8 kB] 105s Get:8 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x Packages [113 kB] 105s Get:9 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x c-n-f Metadata [1824 B] 105s Get:10 http://ftpmaster.internal/ubuntu plucky-proposed/restricted s390x c-n-f Metadata [116 B] 105s Get:11 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x Packages [320 kB] 105s Get:12 http://ftpmaster.internal/ubuntu plucky-proposed/universe s390x c-n-f Metadata [13.4 kB] 105s Get:13 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x Packages [3776 B] 105s Get:14 http://ftpmaster.internal/ubuntu plucky-proposed/multiverse s390x c-n-f Metadata [240 B] 105s Fetched 1073 kB in 2s (678 kB/s) 106s Reading package lists... 106s Reading package lists... 106s Building dependency tree... 106s Reading state information... 107s Calculating upgrade... 107s Calculating upgrade... 107s The following packages were automatically installed and are no longer required: 107s libnsl2 libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 107s linux-headers-6.11.0-8 linux-headers-6.11.0-8-generic 107s linux-modules-6.11.0-8-generic linux-tools-6.11.0-8 107s linux-tools-6.11.0-8-generic 107s Use 'sudo apt autoremove' to remove them. 107s The following packages will be upgraded: 107s pinentry-curses python3-jinja2 strace 107s 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 107s Need to get 652 kB of archives. 107s After this operation, 27.6 kB of additional disk space will be used. 107s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x strace s390x 6.13+ds-1ubuntu1 [500 kB] 108s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x pinentry-curses s390x 1.3.1-2ubuntu3 [42.9 kB] 108s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x python3-jinja2 all 3.1.5-2ubuntu1 [109 kB] 108s Fetched 652 kB in 1s (638 kB/s) 108s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81428 files and directories currently installed.) 108s Preparing to unpack .../strace_6.13+ds-1ubuntu1_s390x.deb ... 108s Unpacking strace (6.13+ds-1ubuntu1) over (6.11-0ubuntu1) ... 108s Preparing to unpack .../pinentry-curses_1.3.1-2ubuntu3_s390x.deb ... 108s Unpacking pinentry-curses (1.3.1-2ubuntu3) over (1.3.1-2ubuntu2) ... 108s Preparing to unpack .../python3-jinja2_3.1.5-2ubuntu1_all.deb ... 108s Unpacking python3-jinja2 (3.1.5-2ubuntu1) over (3.1.5-2) ... 108s Setting up pinentry-curses (1.3.1-2ubuntu3) ... 108s Setting up python3-jinja2 (3.1.5-2ubuntu1) ... 109s Setting up strace (6.13+ds-1ubuntu1) ... 109s Processing triggers for man-db (2.13.0-1) ... 109s Reading package lists... 109s Building dependency tree... 109s Reading state information... 109s Solving dependencies... 110s The following packages will be REMOVED: 110s libnsl2* libpython3.12-minimal* libpython3.12-stdlib* libpython3.12t64* 110s linux-headers-6.11.0-8* linux-headers-6.11.0-8-generic* 110s linux-modules-6.11.0-8-generic* linux-tools-6.11.0-8* 110s linux-tools-6.11.0-8-generic* 110s 0 upgraded, 0 newly installed, 9 to remove and 5 not upgraded. 110s After this operation, 167 MB disk space will be freed. 110s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 81428 files and directories currently installed.) 110s Removing linux-tools-6.11.0-8-generic (6.11.0-8.8) ... 110s Removing linux-tools-6.11.0-8 (6.11.0-8.8) ... 110s Removing libpython3.12t64:s390x (3.12.9-1) ... 110s Removing libpython3.12-stdlib:s390x (3.12.9-1) ... 110s Removing libnsl2:s390x (1.3.0-3build3) ... 110s Removing libpython3.12-minimal:s390x (3.12.9-1) ... 110s Removing linux-headers-6.11.0-8-generic (6.11.0-8.8) ... 110s Removing linux-headers-6.11.0-8 (6.11.0-8.8) ... 111s Removing linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 111s Processing triggers for libc-bin (2.41-1ubuntu1) ... 111s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56328 files and directories currently installed.) 111s Purging configuration files for libpython3.12-minimal:s390x (3.12.9-1) ... 111s Purging configuration files for linux-modules-6.11.0-8-generic (6.11.0-8.8) ... 111s autopkgtest [17:43:08]: upgrading testbed (apt dist-upgrade and autopurge) 111s Reading package lists... 112s Building dependency tree... 112s Reading state information... 112s Calculating upgrade...Starting pkgProblemResolver with broken count: 0 112s Starting 2 pkgProblemResolver with broken count: 0 112s Done 112s Entering ResolveByKeep 112s 112s Calculating upgrade... 112s The following packages will be upgraded: 112s libc-bin libc-dev-bin libc6 libc6-dev locales 113s 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 113s Need to get 9512 kB of archives. 113s After this operation, 8192 B of additional disk space will be used. 113s Get:1 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6-dev s390x 2.41-1ubuntu2 [1678 kB] 114s Get:2 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-dev-bin s390x 2.41-1ubuntu2 [24.3 kB] 114s Get:3 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc6 s390x 2.41-1ubuntu2 [2892 kB] 116s Get:4 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x libc-bin s390x 2.41-1ubuntu2 [671 kB] 116s Get:5 http://ftpmaster.internal/ubuntu plucky-proposed/main s390x locales all 2.41-1ubuntu2 [4246 kB] 119s Preconfiguring packages ... 119s Fetched 9512 kB in 7s (1458 kB/s) 119s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 119s Preparing to unpack .../libc6-dev_2.41-1ubuntu2_s390x.deb ... 119s Unpacking libc6-dev:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 119s Preparing to unpack .../libc-dev-bin_2.41-1ubuntu2_s390x.deb ... 119s Unpacking libc-dev-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 119s Preparing to unpack .../libc6_2.41-1ubuntu2_s390x.deb ... 119s Unpacking libc6:s390x (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 119s Setting up libc6:s390x (2.41-1ubuntu2) ... 120s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 120s Preparing to unpack .../libc-bin_2.41-1ubuntu2_s390x.deb ... 120s Unpacking libc-bin (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 120s Setting up libc-bin (2.41-1ubuntu2) ... 120s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 120s Preparing to unpack .../locales_2.41-1ubuntu2_all.deb ... 120s Unpacking locales (2.41-1ubuntu2) over (2.41-1ubuntu1) ... 120s Setting up locales (2.41-1ubuntu2) ... 120s Generating locales (this might take a while)... 121s en_US.UTF-8... done 121s Generation complete. 121s Setting up libc-dev-bin (2.41-1ubuntu2) ... 121s Setting up libc6-dev:s390x (2.41-1ubuntu2) ... 121s Processing triggers for man-db (2.13.0-1) ... 122s Processing triggers for systemd (257.3-1ubuntu3) ... 123s Reading package lists... 123s Building dependency tree... 123s Reading state information... 123s Starting pkgProblemResolver with broken count: 0 123s Starting 2 pkgProblemResolver with broken count: 0 123s Done 123s Solving dependencies... 124s 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 124s autopkgtest [17:43:21]: rebooting testbed after setup commands that affected boot 137s autopkgtest-virt-ssh: WARNING: ssh connection failed. Retrying in 3 seconds... 145s autopkgtest [17:43:42]: testbed running kernel: Linux 6.14.0-10-generic #10-Ubuntu SMP Wed Mar 12 14:53:49 UTC 2025 148s autopkgtest [17:43:45]: @@@@@@@@@@@@@@@@@@@@ apt-source r-bioc-biostrings 158s Get:1 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-biostrings 2.74.1+dfsg-2 (dsc) [2327 B] 158s Get:2 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-biostrings 2.74.1+dfsg-2 (tar) [12.1 MB] 158s Get:3 http://ftpmaster.internal/ubuntu plucky/universe r-bioc-biostrings 2.74.1+dfsg-2 (diff) [5544 B] 158s gpgv: Signature made Sun Jan 12 14:09:29 2025 UTC 158s gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 158s gpgv: issuer "crusoe@debian.org" 158s gpgv: Can't check signature: No public key 158s dpkg-source: warning: cannot verify inline signature for ./r-bioc-biostrings_2.74.1+dfsg-2.dsc: no acceptable signature found 159s autopkgtest [17:43:56]: testing package r-bioc-biostrings version 2.74.1+dfsg-2 159s autopkgtest [17:43:56]: build not needed 161s autopkgtest [17:43:58]: test pkg-r-autopkgtest: preparing testbed 162s Reading package lists... 162s Building dependency tree... 162s Reading state information... 162s Starting pkgProblemResolver with broken count: 0 162s Starting 2 pkgProblemResolver with broken count: 0 162s Done 162s The following NEW packages will be installed: 162s build-essential cpp cpp-14 cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu 162s dctrl-tools fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono 162s fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax 162s g++ g++-14 g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc gcc-14 162s gcc-14-s390x-linux-gnu gcc-s390x-linux-gnu gfortran gfortran-14 162s gfortran-14-s390x-linux-gnu gfortran-s390x-linux-gnu icu-devtools 162s javascript-common libasan8 libbibtex-parser-perl libblas-dev libblas3 162s libboost-dev libboost1.83-dev libbz2-dev libcairo2 libcc1-0 libdatrie1 162s libdeflate-dev libdeflate0 libfontconfig1 libfreetype6 libgcc-14-dev 162s libgfortran-14-dev libgfortran5 libgomp1 libgraphite2-3 libharfbuzz0b 162s libice6 libicu-dev libio-string-perl libisl23 libitm1 libjbig0 libjpeg-dev 162s libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjs-bootstrap 162s libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery 162s libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json 162s libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr 162s libjs-popper.js libjs-prettify libjs-sifter.js 162s libjs-twitter-bootstrap-datepicker libkpathsea6 liblapack-dev liblapack3 162s liblatex-tounicode-perl liblua5.4-0 liblzma-dev libmpc3 libmpfi0 162s libncurses-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 162s libpaper-utils libpaper2 libpcre2-16-0 libpcre2-32-0 libpcre2-dev 162s libpcre2-posix3 libpixman-1-0 libpkgconf3 libpng-dev libpotrace0 libptexenc1 162s libreadline-dev libsharpyuv0 libsm6 libstdc++-14-dev libsynctex2 libtcl8.6 162s libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtirpc-dev 162s libtk8.6 libubsan1 libwebp7 libxaw7 libxcb-render0 libxcb-shm0 libxft2 162s libxi6 libxmu6 libxpm4 libxrender1 libxss1 libxt6t64 libzzip-0-13t64 littler 162s node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data 162s pkg-r-autopkgtest pkgconf pkgconf-bin r-base-core r-base-dev r-bioc-affy 162s r-bioc-affyio r-bioc-annotationdbi r-bioc-biobase r-bioc-biocgenerics 162s r-bioc-biocio r-bioc-biocparallel r-bioc-biocstyle r-bioc-biocversion 162s r-bioc-biostrings r-bioc-bsgenome r-bioc-delayedarray r-bioc-genomeinfodb 162s r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures 162s r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics 162s r-bioc-preprocesscore r-bioc-pwalign r-bioc-rhtslib r-bioc-rsamtools 162s r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray 162s r-bioc-summarizedexperiment r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc 162s r-cran-abind r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager 162s r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown 162s r-cran-brio r-cran-bslib r-cran-cachem r-cran-callr r-cran-cli 162s r-cran-codetools r-cran-commonmark r-cran-covr r-cran-cpp11 r-cran-crayon 162s r-cran-curl r-cran-dbi r-cran-desc r-cran-diffobj r-cran-digest 162s r-cran-evaluate r-cran-fastmap r-cran-fontawesome r-cran-formatr r-cran-fs 162s r-cran-futile.logger r-cran-futile.options r-cran-glue r-cran-highr 162s r-cran-htmltools r-cran-httpuv r-cran-httr r-cran-jquerylib r-cran-jsonlite 162s r-cran-knitr r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lazyeval 162s r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-matrix 162s r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-openssl r-cran-pkgbuild 162s r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-png 162s r-cran-praise r-cran-processx r-cran-promises r-cran-ps r-cran-r6 162s r-cran-rappdirs r-cran-rcpp r-cran-rcurl r-cran-restfulr r-cran-rex 162s r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rprojroot r-cran-rsqlite 162s r-cran-runit r-cran-sass r-cran-shiny r-cran-snow r-cran-sourcetools 162s r-cran-sys r-cran-testthat r-cran-tinytex r-cran-vctrs r-cran-waldo 162s r-cran-withr r-cran-xfun r-cran-xml r-cran-xtable r-cran-yaml t1utils 162s tex-common texlive-base texlive-bibtex-extra texlive-binaries 162s texlive-latex-base unzip x11-common xdg-utils zip zlib1g-dev 163s 0 upgraded, 268 newly installed, 0 to remove and 0 not upgraded. 163s Need to get 438 MB of archives. 163s After this operation, 1428 MB of additional disk space will be used. 163s Get:1 http://ftpmaster.internal/ubuntu plucky/main s390x libisl23 s390x 0.27-1 [704 kB] 163s Get:2 http://ftpmaster.internal/ubuntu plucky/main s390x libmpc3 s390x 1.3.1-1build2 [57.8 kB] 163s Get:3 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [9572 kB] 169s Get:4 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-14 s390x 14.2.0-17ubuntu3 [1028 B] 169s Get:5 http://ftpmaster.internal/ubuntu plucky/main s390x cpp-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [5556 B] 169s Get:6 http://ftpmaster.internal/ubuntu plucky/main s390x cpp s390x 4:14.2.0-1ubuntu1 [22.4 kB] 169s Get:7 http://ftpmaster.internal/ubuntu plucky/main s390x libcc1-0 s390x 15-20250222-0ubuntu1 [49.2 kB] 169s Get:8 http://ftpmaster.internal/ubuntu plucky/main s390x libgomp1 s390x 15-20250222-0ubuntu1 [152 kB] 169s Get:9 http://ftpmaster.internal/ubuntu plucky/main s390x libitm1 s390x 15-20250222-0ubuntu1 [31.2 kB] 169s Get:10 http://ftpmaster.internal/ubuntu plucky/main s390x libasan8 s390x 15-20250222-0ubuntu1 [2970 kB] 171s Get:11 http://ftpmaster.internal/ubuntu plucky/main s390x libubsan1 s390x 15-20250222-0ubuntu1 [1212 kB] 172s Get:12 http://ftpmaster.internal/ubuntu plucky/main s390x libgcc-14-dev s390x 14.2.0-17ubuntu3 [1037 kB] 172s Get:13 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [18.7 MB] 177s Get:14 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-14 s390x 14.2.0-17ubuntu3 [526 kB] 177s Get:15 http://ftpmaster.internal/ubuntu plucky/main s390x gcc-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1204 B] 177s Get:16 http://ftpmaster.internal/ubuntu plucky/main s390x gcc s390x 4:14.2.0-1ubuntu1 [5004 B] 177s Get:17 http://ftpmaster.internal/ubuntu plucky/main s390x libstdc++-14-dev s390x 14.2.0-17ubuntu3 [2611 kB] 178s Get:18 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [11.0 MB] 179s Get:19 http://ftpmaster.internal/ubuntu plucky/main s390x g++-14 s390x 14.2.0-17ubuntu3 [21.8 kB] 179s Get:20 http://ftpmaster.internal/ubuntu plucky/main s390x g++-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [956 B] 179s Get:21 http://ftpmaster.internal/ubuntu plucky/main s390x g++ s390x 4:14.2.0-1ubuntu1 [1080 B] 179s Get:22 http://ftpmaster.internal/ubuntu plucky/main s390x build-essential s390x 12.10ubuntu1 [4930 B] 179s Get:23 http://ftpmaster.internal/ubuntu plucky/main s390x dctrl-tools s390x 2.24-3build3 [106 kB] 179s Get:24 http://ftpmaster.internal/ubuntu plucky/main s390x libfreetype6 s390x 2.13.3+dfsg-1 [431 kB] 179s Get:25 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-mono all 2.37-8 [502 kB] 179s Get:26 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-dejavu-core all 2.37-8 [835 kB] 179s Get:27 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig-config s390x 2.15.0-2ubuntu1 [37.5 kB] 179s Get:28 http://ftpmaster.internal/ubuntu plucky/main s390x libfontconfig1 s390x 2.15.0-2ubuntu1 [150 kB] 179s Get:29 http://ftpmaster.internal/ubuntu plucky/main s390x fontconfig s390x 2.15.0-2ubuntu1 [191 kB] 179s Get:30 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB] 179s Get:31 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [118 kB] 179s Get:32 http://ftpmaster.internal/ubuntu plucky/universe s390x fonts-lmodern all 2.005-1 [4799 kB] 179s Get:33 http://ftpmaster.internal/ubuntu plucky/main s390x fonts-mathjax all 2.7.9+dfsg-1 [2208 kB] 179s Get:34 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran5 s390x 15-20250222-0ubuntu1 [620 kB] 179s Get:35 http://ftpmaster.internal/ubuntu plucky/main s390x libgfortran-14-dev s390x 14.2.0-17ubuntu3 [654 kB] 179s Get:36 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14-s390x-linux-gnu s390x 14.2.0-17ubuntu3 [10.3 MB] 180s Get:37 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-14 s390x 14.2.0-17ubuntu3 [13.6 kB] 180s Get:38 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran-s390x-linux-gnu s390x 4:14.2.0-1ubuntu1 [1012 B] 180s Get:39 http://ftpmaster.internal/ubuntu plucky/main s390x gfortran s390x 4:14.2.0-1ubuntu1 [1160 B] 180s Get:40 http://ftpmaster.internal/ubuntu plucky/main s390x icu-devtools s390x 76.1-1ubuntu2 [225 kB] 180s Get:41 http://ftpmaster.internal/ubuntu plucky/main s390x javascript-common all 12 [5216 B] 180s Get:42 http://ftpmaster.internal/ubuntu plucky/main s390x libio-string-perl all 1.08-4 [11.1 kB] 180s Get:43 http://ftpmaster.internal/ubuntu plucky/universe s390x liblatex-tounicode-perl all 0.55-1 [28.8 kB] 180s Get:44 http://ftpmaster.internal/ubuntu plucky/universe s390x libbibtex-parser-perl all 1.05+dfsg-1 [16.5 kB] 180s Get:45 http://ftpmaster.internal/ubuntu plucky/main s390x libblas3 s390x 3.12.1-2 [252 kB] 180s Get:46 http://ftpmaster.internal/ubuntu plucky/main s390x libblas-dev s390x 3.12.1-2 [254 kB] 180s Get:47 http://ftpmaster.internal/ubuntu plucky/main s390x libboost1.83-dev s390x 1.83.0-4.1ubuntu2 [10.7 MB] 180s Get:48 http://ftpmaster.internal/ubuntu plucky/main s390x libboost-dev s390x 1.83.0.2ubuntu1 [4470 B] 180s Get:49 http://ftpmaster.internal/ubuntu plucky/main s390x libbz2-dev s390x 1.0.8-6 [39.1 kB] 180s Get:50 http://ftpmaster.internal/ubuntu plucky/main s390x libpixman-1-0 s390x 0.44.0-3 [201 kB] 180s Get:51 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-render0 s390x 1.17.0-2 [17.0 kB] 180s Get:52 http://ftpmaster.internal/ubuntu plucky/main s390x libxcb-shm0 s390x 1.17.0-2 [5862 B] 180s Get:53 http://ftpmaster.internal/ubuntu plucky/main s390x libxrender1 s390x 1:0.9.10-1.1build1 [20.4 kB] 180s Get:54 http://ftpmaster.internal/ubuntu plucky/main s390x libcairo2 s390x 1.18.2-2 [580 kB] 180s Get:55 http://ftpmaster.internal/ubuntu plucky/main s390x libdatrie1 s390x 0.2.13-3build1 [20.6 kB] 180s Get:56 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate0 s390x 1.23-1 [46.1 kB] 180s Get:57 http://ftpmaster.internal/ubuntu plucky/main s390x libdeflate-dev s390x 1.23-1 [52.2 kB] 180s Get:58 http://ftpmaster.internal/ubuntu plucky/main s390x libgraphite2-3 s390x 1.3.14-2ubuntu1 [79.8 kB] 180s Get:59 http://ftpmaster.internal/ubuntu plucky/main s390x libharfbuzz0b s390x 10.2.0-1 [538 kB] 181s Get:60 http://ftpmaster.internal/ubuntu plucky/main s390x x11-common all 1:7.7+23ubuntu3 [21.7 kB] 181s Get:61 http://ftpmaster.internal/ubuntu plucky/main s390x libice6 s390x 2:1.1.1-1 [45.4 kB] 181s Get:62 http://ftpmaster.internal/ubuntu plucky/main s390x libicu-dev s390x 76.1-1ubuntu2 [12.2 MB] 181s Get:63 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8 s390x 2.1.5-3ubuntu2 [147 kB] 181s Get:64 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-turbo8-dev s390x 2.1.5-3ubuntu2 [281 kB] 181s Get:65 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8 s390x 8c-2ubuntu11 [2146 B] 181s Get:66 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg8-dev s390x 8c-2ubuntu11 [1484 B] 181s Get:67 http://ftpmaster.internal/ubuntu plucky/main s390x libjpeg-dev s390x 8c-2ubuntu11 [1484 B] 181s Get:68 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-bootstrap all 3.4.1+dfsg-3 [129 kB] 181s Get:69 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-popper.js all 1.16.1+ds-6 [54.1 kB] 181s Get:70 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-bootstrap4 all 4.6.1+dfsg1-4 [537 kB] 181s Get:71 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-d3 all 3.5.17-4 [132 kB] 181s Get:72 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-es5-shim all 4.6.7-2 [39.8 kB] 181s Get:73 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-highlight.js all 9.18.5+dfsg1-2 [385 kB] 181s Get:74 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] 181s Get:75 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-datatables all 1.11.5+dfsg-2 [146 kB] 181s Get:76 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-sifter.js all 0.6.0+dfsg-3 [12.6 kB] 181s Get:77 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-microplugin.js all 0.0.3+dfsg-1.1 [3712 B] 181s Get:78 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [51.0 kB] 181s Get:79 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-jquery-ui all 1.13.2+dfsg-1 [252 kB] 181s Get:80 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-json all 0~20221030+~1.0.8-1 [20.6 kB] 181s Get:81 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-lunr all 2.3.9~dfsg-2 [66.8 kB] 181s Get:82 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-prettify all 2015.12.04+dfsg-1.1 [39.3 kB] 181s Get:83 http://ftpmaster.internal/ubuntu plucky/main s390x libkpathsea6 s390x 2024.20240313.70630+ds-5build2 [66.9 kB] 181s Get:84 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack3 s390x 3.12.1-2 [2971 kB] 182s Get:85 http://ftpmaster.internal/ubuntu plucky/main s390x liblapack-dev s390x 3.12.1-2 [5967 kB] 182s Get:86 http://ftpmaster.internal/ubuntu plucky/main s390x liblua5.4-0 s390x 5.4.7-1 [174 kB] 182s Get:87 http://ftpmaster.internal/ubuntu plucky/universe s390x libmpfi0 s390x 1.5.4+ds-4 [34.1 kB] 182s Get:88 http://ftpmaster.internal/ubuntu plucky/main s390x libncurses-dev s390x 6.5+20250216-2 [407 kB] 182s Get:89 http://ftpmaster.internal/ubuntu plucky/main s390x libthai-data all 0.1.29-2build1 [158 kB] 182s Get:90 http://ftpmaster.internal/ubuntu plucky/main s390x libthai0 s390x 0.1.29-2build1 [20.7 kB] 182s Get:91 http://ftpmaster.internal/ubuntu plucky/main s390x libpango-1.0-0 s390x 1.56.2-1 [253 kB] 182s Get:92 http://ftpmaster.internal/ubuntu plucky/main s390x libpangoft2-1.0-0 s390x 1.56.2-1 [50.2 kB] 182s Get:93 http://ftpmaster.internal/ubuntu plucky/main s390x libpangocairo-1.0-0 s390x 1.56.2-1 [28.2 kB] 182s Get:94 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper2 s390x 2.2.5-0.3 [17.2 kB] 182s Get:95 http://ftpmaster.internal/ubuntu plucky/main s390x libpaper-utils s390x 2.2.5-0.3 [15.3 kB] 182s Get:96 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-16-0 s390x 10.45-1 [259 kB] 182s Get:97 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-32-0 s390x 10.45-1 [245 kB] 182s Get:98 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-posix3 s390x 10.45-1 [7080 B] 182s Get:99 http://ftpmaster.internal/ubuntu plucky/main s390x libpcre2-dev s390x 10.45-1 [899 kB] 182s Get:100 http://ftpmaster.internal/ubuntu plucky/main s390x libpkgconf3 s390x 1.8.1-4 [31.2 kB] 182s Get:101 http://ftpmaster.internal/ubuntu plucky/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1ubuntu1 [898 kB] 182s Get:102 http://ftpmaster.internal/ubuntu plucky/main s390x libpng-dev s390x 1.6.47-1 [278 kB] 183s Get:103 http://ftpmaster.internal/ubuntu plucky/universe s390x libpotrace0 s390x 1.16-2build1 [18.7 kB] 183s Get:104 http://ftpmaster.internal/ubuntu plucky/main s390x libptexenc1 s390x 2024.20240313.70630+ds-5build2 [43.4 kB] 183s Get:105 http://ftpmaster.internal/ubuntu plucky/main s390x libreadline-dev s390x 8.2-6 [187 kB] 183s Get:106 http://ftpmaster.internal/ubuntu plucky/main s390x libsharpyuv0 s390x 1.5.0-0.1 [16.7 kB] 183s Get:107 http://ftpmaster.internal/ubuntu plucky/main s390x libsm6 s390x 2:1.2.4-1 [18.4 kB] 183s Get:108 http://ftpmaster.internal/ubuntu plucky/main s390x libsynctex2 s390x 2024.20240313.70630+ds-5build2 [64.6 kB] 183s Get:109 http://ftpmaster.internal/ubuntu plucky/main s390x libtcl8.6 s390x 8.6.16+dfsg-1 [1034 kB] 183s Get:110 http://ftpmaster.internal/ubuntu plucky/universe s390x libteckit0 s390x 2.5.12+ds1-1 [433 kB] 183s Get:111 http://ftpmaster.internal/ubuntu plucky/main s390x libtexlua53-5 s390x 2024.20240313.70630+ds-5build2 [131 kB] 183s Get:112 http://ftpmaster.internal/ubuntu plucky/main s390x libjbig0 s390x 2.1-6.1ubuntu2 [33.1 kB] 183s Get:113 http://ftpmaster.internal/ubuntu plucky/main s390x libwebp7 s390x 1.5.0-0.1 [210 kB] 183s Get:114 http://ftpmaster.internal/ubuntu plucky/main s390x libtiff6 s390x 4.5.1+git230720-4ubuntu4 [217 kB] 183s Get:115 http://ftpmaster.internal/ubuntu plucky/main s390x libxft2 s390x 2.3.6-1build1 [49.6 kB] 183s Get:116 http://ftpmaster.internal/ubuntu plucky/main s390x libxss1 s390x 1:1.2.3-1build3 [7396 B] 183s Get:117 http://ftpmaster.internal/ubuntu plucky/main s390x libtk8.6 s390x 8.6.16-1 [830 kB] 183s Get:118 http://ftpmaster.internal/ubuntu plucky/main s390x libxt6t64 s390x 1:1.2.1-1.2build1 [184 kB] 183s Get:119 http://ftpmaster.internal/ubuntu plucky/main s390x libxmu6 s390x 2:1.1.3-3build2 [53.0 kB] 183s Get:120 http://ftpmaster.internal/ubuntu plucky/main s390x libxpm4 s390x 1:3.5.17-1build2 [41.2 kB] 183s Get:121 http://ftpmaster.internal/ubuntu plucky/main s390x libxaw7 s390x 2:1.0.16-1 [201 kB] 183s Get:122 http://ftpmaster.internal/ubuntu plucky/main s390x libxi6 s390x 2:1.8.2-1 [35.4 kB] 183s Get:123 http://ftpmaster.internal/ubuntu plucky/universe s390x libzzip-0-13t64 s390x 0.13.78+dfsg.1-0.1 [29.8 kB] 183s Get:124 http://ftpmaster.internal/ubuntu plucky/main s390x zip s390x 3.0-14ubuntu2 [187 kB] 183s Get:125 http://ftpmaster.internal/ubuntu plucky/main s390x unzip s390x 6.0-28ubuntu6 [186 kB] 183s Get:126 http://ftpmaster.internal/ubuntu plucky/main s390x xdg-utils all 1.2.1-2ubuntu1 [66.0 kB] 183s Get:127 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-core s390x 4.4.3-1 [28.6 MB] 186s Get:128 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-littler s390x 0.3.20-2 [95.0 kB] 186s Get:129 http://ftpmaster.internal/ubuntu plucky/universe s390x littler all 0.3.20-2 [2554 B] 186s Get:130 http://ftpmaster.internal/ubuntu plucky/universe s390x node-bootstrap-sass all 3.4.3-2 [187 kB] 186s Get:131 http://ftpmaster.internal/ubuntu plucky/universe s390x node-html5shiv all 3.7.3+dfsg-5 [13.5 kB] 186s Get:132 http://ftpmaster.internal/ubuntu plucky/universe s390x node-normalize.css all 8.0.1-5 [10.8 kB] 186s Get:133 http://ftpmaster.internal/ubuntu plucky/universe s390x pandoc-data all 3.1.11.1-3build1 [78.8 kB] 186s Get:134 http://ftpmaster.internal/ubuntu plucky/universe s390x pandoc s390x 3.1.11.1+ds-2 [52.5 MB] 191s Get:135 http://ftpmaster.internal/ubuntu plucky/main s390x liblzma-dev s390x 5.6.4-1 [183 kB] 191s Get:136 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf-bin s390x 1.8.1-4 [21.5 kB] 191s Get:137 http://ftpmaster.internal/ubuntu plucky/main s390x pkgconf s390x 1.8.1-4 [16.7 kB] 191s Get:138 http://ftpmaster.internal/ubuntu plucky/main s390x libtirpc-dev s390x 1.3.4+ds-1.3 [196 kB] 191s Get:139 http://ftpmaster.internal/ubuntu plucky/universe s390x r-base-dev all 4.4.3-1 [4176 B] 191s Get:140 http://ftpmaster.internal/ubuntu plucky/universe s390x pkg-r-autopkgtest all 20231212ubuntu1 [6448 B] 191s Get:141 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocgenerics all 0.52.0-2 [624 kB] 191s Get:142 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biobase s390x 2.66.0-2 [2339 kB] 191s Get:143 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-zlibbioc all 1.52.0+dfsg-2 [10.2 kB] 191s Get:144 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-affyio s390x 1.76.0-2 [98.5 kB] 191s Get:145 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] 191s Get:146 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-preprocesscore s390x 1.68.0+ds-2 [177 kB] 191s Get:147 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-affy s390x 1.84.0-2 [2016 kB] 191s Get:148 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-s4vectors s390x 0.44.0+dfsg-2 [2063 kB] 191s Get:149 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-iranges s390x 2.40.1-2 [2301 kB] 192s Get:150 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-dbi all 1.2.3-1 [853 kB] 192s Get:151 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bit s390x 4.6.0+dfsg-1 [471 kB] 192s Get:152 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bit64 s390x 4.6.0-1-1ubuntu2 [503 kB] 192s Get:153 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rlang s390x 1.1.5-1 [1713 kB] 192s Get:154 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cli s390x 3.6.4-1 [1379 kB] 192s Get:155 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-glue s390x 1.8.0-1 [164 kB] 192s Get:156 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] 192s Get:157 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-vctrs s390x 0.6.5-1 [1448 kB] 192s Get:158 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-blob all 1.2.4-1 [49.8 kB] 192s Get:159 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fastmap s390x 1.2.0-1 [72.4 kB] 192s Get:160 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cachem s390x 1.1.0-1 [74.0 kB] 192s Get:161 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-memoise all 2.0.1-1 [53.9 kB] 192s Get:162 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgconfig all 2.0.3-2build1 [19.7 kB] 192s Get:163 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-plogr all 0.2.0-3build1 [15.1 kB] 192s Get:164 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-cpp11 all 0.5.2-1 [233 kB] 192s Get:165 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rsqlite s390x 2.3.9-1 [1331 kB] 192s Get:166 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-curl s390x 6.2.1+dfsg-1ubuntu1 [196 kB] 192s Get:167 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-jsonlite s390x 1.9.1+dfsg-1 [447 kB] 192s Get:168 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-mime s390x 0.12-2 [35.8 kB] 192s Get:169 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sys s390x 3.4.3-1 [45.2 kB] 192s Get:170 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-askpass s390x 1.2.1-1 [24.8 kB] 192s Get:171 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-openssl s390x 2.3.2+dfsg-1 [406 kB] 193s Get:172 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-r6 all 2.6.1-1 [101 kB] 193s Get:173 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-httr all 1.4.7+dfsg-1 [459 kB] 193s Get:174 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-png s390x 0.1-8-1build2 [41.5 kB] 193s Get:175 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-xvector s390x 0.46.0-2 [624 kB] 193s Get:176 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-ucsc.utils all 1.2.0+ds-2 [77.2 kB] 193s Get:177 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-genomeinfodbdata all 1.2.13-2 [12.9 MB] 194s Get:178 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-genomeinfodb all 1.42.3+dfsg-1 [3887 kB] 195s Get:179 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-crayon all 1.5.3-1 [165 kB] 195s Get:180 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biostrings s390x 2.74.1+dfsg-2 [13.3 MB] 196s Get:181 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-keggrest all 1.46.0+dfsg-2 [183 kB] 196s Get:182 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-annotationdbi all 1.68.0-2 [4857 kB] 197s Get:183 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocio all 1.16.0+dfsg-2 [209 kB] 197s Get:184 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-formatr all 1.14-2 [152 kB] 197s Get:185 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lambda.r all 1.2.4-2build1 [119 kB] 197s Get:186 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-futile.options all 1.0.1-3build1 [20.2 kB] 197s Get:187 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-futile.logger all 1.4.3-4build1 [99.3 kB] 197s Get:188 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-snow all 1:0.4.4-2 [97.6 kB] 197s Get:189 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-codetools all 0.2-20-1 [90.5 kB] 197s Get:190 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bh all 1.84.0-1 [5962 B] 197s Get:191 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocparallel s390x 1.40.0-2 [1347 kB] 197s Get:192 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-base64enc s390x 0.1-3-3 [28.0 kB] 197s Get:193 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-digest s390x 0.6.37-1 [205 kB] 197s Get:194 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-htmltools s390x 0.5.8.1-1 [372 kB] 197s Get:195 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-evaluate all 1.0.3-1 [114 kB] 197s Get:196 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-xfun s390x 0.51+dfsg-1 [574 kB] 197s Get:197 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-highr all 0.11+dfsg-1 [38.5 kB] 197s Get:198 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-yaml s390x 2.3.10-1 [113 kB] 197s Get:199 http://ftpmaster.internal/ubuntu plucky/main s390x libjs-mathjax all 2.7.9+dfsg-1 [5665 kB] 197s Get:200 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-knitr all 1.49+dfsg-1 [859 kB] 198s Get:201 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-jquerylib all 0.1.4+dfsg-4 [13.5 kB] 198s Get:202 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fs s390x 1.6.5+dfsg-1 [245 kB] 198s Get:203 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rappdirs s390x 0.3.3-1 [47.5 kB] 198s Get:204 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sass s390x 0.4.9+dfsg-1 [1019 kB] 198s Get:205 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bslib all 0.8.0+dfsg-1 [4294 kB] 199s Get:206 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-fontawesome all 0.5.3-1 [1331 kB] 199s Get:207 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-tinytex all 0.56-1 [148 kB] 199s Get:208 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-modernizr all 3.13.0-0.1 [101 kB] 199s Get:209 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgkitten all 0.2.4-1 [27.2 kB] 199s Get:210 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcpp s390x 1.0.14-1 [2003 kB] 199s Get:211 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-later s390x 1.4.1+dfsg-1 [148 kB] 199s Get:212 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-magrittr s390x 2.0.3-1 [154 kB] 199s Get:213 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-promises s390x 1.3.2+dfsg-1 [296 kB] 199s Get:214 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-httpuv s390x 1.6.15+dfsg-1 [507 kB] 199s Get:215 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-xtable all 1:1.8-4-2 [689 kB] 199s Get:216 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-sourcetools s390x 0.1.7-1-1 [47.1 kB] 199s Get:217 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-withr all 3.0.2+dfsg-1 [214 kB] 199s Get:218 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-commonmark s390x 1.9.2-2 [142 kB] 199s Get:219 http://ftpmaster.internal/ubuntu plucky/universe s390x libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [28.5 kB] 199s Get:220 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-shiny all 1.10.0+dfsg-2 [3124 kB] 199s Get:221 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rmarkdown all 2.29+dfsg-1 [1501 kB] 199s Get:222 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bookdown all 0.42+dfsg-1 [1409 kB] 200s Get:223 http://ftpmaster.internal/ubuntu plucky/universe s390x tex-common all 6.19 [29.8 kB] 200s Get:224 http://ftpmaster.internal/ubuntu plucky/main s390x t1utils s390x 1.41-4build3 [65.6 kB] 200s Get:225 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-binaries s390x 2024.20240313.70630+ds-5build2 [9171 kB] 200s Get:226 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-base all 2024.20250114-1 [22.5 MB] 202s Get:227 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-latex-base all 2024.20250114-1 [1264 kB] 203s Get:228 http://ftpmaster.internal/ubuntu plucky/universe s390x texlive-bibtex-extra all 2024.20250114-1 [79.5 MB] 211s Get:229 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocversion all 3.20.0-2 [11.1 kB] 211s Get:230 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-biocstyle all 2.34.0+dfsg-1 [451 kB] 211s Get:231 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-genomicranges s390x 1.58.0+dfsg-2 [2087 kB] 211s Get:232 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-xml s390x 3.99-0.18-1 [1744 kB] 211s Get:233 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-bitops s390x 1.0-9-1 [30.1 kB] 211s Get:234 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-rhtslib s390x 3.2.0+dfsg-2 [1458 kB] 211s Get:235 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-rsamtools s390x 2.22.0+dfsg-2 [3729 kB] 212s Get:236 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-matrixstats s390x 1.5.0-1 [539 kB] 212s Get:237 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-matrixgenerics all 1.18.1-1 [450 kB] 212s Get:238 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lattice s390x 0.22-6-1 [1340 kB] 212s Get:239 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-matrix s390x 1.7-3-1 [4449 kB] 212s Get:240 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-abind all 1.4-8-1 [66.9 kB] 212s Get:241 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-s4arrays s390x 1.6.0+dfsg-2 [700 kB] 212s Get:242 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-sparsearray s390x 1.6.2+dfsg-1 [1386 kB] 213s Get:243 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-delayedarray s390x 0.32.0+dfsg-2 [2068 kB] 213s Get:244 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-summarizedexperiment all 1.36.0+dfsg-2 [1109 kB] 213s Get:245 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-genomicalignments s390x 1.42.0-2 [2152 kB] 213s Get:246 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rcurl s390x 1.98-1.16+dfsg-1 [808 kB] 213s Get:247 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rjson s390x 0.2.23-1 [104 kB] 213s Get:248 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-restfulr s390x 0.0.15-1 [380 kB] 213s Get:249 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-rtracklayer s390x 1.66.0-2 [5235 kB] 214s Get:250 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-bsgenome all 1.74.0-2 [7001 kB] 215s Get:251 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-genomicfeatures all 1.58.0+dfsg-2 [937 kB] 215s Get:252 http://ftpmaster.internal/ubuntu plucky/universe s390x r-bioc-pwalign s390x 1.2.0-2 [750 kB] 215s Get:253 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-brio s390x 1.1.5-1 [38.6 kB] 215s Get:254 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-ps s390x 1.9.0-1 [408 kB] 215s Get:255 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-processx s390x 3.8.6-1 [364 kB] 215s Get:256 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-callr all 3.7.6-1 [458 kB] 215s Get:257 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-lazyeval s390x 0.2.2-1build1 [143 kB] 215s Get:258 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rex all 1.2.1-1 [129 kB] 215s Get:259 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-covr s390x 3.6.4+dfsg-1 [302 kB] 215s Get:260 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-desc all 1.4.3-1 [359 kB] 215s Get:261 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-diffobj s390x 0.3.5-1 [1115 kB] 215s Get:262 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgbuild all 1.4.6-1 [213 kB] 215s Get:263 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-rprojroot all 2.0.4-2 [125 kB] 215s Get:264 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-pkgload all 1.4.0-1 [247 kB] 215s Get:265 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-praise all 1.0.0-4build1 [20.3 kB] 215s Get:266 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-runit all 0.4.33-1 [377 kB] 215s Get:267 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-waldo all 0.6.1-2 [150 kB] 215s Get:268 http://ftpmaster.internal/ubuntu plucky/universe s390x r-cran-testthat s390x 3.2.3-1 [1641 kB] 216s Preconfiguring packages ... 216s Fetched 438 MB in 53s (8246 kB/s) 216s Selecting previously unselected package libisl23:s390x. 216s (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56326 files and directories currently installed.) 216s Preparing to unpack .../000-libisl23_0.27-1_s390x.deb ... 216s Unpacking libisl23:s390x (0.27-1) ... 216s Selecting previously unselected package libmpc3:s390x. 216s Preparing to unpack .../001-libmpc3_1.3.1-1build2_s390x.deb ... 216s Unpacking libmpc3:s390x (1.3.1-1build2) ... 216s Selecting previously unselected package cpp-14-s390x-linux-gnu. 216s Preparing to unpack .../002-cpp-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ... 216s Unpacking cpp-14-s390x-linux-gnu (14.2.0-17ubuntu3) ... 217s Selecting previously unselected package cpp-14. 217s Preparing to unpack .../003-cpp-14_14.2.0-17ubuntu3_s390x.deb ... 217s Unpacking cpp-14 (14.2.0-17ubuntu3) ... 217s Selecting previously unselected package cpp-s390x-linux-gnu. 217s Preparing to unpack .../004-cpp-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ... 217s Unpacking cpp-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 217s Selecting previously unselected package cpp. 217s Preparing to unpack .../005-cpp_4%3a14.2.0-1ubuntu1_s390x.deb ... 217s Unpacking cpp (4:14.2.0-1ubuntu1) ... 217s Selecting previously unselected package libcc1-0:s390x. 217s Preparing to unpack .../006-libcc1-0_15-20250222-0ubuntu1_s390x.deb ... 217s Unpacking libcc1-0:s390x (15-20250222-0ubuntu1) ... 217s Selecting previously unselected package libgomp1:s390x. 217s Preparing to unpack .../007-libgomp1_15-20250222-0ubuntu1_s390x.deb ... 217s Unpacking libgomp1:s390x (15-20250222-0ubuntu1) ... 217s Selecting previously unselected package libitm1:s390x. 217s Preparing to unpack .../008-libitm1_15-20250222-0ubuntu1_s390x.deb ... 217s Unpacking libitm1:s390x (15-20250222-0ubuntu1) ... 217s Selecting previously unselected package libasan8:s390x. 217s Preparing to unpack .../009-libasan8_15-20250222-0ubuntu1_s390x.deb ... 217s Unpacking libasan8:s390x (15-20250222-0ubuntu1) ... 217s Selecting previously unselected package libubsan1:s390x. 217s Preparing to unpack .../010-libubsan1_15-20250222-0ubuntu1_s390x.deb ... 217s Unpacking libubsan1:s390x (15-20250222-0ubuntu1) ... 217s Selecting previously unselected package libgcc-14-dev:s390x. 217s Preparing to unpack .../011-libgcc-14-dev_14.2.0-17ubuntu3_s390x.deb ... 217s Unpacking libgcc-14-dev:s390x (14.2.0-17ubuntu3) ... 217s Selecting previously unselected package gcc-14-s390x-linux-gnu. 217s Preparing to unpack .../012-gcc-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ... 217s Unpacking gcc-14-s390x-linux-gnu (14.2.0-17ubuntu3) ... 217s Selecting previously unselected package gcc-14. 217s Preparing to unpack .../013-gcc-14_14.2.0-17ubuntu3_s390x.deb ... 217s Unpacking gcc-14 (14.2.0-17ubuntu3) ... 217s Selecting previously unselected package gcc-s390x-linux-gnu. 217s Preparing to unpack .../014-gcc-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ... 217s Unpacking gcc-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 217s Selecting previously unselected package gcc. 217s Preparing to unpack .../015-gcc_4%3a14.2.0-1ubuntu1_s390x.deb ... 217s Unpacking gcc (4:14.2.0-1ubuntu1) ... 217s Selecting previously unselected package libstdc++-14-dev:s390x. 217s Preparing to unpack .../016-libstdc++-14-dev_14.2.0-17ubuntu3_s390x.deb ... 217s Unpacking libstdc++-14-dev:s390x (14.2.0-17ubuntu3) ... 217s Selecting previously unselected package g++-14-s390x-linux-gnu. 217s Preparing to unpack .../017-g++-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ... 217s Unpacking g++-14-s390x-linux-gnu (14.2.0-17ubuntu3) ... 218s Selecting previously unselected package g++-14. 218s Preparing to unpack .../018-g++-14_14.2.0-17ubuntu3_s390x.deb ... 218s Unpacking g++-14 (14.2.0-17ubuntu3) ... 218s Selecting previously unselected package g++-s390x-linux-gnu. 218s Preparing to unpack .../019-g++-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ... 218s Unpacking g++-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 218s Selecting previously unselected package g++. 218s Preparing to unpack .../020-g++_4%3a14.2.0-1ubuntu1_s390x.deb ... 218s Unpacking g++ (4:14.2.0-1ubuntu1) ... 218s Selecting previously unselected package build-essential. 218s Preparing to unpack .../021-build-essential_12.10ubuntu1_s390x.deb ... 218s Unpacking build-essential (12.10ubuntu1) ... 218s Selecting previously unselected package dctrl-tools. 218s Preparing to unpack .../022-dctrl-tools_2.24-3build3_s390x.deb ... 218s Unpacking dctrl-tools (2.24-3build3) ... 218s Selecting previously unselected package libfreetype6:s390x. 218s Preparing to unpack .../023-libfreetype6_2.13.3+dfsg-1_s390x.deb ... 218s Unpacking libfreetype6:s390x (2.13.3+dfsg-1) ... 218s Selecting previously unselected package fonts-dejavu-mono. 218s Preparing to unpack .../024-fonts-dejavu-mono_2.37-8_all.deb ... 218s Unpacking fonts-dejavu-mono (2.37-8) ... 218s Selecting previously unselected package fonts-dejavu-core. 218s Preparing to unpack .../025-fonts-dejavu-core_2.37-8_all.deb ... 218s Unpacking fonts-dejavu-core (2.37-8) ... 218s Selecting previously unselected package fontconfig-config. 218s Preparing to unpack .../026-fontconfig-config_2.15.0-2ubuntu1_s390x.deb ... 218s Unpacking fontconfig-config (2.15.0-2ubuntu1) ... 218s Selecting previously unselected package libfontconfig1:s390x. 218s Preparing to unpack .../027-libfontconfig1_2.15.0-2ubuntu1_s390x.deb ... 218s Unpacking libfontconfig1:s390x (2.15.0-2ubuntu1) ... 218s Selecting previously unselected package fontconfig. 218s Preparing to unpack .../028-fontconfig_2.15.0-2ubuntu1_s390x.deb ... 218s Unpacking fontconfig (2.15.0-2ubuntu1) ... 218s Selecting previously unselected package fonts-font-awesome. 218s Preparing to unpack .../029-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... 218s Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... 218s Selecting previously unselected package fonts-glyphicons-halflings. 218s Preparing to unpack .../030-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... 218s Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... 218s Selecting previously unselected package fonts-lmodern. 218s Preparing to unpack .../031-fonts-lmodern_2.005-1_all.deb ... 218s Unpacking fonts-lmodern (2.005-1) ... 218s Selecting previously unselected package fonts-mathjax. 218s Preparing to unpack .../032-fonts-mathjax_2.7.9+dfsg-1_all.deb ... 218s Unpacking fonts-mathjax (2.7.9+dfsg-1) ... 218s Selecting previously unselected package libgfortran5:s390x. 218s Preparing to unpack .../033-libgfortran5_15-20250222-0ubuntu1_s390x.deb ... 218s Unpacking libgfortran5:s390x (15-20250222-0ubuntu1) ... 218s Selecting previously unselected package libgfortran-14-dev:s390x. 218s Preparing to unpack .../034-libgfortran-14-dev_14.2.0-17ubuntu3_s390x.deb ... 218s Unpacking libgfortran-14-dev:s390x (14.2.0-17ubuntu3) ... 218s Selecting previously unselected package gfortran-14-s390x-linux-gnu. 218s Preparing to unpack .../035-gfortran-14-s390x-linux-gnu_14.2.0-17ubuntu3_s390x.deb ... 218s Unpacking gfortran-14-s390x-linux-gnu (14.2.0-17ubuntu3) ... 218s Selecting previously unselected package gfortran-14. 218s Preparing to unpack .../036-gfortran-14_14.2.0-17ubuntu3_s390x.deb ... 218s Unpacking gfortran-14 (14.2.0-17ubuntu3) ... 218s Selecting previously unselected package gfortran-s390x-linux-gnu. 218s Preparing to unpack .../037-gfortran-s390x-linux-gnu_4%3a14.2.0-1ubuntu1_s390x.deb ... 218s Unpacking gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 218s Selecting previously unselected package gfortran. 218s Preparing to unpack .../038-gfortran_4%3a14.2.0-1ubuntu1_s390x.deb ... 218s Unpacking gfortran (4:14.2.0-1ubuntu1) ... 218s Selecting previously unselected package icu-devtools. 218s Preparing to unpack .../039-icu-devtools_76.1-1ubuntu2_s390x.deb ... 218s Unpacking icu-devtools (76.1-1ubuntu2) ... 218s Selecting previously unselected package javascript-common. 218s Preparing to unpack .../040-javascript-common_12_all.deb ... 218s Unpacking javascript-common (12) ... 218s Selecting previously unselected package libio-string-perl. 218s Preparing to unpack .../041-libio-string-perl_1.08-4_all.deb ... 218s Unpacking libio-string-perl (1.08-4) ... 218s Selecting previously unselected package liblatex-tounicode-perl. 218s Preparing to unpack .../042-liblatex-tounicode-perl_0.55-1_all.deb ... 218s Unpacking liblatex-tounicode-perl (0.55-1) ... 218s Selecting previously unselected package libbibtex-parser-perl. 218s Preparing to unpack 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220s Unpacking libbz2-dev:s390x (1.0.8-6) ... 220s Selecting previously unselected package libpixman-1-0:s390x. 220s Preparing to unpack .../049-libpixman-1-0_0.44.0-3_s390x.deb ... 220s Unpacking libpixman-1-0:s390x (0.44.0-3) ... 220s Selecting previously unselected package libxcb-render0:s390x. 220s Preparing to unpack .../050-libxcb-render0_1.17.0-2_s390x.deb ... 220s Unpacking libxcb-render0:s390x (1.17.0-2) ... 220s Selecting previously unselected package libxcb-shm0:s390x. 220s Preparing to unpack .../051-libxcb-shm0_1.17.0-2_s390x.deb ... 220s Unpacking libxcb-shm0:s390x (1.17.0-2) ... 220s Selecting previously unselected package libxrender1:s390x. 220s Preparing to unpack .../052-libxrender1_1%3a0.9.10-1.1build1_s390x.deb ... 220s Unpacking libxrender1:s390x (1:0.9.10-1.1build1) ... 220s Selecting previously unselected package libcairo2:s390x. 220s Preparing to unpack .../053-libcairo2_1.18.2-2_s390x.deb ... 220s Unpacking libcairo2:s390x (1.18.2-2) ... 220s Selecting previously unselected package libdatrie1:s390x. 220s Preparing to unpack .../054-libdatrie1_0.2.13-3build1_s390x.deb ... 220s Unpacking libdatrie1:s390x (0.2.13-3build1) ... 220s Selecting previously unselected package libdeflate0:s390x. 220s Preparing to unpack .../055-libdeflate0_1.23-1_s390x.deb ... 220s Unpacking libdeflate0:s390x (1.23-1) ... 220s Selecting previously unselected package libdeflate-dev:s390x. 220s Preparing to unpack .../056-libdeflate-dev_1.23-1_s390x.deb ... 220s Unpacking libdeflate-dev:s390x (1.23-1) ... 220s Selecting previously unselected package libgraphite2-3:s390x. 220s Preparing to unpack .../057-libgraphite2-3_1.3.14-2ubuntu1_s390x.deb ... 220s Unpacking libgraphite2-3:s390x (1.3.14-2ubuntu1) ... 220s Selecting previously unselected package libharfbuzz0b:s390x. 220s Preparing to unpack .../058-libharfbuzz0b_10.2.0-1_s390x.deb ... 220s Unpacking libharfbuzz0b:s390x (10.2.0-1) ... 220s Selecting previously unselected package x11-common. 220s Preparing to unpack .../059-x11-common_1%3a7.7+23ubuntu3_all.deb ... 220s Unpacking x11-common (1:7.7+23ubuntu3) ... 220s Selecting previously unselected package libice6:s390x. 220s Preparing to unpack .../060-libice6_2%3a1.1.1-1_s390x.deb ... 220s Unpacking libice6:s390x (2:1.1.1-1) ... 220s Selecting previously unselected package libicu-dev:s390x. 220s Preparing to unpack .../061-libicu-dev_76.1-1ubuntu2_s390x.deb ... 220s Unpacking libicu-dev:s390x (76.1-1ubuntu2) ... 220s Selecting previously unselected package libjpeg-turbo8:s390x. 220s Preparing to unpack .../062-libjpeg-turbo8_2.1.5-3ubuntu2_s390x.deb ... 220s Unpacking libjpeg-turbo8:s390x (2.1.5-3ubuntu2) ... 220s Selecting previously unselected package libjpeg-turbo8-dev:s390x. 220s Preparing to unpack .../063-libjpeg-turbo8-dev_2.1.5-3ubuntu2_s390x.deb ... 220s Unpacking libjpeg-turbo8-dev:s390x (2.1.5-3ubuntu2) ... 220s Selecting previously unselected package libjpeg8:s390x. 220s Preparing to unpack .../064-libjpeg8_8c-2ubuntu11_s390x.deb ... 220s Unpacking libjpeg8:s390x (8c-2ubuntu11) ... 220s Selecting previously unselected package libjpeg8-dev:s390x. 220s Preparing to unpack .../065-libjpeg8-dev_8c-2ubuntu11_s390x.deb ... 220s Unpacking libjpeg8-dev:s390x (8c-2ubuntu11) ... 220s Selecting previously unselected package libjpeg-dev:s390x. 220s Preparing to unpack .../066-libjpeg-dev_8c-2ubuntu11_s390x.deb ... 220s Unpacking libjpeg-dev:s390x (8c-2ubuntu11) ... 220s Selecting previously unselected package libjs-bootstrap. 220s Preparing to unpack .../067-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... 220s Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... 220s Selecting previously unselected package libjs-popper.js. 220s Preparing to unpack .../068-libjs-popper.js_1.16.1+ds-6_all.deb ... 220s Unpacking libjs-popper.js (1.16.1+ds-6) ... 220s Selecting previously unselected package libjs-bootstrap4. 220s Preparing to unpack .../069-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... 220s Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... 221s Selecting previously unselected package libjs-d3. 221s Preparing to unpack .../070-libjs-d3_3.5.17-4_all.deb ... 221s Unpacking libjs-d3 (3.5.17-4) ... 221s Selecting previously unselected package libjs-es5-shim. 221s Preparing to unpack .../071-libjs-es5-shim_4.6.7-2_all.deb ... 221s Unpacking libjs-es5-shim (4.6.7-2) ... 221s Selecting previously unselected package libjs-highlight.js. 221s Preparing to unpack .../072-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... 221s Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... 221s Selecting previously unselected package libjs-jquery. 221s Preparing to unpack .../073-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... 221s Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... 221s Selecting previously unselected package libjs-jquery-datatables. 221s Preparing to unpack .../074-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... 221s Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... 221s Selecting previously unselected package libjs-sifter.js. 221s Preparing to unpack .../075-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... 221s Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... 221s Selecting previously unselected package libjs-microplugin.js. 221s Preparing to unpack .../076-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... 221s Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... 221s Selecting previously unselected package libjs-jquery-selectize.js. 221s Preparing to unpack .../077-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... 221s Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... 221s Selecting previously unselected package libjs-jquery-ui. 221s Preparing to unpack .../078-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... 221s Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... 221s Selecting previously unselected package libjs-json. 221s Preparing to unpack .../079-libjs-json_0~20221030+~1.0.8-1_all.deb ... 221s Unpacking libjs-json (0~20221030+~1.0.8-1) ... 221s Selecting previously unselected package libjs-lunr. 221s Preparing to unpack .../080-libjs-lunr_2.3.9~dfsg-2_all.deb ... 221s Unpacking libjs-lunr (2.3.9~dfsg-2) ... 221s Selecting previously unselected package libjs-prettify. 221s Preparing to unpack .../081-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... 221s Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... 221s Selecting previously unselected package libkpathsea6:s390x. 221s Preparing to unpack .../082-libkpathsea6_2024.20240313.70630+ds-5build2_s390x.deb ... 221s Unpacking libkpathsea6:s390x (2024.20240313.70630+ds-5build2) ... 221s Selecting previously unselected package liblapack3:s390x. 221s Preparing to unpack .../083-liblapack3_3.12.1-2_s390x.deb ... 221s Unpacking liblapack3:s390x (3.12.1-2) ... 221s Selecting previously unselected package liblapack-dev:s390x. 221s Preparing to unpack .../084-liblapack-dev_3.12.1-2_s390x.deb ... 221s Unpacking liblapack-dev:s390x (3.12.1-2) ... 221s Selecting previously unselected package liblua5.4-0:s390x. 221s Preparing to unpack .../085-liblua5.4-0_5.4.7-1_s390x.deb ... 221s Unpacking liblua5.4-0:s390x (5.4.7-1) ... 221s Selecting previously unselected package libmpfi0:s390x. 221s Preparing to unpack .../086-libmpfi0_1.5.4+ds-4_s390x.deb ... 221s Unpacking libmpfi0:s390x (1.5.4+ds-4) ... 221s Selecting previously unselected package libncurses-dev:s390x. 221s Preparing to unpack .../087-libncurses-dev_6.5+20250216-2_s390x.deb ... 221s Unpacking libncurses-dev:s390x (6.5+20250216-2) ... 221s Selecting previously unselected package libthai-data. 221s Preparing to unpack .../088-libthai-data_0.1.29-2build1_all.deb ... 221s Unpacking libthai-data (0.1.29-2build1) ... 221s Selecting previously unselected package libthai0:s390x. 221s Preparing to unpack .../089-libthai0_0.1.29-2build1_s390x.deb ... 221s Unpacking libthai0:s390x (0.1.29-2build1) ... 221s Selecting previously unselected package libpango-1.0-0:s390x. 221s Preparing to unpack .../090-libpango-1.0-0_1.56.2-1_s390x.deb ... 221s Unpacking libpango-1.0-0:s390x (1.56.2-1) ... 221s Selecting previously unselected package libpangoft2-1.0-0:s390x. 221s Preparing to unpack .../091-libpangoft2-1.0-0_1.56.2-1_s390x.deb ... 221s Unpacking libpangoft2-1.0-0:s390x (1.56.2-1) ... 221s Selecting previously unselected package libpangocairo-1.0-0:s390x. 221s Preparing to unpack .../092-libpangocairo-1.0-0_1.56.2-1_s390x.deb ... 221s Unpacking libpangocairo-1.0-0:s390x (1.56.2-1) ... 221s Selecting previously unselected package libpaper2:s390x. 221s Preparing to unpack .../093-libpaper2_2.2.5-0.3_s390x.deb ... 221s Unpacking libpaper2:s390x (2.2.5-0.3) ... 221s Selecting previously unselected package libpaper-utils. 221s Preparing to unpack .../094-libpaper-utils_2.2.5-0.3_s390x.deb ... 221s Unpacking libpaper-utils (2.2.5-0.3) ... 221s Selecting previously unselected package libpcre2-16-0:s390x. 221s Preparing to unpack .../095-libpcre2-16-0_10.45-1_s390x.deb ... 221s Unpacking libpcre2-16-0:s390x (10.45-1) ... 221s Selecting previously unselected package libpcre2-32-0:s390x. 221s Preparing to unpack .../096-libpcre2-32-0_10.45-1_s390x.deb ... 221s Unpacking libpcre2-32-0:s390x (10.45-1) ... 221s Selecting previously unselected package libpcre2-posix3:s390x. 221s Preparing to unpack .../097-libpcre2-posix3_10.45-1_s390x.deb ... 221s Unpacking libpcre2-posix3:s390x (10.45-1) ... 221s Selecting previously unselected package libpcre2-dev:s390x. 221s Preparing to unpack .../098-libpcre2-dev_10.45-1_s390x.deb ... 221s Unpacking libpcre2-dev:s390x (10.45-1) ... 221s Selecting previously unselected package libpkgconf3:s390x. 221s Preparing to unpack .../099-libpkgconf3_1.8.1-4_s390x.deb ... 221s Unpacking libpkgconf3:s390x (1.8.1-4) ... 221s Selecting previously unselected package zlib1g-dev:s390x. 221s Preparing to unpack .../100-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1ubuntu1_s390x.deb ... 221s Unpacking zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1ubuntu1) ... 221s Selecting previously unselected package libpng-dev:s390x. 221s Preparing to unpack .../101-libpng-dev_1.6.47-1_s390x.deb ... 221s Unpacking libpng-dev:s390x (1.6.47-1) ... 221s Selecting previously unselected package libpotrace0:s390x. 221s Preparing to unpack .../102-libpotrace0_1.16-2build1_s390x.deb ... 221s Unpacking libpotrace0:s390x (1.16-2build1) ... 221s Selecting previously unselected package libptexenc1:s390x. 221s Preparing to unpack .../103-libptexenc1_2024.20240313.70630+ds-5build2_s390x.deb ... 221s Unpacking libptexenc1:s390x (2024.20240313.70630+ds-5build2) ... 221s Selecting previously unselected package libreadline-dev:s390x. 221s Preparing to unpack .../104-libreadline-dev_8.2-6_s390x.deb ... 221s Unpacking libreadline-dev:s390x (8.2-6) ... 221s Selecting previously unselected package libsharpyuv0:s390x. 221s Preparing to unpack .../105-libsharpyuv0_1.5.0-0.1_s390x.deb ... 221s Unpacking libsharpyuv0:s390x (1.5.0-0.1) ... 221s Selecting previously unselected package libsm6:s390x. 221s Preparing to unpack .../106-libsm6_2%3a1.2.4-1_s390x.deb ... 221s Unpacking libsm6:s390x (2:1.2.4-1) ... 221s Selecting previously unselected package libsynctex2:s390x. 221s Preparing to unpack .../107-libsynctex2_2024.20240313.70630+ds-5build2_s390x.deb ... 221s Unpacking libsynctex2:s390x (2024.20240313.70630+ds-5build2) ... 221s Selecting previously unselected package libtcl8.6:s390x. 221s Preparing to unpack .../108-libtcl8.6_8.6.16+dfsg-1_s390x.deb ... 221s Unpacking libtcl8.6:s390x (8.6.16+dfsg-1) ... 221s Selecting previously unselected package libteckit0:s390x. 221s Preparing to unpack .../109-libteckit0_2.5.12+ds1-1_s390x.deb ... 221s Unpacking libteckit0:s390x (2.5.12+ds1-1) ... 221s Selecting previously unselected package libtexlua53-5:s390x. 221s Preparing to unpack .../110-libtexlua53-5_2024.20240313.70630+ds-5build2_s390x.deb ... 221s Unpacking libtexlua53-5:s390x (2024.20240313.70630+ds-5build2) ... 221s Selecting previously unselected package libjbig0:s390x. 221s Preparing to unpack .../111-libjbig0_2.1-6.1ubuntu2_s390x.deb ... 221s Unpacking libjbig0:s390x (2.1-6.1ubuntu2) ... 221s Selecting previously unselected package libwebp7:s390x. 221s Preparing to unpack .../112-libwebp7_1.5.0-0.1_s390x.deb ... 221s Unpacking libwebp7:s390x (1.5.0-0.1) ... 221s Selecting previously unselected package libtiff6:s390x. 221s Preparing to unpack .../113-libtiff6_4.5.1+git230720-4ubuntu4_s390x.deb ... 221s Unpacking libtiff6:s390x (4.5.1+git230720-4ubuntu4) ... 221s Selecting previously unselected package libxft2:s390x. 221s Preparing to unpack .../114-libxft2_2.3.6-1build1_s390x.deb ... 221s Unpacking libxft2:s390x (2.3.6-1build1) ... 221s Selecting previously unselected package libxss1:s390x. 221s Preparing to unpack .../115-libxss1_1%3a1.2.3-1build3_s390x.deb ... 221s Unpacking libxss1:s390x (1:1.2.3-1build3) ... 221s Selecting previously unselected package libtk8.6:s390x. 221s Preparing to unpack .../116-libtk8.6_8.6.16-1_s390x.deb ... 221s Unpacking libtk8.6:s390x (8.6.16-1) ... 221s Selecting previously unselected package libxt6t64:s390x. 221s Preparing to unpack .../117-libxt6t64_1%3a1.2.1-1.2build1_s390x.deb ... 221s Unpacking libxt6t64:s390x (1:1.2.1-1.2build1) ... 221s Selecting previously unselected package libxmu6:s390x. 221s Preparing to unpack .../118-libxmu6_2%3a1.1.3-3build2_s390x.deb ... 221s Unpacking libxmu6:s390x (2:1.1.3-3build2) ... 221s Selecting previously unselected package libxpm4:s390x. 221s Preparing to unpack .../119-libxpm4_1%3a3.5.17-1build2_s390x.deb ... 221s Unpacking libxpm4:s390x (1:3.5.17-1build2) ... 221s Selecting previously unselected package libxaw7:s390x. 221s Preparing to unpack .../120-libxaw7_2%3a1.0.16-1_s390x.deb ... 221s Unpacking libxaw7:s390x (2:1.0.16-1) ... 222s Selecting previously unselected package libxi6:s390x. 222s Preparing to unpack .../121-libxi6_2%3a1.8.2-1_s390x.deb ... 222s Unpacking libxi6:s390x (2:1.8.2-1) ... 222s Selecting previously unselected package libzzip-0-13t64:s390x. 222s Preparing to unpack .../122-libzzip-0-13t64_0.13.78+dfsg.1-0.1_s390x.deb ... 222s Unpacking libzzip-0-13t64:s390x (0.13.78+dfsg.1-0.1) ... 222s Selecting previously unselected package zip. 222s Preparing to unpack .../123-zip_3.0-14ubuntu2_s390x.deb ... 222s Unpacking zip (3.0-14ubuntu2) ... 222s Selecting previously unselected package unzip. 222s Preparing to unpack .../124-unzip_6.0-28ubuntu6_s390x.deb ... 222s Unpacking unzip (6.0-28ubuntu6) ... 222s Selecting previously unselected package xdg-utils. 222s Preparing to unpack .../125-xdg-utils_1.2.1-2ubuntu1_all.deb ... 222s Unpacking xdg-utils (1.2.1-2ubuntu1) ... 222s Selecting previously unselected package r-base-core. 222s Preparing to unpack .../126-r-base-core_4.4.3-1_s390x.deb ... 222s Unpacking r-base-core (4.4.3-1) ... 222s Selecting previously unselected package r-cran-littler. 222s Preparing to unpack .../127-r-cran-littler_0.3.20-2_s390x.deb ... 222s Unpacking r-cran-littler (0.3.20-2) ... 222s Selecting previously unselected package littler. 222s Preparing to unpack .../128-littler_0.3.20-2_all.deb ... 222s Unpacking littler (0.3.20-2) ... 222s Selecting previously unselected package node-bootstrap-sass. 222s Preparing to unpack .../129-node-bootstrap-sass_3.4.3-2_all.deb ... 222s Unpacking node-bootstrap-sass (3.4.3-2) ... 222s Selecting previously unselected package node-html5shiv. 222s Preparing to unpack .../130-node-html5shiv_3.7.3+dfsg-5_all.deb ... 222s Unpacking node-html5shiv (3.7.3+dfsg-5) ... 222s Selecting previously unselected package node-normalize.css. 222s Preparing to unpack .../131-node-normalize.css_8.0.1-5_all.deb ... 222s Unpacking node-normalize.css (8.0.1-5) ... 222s Selecting previously unselected package pandoc-data. 222s Preparing to unpack .../132-pandoc-data_3.1.11.1-3build1_all.deb ... 222s Unpacking pandoc-data (3.1.11.1-3build1) ... 222s Selecting previously unselected package pandoc. 222s Preparing to unpack .../133-pandoc_3.1.11.1+ds-2_s390x.deb ... 222s Unpacking pandoc (3.1.11.1+ds-2) ... 223s Selecting previously unselected package liblzma-dev:s390x. 223s Preparing to unpack .../134-liblzma-dev_5.6.4-1_s390x.deb ... 223s Unpacking liblzma-dev:s390x (5.6.4-1) ... 223s Selecting previously unselected package pkgconf-bin. 223s Preparing to unpack .../135-pkgconf-bin_1.8.1-4_s390x.deb ... 223s Unpacking pkgconf-bin (1.8.1-4) ... 223s Selecting previously unselected package pkgconf:s390x. 223s Preparing to unpack .../136-pkgconf_1.8.1-4_s390x.deb ... 223s Unpacking pkgconf:s390x (1.8.1-4) ... 223s Selecting previously unselected package libtirpc-dev:s390x. 223s Preparing to unpack .../137-libtirpc-dev_1.3.4+ds-1.3_s390x.deb ... 223s Unpacking libtirpc-dev:s390x (1.3.4+ds-1.3) ... 223s Selecting previously unselected package r-base-dev. 223s Preparing to unpack .../138-r-base-dev_4.4.3-1_all.deb ... 223s Unpacking r-base-dev (4.4.3-1) ... 223s Selecting previously unselected package pkg-r-autopkgtest. 223s Preparing to unpack .../139-pkg-r-autopkgtest_20231212ubuntu1_all.deb ... 223s Unpacking pkg-r-autopkgtest (20231212ubuntu1) ... 223s Selecting previously unselected package r-bioc-biocgenerics. 223s Preparing to unpack .../140-r-bioc-biocgenerics_0.52.0-2_all.deb ... 223s Unpacking r-bioc-biocgenerics (0.52.0-2) ... 223s Selecting previously unselected package r-bioc-biobase. 223s Preparing to unpack .../141-r-bioc-biobase_2.66.0-2_s390x.deb ... 223s Unpacking r-bioc-biobase (2.66.0-2) ... 223s Selecting previously unselected package r-bioc-zlibbioc. 223s Preparing to unpack .../142-r-bioc-zlibbioc_1.52.0+dfsg-2_all.deb ... 223s Unpacking r-bioc-zlibbioc (1.52.0+dfsg-2) ... 223s Selecting previously unselected package r-bioc-affyio. 223s Preparing to unpack .../143-r-bioc-affyio_1.76.0-2_s390x.deb ... 223s Unpacking r-bioc-affyio (1.76.0-2) ... 223s Selecting previously unselected package r-cran-biocmanager. 223s Preparing to unpack .../144-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... 223s Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... 223s Selecting previously unselected package r-bioc-preprocesscore. 223s Preparing to unpack .../145-r-bioc-preprocesscore_1.68.0+ds-2_s390x.deb ... 223s Unpacking r-bioc-preprocesscore (1.68.0+ds-2) ... 223s Selecting previously unselected package r-bioc-affy. 223s Preparing to unpack .../146-r-bioc-affy_1.84.0-2_s390x.deb ... 223s Unpacking r-bioc-affy (1.84.0-2) ... 224s Selecting previously unselected package r-bioc-s4vectors. 224s Preparing to unpack .../147-r-bioc-s4vectors_0.44.0+dfsg-2_s390x.deb ... 224s Unpacking r-bioc-s4vectors (0.44.0+dfsg-2) ... 224s Selecting previously unselected package r-bioc-iranges. 224s Preparing to unpack .../148-r-bioc-iranges_2.40.1-2_s390x.deb ... 224s Unpacking r-bioc-iranges (2.40.1-2) ... 224s Selecting previously unselected package r-cran-dbi. 224s Preparing to unpack .../149-r-cran-dbi_1.2.3-1_all.deb ... 224s Unpacking r-cran-dbi (1.2.3-1) ... 224s Selecting previously unselected package r-cran-bit. 224s Preparing to unpack .../150-r-cran-bit_4.6.0+dfsg-1_s390x.deb ... 224s Unpacking r-cran-bit (4.6.0+dfsg-1) ... 224s Selecting previously unselected package r-cran-bit64. 224s Preparing to unpack .../151-r-cran-bit64_4.6.0-1-1ubuntu2_s390x.deb ... 224s Unpacking r-cran-bit64 (4.6.0-1-1ubuntu2) ... 224s Selecting previously unselected package r-cran-rlang. 224s Preparing to unpack .../152-r-cran-rlang_1.1.5-1_s390x.deb ... 224s Unpacking r-cran-rlang (1.1.5-1) ... 224s Selecting previously unselected package r-cran-cli. 224s Preparing to unpack .../153-r-cran-cli_3.6.4-1_s390x.deb ... 224s Unpacking r-cran-cli (3.6.4-1) ... 224s Selecting previously unselected package r-cran-glue. 224s Preparing to unpack .../154-r-cran-glue_1.8.0-1_s390x.deb ... 224s Unpacking r-cran-glue (1.8.0-1) ... 224s Selecting previously unselected package r-cran-lifecycle. 224s Preparing to unpack .../155-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... 224s Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... 224s Selecting previously unselected package r-cran-vctrs. 224s Preparing to unpack .../156-r-cran-vctrs_0.6.5-1_s390x.deb ... 224s Unpacking r-cran-vctrs (0.6.5-1) ... 224s Selecting previously unselected package r-cran-blob. 224s Preparing to unpack .../157-r-cran-blob_1.2.4-1_all.deb ... 224s Unpacking r-cran-blob (1.2.4-1) ... 224s Selecting previously unselected package r-cran-fastmap. 224s Preparing to unpack .../158-r-cran-fastmap_1.2.0-1_s390x.deb ... 224s Unpacking r-cran-fastmap (1.2.0-1) ... 224s Selecting previously unselected package r-cran-cachem. 224s Preparing to unpack .../159-r-cran-cachem_1.1.0-1_s390x.deb ... 224s Unpacking r-cran-cachem (1.1.0-1) ... 224s Selecting previously unselected package r-cran-memoise. 224s Preparing to unpack .../160-r-cran-memoise_2.0.1-1_all.deb ... 224s Unpacking r-cran-memoise (2.0.1-1) ... 224s Selecting previously unselected package r-cran-pkgconfig. 224s Preparing to unpack .../161-r-cran-pkgconfig_2.0.3-2build1_all.deb ... 224s Unpacking r-cran-pkgconfig (2.0.3-2build1) ... 224s Selecting previously unselected package r-cran-plogr. 224s Preparing to unpack .../162-r-cran-plogr_0.2.0-3build1_all.deb ... 224s Unpacking r-cran-plogr (0.2.0-3build1) ... 224s Selecting previously unselected package r-cran-cpp11. 224s Preparing to unpack .../163-r-cran-cpp11_0.5.2-1_all.deb ... 224s Unpacking r-cran-cpp11 (0.5.2-1) ... 224s Selecting previously unselected package r-cran-rsqlite. 224s Preparing to unpack .../164-r-cran-rsqlite_2.3.9-1_s390x.deb ... 224s Unpacking r-cran-rsqlite (2.3.9-1) ... 224s Selecting previously unselected package r-cran-curl. 224s Preparing to unpack .../165-r-cran-curl_6.2.1+dfsg-1ubuntu1_s390x.deb ... 224s Unpacking r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 224s Selecting previously unselected package r-cran-jsonlite. 224s Preparing to unpack .../166-r-cran-jsonlite_1.9.1+dfsg-1_s390x.deb ... 224s Unpacking r-cran-jsonlite (1.9.1+dfsg-1) ... 224s Selecting previously unselected package r-cran-mime. 224s Preparing to unpack .../167-r-cran-mime_0.12-2_s390x.deb ... 224s Unpacking r-cran-mime (0.12-2) ... 224s Selecting previously unselected package r-cran-sys. 224s Preparing to unpack .../168-r-cran-sys_3.4.3-1_s390x.deb ... 224s Unpacking r-cran-sys (3.4.3-1) ... 224s Selecting previously unselected package r-cran-askpass. 224s Preparing to unpack .../169-r-cran-askpass_1.2.1-1_s390x.deb ... 224s Unpacking r-cran-askpass (1.2.1-1) ... 224s Selecting previously unselected package r-cran-openssl. 224s Preparing to unpack .../170-r-cran-openssl_2.3.2+dfsg-1_s390x.deb ... 224s Unpacking r-cran-openssl (2.3.2+dfsg-1) ... 224s Selecting previously unselected package r-cran-r6. 224s Preparing to unpack .../171-r-cran-r6_2.6.1-1_all.deb ... 224s Unpacking r-cran-r6 (2.6.1-1) ... 224s Selecting previously unselected package r-cran-httr. 224s Preparing to unpack .../172-r-cran-httr_1.4.7+dfsg-1_all.deb ... 224s Unpacking r-cran-httr (1.4.7+dfsg-1) ... 224s Selecting previously unselected package r-cran-png. 224s Preparing to unpack .../173-r-cran-png_0.1-8-1build2_s390x.deb ... 224s Unpacking r-cran-png (0.1-8-1build2) ... 224s Selecting previously unselected package r-bioc-xvector. 224s Preparing to unpack .../174-r-bioc-xvector_0.46.0-2_s390x.deb ... 224s Unpacking r-bioc-xvector (0.46.0-2) ... 224s Selecting previously unselected package r-bioc-ucsc.utils. 224s Preparing to unpack .../175-r-bioc-ucsc.utils_1.2.0+ds-2_all.deb ... 224s Unpacking r-bioc-ucsc.utils (1.2.0+ds-2) ... 224s Selecting previously unselected package r-bioc-genomeinfodbdata. 224s Preparing to unpack .../176-r-bioc-genomeinfodbdata_1.2.13-2_all.deb ... 224s Unpacking r-bioc-genomeinfodbdata (1.2.13-2) ... 224s Selecting previously unselected package r-bioc-genomeinfodb. 224s Preparing to unpack .../177-r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb ... 224s Unpacking r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 224s Selecting previously unselected package r-cran-crayon. 224s Preparing to unpack .../178-r-cran-crayon_1.5.3-1_all.deb ... 224s Unpacking r-cran-crayon (1.5.3-1) ... 224s Selecting previously unselected package r-bioc-biostrings. 224s Preparing to unpack .../179-r-bioc-biostrings_2.74.1+dfsg-2_s390x.deb ... 224s Unpacking r-bioc-biostrings (2.74.1+dfsg-2) ... 224s Selecting previously unselected package r-bioc-keggrest. 224s Preparing to unpack .../180-r-bioc-keggrest_1.46.0+dfsg-2_all.deb ... 224s Unpacking r-bioc-keggrest (1.46.0+dfsg-2) ... 224s Selecting previously unselected package r-bioc-annotationdbi. 224s Preparing to unpack .../181-r-bioc-annotationdbi_1.68.0-2_all.deb ... 224s Unpacking r-bioc-annotationdbi (1.68.0-2) ... 224s Selecting previously unselected package r-bioc-biocio. 224s Preparing to unpack .../182-r-bioc-biocio_1.16.0+dfsg-2_all.deb ... 224s Unpacking r-bioc-biocio (1.16.0+dfsg-2) ... 224s Selecting previously unselected package r-cran-formatr. 224s Preparing to unpack .../183-r-cran-formatr_1.14-2_all.deb ... 224s Unpacking r-cran-formatr (1.14-2) ... 224s Selecting previously unselected package r-cran-lambda.r. 224s Preparing to unpack .../184-r-cran-lambda.r_1.2.4-2build1_all.deb ... 224s Unpacking r-cran-lambda.r (1.2.4-2build1) ... 224s Selecting previously unselected package r-cran-futile.options. 224s Preparing to unpack .../185-r-cran-futile.options_1.0.1-3build1_all.deb ... 224s Unpacking r-cran-futile.options (1.0.1-3build1) ... 224s Selecting previously unselected package r-cran-futile.logger. 224s Preparing to unpack .../186-r-cran-futile.logger_1.4.3-4build1_all.deb ... 224s Unpacking r-cran-futile.logger (1.4.3-4build1) ... 224s Selecting previously unselected package r-cran-snow. 224s Preparing to unpack .../187-r-cran-snow_1%3a0.4.4-2_all.deb ... 224s Unpacking r-cran-snow (1:0.4.4-2) ... 224s Selecting previously unselected package r-cran-codetools. 224s Preparing to unpack .../188-r-cran-codetools_0.2-20-1_all.deb ... 224s Unpacking r-cran-codetools (0.2-20-1) ... 224s Selecting previously unselected package r-cran-bh. 224s Preparing to unpack .../189-r-cran-bh_1.84.0-1_all.deb ... 224s Unpacking r-cran-bh (1.84.0-1) ... 224s Selecting previously unselected package r-bioc-biocparallel. 224s Preparing to unpack .../190-r-bioc-biocparallel_1.40.0-2_s390x.deb ... 224s Unpacking r-bioc-biocparallel (1.40.0-2) ... 224s Selecting previously unselected package r-cran-base64enc. 224s Preparing to unpack .../191-r-cran-base64enc_0.1-3-3_s390x.deb ... 224s Unpacking r-cran-base64enc (0.1-3-3) ... 225s Selecting previously unselected package r-cran-digest. 225s Preparing to unpack .../192-r-cran-digest_0.6.37-1_s390x.deb ... 225s Unpacking r-cran-digest (0.6.37-1) ... 225s Selecting previously unselected package r-cran-htmltools. 225s Preparing to unpack .../193-r-cran-htmltools_0.5.8.1-1_s390x.deb ... 225s Unpacking r-cran-htmltools (0.5.8.1-1) ... 225s Selecting previously unselected package r-cran-evaluate. 225s Preparing to unpack .../194-r-cran-evaluate_1.0.3-1_all.deb ... 225s Unpacking r-cran-evaluate (1.0.3-1) ... 225s Selecting previously unselected package r-cran-xfun. 225s Preparing to unpack .../195-r-cran-xfun_0.51+dfsg-1_s390x.deb ... 225s Unpacking r-cran-xfun (0.51+dfsg-1) ... 225s Selecting previously unselected package r-cran-highr. 225s Preparing to unpack .../196-r-cran-highr_0.11+dfsg-1_all.deb ... 225s Unpacking r-cran-highr (0.11+dfsg-1) ... 225s Selecting previously unselected package r-cran-yaml. 225s Preparing to unpack .../197-r-cran-yaml_2.3.10-1_s390x.deb ... 225s Unpacking r-cran-yaml (2.3.10-1) ... 225s Selecting previously unselected package libjs-mathjax. 225s Preparing to unpack .../198-libjs-mathjax_2.7.9+dfsg-1_all.deb ... 225s Unpacking libjs-mathjax (2.7.9+dfsg-1) ... 225s Selecting previously unselected package r-cran-knitr. 225s Preparing to unpack .../199-r-cran-knitr_1.49+dfsg-1_all.deb ... 225s Unpacking r-cran-knitr (1.49+dfsg-1) ... 225s Selecting previously unselected package r-cran-jquerylib. 225s Preparing to unpack .../200-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... 225s Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... 225s Selecting previously unselected package r-cran-fs. 225s Preparing to unpack .../201-r-cran-fs_1.6.5+dfsg-1_s390x.deb ... 225s Unpacking r-cran-fs (1.6.5+dfsg-1) ... 225s Selecting previously unselected package r-cran-rappdirs. 225s Preparing to unpack .../202-r-cran-rappdirs_0.3.3-1_s390x.deb ... 225s Unpacking r-cran-rappdirs (0.3.3-1) ... 225s Selecting previously unselected package r-cran-sass. 225s Preparing to unpack .../203-r-cran-sass_0.4.9+dfsg-1_s390x.deb ... 225s Unpacking r-cran-sass (0.4.9+dfsg-1) ... 225s Selecting previously unselected package r-cran-bslib. 225s Preparing to unpack .../204-r-cran-bslib_0.8.0+dfsg-1_all.deb ... 225s Unpacking r-cran-bslib (0.8.0+dfsg-1) ... 225s Selecting previously unselected package r-cran-fontawesome. 225s Preparing to unpack .../205-r-cran-fontawesome_0.5.3-1_all.deb ... 225s Unpacking r-cran-fontawesome (0.5.3-1) ... 225s Selecting previously unselected package r-cran-tinytex. 225s Preparing to unpack .../206-r-cran-tinytex_0.56-1_all.deb ... 225s Unpacking r-cran-tinytex (0.56-1) ... 225s Selecting previously unselected package libjs-modernizr. 225s Preparing to unpack .../207-libjs-modernizr_3.13.0-0.1_all.deb ... 225s Unpacking libjs-modernizr (3.13.0-0.1) ... 225s Selecting previously unselected package r-cran-pkgkitten. 225s Preparing to unpack .../208-r-cran-pkgkitten_0.2.4-1_all.deb ... 225s Unpacking r-cran-pkgkitten (0.2.4-1) ... 225s Selecting previously unselected package r-cran-rcpp. 225s Preparing to unpack .../209-r-cran-rcpp_1.0.14-1_s390x.deb ... 225s Unpacking r-cran-rcpp (1.0.14-1) ... 225s Selecting previously unselected package r-cran-later. 225s Preparing to unpack .../210-r-cran-later_1.4.1+dfsg-1_s390x.deb ... 225s Unpacking r-cran-later (1.4.1+dfsg-1) ... 225s Selecting previously unselected package r-cran-magrittr. 225s Preparing to unpack .../211-r-cran-magrittr_2.0.3-1_s390x.deb ... 225s Unpacking r-cran-magrittr (2.0.3-1) ... 225s Selecting previously unselected package r-cran-promises. 225s Preparing to unpack .../212-r-cran-promises_1.3.2+dfsg-1_s390x.deb ... 225s Unpacking r-cran-promises (1.3.2+dfsg-1) ... 225s Selecting previously unselected package r-cran-httpuv. 225s Preparing to unpack .../213-r-cran-httpuv_1.6.15+dfsg-1_s390x.deb ... 225s Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... 225s Selecting previously unselected package r-cran-xtable. 225s Preparing to unpack .../214-r-cran-xtable_1%3a1.8-4-2_all.deb ... 225s Unpacking r-cran-xtable (1:1.8-4-2) ... 226s Selecting previously unselected package r-cran-sourcetools. 226s Preparing to unpack .../215-r-cran-sourcetools_0.1.7-1-1_s390x.deb ... 226s Unpacking r-cran-sourcetools (0.1.7-1-1) ... 226s Selecting previously unselected package r-cran-withr. 226s Preparing to unpack .../216-r-cran-withr_3.0.2+dfsg-1_all.deb ... 226s Unpacking r-cran-withr (3.0.2+dfsg-1) ... 226s Selecting previously unselected package r-cran-commonmark. 226s Preparing to unpack .../217-r-cran-commonmark_1.9.2-2_s390x.deb ... 226s Unpacking r-cran-commonmark (1.9.2-2) ... 226s Selecting previously unselected package libjs-twitter-bootstrap-datepicker. 226s Preparing to unpack .../218-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... 226s Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... 226s Selecting previously unselected package r-cran-shiny. 226s Preparing to unpack .../219-r-cran-shiny_1.10.0+dfsg-2_all.deb ... 226s Unpacking r-cran-shiny (1.10.0+dfsg-2) ... 226s Selecting previously unselected package r-cran-rmarkdown. 226s Preparing to unpack .../220-r-cran-rmarkdown_2.29+dfsg-1_all.deb ... 226s Unpacking r-cran-rmarkdown (2.29+dfsg-1) ... 226s Selecting previously unselected package r-cran-bookdown. 226s Preparing to unpack .../221-r-cran-bookdown_0.42+dfsg-1_all.deb ... 226s Unpacking r-cran-bookdown (0.42+dfsg-1) ... 226s Selecting previously unselected package tex-common. 226s Preparing to unpack .../222-tex-common_6.19_all.deb ... 226s Unpacking tex-common (6.19) ... 226s Selecting previously unselected package t1utils. 226s Preparing to unpack .../223-t1utils_1.41-4build3_s390x.deb ... 226s Unpacking t1utils (1.41-4build3) ... 226s Selecting previously unselected package texlive-binaries. 226s Preparing to unpack .../224-texlive-binaries_2024.20240313.70630+ds-5build2_s390x.deb ... 226s Unpacking texlive-binaries (2024.20240313.70630+ds-5build2) ... 226s Selecting previously unselected package texlive-base. 226s Preparing to unpack .../225-texlive-base_2024.20250114-1_all.deb ... 226s Unpacking texlive-base (2024.20250114-1) ... 227s Selecting previously unselected package texlive-latex-base. 227s Preparing to unpack .../226-texlive-latex-base_2024.20250114-1_all.deb ... 227s Unpacking texlive-latex-base (2024.20250114-1) ... 227s Selecting previously unselected package texlive-bibtex-extra. 227s Preparing to unpack .../227-texlive-bibtex-extra_2024.20250114-1_all.deb ... 227s Unpacking texlive-bibtex-extra (2024.20250114-1) ... 231s Selecting previously unselected package r-bioc-biocversion. 231s Preparing to unpack .../228-r-bioc-biocversion_3.20.0-2_all.deb ... 231s Unpacking r-bioc-biocversion (3.20.0-2) ... 231s Selecting previously unselected package r-bioc-biocstyle. 231s Preparing to unpack .../229-r-bioc-biocstyle_2.34.0+dfsg-1_all.deb ... 231s Unpacking r-bioc-biocstyle (2.34.0+dfsg-1) ... 231s Selecting previously unselected package r-bioc-genomicranges. 231s Preparing to unpack .../230-r-bioc-genomicranges_1.58.0+dfsg-2_s390x.deb ... 231s Unpacking r-bioc-genomicranges (1.58.0+dfsg-2) ... 231s Selecting previously unselected package r-cran-xml. 231s Preparing to unpack .../231-r-cran-xml_3.99-0.18-1_s390x.deb ... 231s Unpacking r-cran-xml (3.99-0.18-1) ... 231s Selecting previously unselected package r-cran-bitops. 231s Preparing to unpack .../232-r-cran-bitops_1.0-9-1_s390x.deb ... 231s Unpacking r-cran-bitops (1.0-9-1) ... 231s Selecting previously unselected package r-bioc-rhtslib. 231s Preparing to unpack .../233-r-bioc-rhtslib_3.2.0+dfsg-2_s390x.deb ... 231s Unpacking r-bioc-rhtslib (3.2.0+dfsg-2) ... 231s Selecting previously unselected package r-bioc-rsamtools. 231s Preparing to unpack .../234-r-bioc-rsamtools_2.22.0+dfsg-2_s390x.deb ... 231s Unpacking r-bioc-rsamtools (2.22.0+dfsg-2) ... 231s Selecting previously unselected package r-cran-matrixstats. 231s Preparing to unpack .../235-r-cran-matrixstats_1.5.0-1_s390x.deb ... 231s Unpacking r-cran-matrixstats (1.5.0-1) ... 231s Selecting previously unselected package r-bioc-matrixgenerics. 231s Preparing to unpack .../236-r-bioc-matrixgenerics_1.18.1-1_all.deb ... 231s Unpacking r-bioc-matrixgenerics (1.18.1-1) ... 231s Selecting previously unselected package r-cran-lattice. 231s Preparing to unpack .../237-r-cran-lattice_0.22-6-1_s390x.deb ... 231s Unpacking r-cran-lattice (0.22-6-1) ... 231s Selecting previously unselected package r-cran-matrix. 231s Preparing to unpack .../238-r-cran-matrix_1.7-3-1_s390x.deb ... 231s Unpacking r-cran-matrix (1.7-3-1) ... 231s Selecting previously unselected package r-cran-abind. 231s Preparing to unpack .../239-r-cran-abind_1.4-8-1_all.deb ... 231s Unpacking r-cran-abind (1.4-8-1) ... 231s Selecting previously unselected package r-bioc-s4arrays. 231s Preparing to unpack .../240-r-bioc-s4arrays_1.6.0+dfsg-2_s390x.deb ... 231s Unpacking r-bioc-s4arrays (1.6.0+dfsg-2) ... 231s Selecting previously unselected package r-bioc-sparsearray. 231s Preparing to unpack .../241-r-bioc-sparsearray_1.6.2+dfsg-1_s390x.deb ... 231s Unpacking r-bioc-sparsearray (1.6.2+dfsg-1) ... 231s Selecting previously unselected package r-bioc-delayedarray. 231s Preparing to unpack .../242-r-bioc-delayedarray_0.32.0+dfsg-2_s390x.deb ... 231s Unpacking r-bioc-delayedarray (0.32.0+dfsg-2) ... 231s Selecting previously unselected package 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(2.0.3-1) ... 236s Setting up r-cran-rappdirs (0.3.3-1) ... 236s Setting up r-bioc-genomeinfodbdata (1.2.13-2) ... 236s Setting up r-cran-littler (0.3.20-2) ... 236s Setting up r-cran-bh (1.84.0-1) ... 236s Setting up r-cran-fs (1.6.5+dfsg-1) ... 236s Setting up r-cran-rcpp (1.0.14-1) ... 236s Setting up r-cran-curl (6.2.1+dfsg-1ubuntu1) ... 236s Setting up r-cran-codetools (0.2-20-1) ... 236s Setting up r-cran-brio (1.1.5-1) ... 236s Setting up r-cran-diffobj (0.3.5-1) ... 236s Setting up r-bioc-biocgenerics (0.52.0-2) ... 236s Setting up r-cran-rlang (1.1.5-1) ... 236s Setting up r-cran-matrixstats (1.5.0-1) ... 236s Setting up littler (0.3.20-2) ... 236s Setting up gfortran-s390x-linux-gnu (4:14.2.0-1ubuntu1) ... 236s Setting up r-bioc-matrixgenerics (1.18.1-1) ... 236s Setting up r-cran-xfun (0.51+dfsg-1) ... 236s Setting up r-cran-sys (3.4.3-1) ... 236s Setting up r-cran-plogr (0.2.0-3build1) ... 236s Setting up r-cran-withr (3.0.2+dfsg-1) ... 236s Setting up r-cran-processx 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Setting up gcc (4:14.2.0-1ubuntu1) ... 236s Setting up r-bioc-zlibbioc (1.52.0+dfsg-2) ... 236s Setting up r-cran-askpass (1.2.1-1) ... 236s Setting up r-cran-fastmap (1.2.0-1) ... 236s Setting up r-cran-png (0.1-8-1build2) ... 236s Setting up r-bioc-biobase (2.66.0-2) ... 236s Setting up r-cran-jsonlite (1.9.1+dfsg-1) ... 236s Setting up r-cran-pkgconfig (2.0.3-2build1) ... 236s Setting up texlive-latex-base (2024.20250114-1) ... 236s Setting up r-cran-rex (1.2.1-1) ... 236s Setting up r-cran-cpp11 (0.5.2-1) ... 236s Setting up r-bioc-s4vectors (0.44.0+dfsg-2) ... 236s Setting up r-cran-runit (0.4.33-1) ... 236s Setting up r-cran-futile.logger (1.4.3-4build1) ... 236s Setting up r-cran-waldo (0.6.1-2) ... 236s Setting up r-cran-later (1.4.1+dfsg-1) ... 236s Setting up r-cran-matrix (1.7-3-1) ... 236s Setting up r-cran-htmltools (0.5.8.1-1) ... 236s Setting up r-cran-tinytex (0.56-1) ... 236s Setting up r-cran-knitr (1.49+dfsg-1) ... 236s Setting up g++ (4:14.2.0-1ubuntu1) ... 236s update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode 236s Setting up r-cran-cachem (1.1.0-1) ... 236s Setting up r-cran-sass (0.4.9+dfsg-1) ... 236s Setting up build-essential (12.10ubuntu1) ... 236s Setting up r-bioc-preprocesscore (1.68.0+ds-2) ... 236s Setting up r-bioc-iranges (2.40.1-2) ... 236s Setting up r-cran-rcurl (1.98-1.16+dfsg-1) ... 236s Setting up r-cran-restfulr (0.0.15-1) ... 236s Setting up r-cran-vctrs (0.6.5-1) ... 236s Setting up r-cran-openssl (2.3.2+dfsg-1) ... 236s Setting up r-bioc-affyio (1.76.0-2) ... 236s Setting up r-bioc-s4arrays (1.6.0+dfsg-2) ... 236s Setting up r-bioc-biocparallel (1.40.0-2) ... 236s Setting up r-cran-callr (3.7.6-1) ... 236s Setting up r-bioc-rhtslib (3.2.0+dfsg-2) ... 236s Setting up r-cran-desc (1.4.3-1) ... 236s Setting up r-cran-fontawesome (0.5.3-1) ... 236s Setting up r-bioc-biocio (1.16.0+dfsg-2) ... 236s Setting up gfortran (4:14.2.0-1ubuntu1) ... 236s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode 236s update-alternatives: warning: skip creation of /usr/share/man/man1/f95.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f95) doesn't exist 236s update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode 236s update-alternatives: warning: skip creation of /usr/share/man/man1/f77.1.gz because associated file /usr/share/man/man1/gfortran.1.gz (of link group f77) doesn't exist 236s Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... 236s Setting up texlive-bibtex-extra (2024.20250114-1) ... 236s Setting up r-cran-httr (1.4.7+dfsg-1) ... 236s Setting up r-bioc-affy (1.84.0-2) ... 236s Setting up r-cran-memoise (2.0.1-1) ... 236s Setting up r-cran-covr (3.6.4+dfsg-1) ... 236s Setting up r-cran-promises (1.3.2+dfsg-1) ... 236s Setting up r-cran-blob (1.2.4-1) ... 236s Setting up r-bioc-xvector (0.46.0-2) ... 236s Setting up r-cran-pkgbuild (1.4.6-1) ... 236s Setting up r-cran-rsqlite (2.3.9-1) ... 236s Setting up r-cran-pkgload (1.4.0-1) ... 236s Setting up r-base-dev (4.4.3-1) ... 236s Setting up r-bioc-ucsc.utils (1.2.0+ds-2) ... 236s Setting up r-bioc-sparsearray (1.6.2+dfsg-1) ... 236s Setting up r-cran-httpuv (1.6.15+dfsg-1) ... 236s Setting up r-cran-testthat (3.2.3-1) ... 236s Setting up r-bioc-genomeinfodb (1.42.3+dfsg-1) ... 236s Setting up r-cran-bslib (0.8.0+dfsg-1) ... 236s Setting up pkg-r-autopkgtest (20231212ubuntu1) ... 236s Setting up r-bioc-delayedarray (0.32.0+dfsg-2) ... 236s Setting up r-bioc-genomicranges (1.58.0+dfsg-2) ... 236s Setting up r-bioc-biostrings (2.74.1+dfsg-2) ... 236s Setting up r-cran-shiny (1.10.0+dfsg-2) ... 236s Setting up r-cran-rmarkdown (2.29+dfsg-1) ... 236s Setting up r-bioc-rsamtools (2.22.0+dfsg-2) ... 236s Setting up r-cran-bookdown (0.42+dfsg-1) ... 236s Setting up r-bioc-summarizedexperiment (1.36.0+dfsg-2) ... 236s Setting up r-bioc-pwalign (1.2.0-2) ... 236s Setting up r-bioc-keggrest (1.46.0+dfsg-2) ... 236s Setting up r-bioc-annotationdbi (1.68.0-2) ... 236s Setting up r-bioc-biocstyle (2.34.0+dfsg-1) ... 236s Setting up r-bioc-genomicalignments (1.42.0-2) ... 236s Setting up r-bioc-rtracklayer (1.66.0-2) ... 236s Setting up r-bioc-genomicfeatures (1.58.0+dfsg-2) ... 236s Setting up r-bioc-bsgenome (1.74.0-2) ... 236s Processing triggers for libc-bin (2.41-1ubuntu2) ... 236s Processing triggers for man-db (2.13.0-1) ... 237s Processing triggers for install-info (7.1.1-1) ... 237s Processing triggers for tex-common (6.19) ... 238s Running updmap-sys. This may take some time... done. 238s Running mktexlsr /var/lib/texmf ... done. 238s Building format(s) --all. 286s This may take some time... done. 287s autopkgtest [17:46:04]: test pkg-r-autopkgtest: /usr/share/dh-r/pkg-r-autopkgtest 287s autopkgtest [17:46:04]: test pkg-r-autopkgtest: [----------------------- 287s Test: Try to load the R library Biostrings 287s 287s R version 4.4.3 (2025-02-28) -- "Trophy Case" 287s Copyright (C) 2025 The R Foundation for Statistical Computing 287s Platform: s390x-ibm-linux-gnu 287s 287s R is free software and comes with ABSOLUTELY NO WARRANTY. 287s You are welcome to redistribute it under certain conditions. 287s Type 'license()' or 'licence()' for distribution details. 287s 287s R is a collaborative project with many contributors. 287s Type 'contributors()' for more information and 287s 'citation()' on how to cite R or R packages in publications. 287s 287s Type 'demo()' for some demos, 'help()' for on-line help, or 287s 'help.start()' for an HTML browser interface to help. 287s Type 'q()' to quit R. 287s 287s > library('Biostrings') 287s Loading required package: BiocGenerics 287s 287s Attaching package: ‘BiocGenerics’ 287s 287s The following objects are masked from ‘package:stats’: 287s 287s IQR, mad, sd, var, xtabs 287s 287s The following objects are masked from ‘package:base’: 287s 287s anyDuplicated, aperm, append, as.data.frame, basename, cbind, 287s colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, 287s get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, 287s match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, 287s Position, rank, rbind, Reduce, rownames, sapply, saveRDS, setdiff, 287s table, tapply, union, unique, unsplit, which.max, which.min 287s 287s Loading required package: S4Vectors 287s Loading required package: stats4 288s 288s Attaching package: ‘S4Vectors’ 288s 288s The following object is masked from ‘package:utils’: 288s 288s findMatches 288s 288s The following objects are masked from ‘package:base’: 288s 288s expand.grid, I, unname 288s 288s Loading required package: IRanges 288s Loading required package: XVector 289s Loading required package: GenomeInfoDb 289s 289s Attaching package: ‘Biostrings’ 289s 289s The following object is masked from ‘package:base’: 289s 289s strsplit 289s 289s > 289s > 289s Other tests are currently unsupported! 289s They will be progressively added. 289s autopkgtest [17:46:06]: test pkg-r-autopkgtest: -----------------------] 290s pkg-r-autopkgtest PASS 290s autopkgtest [17:46:07]: test pkg-r-autopkgtest: - - - - - - - - - - results - - - - - - - - - - 290s autopkgtest [17:46:07]: @@@@@@@@@@@@@@@@@@@@ summary 290s pkg-r-autopkgtest PASS 296s nova [W] Using flock in prodstack6-s390x 296s Creating nova instance adt-plucky-s390x-r-bioc-biostrings-20250315-174117-juju-7f2275-prod-proposed-migration-environment-2-c02227f6-83cc-4357-bfb1-ab63f41dadd2 from image adt/ubuntu-plucky-s390x-server-20250315.img (UUID 3d3557fa-fd0f-4bba-9b89-8d5964e09f61)... 296s nova [W] Timed out waiting for 8874fd8b-3058-4493-8d86-b22154ba5b74 to get deleted.